Citation Verification

Large language models (LLMs) power deep research agents that synthesize information from hundreds of web sources into cited reports, yet these citations cannot be reliably verified. Current approaches either trust models to self-cite accurately, risking bias, or employ retrieval-augmented generation (RAG) that does not validate source accessibility, relevance, or factual consistency. We introduce the first source attribution evaluation framework that uses a reproducible AST parser to extract and evaluate inline citations from LLM-generated Markdown reports at scale. Unlike methods that verify claims in isolation, our framework closes the loop by retrieving the actual cited content, enabling human or model evaluators to judge each citation against its source. Citations are evaluated along three dimensions. (1) Link Works verifies URL accessibility, (2) Relevant Content measures topical alignment, and (3) Fact Check validates factual accuracy against source content. We benchmark 14 closed-source and open-source LLMs across three evaluation dimensions using rubric-based LLM-as-a-judge evaluators calibrated through human review. Our results reveal that even the strongest frontier models maintain link validity above 94% and relevance above 80%, yet achieve only 39-77% factual accuracy, while fewer than half of open-source models successfully generate cited reports in a one-shot setting. Ablation studies on research depth show that Fact Check accuracy drops by approximately 42% on average across two frontier models as tool calls scale from 2 to 150, demonstrating that more retrieval does not produce more accurate citations. These findings reveal a critical disconnect between surface-level citation quality and factual reliability, and our framework provides the evaluation infrastructure to assess the disconnect.

We introduce HalluCiteChecker, a toolkit for detecting and verifying hallucinated citations in scientific papers. While AI assistant technologies have transformed the academic writing process, including citation recommendation, they have also led to the emergence of hallucinated citations that do not correspond to any existing work. Such citations not only undermine the credibility of scientific papers but also impose an additional burden on reviewers and authors, who must manually verify their validity during the review process. In this study, we formalize hallucinated citation detection as an NLP task and provide a corresponding toolkit as a practical foundation for addressing this problem. Our package is lightweight and can perform verification in seconds on a standard laptop. It can also be executed entirely offline and runs efficiently using only CPUs. We hope that HalluCiteChecker will help reduce reviewer workload and support organizers by enabling systematic pre-review and publication checks. Our code is released under the Apache 2.0 license on GitHub and is distributed as an installable package via PyPI. A demonstration video is available on YouTube.

Frontier large language models generate clinically accurate outputs, but their citations are often fabricated. We term this the Provenance Gap. We tested five frontier LLMs across 36 clinician-validated scenarios for three rare neuromuscular disease pairs. No model produced a clinically relevant PubMed identifier without prompting. When explicitly asked to cite, the best model achieved 15.3% relevant PMIDs; the majority resolved to real publications in unrelated fields. We present HEG-TKG (Hierarchical Evidence-Grounded Temporal Knowledge Graphs), a system that grounds clinical claims in temporal knowledge graphs built from 4,512 PubMed records and curated sources with quality-tier stratification and 1,280 disease-trajectory milestones. In a controlled three-arm comparison using the same synthesis model, HEG-TKG matches baseline clinical feature coverage while achieving 100% evidence verifiability with 203 inline citations. Guideline-RAG, given overlapping source documents as raw text, produces zero verifiable citations. LLM judges cannot distinguish fabricated from verified citations without PubMed audit data. Independent clinician evaluation confirms the verifiability advantage (Cohen's d = 1.81, p < 0.001) with no degradation on safety or completeness. A counterfactual experiment shows 80% resistance to injected clinical errors with 100% detectability via citation trace. The system deploys on-premise via open-source models so patient data never leaves institutional infrastructure.

Large language models (LLMs) increasingly generate citation-backed responses, yet citation hallucination remains a major challenge for trustworthy scientific information access. We introduce REASONS, a benchmark of 12,723 sentence-level citation instances spanning 12 arXiv subject categories, designed to evaluate scientific citation attribution under varying evidence conditions. We propose a dual-metric framework consisting of Abstention Rate (AR) and Hallucination Rate (HR) to characterize the trade-off between reliability and responsiveness. Using author-attribution and title-attribution tasks, we evaluate proprietary and open-source LLMs under zero-context, metadata-augmented, cascaded metadata-augmented prompting (CMP), retrieval-augmented, and adversarial settings. Advanced RAG lowers HR relative to Naive RAG (65.4% vs. 87.6%) but reduces AR from 5.0% to 0%. Under adversarial metadata, several systems exceed 85% HR, while retrieval-augmented variants frequently maintain near-zero abstention. Human evaluation of 1,000 outputs ($κ=0.78$) finds a 12.7:1 ratio of factual hallucinations to acceptable paraphrases. Our findings demonstrate that citation attribution systems should be evaluated not only for correctness but also for their ability to abstain appropriately under uncertainty. REASONS provides a benchmark and evaluation framework for studying attribution reliability in citation generation.