Causal Representation Learning

Edge classification, a crucial task for graph applications, remains relatively under-explored compared to link prediction. Current methods often overlook the potential causal influences of node features on edge features, leading to a loss of relevant prior information. In this work, we present an empirical exploration using the Causal Edge Classification Framework (CECF). Unlike conventional causal inference methods, CECF is the first framework to apply causal inference principles to the edge classification task and to explore modeling edge features as a high-dimensional treatment within a causal framework. Based on the node embedding of Graph Neural Network (GNN), CECF seeks to learn a balanced representation of high-dimensional edge features by mitigating the potential influence of node features. Then, a cross-attention network captures the complex dependencies between node and edge features for final edge classification. Extensive experiments demonstrate that CECF not only achieves superior performance but also serves as a flexible, plug-and-play enhancement for existing methods. We also provide empirical analyses, offering insights into when and how this high-dimensional causal modeling framework works for the edge classification.

Causal representation learning aims to recover the latent causal variables and their causal relations, typically represented by directed acyclic graphs (DAGs), from low-level observations such as image pixels. A prevailing line of research exploits multiple environments, which assume how data distributions change, including single-node interventions, coupled interventions, or hard interventions, or parametric constraints on the mixing function or the latent causal model, such as linearity. Despite the novelty and elegance of the results, they are often violated in real problems. Accordingly, we formalize a set of desiderata for causal representation learning that applies to a broader class of environments, referred to as general environments. Interestingly, we show that one can fully recover the latent DAG and identify the latent variables up to minor indeterminacies under a nonparametric mixing function and nonlinear latent causal models, such as additive (Gaussian) noise models or heteroscedastic noise models, by properly leveraging sufficient change conditions on the causal mechanisms up to third-order derivatives. These represent, to our knowledge, the first results to fully recover the latent DAG from general environments under nonparametric mixing. Notably, our results match or improve upon many existing works, but require less restrictive assumptions about changing environments.

Remote Photoplethysmography (rPPG) enables convenient non-contact physiological measurement. Existing Self-Supervised Learning (SSL) methods commonly fall into a correlation trap: they tend to learn the most dominant periodic signals in the data, such as high-energy motion or illumination noise, rather than the faint, true rPPG signal, leading to poor model generalization. To address this, we propose a new SSL paradigm, Physiological Causal Probing (PCP), which treats the latent rPPG signal as the underlying physical source and the resulting pixel chrominance variations as its visual manifestation. Its core idea is to shift from passive correlation learning to active, precise intervention: it intervenes on the video based on a proposed rPPG hypothesis, and verifies whether the post-intervention changes match physical expectations. We propose the Interv-rPPG framework to implement PCP: an rPPG extractor named PhysMambaFormer hypothesizes the rPPG signal, while a Controllable Physiological Signal Editor conducts precise chrominance-domain interventions on videos based on this hypothesis. Interv-rPPG validates the physical realism of the hypothesis through Falsifiability via Nulling' and Axiomatic Equivariance'. Our editor achieves precise editing of the rPPG signal by intervening in the low-frequency chrominance components of the video. Our method improves both in-domain and cross-domain performance on challenging datasets such as VIPL-HR and MMPD. Furthermore, it surpasses the supervised baseline in complex cross-dataset settings, while remaining competitive on clean datasets where the intervention mechanism may introduce slight residual chrominance noise. Extensive experiments, including diagnostic analysis of nuisance sensitivity, demonstrate that the PCP paradigm effectively resists motion and illumination artifacts.

Heterophily is a prevalent property of real-world graphs and is well known to impair the performance of homophilic Graph Neural Networks (GNNs). Prior work has attempted to adapt GNNs to heterophilic graphs through non-local neighbor extension or architecture refinement. However, the fundamental reasons behind misclassifications remain poorly understood. In this work, we take a novel perspective by examining recurring inductive subgraphs, empirically and theoretically showing that they act as spurious shortcuts that mislead GNNs and reinforce non-causal correlations in heterophilic graphs. To address this, we adopt a causal inference perspective to analyze and correct the biased learning behavior induced by shortcut inductive subgraphs. We propose a debiased causal graph that explicitly blocks confounding and spillover paths responsible for these shortcuts. Guided by this causal graph, we introduce Causal Disentangled GNN (CD-GNN), a principled framework that disentangles spurious inductive subgraphs from true causal subgraphs by explicitly blocking non-causal paths. By focusing on genuine causal signals, CD-GNN substantially improves the robustness and accuracy of node classification in heterophilic graphs. Extensive experiments on real-world datasets not only validate our theoretical findings but also demonstrate that our proposed CD-GNN outperforms state-of-the-art heterophily-aware baselines.

Multimodal affective computing aims to predict humans' sentiment, emotion, intention, and opinion using language, acoustic, and visual modalities. However, current models often learn spurious correlations that harm generalization under distribution shifts or noisy modalities. To address this, we propose a causal modality-invariant representation (CmIR) learning framework for robust multimodal learning. At its core, we introduce a theoretically grounded disentanglement method that separates each modality into causal invariant representation' and environment-specific spurious representation' from a causal inference perspective. CmIR ensures that the learned invariant representations retain stable predictive relationships with labels across different environments while preserving sufficient information from the raw inputs via invariance constraint, mutual information constraint, and reconstruction constraint. Experiments across multiple multimodal benchmarks demonstrate that CmIR achieves state-of-the-art performance. CmIR particularly excels on out-of-distribution data and noisy data, confirming its robustness and generalizability.

Randomized controlled trials (RCTs) are the gold standard for estimating treatment effects, yet they are often underpowered for detecting effect heterogeneity. Large observational studies (OS) can supplement RCTs for conditional average treatment effect (CATE) estimation, but a key barrier is covariate mismatch: the two sources measure different, only partially overlapping, covariates. We propose CALM (Calibrated ALignment under covariate Mismatch), which learns embeddings that map each source's features into a common representation space. OS outcome models are transferred to the RCT embedding space and calibrated using trial data, preserving causal identification from randomization. Finite-sample risk bounds decompose into alignment error, outcome-model complexity, and calibration complexity terms, making explicit when the learned embedding is accurate enough to reduce variance. We instantiate CALM in two forms: a closed-form linear version, CALM-Lin, and a neural representation-learning version, CALM-NN. Across 51 simulation settings, calibration-based linear methods are effectively tied in linear-CATE regimes, while CALM-NN wins all 22 nonlinear-CATE settings by wide margins. Moreover, on two real-data studies CALM-NN delivers the largest gains over the trial-only baseline.

Conventional image denoising models often inadvertently learn spurious correlations between environmental factors and noise patterns. Moreover, due to high-frequency ambiguity, they struggle to reliably distinguish subtle textures from stochastic noise, resulting in over-removed details or residual noise artifacts. We therefore revisit denoising via causal intervention, arguing that purely correlational fitting entangles intrinsic content with extrinsic noise, which directly degrades robustness under distribution shifts. Motivated by this, we propose the Teacher-Guided Causal Disentanglement Network (TCD-Net), which explicitly decomposes the generative mechanism via structured interventions on feature spaces within a Vision Transformer framework. Specifically, our method integrates three key components: (1) An Environmental Bias Adjustment (EBA) module projects features into a stable, de-centered subspace to suppress global environmental bias (de-confounding). (2) A dual-branch disentanglement head employs an orthogonality constraint to force a strict separation between content and noise representations, preventing information leakage. (3) To resolve structural ambiguity, we leverage Nano Banana Pro, Google's reasoning-guided AI image generation model, to guide a causal prior, effectively pulling content representations back onto the natural-image manifold. Extensive experiments demonstrate that TCD-Net outperforms mainstream methods across multiple benchmarks in both fidelity and efficiency, achieving a real-time speed of 104.2 FPS on a single RTX 5090 GPU.

Temporal causal representation learning methods assume that causal mechanisms switch instantaneously between discrete domains, yet real-world systems often exhibit continuous mechanism transitions. For example, a vehicle's dynamics evolve gradually through a turning maneuver, and human gait shifts smoothly from walking to running. We formalize this setting by modeling transitional mechanisms as convex combinations of finitely many atomic mechanisms, governed by time-varying mixing coefficients. Our theoretical contributions establish that both the latent causal variables and the continuous mixing trajectory are jointly identifiable. We further propose TRACE, a Mixture-of-Experts framework where each expert learns one atomic mechanism during training, enabling recovery of mechanism trajectories at test time. This formulation generalizes to intermediate mechanism states never observed during training. Experiments on synthetic and real-world data demonstrate that TRACE recovers mixing trajectories with up to 0.99 correlation, substantially outperforming discrete-switching baselines.

We treat the internals of generative models as mechanistic objects rather than black boxes. We introduce \textbf{Attribution Graphs} (AGs), which extend GradCAM++ to circuit-level representations, and \textbf{Causal Probing}, a do-calculus intervention method for identifying causal latent structures, enabling detection and correction of spurious correlations, demographic biases, and misaligned decision circuits during training. We further propose the \textbf{Cognitive Alignment Score (CAS)}, quantifying agreement between model-internal representations and human concepts, a \textbf{saliency-first privacy mechanism} sharing only thresholded attribution nodes, a bias-aware regularizer aligning subgroup statistics, and a Reveal-to-Revise loop integrating attribution signals into parameter updates without separate fine-tuning. Evaluated on CelebA, FairFace, Jigsaw, and HateXplain, our method achieves \textbf{94.1%} accuracy, \textbf{92.3%} macro F1, \textbf{79.4%} IoU-XAI, and \textbf{12.7} FID at 72--76% adversarial robustness, while reducing subgroup disparity $Δ_{\mathrm{bias}}$ by \textbf{41%}, demonstrating that mechanistic interpretability, fairness, and generative performance can be jointly optimized.

We evaluate methods for causal representation learning (CRL) on a simple, real-world system that satisfies the basic problem setup of CRL. The system consists of a controlled optical experiment producing a variety of measurements where the underlying causal factors---the control inputs to the experiment---are known, providing a ground truth. We select methods representative of different approaches to CRL and find that they all fail to consistently recover the underlying causal factors. To understand the failure modes of the evaluated algorithms, we perform an ablation on the data by substituting the real data-generating process with a simpler synthetic equivalent. The results reveal a reproducibility problem, as most methods already fail on this synthetic ablation despite its simple data-generating process. Additionally, we observe that common assumptions on the mixing function are crucial for the performance of some of the methods but do not hold in the real data. Our efforts highlight the contrast between the theoretical promise of the state of the art and the challenges in its application. We hope the benchmark serves as a simple, real-world sanity check to further develop and validate methodol- ogy, bridging the gap towards CRL methods that work in practice.

Continuous-Time Dynamic Graphs (CTDGs) enable fine-grained modeling of evolving relational systems. However, most existing CTDG representation learning methods are tailored to in-distribution settings and exhibit limited robustness under out-of-distribution (OOD) shifts. Although recent causal approaches learn invariant representations via interventions, they are primarily designed for static or discrete-time graphs and become computationally prohibitive for CTDGs due to the combinatorial explosion of structural and temporal variations. To address these challenges, we propose CIR, a framework grounded in a novel structural causal model termed the ICCM. To avoid exhaustive interventions, we leverage the Normalized Weighted Geometric Mean (NWGM) to efficiently approximate interventional predictions. We further instantiate ICCM within a practical deep learning architecture that jointly captures invariant structural and temporal patterns through dedicated subgraph extractors, and maintains an environment memory bank to model distributional shifts across evolving contexts. Extensive experiments demonstrate that CIR consistently outperforms existing methods under diverse OOD scenarios.