Topological Data Analysis

We propose a multi-dimensional persistent sheaf Laplacian (MPSL) framework on simplicial complexes for image analysis. The proposed method is motivated by the strong sensitivity of commonly used dimensionality reduction techniques, such as principal component analysis (PCA), to the choice of reduced dimension. Rather than selecting a single reduced dimension or averaging results across dimensions, we exploit complementary advantages of multiple reduced dimensions. At a given dimension, image samples are regarded as simplicial complexes, and persistent sheaf Laplacians are utilized to extract a multiscale localized topological spectral representation for individual image samples. Statistical summaries of the resulting spectra are then aggregated across scales and dimensions to form multiscale multi-dimensional image representations. We evaluate the proposed framework on the COIL20 and ETH80 image datasets using standard classification protocols. Experimental results show that the proposed method provides more stable performance across a wide range of reduced dimensions and achieves consistent improvements to PCA-based baselines in moderate dimensional regimes.

Persistent entropy is a scalar summary of persistence barcodes widely used to detect regime changes, yet there is no account of when a structural change in a barcode must produce a detectable change in entropy. We establish a model-agnostic theorem supplying such conditions. Treating persistence diagrams as random objects indexed by a control parameter, we identify a dispersion-condensation mechanism in the normalized persistence weights and derive an explicit lower bound on the entropy difference between the two regimes, valid with high probability at finite sample size and insensitive to the absolute scale of bar lifetimes. We also give a procedure for verifying the hypotheses on empirical barcodes. Applied to convolutional networks, the criterion shows that the circular organization of learned filters reported by Gabrielsson and Carlsson emerges through a sharp topological phase transition, and locates its onset: within a few hundred iterations on MNIST, but an order of magnitude later on CIFAR-10. The same criterion detects the Kuramoto synchronization and Vicsek order-disorder transitions.

Ball Mapper summarizes a finite metric dataset by covering the sample with closed balls centered at selected landmarks and connecting landmarks whose balls share observations. Its construction therefore depends critically on repeated fixed radius range queries, yet the effect of replacing exact queries by approximate search has not been systematically characterized. We formulate Ball Mapper through an abstract range query procedure that separates the mathematical construction from the search backend used to realize it. Under fixed ordering, exact procedures preserve the landmark sequence, cover, graph, and membership-based colorings. For approximate procedures, we derive deterministic bounds on covering radius and landmark separation under additive and multiplicative query errors, prove inclusions for the induced nerve, characterize edge survival through witness redundancy for conservative approximations, and bound perturbations of mean vertex colorings. The accompanying implementation provides independent exact reference backends together with exhaustive and approximate search methods under a common closed ball convention. Experiments on Gaussian, mixture, and noisy curve data across three seeds show that approximation fidelity depends strongly on geometry and that edges supported by multiple witnesses are substantially more robust to missed memberships. At 20,000 observations, the approximate indexes did not outperform exhaustive FAISS Flat search. The results therefore establish a framework for controlled approximation rather than a universal speed advantage, and identify the geometric and combinatorial quantities that govern when approximate range search preserves the Ball Mapper summary.

We introduce a data-analysis framework based on filtrations of finite topological spaces. Starting from a finite metric data set, we construct a sequence of coarsening topologies on the same set of points. These topologies give persistence modules and barcodes in the usual way, but they also retain information that is lost when the filtration is reduced to homology. At each level one can examine, for example, which points are topologically indistinguishable, how their minimal neighbourhoods overlap, how connected components merge, and how these features change from one level to the next. We develop the basic theory of these filtrations, establish stability results under suitable hypotheses, and give practical constructions starting directly from a distance matrix. We then study what can be learned from the resulting finite topologies. On synthetic data with known clusters of different shapes, sizes, and densities, we examine how these regions appear among the finite-topological structures and how they merge as the topology coarsens. We also study what happens when points that become uncovered early in the construction are removed and the analysis is repeated. For one-dimensional homology, we use paths in the finite-topological structure to locate cycles and to examine how their appearance is related to the geometry of the data. We finally apply these ideas to two real data sets with quite different structures. On the Paul15 single-cell data, we use the evolving finite topology to examine fine cellular states, their overlaps and relations, their assembly into larger groups, and the effect of removing points that connect these structures. On COIL20, where images of an object are sampled through a full rotation, we study how the cyclic organization of the images is reflected in the finite-topological evolution and in the associated one-dimensional homology.

Studying the shape of text embedding spaces enhances our understanding of model behavior and how geometry affects downstream task performance. While a range of topological and geometric metrics have been explored, they are typically analyzed in isolation, and the connections between them remain largely unknown. In this paper, we present Unified Topological Signatures (UTS) for characterizing the structure of embedding spaces. We evaluate our method across a wide range of text embedding models and retrieval datasets, finding that it outperforms individual metrics in downstream performance prediction. Through several experiments, we demonstrate that the signatures characterize embedding spaces more accurately, improve the prediction of model-specific properties and biases, and reveal novel insights into representational similarity that challenge the global claims of the Platonic Representation Hypothesis.

We propose persistent discrete homology as a tool for topological data analysis and discuss its advantages over the existing methods. In particular, we provide empirical evidence that persistent discrete homology is more noise-resistant than persistent homology of the Vietoris-Rips complex for data coming from non-metric settings.

In artificial-intelligence-aided signal processing, existing deep learning models often exhibit a black-box structure. Here, conceptually beyond spectral analysis, we demonstrate that topological methods not only effectively capture intrinsic and complex structural information but can also enhance neural networks. We provide a transparent methodology, TopCap, to capture topological features inherent in time series for basic machine learning. Compared to prior approaches, we obtain descriptors that probe finer information such as the vibration of a time series. Notably, in classifying voiced and voiceless consonants, TopCap achieves an accuracy consistently standing in comparison with neural network models. Moreover, by integrating TopCap features into those neural networks, our approach improves upon state-of-the-art methods in terms of robustness against noise, as well as accuracy, stability, convergence of loss function, and interpretability.