Constitution-conditioned post-training can be analysed as a structured perturbation of a model's learned representational geometry. We introduce ATLAS, a geometry-first program that traces constitution-induced hidden-state structure across charts, models, and substrates. Instead of treating the relevant unit as a single behaviour, neuron, vector, or patch, ATLAS tests a local chart whose tangent structure, occupancy distribution, and behavioural coupling can be measured under system change. On Gemma, the anchored source-local chart captures 310 / 320 reviewed source rows and all 84 / 84 reviewed score-flip rows, but compact exact-patch sufficiency does not close, so the exportable unit is the broader source-defined family. Freezing that family, we re-identify a target-local realisation in an unadapted Phi model, where the fully adjudicated confirmatory contrast separates with AUC 0.984 and mean gap 5.50. In held-out ALM8 mouse frontal-cortex perturbation data, the same source-defined family receives support across 5/5 folds, with mean held-out AUC 0.72 and mean fold gap 4.50. A multiple-choice analysis provides the main boundary: nearby target-local signals can appear without source-faithful closure. The resulting correspondence is not coordinate identity, site identity, or a target-side mediation theorem. It is geometric recurrence under redistribution: written constitutions can induce recoverable latent geometry whose organisation remains detectable across model and substrate changes while its local coordinates, occupancy, and behavioural expression shift.
Post-training can substantially alter language-model behavior, yet aggregate behavior rates do not reveal whether training removes an existing mechanism, creates a new one, or changes how an inherited mechanism is used. We study this question through two mechanistically distinct failures, repetition as a decoding-attractor pathology and sycophancy as a preference-related alignment failure. We introduce behavioral manifold analysis, which isolates behavior-specific geometry by selecting sparse behavior-associated coordinates and lifting them into low-dimensional local charts. We construct these charts in two complementary spaces. ACT captures runtime activation states, while NOC quantifies how strongly the model routes functional information flow through the shared behavior-associated subspace. Across multiple model families, the resulting charts are highly compressed and partially alignable across architectures. Contribution-space charts expose a more architecture-robust shared core, whereas activation-space charts retain stronger family-specific structure. Tracking these charts through controlled post-training reveals a consistent asymmetry. Supervised fine-tuning substantially alters the inherited behavioral geometry, whereas reward optimization changes behavior while largely preserving the underlying chart. This geometric perspective provides a unified framework for understanding the mechanistic distinction between the two objectives. SFT tends to rewrite behavioral geometry, whereas reward optimization primarily reweights it. Code is available at https://github.com/ronglingze/Manifold-Analysis
Language models exhibit strong robustness to paraphrasing, suggesting that semantic information may be encoded through stable internal representations, yet the structure and origin of such invariance remain unclear. We propose a local geometric framework in which semantically equivalent inputs occupy structured regions in latent space, with paraphrastic variation along nuisance directions and semantic identity preserved in invariant subspaces. Building on this view, we make three contributions: (1) a geometric characterization of invariant latent features, (2) a contrastive subspace discovery method that separates semantic-changing from semantic-preserving variation, and (3) an application of invariant representations to zero-shot model attribution. Across models and layers, empirical results support these contributions. Invariant structure emerges in specific depth regions, semantic displacement lies largely outside the nuisance subspace, and representation-level interventions indicate a causal role of invariant components in model outputs. Invariant representations also capture model-specific geometric patterns, enabling accurate attribution. These findings suggest that semantic invariance can be viewed as a local geometric property of latent representations, offering a principled perspective on how language models organize meaning.
Preference alignment has substantially improved the observable behavior of large language models, yet it remains unclear what alignment changes internally. Aligned systems still fail under jailbreaks, prompt injection, and retrieval-time corruption, suggesting behavior-level evaluation alone is incomplete. Post-training should leave measurable traces in internal computation. We ask: when an instruction-tuned (IT) model becomes a preference-aligned (PA) model, what geometric structure changes, where do those changes concentrate, and how selectively do they vary across concepts, prompts, and model families? We introduce MENTIS, a geometry-first framework for measuring alignment-induced internal reorganization in paired checkpoints. MENTIS compares IT and PA models using a primary layerwise covariance-based torsion norm (T1), a secondary spectral torsion diagnostic (T2), and an Energy-Radiance-Activation measure (ERA) for depth localization. Across four 7-8B model pairs on LITMUS, our study reveals that alignment-induced change is selective rather than uniform: normative concepts exhibit larger torsion shifts than factual concepts on average; torsion is negatively correlated with contextual entropy; and peak effects localize to architecture-specific mid-to-late layers. The same pattern appears across word-level, prompt-level, and model-level analyses. These results suggest preference alignment leaves structured, depth-localized geometric signatures in internal computation beyond what behavior-level evaluation alone can reveal.