Medical Named Entity Recognition (NER) for low-resource languages remains a challenging task due to high linguistic variability and a scarcity of domain-specific annotated corpora. This work presents a comprehensive empirical benchmark evaluating three fine-tuned transformer encoders-BanglaBERT, multilingual BERT (mBERT), and XLM-RoBERTa-against GPT-4o mini under zero-shot and few-shot prompting configurations for Bangla medical NER. In contrast to prior studies that evaluated large language models on limited subsets of only 50 samples, we conduct a large-scale evaluation across the full test set of 3,179 samples, providing statistically robust and reproducible baselines. Our fine-tuned XLM-RoBERTa model achieves an F1- score of 0.5959, establishing a new state-of-the-art and surpassing the previously reported best result of 0.5848. Crucially, we demonstrate that the language-specific BanglaBERT model consistently underperforms its multilingual counterparts with an F1-score of 0.4937, indicating that pretraining domain diversity can outweigh language specificity in highly specialized clinical settings. Furthermore, we present a detailed per-entity-type analysis for this task, revealing that Medicine and Specialist categories are recognized with high reliability, achieving F1- scores above 0.83, while the Symptom category remains the most challenging with an F1-score of 0.4367 despite being the most frequent training class. Finally, fine-tuned transformer models outperform the optimal prompting configuration by a factor of 3.76, confirming that prompt-only pipelines remain inadequate for structured clinical entity extraction in low-resource language environments.
MedER refers to the identification of medical entities. It is crucial for extracting structured clinical information from unstructured medical text. Many existing systems rely on transformer-based models, which are computationally expensive and difficult to deploy in resource-constrained environments. Furthermore, earlier works often use relaxed evaluation metrics that artificially inflate performance by rewarding correct prediction of dominant "Outside" (O) tokens. In this paper, we propose a lightweight Medical Entity Recognition (MedER) framework for the Bangla language. We establish a rigorous baseline using a 12-layer BanglaBERT model combined with a Conditional Random Field (CRF) layer for exact-boundary entity detection. To address deployment constraints, we compress this teacher model into a 4-layer student network through Knowledge Distillation (KD), where the student learns from the teacher's pre-CRF soft emission logits. Finally, we apply INT8 dynamic quantization to further reduce model size and inference cost. Our final quantized student achieves an 8.6x CPU speedup while requiring nearly 48 percent less storage than the CRF teacher model.
Recent advancements in Large Language Models (LLMs) and Large Vision Language Models (LVLMs) have enabled general-purpose systems to demonstrate promising capabilities in complex reasoning tasks, including those in the medical domain. Medical Visual Question Answering (MedVQA) has particularly benefited from these developments. However, despite Bangla being one of the most widely spoken languages globally, there exists no established MedVQA benchmark for it. To address this gap, we introduce BanglaMedVQA, a dataset comprising clinically validated image-question-answer pairs, along with a comprehensive evaluation of current foundation models on this resource. Consistent with prior findings that report low performance of current models on English MedVQA benchmarks, our analysis reveals that Bangla performance is substantially lower, reflecting the challenges inherent to low-resource languages. Even top-performing models such as Gemini and GPT-4.1 mini fail to accurately answer specialized diagnostic questions, indicating severe limitations in fine-grained medical reasoning. Although certain open-source models, such as Gemma-3, occasionally outperform these models in general categories, they too struggle with clinically complex questions, underscoring the urgent need for top-notch evaluation method.
Rafid Ahmed, Intesar Tahmid, Mir Sazzat Hossain +3
Named Entity Recognition (NER) for low-resource languages such as Marathi remains a challenging task due to limited annotated resources and linguistic complexity. Although recent Large Language Models (LLMs) have demonstrated strong performance across a wide range of natural language processing tasks, their effectiveness for language-specific NER in low-resource settings remains uncertain. In this study, we fine-tune MahaBERT-v2 on different variants of the MahaNER dataset and systematically compare the performance of these models with an existing MahaNER baseline and prominent general-purpose LLMs, including Gemini, LLaMA-3.3-70B, and Gemma models. All models are evaluated on a Marathi NER test dataset using standard metrics of precision, recall, and F1-score. The experimental results show that the fine-tuned MahaBERT-based models consistently outperform both the baseline and all evaluated LLMs, with the fine-tuned models achieving F1-scores ranging from 0.88 to 0.91, surpassing the existing MahaNER model (0.8843) and significantly exceeding the performance of LLM-based approaches, whose F1-scores range from 0.57 to 0.69. These findings demonstrate that task-specific, language-focused models trained on domain-relevant data remain more effective than general-purpose LLMs for Marathi NER, highlighting the continued importance of specialized architectures for low-resource language processing.