Overview

Sequence modeling asks how information in an ordered stream—such as words, sensor readings, user actions, or DNA—can be used to predict what comes next or interpret the sequence as a whole. Common approaches include recurrent networks such as LSTMs, Transformer attention, state-space models such as Mamba, and Markov or hidden Markov models; hybrids and diffusion methods are also used for long or structured sequences. Applications range from language and time-series forecasting to recommendation, biological analysis, and action recognition, with evaluation often testing prediction quality, long-range recall, and generalization to new lengths or domains. A central tension is balancing expressive memory and reliable long-context behavior against computation, latency, and memory costs, while ensuring benchmarks measure genuine sequence understanding rather than leakage or repetition.

Latest papers

CardsList

250 papers22 papers in the last four weeks, up 38% on the four weeks before. 0.1% of all new papers.

  1. GTFormer: A Syntax-Free Graph Network Alternative to Transformers for 8192×\times Length Extrapolation in Linear Time

    Oct 27, 2026Elisabeth FinkLong-Context ModelingSequence Modeling

  2. TRIDENT-Seq: Profile-Matched Prefix-Future Contrast for Label-Efficient Payment Risk Modeling

    Oct 27, 2026Weiyu Han, Haoyu Jiang, Jie Sheng +7Financial Fraud DetectionContrastive Learning

  3. LEAP: a Latent Embedding Anomaly Patch-Transformer for time-series anomaly detection

    Oct 26, 2026Cristhian Moya-Mota, Ignacio Aguilera-Martos, Diego García-Gil +1Time-Series Anomaly DetectionUnsupervised Anomaly Detection

  4. Empirical Boundaries of Reservoir Computing for Few-Shot Sequence Pattern Tasks

    Oct 14, 2026Mario Mallea, Angela Nebot, Franscisco MugicaSequence-to-Sequence ModelsReservoir Computing

  5. Learning Source Structure: Bayesian Prediction with Transformers

    Oct 13, 2026Meir Feder, Ruediger UrbankeTransformerSequence Modeling

  6. The Language of Looking: Motion Tokens Reveal Domain-Dependent Local Structure in Gaze Sequences

    Oct 12, 2026Virmarie Maquiling, Enkelejda KasneciDomain GeneralizationSequence Modeling

  7. FON: A Draft-Revise Dual-Organ Language Model without Sequence-Level Quadratic Attention

    Oct 12, 2026Helong Hu, Hongdan Pan, Shuiqing HuLanguage ModelingSequence Modeling

  8. What DNA Foundation Models Learn Beyond Sequence Composition

    Oct 11, 2026Vincenzo Yuto Civale, Andrew David Bagdanov, Alberto MagiGenomic Foundation ModelsMolecular Foundation Models

  9. The RNN Homunculus: Learning to Gate Long-Term Memory

    Oct 9, 2026Zeyu Fan, Alexandru-Dragos Manolache, Jan van GemertLong-Range Dependency ModelingRecurrent Neural Networks

  10. Understanding Mamba-3 Through Oscillatory Dynamics

    Oct 9, 2026Shutian Liang, Yue SongSequence ModelingSelective SSMs

  11. Double-Take: Improving Capacity, Binding, and Selectivity In Long-Context Within Bidirectional Memory

    Oct 9, 2026Vakul Raghavan, Utkarsh Grover, Mingyang Mao +2Long-Context ModelingMemory-Augmented Neural Networks

  12. Time Delay System for Sequence Modeling

    Oct 9, 2026Youshan Zhang, Jialu LiSequence ModelingTemporal Attention

  13. TraceRelay: Attention-Aligned Recurrence over Rolling Traces

    Oct 8, 2026Sungwoo Goo, Hwi-yeol Yun, Sangkeun JungSequence ModelingPersistent Memory for Language Models

  14. Elucidating the Space of Enzymatic Reaction: A Unified Benchmark and Pretrained Model

    Oct 8, 2026Yutong Hu, Tianming Huang, Yanbo Zhao +6Sequence-to-Sequence ModelsChemical Reaction Prediction

  15. CASM: Context-Aware Semi-Markov Post-Processor for Beat Tracking

    Oct 7, 2026Zhanhong He, Hanyu Meng, Yaolong JuMusic Information RetrievalSequence Modeling

  16. SepsisLens: Structure-Preserving Sequence Modelling for Decomposable Early Sepsis Warning

    Oct 6, 2026Yikun Ou, Wei LiSepsis PredictionInterpretable ML

  17. How Far Back Should a Transformer Look? Repetition and Copying in Music Sequence Models

    Oct 2, 2026Amir FathiLong-Context ModelingSequence Modeling

  18. VANDAM: Viewing a nucleotide sequence with DNA molecular priors

    Sep 30, 2026Jeremy Levy, Ariel Larey, Yury Nahshan +18Self-Supervised Pre-TrainingGenomic Foundation Models

  19. RiboUnmix: Learning Shared Translational Dynamics from Biased and Noisy Ribo-seq Measurements

    Sep 30, 2026Gabriele Martino, Denis Skibinski, Ivo L. Hofacker +1Multi-Task LearningSequence Modeling

  20. Generative sequence modeling for infinite memory processes via predictive states

    Sep 29, 2026Michael Wieck-Sosa, Cosma Rohilla ShaliziConditional Distribution EstimationSequence Modeling

  21. LEMON-ZEST: Evolution-Informed Tokenization for Efficient Protein Language Modeling

    Sep 29, 2026Biswajit Banerjee, Claudia Alvarez Carreno, Anton S. PetrovProtein Language ModelsProtein Representation Learning

  22. Non-Commutative Lie-Algebraic State-Space Models: Finite-Division Variety Laws, Semidirect Cascades, and Gradient Saddle Escape

    Sep 29, 2026Zeyu JiaState Space ModelsSequence Modeling

  23. Riccati State Space Models: Non-iterative Parallelization for Nonlinear Sequence Modeling

    Sep 28, 2026Mónika Farsang, Ramin Hasani, Daniela Rus +1Sequence ModelingState Space Models

  24. ADPTNet: Adaptive with Prescriptive Timescales Non-Linear SSM for Sequence Modelling

    Sep 27, 2026Matei-Ioan Stan, Oliver RhodesRecurrent Neural NetworksNeuromorphic Computing

  25. Length-Independent State Tracking Under a Parallel Scan

    Sep 26, 2026Julien Brandoit, Arthur Fyon, Thomas Braipson +5Finite-State MachineRecurrent Neural Networks

  26. DP-Rec: Towards Dynamic Patching for Efficient Long-Sequence Recommendation

    Sep 26, 2026Dwipam Katariya, Thomas Caputo, Akshat Shreemali +6Sequential RecommendationSequence Modeling

  27. Brain-Token Learning: Microstate-Based Tokenization and Multi-Scale Interaction for Long-Horizon EEG Sequence Modeling

    Sep 21, 2026Weishan Ye, Yue Pan, Li Zhang +2ElectroencephalographySequence Modeling