| Method | PubMed | Computer | Photo | WikiCS | Airport | Disease | CS | ogbn-arxiv |
| ( δ=3.5 ) | ( δ=1.5 ) | ( δ=2.5 ) | ( δ=1.5 ) | ( δ=1.0 ) | ( δ=0.0 ) | ( δ=2.0 ) | ( δ=2.5 ) |
| GCN (2017) | 78.45±0.36 | 90.17±0.69 | 92.84±0.25 | 74.29±1.06 | 83.19±1.76 | 79.73±1.88 | 93.10±0.14 | 68.36±0.28 |
| GraphSAGE (2017) | 76.88±0.56 | 89.38±0.98 | 91.27±2.44 | 74.22±1.36 | 88.55±0.84 | 75.29±2.76 | 92.55±0.19 | 66.86±0.50 |
| GAT (2018) | 77.23±0.51 | 91.16±0.55 | 92.70±0.51 | 76.55±0.88 | 86.10±1.39 | 80.25±0.54 | 93.12±0.15 | 68.05±0.30 |
| HGNN (2019) | 76.94±1.12 | 91.35±0.63 | 91.82±0.35 | 74.89±0.42 | 84.87±2.09 | 82.16±1.41 | 94.63±0.09 | 67.34±0.40 |
| HGCN (2019) | 77.03±0.49 | 90.58±0.21 | 93.19±0.29 | 76.67±0.44 | 88.82±1.66 | 89.36±1.02 | 94.24±0.17 | 65.32±0.25 |