Trustworthy MRI Reconstruction via Bayesian Uncertainty Quantification with Sparsity Prior Models

Parallel imaging techniques reduce magnetic resonance imaging (MRI) scan time but image quality degrades as the acceleration factor increases. In clinical practice, conservative acceleration factors are chosen because no mechanism exists to automatically assess the diagnostic quality of undersampled reconstructions. This work introduces a general framework for pixel-wise uncertainty quantification in parallel MRI reconstructions, enabling automatic identification of unreliable regions without access to any ground-truth reference image. Our method integrates conformal quantile regression with image reconstruction methods to estimate statistically rigorous pixel-wise uncertainty intervals. We trained and evaluated our model on Cartesian undersampled brain and knee data obtained from the fastMRI dataset using acceleration factors ranging from 2 to 10. An end-to-end Variational Network was used for image reconstruction. Quantitative experiments demonstrate strong agreement between predicted uncertainty maps and true reconstruction error. Using our method, the corresponding Pearson correlation coefficient was higher than 90% at acceleration levels at and above four-fold; whereas it dropped to less than 70% when the uncertainty was computed using a simpler a heuristic notion (magnitude of the residual). Qualitative examples further show the uncertainty maps based on quantile regression capture the magnitude and spatial distribution of reconstruction errors across acceleration factors, with regions of elevated uncertainty aligning with pathologies and artifacts. The proposed framework enables evaluation of reconstruction quality without access to fully-sampled ground-truth reference images. It represents a step toward adaptive MRI acquisition protocols that may be able to dynamically balance scan time and diagnostic reliability.

Magnetic resonance imaging (MRI) is highly susceptible to patient motion due to its relatively long acquisition times and the fact that data are acquired sequentially in k-space. Even small patient movements introduce phase inconsistencies across measurements, leading to severe artifacts such as blurring, ghosting, and geometric distortions that can compromise diagnostic quality. Retrospective motion compensation remains challenging, particularly in accelerated acquisitions, due to the ill-posed nature of the joint reconstruction and motion estimation problem. In this work, we propose a unified Bayesian framework for motion-compensated 3D MRI that jointly estimates the anatomical image, rigid-body motion parameters, and coil sensitivity maps directly from motion-corrupted k-space data. Our approach integrates pretrained 3D complex-valued score-based diffusion models as expressive anatomical image priors within a physics-based forward model. Inference is performed by alternating diffusion posterior image updates with efficient proximal optimization steps for motion and coil sensitivity estimation, enabling fully unsupervised reconstruction without the need for paired motion-free training data. Experiments on simulated and real-motion brain MRI datasets demonstrate that the proposed method achieves improved image quality and motion robustness compared to state-of-the-art classical and learning-based motion correction techniques, particularly in the presence of severe motion and high acceleration.

Here we introduce ELECTRIC (Evidential Learning-Enhanced CT Reconstruction via Iterative Correction), a physics-guided Bayesian formulation. An evidential neural network provides an image proposal and an error-predictive epistemic-uncertainty surrogate. The latter is converted into an adaptive precision field and inserted into a Poisson-weighted MAP update. The resulting image-evidence-precision-reconstruction loop treats prior confidence as a learned state variable of iterative reconstruction. In addition to the formulation and theoretical analysis, we report two simulation studies on image slices from the AAPM Mayo Clinic Low-Dose CT dataset: a mechanism-validation pilot using transparent surrogate estimators, and a feasibility study in which a trained Normal-Inverse-Gamma evidential network drives the full closed loop. On held-out patients, the learned prior mean reduces reconstruction error by roughly 70 percent relative to filtered back-projection, the learned epistemic uncertainty is error-predictive and supports selective trust, and the physics-guided update restores measurement consistency while the adaptive-precision reconstruction matches or exceeds a validation-tuned fixed prior and remains markedly more robust to prior-strength misspecification. Together these results demonstrate the complete ELECTRIC closed-loop pipeline, while identifying formal uncertainty calibration and joint training as the principal directions for future work.