Agronomic Characterization and Time-Series UAV Phenotyping to Support Field Pea Breeding in Iowa

Maize kernel traits such as row number, kernels per row, and kernel size vary largely for genetic reasons and are consistently associated with regions of the genome that influence yield. Manual measurement of these traits, however, cannot keep pace with the volume of maize generated in a breeding program. To address this, we developed and validated a fully automated pipeline for extracting these traits from 3D point clouds of corn ears, built on a recently developed video-to-point-cloud platform. Raw video frames are processed through COLMAP and NeRF, the ear is isolated via density-based separation, and the point cloud is distance-calibrated to physical units. The calibrated ear point cloud was Z-axis aligned via PCA and cylindrically unwrapped to a 2D image. We enhanced contrast and performed zero-fine-tuning instance segmentation using Cellpose-SAM. A triple-juxtaposed unwrap strategy was used to prevent double-counting at the seam. The pipeline achieved kernel count R^2 = 0.921 (MAPE = 10.33%) and kernel row number within +-2 rows for 95.2% of ears (MAE = 0.75 rows) on a 168-ear held-out set from the 268-ear labeled dataset. The resulting multi-trait dataset has known genotype identity for each ear, positioning it for phenotype-to-genotype association analyses.

We present a large-scale unmanned aerial vehicle (UAV)-based RGB and multispectral image dataset collected over paddy fields in the Vijayawada region, Andhra Pradesh, India, covering nursery to harvesting stages. We used a 20-megapixel RGB camera and a 5-megapixel four-band multispectral camera capturing red, green, red-edge, and near-infrared bands. Standardised operating procedure (SOP) and checklists were developed to ensure repeatable data acquisition. Our dataset comprises of 42,430 raw images (415 GB) captured over 5 acres with 1 cm/pixel ground sampling distance (GSD) with associated metadata such as GPS coordinates, flight altitude, and environmental conditions. Captured images were validated using Pix4D Fields to generate orthomosaic maps and vegetation index maps, such as normalised difference vegetation index (NDVI) and normalised difference red-edge (NDRE) index. Our dataset is one of the few datasets that provide high-resolution images with rich metadata that cover all growth stages of Indian paddy crops. The dataset is available on IEEE DataPort with DOI, . It can support studies on targeted spraying, disease analysis, and yield estimation.

Weed pressure in forage corn production causes yield losses of up to 31.5%, yet site-specific weed management (SSWM) systems built on UAV imagery and deep learning remain constrained by the scarcity of field-representative training datasets. We present USU-Corn-WeedDB, a publicly available UAV RGB image dataset collected from a commercial forage corn field in Cache Valley, Utah, designed to support multi-class weed detection under both supervised and semi-supervised learning frameworks. RGB imagery was acquired on 27 June 2025 using an Autel EVO II Dual 640T V2 drone at ~10m above ground level, yielding a ground sampling distance of approximately 0.48 cm/pixel. A total of 366 full-resolution images were tiled into 8,800 patches at 640 x 640-pixel resolution. Of these, 800 images were manually annotated for three weed species; common lambsquarters (Chenopodium album), redroot pigweed (Amaranthus retroflexus), and green foxtail (Setaria viridis) comprising 10,539 bounding-box instances, with the remaining 8,000 tiles retained as an unlabeled pool for semi-supervised experiments. This dataset reflects a natural class imbalance where redroot pigweed constitutes 53.86% of annotated instances, which was preserved intentionally to mirror real field conditions. To validate dataset utility, we trained 28 object detection models spanning five architecture families including YOLOv8, YOLOv9, YOLOv10, YOLO11, YOLO26, and RT-DETR under identical conditions without hyperparameter tuning. Test set [email protected] ranged from 0.773 to 0.840, with lightweight models achieving competitive performance relevant to edge-deployed UAV systems. USU-Corn-WeedDB is publicly available at https://doi.org/10.5281/zenodo.20044178.