Close-range first-person field images are important for mobile maize phenotyping because many plant-level traits depend on in-canopy structures that are difficult to ob serve from overhead views. However, post-seedling maize fields create a difficult in stance segmentation setting: stems, leaves, tassels, and neighboring plants are elon gated, repetitive, and strongly occluded. We introduce EgoMaize, a compact benchmark for first-person maize instance segmentation, where the task is to predict ownership consistent plant masks and plant-owned stem/tassel cues from close-range field images with severe same-class overlap. Existing visible-only labels can fragment one physi cal plant into disconnected supervision, while full-amodal labels may require unverifi able completion behind neighboring plants or field objects. EgoMaize therefore uses an evidence-closed annotation workflow for occluded maize regions and assigns unreli able maize regions to ignore rather than background. Baseline results show that pre trained query-based grouping, boundary refinement, and high-resolution crop refine ment help different aspects of the task, but no architecture solves the coupled chal lenges of fine structure recovery, same-class instance ownership, and occlusion reason ing; occlusion-level analysis further shows that performance decreases as plant visi bility becomes more limited. The dataset and code are publicly available at https: //github.com/JaaaaaaaD/EgoMaize.
Rising global food demand and growing climate pressure increase the need for sustainable, precise agricultural practices. Automated, individualized plant treatment relies on fine-grained visual analysis, yet leaf-level segmentation remains underexplored despite its value for assessing crop health, growth dynamics, yield potential and localized stress symptoms. Progress is limited by a lack of dedicated datasets, especially regarding species coverage, and by the absence of systematic evaluations of modern instance-segmentation architectures for this task. We address these gaps by surveying current data and identifying four suitable, publicly available leaf-segmentation datasets. Using them, we compare one-stage, two-stage and Transformer-based detectors and identify a YOLO26 model configuration to provide the best trade-off for real-world precision-agriculture tasks. Extensive cross-domain generalization experiments reveal substantial performance drops across plant species and recording setups, especially for models trained solely on laboratory data. To strengthen data availability, we introduce a new benchmark dataset with leaf-level masks for 23 plant species, created via semi-automatic annotation of selected CropAndWeed images. A model trained on all four existing datasets achieves a mean mAP50-95 of 83.9% across their corresponding test sets and 40.2% on our new benchmark, demonstrating improved generalization and highlighting the need for diverse leaf-segmentation datasets in robust precision agriculture.
Robert Martinko, Daniel Steininger, Julia Simon +2
Maize kernel traits such as row number, kernels per row, and kernel size vary largely for genetic reasons and are consistently associated with regions of the genome that influence yield. Manual measurement of these traits, however, cannot keep pace with the volume of maize generated in a breeding program. To address this, we developed and validated a fully automated pipeline for extracting these traits from 3D point clouds of corn ears, built on a recently developed video-to-point-cloud platform. Raw video frames are processed through COLMAP and NeRF, the ear is isolated via density-based separation, and the point cloud is distance-calibrated to physical units. The calibrated ear point cloud was Z-axis aligned via PCA and cylindrically unwrapped to a 2D image. We enhanced contrast and performed zero-fine-tuning instance segmentation using Cellpose-SAM. A triple-juxtaposed unwrap strategy was used to prevent double-counting at the seam. The pipeline achieved kernel count R^2 = 0.921 (MAPE = 10.33%) and kernel row number within +-2 rows for 95.2% of ears (MAE = 0.75 rows) on a 168-ear held-out set from the 268-ear labeled dataset. The resulting multi-trait dataset has known genotype identity for each ear, positioning it for phenotype-to-genotype association analyses.
Accurate 3D plant organ segmentation is fundamental to automated phenotyping. Existing approaches rely on annotated training data or species-specific model configurations. We present an annotation-free pipeline for 3D plant organ segmentation, combining text-prompted SAM3 segmentation with semantic neural radiance fields (NeRFs). Given only multi-view RGB images and a list of class names, our zero-shot pipeline produces semantically labeled 3D point clouds without manual annotation, per-species fine-tuning, or domain-specific preprocessing. Multi-view NeRF fusion acts as effective implicit consensus mechanism that lifts imperfect per-frame masks into accurate 3D labels. On a controlled Begonia maculata testbed the SAM3 pipeline achieves 92.6% mIoU, reaching 95.9% of the oracle upper bound established with perfect ground-truth masks. The pipeline was further evaluated on a new dataset spanning ten diverse plant point clouds reaching an average 0.856 mIoU, with leaf and pot IoU above 0.91 and 0.90 for every species, respectively. These results demonstrate that annotation-free 3D plant organ segmentation is now feasible and approaching the range of supervised methods.