TopoPilot: Reliable Conversational Workflow Automation for Topological Data Analysis and Visualization

GraphFlow is a visual workflow system designed to improve the reliability of agentic AI automation in multi-step, mission-critical processes. In these workflows, small errors compound rapidly: under an idealized model of independent steps, a ten-step process with 90% per-step reliability completes successfully only 35% of the time. Existing workflow platforms provide durable execution and observability but offer few semantic correctness guarantees, while agentic systems plan at inference time, making behavior sensitive to prompt variation and difficult to audit. GraphFlow is designed to address this gap by treating workflow diagrams as the executable specification, a single artifact defining data scope, execution semantics, and monitoring. At compile time, a restricted class of diagrams is specified to produce reusable automations whose contracts (preconditions, postconditions, and composition obligations) are intended to be proof-checked before admission to a shared library. At runtime, a durable engine records outcomes in an append-only event log and can enforce contracts at system boundaries, supporting replay, retries, and audit. Swimlanes make trust boundaries explicit, separating verified logic from external systems, human judgment, and AI decisions. A year-long pilot across three clinical sites executed 8,728 cohort-enrolled workflow runs with a 97.08% completion rate under an early prototype without the verified-core subsystem; observed failures were localized primarily to external integrations. The formal semantics and proof-checked admission model described here are specified and under active development. Evaluation of the verified core is reserved for future work.

Large language model (LLM) agents enable natural language interaction for scientific visualization (SciVis). Still, prior systems have essentially prioritized autonomy over human analytical control, thereby limiting transparency and human oversight. We present HiLSVA, a human-in-the-loop agentic system that supports mixed-initiative SciVis workflows. HiLSVA integrates a plan-first multi-agent architecture with explicit human oversight, stepwise provenance tracking, and learn-at-test-time adaptation from user feedback. The system supports fluid handoff between humans and agents through both natural language and direct manipulation of visualizations, while sandboxed execution ensures safe, reproducible workflows. In doing so, HiLSVA reframes agentic SciVis as a collaborative process that augments, rather than replaces, human analytical reasoning. We evaluate HiLSVA through representative case studies and a controlled user study with twelve participants of varying expertise across multiple autonomy settings. Results show that mixed-initiative interaction improves task completion, user control, and workflow transparency across different levels of user expertise, while revealing a tradeoff between execution efficiency and human oversight. These findings highlight the importance of human-centered design in agentic SciVis and guide the development of future collaborative visualization systems. We encourage readers to explore our demo video, case studies, and source code at https://hilsva.github.io/.

Recent advances in agentic AI have enabled increasingly autonomous workflows, but existing systems still face substantial challenges in achieving reliable deployment in real-world scientific research. In this work, we present a safe, lightweight, and user-friendly agentic framework for the autonomous execution of well-defined scientific tasks. The framework combines an isolated execution environment, a three-layer agent loop, and a self-assessing do-until mechanism to ensure safe and reliable operation while effectively leveraging large language models of varying capability levels. By focusing on structured tasks with clearly defined context and stopping criteria, the framework supports end-to-end automation with minimal human intervention, enabling researchers to offload routine workloads and devote more effort to creative activities and open-ended scientific inquiry.