Organizations: Department of Forestry and Natural Resources, Purdue University, USA · Lyles School of Civil and Construction Engineering, Purdue University, USA
Airborne Laser Scanning (ALS) can collect point clouds across large areas, enabling large-scale forest inventory. However, ALS point clouds are sparse and noisy, resulting in inaccurate individual-tree-level forest inventory, such as stem localization and tree size estimation. To overcome this problem, we propose a deep learning model, 3D Forest Super Resolution (3DFSR), to simultaneously improve point density and reduce noise for ALS forest point cloud. 3DFSR is a voxel-based CNN with a U-Net architecture. The proposed 3DFSR is evaluated on ALS point clouds collected in both temperate forests in the U.S. and boreal forests in Germany. Experimental results demonstrate that 3DFSR can generate finer point clouds of tree structure than other state-of-the-art point cloud super-resolution algorithms, achieving 0.249 m Chamfer Distance and 2.711 m Hausdorff Distance. Furthermore, to verify the effectiveness of 3DFSR point clouds in forest inventory, we conduct stem detection, DBH measurements, and stem reconstruction on both original ALS point clouds and 3DFSR enhanced point clouds. We find that stem detection and reconstruction algorithms developed for TLS/MLS point clouds can directly work on our 3DFSR point clouds, and DBH can be derived with circle-fitting method. F1 score of stem detection is improved from 0.71 on original ALS point clouds to 0.97 on 3DFSR point clouds; DBH estimation improves from 13.45 cm RMSE using allometric equations to 6.43 cm using circle fitting; comparing to stems reconstruction from MLS point clouds, stem reconstructed from 3DFSR point clouds has 0.170 m of Chamfer Distance and 0.377 m of Hausdorff Distance, and 0.95 R2 volume estimation. Finally, we find that the proposed 3DFSR is applicable to process point densities from 10 to 1700 points/m2; it also can be generalized across data collected from different LiDAR platforms without transfer learning.
Accurate tree-level forest monitoring using laser scanning data requires reliable tree delineation, consistent tree correspondence across multitemporal point clouds, and accurate estimation of tree attributes and their change. Reconstructing tree growth in boreal forests is challenging due to the scarcity of historical stem-level data, propagation of errors from older sensors into change estimation, and growth rates with a magnitude of measurement uncertainty. This study investigates a framework for estimating individual tree diameter at breast height (DBH) and stem volume growth using 136 point clouds acquired between 2014--2025 with 11 scanners on airborne (ALS), mobile (MLS), and terrestrial laser scanning (TLS) platforms across boreal forest test sites. Trees were delineated from an MLS point cloud using deep learning-based segmentation which was transferred to the remaining point clouds, resulting in reliable multitemporal tree correspondence. Stem curves were derived from MLS/TLS data, with ALS data used for height estimation, enabling DBH and volume estimation and time series. A height growth-based scaling model was used to reconstruct stem attributes across time and estimate growth. Results showed that modeled growth achieved higher agreement with manual growth estimates than differencing independently estimated attributes from point clouds. The modeled-manual 5- and 10-year growth RMSEs were 55--111% and 26--67% for DBH, and 31--87% and 21--67% for volume, respectively, depending on plot difficulty. The scaling model was temporally robust, with errors remaining stable or stabilizing after 5--6 years, reaching maximum RMSEs of 8--12% for DBH and 12--23% for volume after 12 years. Combining MLS/TLS-derived stem measurements with multitemporal ALS-derived heights provided a robust framework for individual tree growth estimation without requiring multiple under-canopy scans.
Detailed structural and species information on individual tree level is increasingly important to support precision forestry, biodiversity conservation, and provide reference data for biomass and carbon mapping. Point clouds from airborne and ground-based laser scanning are currently the most suitable data source to rapidly derive such information at scale. Recent advancements in deep learning improved segmenting and classifying individual trees and identifying semantic tree components. However, deep learning models typically require large amounts of annotated training data which limits further improvement. Producing dense, high-quality annotations for 3D point clouds, especially in complex forests, is labor-intensive and challenging to scale. We explore strategies to reduce dependence on large annotated datasets using self-supervised and transfer learning. Our objective is to improve performance across three tasks: instance segmentation, semantic segmentation, and tree classification using realistic and operational training sets. We observe improvements across all tasks, compared to training from scratch, evaluated with their respective metrics. For instance segmentation, self-supervised learning combined with domain adaptation improves AP50 by 16.98%. For semantic segmentation, self-supervised learning alone improves mIoU by 1.79%. For tree classification, hierarchical transfer learning improves mean Jaccard by 6.07%. To simplify use and encourage uptake, we integrated the tasks into a unified framework, streamlining the process from raw point clouds to tree delineation, structural analysis, and species classification. Pretrained models reduce energy consumption and carbon emissions by ~21%. This open-source contribution aims to accelerate operational extraction of individual tree information from laser scanning point clouds to support forestry, biodiversity, and carbon mapping.
Aldino Rizaldy, Fabian Ewald Fassnacht, Ahmed Jamal Afifi +3
The shift from stand-level to individual-tree-level forest assessments supports improved species mapping and biodiversity monitoring, particularly in boreal ecosystems where tree species like aspen (Populus tremula L.) play a keystone role. Airborne laser scanning (ALS) is the standard for such inventories, but a major limitation for developing improved species classification methods is the small number of publicly available ALS datasets containing high-quality, field-validated reference data. Recently, multispectral ALS data has shown promise for tree species classification, but the progress is hindered by the lack of open multispectral ALS datasets with high-quality field reference data. This paper presents and details an open multispectral ALS dataset for tree species classification that was used before its public release for an international benchmarking study of machine learning and deep learning classification methods in a related publication by Taher et al.,(2026). The dataset comprises 6326 segment-level point clouds of individual trees representing nine species in southern Finland. The point cloud data has been acquired using two multispectral laser scanning systems each operating at three laser wavelengths: a helicopter-borne system (HeliALS) with a point density exceeding 1000 points\m2 and an Optech Titan system with approximately 35 points\m2. Furthermore, we present a crowdsourcing application that facilitates the collection of high-quality field reference data of tree species in an efficient and scalable manner. Our article showcases the versatility of the open dataset by presenting new analyses on species classification using multispectral data building upon the initial findings of Taher et al.,(2026).