Overview

Cancer genomics studies how mutations, gene expression, copy-number changes, and other molecular features shape tumor development, patient outcomes, and treatment response. Common approaches include statistical driver and mutation-signature analysis, multi-omics integration, and pathway or regulatory-network models, alongside machine learning on sequencing, pathology images, and scans. Researchers evaluate these methods on resources such as TCGA and clinical cohorts, with tasks including subtype classification, survival prediction, biomarker discovery, and drug response. A central challenge is making predictions that generalize across cancers and incomplete datasets while remaining biologically interpretable and reliable enough for clinical use.

Latest papers

CardsList

34 papers1 paper in the last four weeks, down 75% on the four weeks before. 0.0% of all new papers.

  1. Identifying Multi-Hit Cancer Drivers Without Massive Parallelization: A CP, MIP, and Column Generation Framework

    Feb 26, 2026Rick S. H. Willemsen, Tenindra Abeywickrama, Ramu AnandakrishnanCancer Genomics

  2. VAE-MS: An Asymmetric Variational Autoencoder for Mutational Signature Extraction

    Feb 24, 2026Ida Egendal, Rasmus Froberg Brøndum, Dan J Woodcock +2Cancer GenomicsVariational Autoencoders

  3. Cross-Cluster Weighted Forests

    May 17, 2021Maya Ramchandran, Rajarshi Mukherjee, Giovanni ParmigianiCancer GenomicsEnsemble Learning