As large language model (LLM) based systems take on high-stakes roles in real-world decision-making, they must reconcile competing instructions from multiple sources within a single prompt context. Enforcing an instruction hierarchy, where higher-level directives override lower-priority requests, is critical to the reliability and control of LLMs. In this work, we reframe instruction hierarchy resolution as a reasoning task. The model must first "think" about the relationship between a given user prompt and higher-priority instructions before generating a response. To enable this capability, we construct VerIH, a training dataset of constraint-following tasks with verifiable answers, comprising aligned and conflicting system-user instructions. We show that lightweight reinforcement learning with VerIH effectively transfers general reasoning capabilities of models to instruction prioritization. Our method leads to consistent improvements across multiple model families on both instruction following and instruction hierarchy benchmarks, achieving ~20% absolute improvement in conflict setups. Our method also leads to improved alignment to safety-critical scenarios beyond the training distribution, exhibiting increased robustness against jailbreak and prompt injection, reducing absolute attack success rates by up to 20%. Our results establish reasoning over instruction hierarchies as a practical mechanism for improving AI reliability, where targeted updates to system prompts produce predictable, controllable, and robust changes in model behavior.
Instruction hierarchies are a core safety assumption of language model deployment: higher priority inputs, such as system prompts, should override conflicting lower priority inputs from users or tools. Yet frontier LLMs often violate this hierarchy. We introduce V-Steer, a training-free inference time method that restores privileged influence by editing cached value vectors at prompt positions. Using direct logit attribution on the first next token prediction, V-Steer identifies heads where lower priority spans dominate privileged ones, then boosts privileged spans and suppresses conflicting lower priority spans through in-place multiplicative edits to cached V tensors. Since the method acts only on cached values, it remains compatible with fused attention backends and adds only a one time prefill overhead. Across models from 7B to 70B, this attribution guided intervention raises primary constraint accuracy from under 18% up to 92% on controlled role conflict benchmarks, and on broader instruction hierarchy evaluations substantially outperforms prompt only baselines while matching or exceeding SoTA training based methods on 3 of 4 scales of LLMs, with negligible decoding-speed overhead. The code is available at https://github.com/cindy2000sh/v-steer.
Reasoning language models deployed in agentic workflows must follow an instruction hierarchy: when instructions from different sources conflict, the model should obey the highest-privilege applicable instruction. Existing benchmarks largely measure this behavior end-to-end, asking whether the final response is compliant. However, a non-compliant response can arise from several distinct failures: the model may fail to identify the relevant instructions in context, fail to resolve conflicts among identified instructions, or correctly resolve the conflict in its reasoning while still producing a violating response. We introduce a white-box diagnostic framework that localizes instruction hierarchy failures into instruction identification, conflict resolution, and response realization, making failures more interpretable. We evaluate three reasoning models--Gemma-4-31B-IT, Qwen3.6-35B-A3B, and Claude Sonnet 4.6--on long-context adaptations of IHEval and IHChallenge, and find that the dominant failure mode varies across models, tasks, and context length. Building on the observation that models can often detect conflicts and output violations when explicitly prompted, we propose two training-free self-monitoring mechanisms: a parallel input monitor for low-latency conflict detection before generation, and a sequential output monitor for response-level review and repair. Across Gemma-4-31B-IT, Claude Sonnet 4.6, and GPT-5.3, the strongest monitor reduces rule-following non-compliance by 81-99%, with GPT-5.3 reductions of 86% under static attacks and 45% under adaptive attacks.
Large Language Models (LLMs) often fail to maintain instruction hierarchies (IH) when processing multi-source inputs with varying role-level priorities, paradoxically adhering to lower-priority directives during conflicts. While existing defenses mitigate this issue, they are largely restricted to single-turn scenarios and require expensive fine-tuning. In this paper, we formalize this failure mode in multi-turn contexts via a Jensen-Shannon Divergence (JSD) framework, uncovering a pervasive role-influence inversion phenomenon where subordinate inputs override superior roles. To rectify this without training, we propose IHDec (Instruction Hierarchy-steered Decoding). IHDec leverages JSD to automatically detect token-level hierarchy violations and dynamically executes contrastive decoding to suppress misaligned subordinate roles. Extensive evaluations demonstrate that IHDec outperforms training-based baselines in multi-turn conflicts while fully preserving general response quality. Furthermore, IHDec strengthens safety against adversarial prompt injections and exhibits a robust scaling synergy with larger models. The Code is available at https://github.com/nxcolelxu/IHDec.git