Lifted inference exploits indistinguishabilities in probabilistic graphical models by using a representative for indistinguishable objects, thereby speeding up query answering while maintaining exact answers. In this article, we show how lifting can be applied to efficiently compute causal effects in relational domains. More specifically, we introduce parametric causal factor graphs (PCFGs) to incorporate causal knowledge in lifted models and give a formal semantics of interventions therein. We further present the Lifted Causal Inference (LCI) algorithm to compute causal effects on a lifted level, thereby drastically speeding up causal inference compared to propositional inference, e.g., in causal Bayesian networks. In addition, we present partially directed parametric causal factor graphs (PD-PCFGs) as a generalisation of PCFGs to handle partial causal knowledge and extend LCI to perform lifted causal inference in a PD-PCFG, thereby extending the applicability of lifted causal inference to a broader range of models requiring less prior knowledge about causal relationships.
Estimating causal quantities traditionally relies on bespoke estimators tailored to specific assumptions. Recently proposed Causal Foundation Models (CFMs) promise a more unified approach by amortising causal discovery and inference in a single step. However, in their current state, they do not allow for the incorporation of any domain knowledge, which can lead to suboptimal predictions. We bridge this gap by introducing methods to condition CFMs on causal information, such as the causal graph or more readily available ancestral information. When access to complete causal graph information is too strict a requirement, our approach also effectively leverages partial causal information. We systematically evaluate conditioning strategies and find that injecting learnable biases into the attention mechanism, together with a graph-convolutional encoder, is a highly effective method to utilise full and partial causal information. Our experiments show that this conditioning allows a general-purpose CFM to match the performance of specialised models trained on specific causal structures. Overall, our approach addresses a central hurdle on the path towards all-in-one causal foundation models: the capability to answer causal queries in a data-driven manner while effectively leveraging any amount of domain expertise.
Pearl famously argues that causal knowledge enables the prediction of intervention effects. By contrast, purely descriptive knowledge supports only conclusions drawn from observations. His theory of causality, however, is developed exclusively within Bayesian networks and causal models. Consequently, it is largely restricted to acyclic causal relationships, and transferring its ideas to other formalisms risks misinterpretation or inconsistency. This paper brings Pearl's approach to causality into probabilistic logic programming (PLP). To this end, such programs are aligned with philosophical foundations established in prior work that do not rely on temporal notions; that is, all relevant events are assumed to occur simultaneously. A formal causal semantics for these programs, together with a notion of intervention and an implementation, is proposed. It is shown that this semantics coincides with the P-log semantics for stratified ProbLog programs, while the two may differ in the non-stratified case and for other PLP formalisms.
Causal discovery aims to uncover the underlying causal relationships given data generated from a system. The goal, however, is not merely to predict causal edges given data, but also to be able to interpret and explain either observed or hypothesized phenomena, such as a particularly large causal effect. We consider this task of conditional causal discovery and cast it as a Bayesian inference problem, in which we target the posterior over causal graphs and parameters conditional on an event such as a causal-effect constraint. Unfortunately, this poses a computational challenge: existing approaches to Bayesian causal discovery struggle when the event has small posterior mass. To address this, we adapt rare-event estimation techniques to perform inference the joint graph-parameter space. Our method gradually drives a particle population toward the constrained region while maintaining samples that approximate the conditional posterior. Empirical evaluation on synthetic graphs validates the accuracy of our approach at small and large scales, and we show in a case study on the Sachs protein dataset how our method can be used to aid scientific exploration by providing pathway-level summaries.