Real-Time Branch-to-Tool Distance Estimation for Autonomous UAV Pruning: Benchmarking Five DEFOM-Stereo Variants from Simulation to Jetson Deployment

Autonomous drone-based tree pruning needs accurate, real-time depth estimation from stereo cameras. Depth is computed from disparity maps using $Z = f B/d$, so even small disparity errors cause noticeable depth mistakes at working distances. Building on our earlier work that identified DEFOM-Stereo as the best reference disparity generator for vegetation scenes, we present the first study to train and test ten deep stereo matching networks on real tree branch images. We use the Canterbury Tree Branches dataset -- 5,313 stereo pairs from a ZED Mini camera at 1080P and 720P -- with DEFOM-generated disparity maps as training targets. The ten methods cover step-by-step refinement, 3D convolution, edge-aware attention, and lightweight designs. Using perceptual metrics (SSIM, LPIPS, ViTScore) and structural metrics (SIFT/ORB feature matching), we find that BANet-3D produces the best overall quality (SSIM = 0.883, LPIPS = 0.157), while RAFT-Stereo scores highest on scene-level understanding (ViTScore = 0.799). Testing on an NVIDIA Jetson Orin Super (16 GB, independently powered) mounted on our drone shows that AnyNet reaches 6.99 FPS at 1080P -- the only near-real-time option -- while BANet-2D gives the best quality-speed balance at 1.21 FPS. We also compare 720P and 1080P processing times to guide resolution choices for forestry drone systems.

Accurate per-branch 3D reconstruction is a prerequisite for autonomous UAV-based tree pruning; however, dense disparity maps from modern stereo matchers often remain too noisy for individual branch analysis in complex forest canopies. This paper introduces a progressive pipeline integrating DEFOM-Stereo foundation-model disparity estimation, SAM3 instance segmentation, and multi-stage depth optimization to deliver robust per-branch point clouds. Starting from a naive baseline, we systematically identify and resolve three error families through successive refinements. Mask boundary contamination is first addressed through morphological erosion and subsequently refined via a skeleton-preserving variant to safeguard thin-branch topology. Segmentation inaccuracy is then mitigated using LAB-space Mahalanobis color validation coupled with cross-branch overlap arbitration. Finally, depth noise - the most persistent error source - is initially reduced by outlier removal and median filtering, before being superseded by a robust five-stage scheme comprising MAD global detection, spatial density consensus, local MAD filtering, RGB-guided filtering, and adaptive bilateral filtering. Evaluated on 1920x1080 stereo imagery of Radiata pine (Pinus radiata) acquired with a ZED Mini camera (63 mm baseline) from a UAV in Canterbury, New Zealand, the proposed pipeline reduces the average per-branch depth standard deviation by 82% while retaining edge fidelity. The result is geometrically coherent 3D point clouds suitable for autonomous pruning tool positioning. All code and processed data are publicly released to facilitate further UAV forestry research.

Manual pruning of radiata pine, a species of major economic importance to New Zealand forestry, is hazardous, labour-intensive, and increasingly constrained by workforce shortages. Existing autonomous pruning platforms typically rely on expensive sensors such as LiDAR and are limited to thick branches, which restricts their wider adoption. This paper investigates whether a single low-cost stereo camera mounted on a drone can provide sufficiently accurate branch detection and three-dimensional positioning to support autonomous pruning of branches as thin as 10 mm, thereby removing the need for auxiliary depth sensors. The proposed pipeline comprises two stages: branch segmentation and depth estimation. For segmentation, Mask R-CNN variants and the YOLOv8 and YOLOv9 families are compared on a custom dataset of 71 stereo image pairs captured with a ZED Mini camera; YOLOv8 and YOLOv9 are selected as representative state-of-the-art real-time segmentors at the time of data collection, and the framework is designed to remain compatible with newer YOLO releases. For depth estimation, a traditional method (SGBM with WLS filtering) and deep-learning-based methods (PSMNet, ACVNet, GWCNet, MobileStereoNet, RAFT-Stereo, and NeRF-Supervised Deep Stereo) are evaluated, including cross-dataset fine-tuning experiments that expose the domain gap between urban driving benchmarks and natural forestry scenes. The main novelty of this work lies in coupling stereo segmentation with a centroid-based triangulation algorithm and Median-Absolute-Deviation outlier rejection that converts a segmentation mask and disparity map into a single robust branch-to-camera distance, addressing the challenges of sparse texture, thin structures, and noisy disparity values typical of forest scenes. Qualitative evaluations at distances of 1-2 m show that the learning-based stereo methods produce more coherent depth es...