MMClima: A Framework for Multimodal Climate Science Data and Evaluation

Climate research is pivotal for mitigating global environmental crises, yet the accelerating volume of multi-scale datasets and the complexity of analytical tools have created significant bottlenecks, constraining scientific discovery to fragmented and labor-intensive workflows. While the emergence Large Language Models (LLMs) offers a transformative paradigm to scale scientific expertise, existing explorations remain largely confined to simple Question-Answering (Q&A) tasks. These approaches often oversimplify real-world challenges, neglecting the intricate physical constraints and the data-driven nature required in professional climate science.To bridge this gap, we introduce ClimAgent, a general-purpose autonomous framework designed to execute a wide spectrum of research tasks across diverse climate sub-fields. By integrating a unified tool-use environment with rigorous reasoning protocols, ClimAgent transcends simple retrieval to perform end-to-end modeling and analysis. To foster systematic evaluation, we propose ClimaBench, the first comprehensive benchmark for real-world climate discovery. It encompasses challenging problems spanning 5 distinct task categories derived from professional scenarios between 2000 and 2025. Experiments on ClimaBench demonstrate that ClimAgent significantly outperforms state-of-the-art baselines, achieving a 40.21% improvement over original LLM solutions in solution rigorousness and practicality. Our code are available at https://github.com/usail-hkust/ClimAgent.

Despite rapid progress in large language models (LLMs), current QA benchmarks still overlook the core challenge of real-world scientific information seeking: synthesizing multimodal evidence scattered across multiple documents and structural formats. Existing QAs remain narrow in scope, relying on unimodal text and short-span reasoning that fail to capture the complexity of real information-seeking. We introduce DocHop-QA, a benchmark of 11,379 instances for evaluating multimodal, multi-document, multi-hop scientific QA. Built from publicly available PubMed articles, DocHop-QA incorporates textual passages, tables, and layout cues, enabling cross-document inference without explicit hyperlinks. To scale realistic QA construction, we develop an LLM-driven generation pipeline grounded in 11 scientific reasoning concepts, producing diverse and coherent question-answer pairs. To highlight the utility and versatility of the dataset, we propose a task-driven evaluation framework spanning four settings, including generative answering, multimodal evidence integration and structured index prediction. Experiments show that current models struggle with DocHop-QA's long-context, multi-evidence demands, establishing it as a rigorous testbed for advancing next-generation scientific QA systems.

Scientific discovery is increasingly shifting from isolated disciplines to multi-domain reasoning, and AI for science faces a similar transition. Existing systems are either specialised for individual domains or unify scientific data mainly through text tokenisation and prompt-based interfaces, limiting their ability to handle diverse scientific inputs, produce modality-native outputs, and support joint understanding, reasoning, and generation across scientific domains. We introduce MKB, a unified scientific multimodal model for both understanding and generation, built around a shared Transformer backbone and modality-tailored encoders, adapters, and decoders. MKB covers six scientific branches, including DNA, RNA, proteins, small molecules, earth science, and medical images, and supports native outputs such as biological sequences, molecular strings, meteorological fields, and segmentation masks. Training follows a two-stage modality-then-language curriculum: Stage 1 aligns modality-specific components with the frozen backbone, and Stage 2 consolidates them with the language backbone using mixed scientific and general corpora. Experiments show that MKB achieves competitive scientific understanding across biological and molecular benchmarks, produces high-fidelity native outputs for weather forecasting, biological generation, and medical-image segmentation, and largely retains the general capabilities of its Qwen3-VL backbone. These results demonstrate the feasibility of the proposed paradigm, suggesting that shared-backbone models with modality-tailored components can provide a promising foundation for future cross-domain scientific multimodal exploration. The model and code are publicly available at https://github.com/Shanghai-Academy-of-AI-For-Science/MKB and https://huggingface.co/sais-org/MKB.