EEG Decoding

EEG: Electroencephalography

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21 papers in the last four weeks, up 200% on the four weeks before. 0.2% of all new papers.

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Latest papers 136

May 23, 2026cs.LG

Assessing Region-Level EEG Contributions to Cognitive Workload Prediction

Accurate and generalizable estimation of cognitive workload from electroencephalography (EEG) is critical for human-centered and safety-critical systems. Although EEG is widely used for workload assessment, the consistency of region-level EEG contributions across tasks, datasets, and subjects remains unclear. This paper presents a region-level evaluation framework for EEG-based workload prediction in which models are trained and evaluated using features extracted exclusively from electrodes belonging to anatomically defined scalp regions. We perform a large-scale analysis across four publicly available EEG workload datasets spanning diverse task demands, recording hardware, and electrode montages. Region importance is quantified using a model-agnostic, performance-based approach under both mixed-subject and subject-independent evaluation protocols, with results aggregated using a rank-based strategy to ensure robustness across experimental configurations. Across all datasets and subject-independent evaluations, frontal electrode groups outperform the full-scalp baseline by approximately 15-20% in relative rank position while using substantially fewer electrodes. Fronto-central regions exhibit the most stable predictive utility, whereas posterior and occipital regions contribute less consistently across experimental conditions. These findings indicate that workload-relevant EEG information is most consistently retained within frontal and fronto-central electrode groups, supporting the design of efficient and generalizable EEG-based workload monitoring systems.

Jacob Wong, Sohan Singh, Prannaya Gupta +3

School of InfoComm Technology, Ngee Ann Polytechnic · Engineering Product Development Pillar, Singapore University of Technology and Design · NUS High School of Math and Science

Electroencephalography EEG Decoding Feature Selection

May 22, 2026cs.LG

Making Brain-Computer Interfaces More Secure

The development of brain-computer interfaces (BCIs) based on electroencephalograms (EEGs) has advanced significantly mainly to machine learning. Although the majority of earlier research has been on increasing classification accuracy, relatively little focus has been placed on security and robustness. According to recent research, EEG-based BCIs are susceptible to adversarial attacks, which can cause misdiagnosis due to minute, well-crafted disturbances. Evaluating model robustness against such perturbations is therefore critical for ensuring reliable deployment. In this study, we propose a lightweight custom Convolutional Neural Network (CNN) architecture to investigate adversarial robustness in EEG-based BCIs. The suggested method is assessed using two EEG datasets and contrasted with three novel CNN models tailored to EEG, namely EEGNet, DeepConvNet, and SleepEEGNet, under gradient-based adversarial attack scenarios. According to experimental findings, the suggested model continuously performs better in classification under adversarial perturbations compared to baseline models, indicating improved robustness. These findings highlight the potential of lightweight architectures for enhancing the reliability of EEG-based BCI systems under adversarial conditions.

Md Fahimul Kabir Chowdhury, Gahangir Hossain

Department of Computer Science and Engineering, University of North Texas, USA · Department of Data Science, University of North Texas, USA

Brain-Computer Interfaces Adversarial Attacks EEG Decoding Adversarial Robustness Convolutional Neural Networks

May 21, 2026eess.SP

L-FAME: Longitudinal Focused Attention Meditation EEG Dataset and Benchmark

We introduce a novel Longitudinal Focused Attention Meditation Electroencephalography (L-FAME) dataset and an accompanying benchmark, designed to foster research into the neural effects of various meditation practices and the evolution of these effects over a six-week training period. The dataset contains EEG recordings and psychological assessments from 74 healthy college participants, collected at two distinct time points: pre-intervention and post-intervention. Participants were randomly assigned to one of three distinct meditation groups: two mantra-based techniques (SA-TA-NA-MA and Hare Krishna) and one Breath Focus practice. Leveraging this unique longitudinal and comparative dataset, we propose a benchmark suite comprising three distinct classification tasks: (1) cognitive state decoding to distinguish between resting and meditation states, (2) fine-grained classification of the specific meditation techniques, and (3) cross-session adaptation to evaluate model generalization across the longitudinal time gap. We provide comprehensive baseline results for these tasks utilizing a range of classical machine learning algorithms and deep learning architectures. The complete dataset, preprocessing pipelines, and benchmark evaluation code will be publicly released, offering a valuable resource and a standardized framework for the development and comparison of new analytical methods in computational meditation research and EEG-based machine learning. The dataset is available at https://huggingface.co/datasets/L-FAME-Dataset-Benchmark/L-FAME

Angqi Li, Ab Basit Rafi Syed, Hamzeh Alzweri +3

Department of CMSE Michigan State University East Lansing, MI 48824 · Department of CSE Michigan State University East Lansing, MI 48824 · Department of Psychology Michigan State University East Lansing, MI 48824 +2

Electroencephalography EEG Decoding

May 19, 2026cs.LG

Atoms of Thought: Universal EEG Representation Learning with Microstates

Learning universal representations from electroencephalogram (EEG) signals is a cutting-edge approach in the field of neuroinformatics and brain-computer interfaces (BCIs). Conventionally, EEG is treated as a multivariate temporal signal, where time- or frequency-domain features are extracted for representation learning. This paper investigates a simple yet effective EEG representation, i.e., microstates. Microstates represent the building blocks of brain activity patterns at a microscopic time scale. We build a universal microstate tokenizer from a large medical EEG dataset by clustering continuous EEG signals into sequences of discrete microstates. The microstate tokenizer is then adopted universally across a series of downstream tasks, including sleep staging, emotion recognition, and motor imagery classification. Experimental results show that EEG representation learning with microstates outperforms traditional time-domain and frequency-domain features under different models and across different tasks. Further analysis shows that microstates offer greater interpretability and scalability, thereby opening up applications in both cognitive neuroscience and clinical research.

Xinyang Tian, Ruitao Liu, Ziyi Ye +3

Electroencephalography Representation Learning EEG Decoding

May 19, 2026eess.SP

Classification of IED-free EEG Responses for Assisted Epilepsy Diagnosis

Diagnosing epilepsy is challenging when routine EEGs lack interictal epileptiform discharges (IEDs). Intermittent photic stimulation (IPS) and hyperventilation (HV) can increase diagnostic yield, but their interpretation is subjective. We propose a reproducible pipeline that classifies EEG recordings acquired during stimulation procedures, using machine-learning features spanning temporal, spectral, wavelet, and connectivity domains, and a stacked ensemble to combine complementary feature sets. Performance is evaluated with leave-one-subject-out (LOSO) cross-validation on the TUH Epilepsy Corpus and a clinical Erasmus MC (EMC) cohort, including IED-free analyses on TUH. On TUH, ensembles achieve up to 97.8% AUC / 93.1% BAC on IED-free resting-state EEG and 94.1% AUC / 86.8% BAC on IED-free IPS. On EMC, IPS provides the strongest discrimination (79.4% AUC / 73.9% BAC), while HV performance benefits from stratifying subjects by responsiveness. These results indicate that stimulation-evoked activity, particularly IPS, contains meaningful discriminative information for IED-free epilepsy classification and that multi-domain ensembling improves robustness.

Giacomo Zanardini, Ryan Moesman, Paul van der Kleij +2

Signal Processing Systems, Delft University of Technology, Delft, The Netherlands · Department of Neurology, Erasmus Medical Center, Rotterdam, The Netherlands

Electroencephalography EEG Decoding

May 18, 2026cs.AI

DARE-EEG: A Foundation Model for Mining Dual-Aligned Representation of EEG

Foundation models pre-trained through masked reconstruction on large-scale EEG data have emerged as a promising paradigm for learning generalizable neural representations across diverse brain-computer interface applications. However, a critical yet overlooked challenge is that EEG encoders must learn representations invariant to incomplete observations-when different masked views of the same signal have minimal overlap, existing methods fail to constrain them to a consistent latent subspace, leading to degraded transferability. To address this, we propose DARE-EEG, a self-supervised foundation model that explicitly enforces the mask-invariance property through dual-aligned representation learning during pre-training. Specifically, we introduce mask alignment that constrains representations from multiple masked views of the same EEG sample via contrastive learning, complementing anchor alignment that aligns masked representations to momentum-updated complete features for semantic stability. Additionally, we propose conv-linear-probing, a parameter-efficient strategy that adapts pre-trained representations to heterogeneous electrode configurations and sampling rates through decoupled spectro-spatial projections. Extensive experiments across diverse EEG benchmarks demonstrate that DARE-EEG consistently achieves state-of-the-art in accuracy performance while maintaining relatively low parameter complexity and superior cross-dataset portability compared to existing methods. Furthermore, DARE-EEG contributes to effectively discovering and utilizing the rich potential representations in EEG.

Yang Shao, Peiliang Gong, Qun Dai +1

College of Artificial Intelligence, Nanjing University of Aeronautics and Astronautics Nanjing, Jiangsu, China

Masked Autoencoders Self-Supervised Pre-Training EEG Decoding Invariant Representation Learning EEG Foundation Models

May 18, 2026eess.SP

Subject-Specific Analysis of Self-Initiated Attention Shifts from EEG with Controlled Internal and External Attention Conditions

Self-initiated attention shifts play a critical role in voluntary behavior but are difficult to study due to the absence of explicit temporal markers. While previous studies have examined their neural correlates, it remains unclear how multi-dimensional electroencephalography (EEG) features contribute to their characterization within an interpretable computational framework. In this study, we build on an experimental paradigm developed in our previous work, which enables controlled comparison between task-constrained self-initiated shifts and externally instructed shifts under identical visual stimulation. Within this setting, we investigate whether preparatory EEG activity can distinguish these two types of attention shifts. We adopt a machine learning-based approach and conduct two complementary analyses: (1) a performance-oriented assessment of frequency-specific topographic patterns, and (2) a model-based feature attribution analysis using SHapley Additive exPlanations (SHAP). These analyses provide a structured view of how spectral features across regions of interest contribute to model behavior. Our results demonstrate reliable within-subject classification performance, indicating that preparatory EEG activity contains subject-specific discriminative information within this paradigm. The analysis shows that higher-frequency bands and frontal regions contribute strongly to model decisions, although such contributions should be interpreted cautiously due to the potential influence of non-neural artifacts in high-frequency EEG signals. Overall, this work highlights the value of interpretable machine learning for analyzing subject-specific EEG signal patterns in a controlled experimental setting, with potential applications in personalized and asynchronous brain-machine interface systems.

Yuwen Zeng, Dengzhe Hou, Zhang Zhang +4

Advanced Institute of Convergence Knowledge Informatics, Tohoku University, Japan · Graduate School of Information Sciences, Tohoku University, Japan · Center for Data-Driven Science and Artificial Intelligence, Tohoku University, Japan +1

Electroencephalography EEG Decoding

May 18, 2026cs.AI

Visualizing the Invisible: Generative Visual Grounding Empowers Universal EEG Understanding in MLLMs

Leveraging the universal representations of pre-trained LLMs and MLLMs offers a promising path toward brain foundation models. However, visually-evoked EEG datasets remain scarce, leading existing methods to align neural signals mainly with abstract text, a lossy translation that may discard fine-grained perceptual information encoded in brain activity. We propose Generative Visual Grounding (GVG), a framework that visualizes the invisible by using an EEG-to-image generative model as a visual translator. Instead of forcing EEG into text alone, GVG hallucinates instance-specific proxy images for non-visual EEG, providing structured visual contexts that allow MLLMs to exploit their visual priors for clinical-state interpretation. We validate this idea on two MLLM backbones, GVG-X-Omni and GVG-Janus. Image-only alignment is already competitive: the lightweight GVG-X-Omni matches 1.7B-parameter text-aligned baselines while tuning only 170M parameters on a frozen 7B backbone. We further extend GVG-Janus with trimodal Image+Text alignment, where text supplies categorical semantic anchors and visual proxies enrich neural representations with perceptual details. Experiments show consistent gains in EEG understanding and visual generation, suggesting visual proxy grounding as an effective complement to textual alignment.

Jun-Yu Pan, Yansen Wang, Enze Zhang +3

Shanghai Jiao Tong University Shanghai, China · Microsoft Research Asia Shanghai, China

EEG Decoding EEG-Based Visual Decoding Multimodal Large Language Models Vision-Language Grounding EEG Foundation Models

May 17, 2026cs.LG

Beyond Accuracy: Robustness, Interpretability and Expressiveness of EEG Foundation Models

EEG foundation models (EEG-FMs) have been evaluated predominantly on clean, in-distribution accuracy, demonstrating modest gains over supervised baselines and weak frozen representations. This study examines whether these conclusions hold beyond clean accuracy by evaluating six EEG-FMs and a supervised baseline across ten datasets along three layers of analysis: (i) Robustness: we apply test-time perturbations including additive noise, random and region-based channel dropout and region-specific noise injection. Our analyses show that no single model dominates all failure modes. The most noise-robust model is among the most fragile under channel dropout and much of the dropout fragility disappears when channels are removed rather than zero-padded. (ii) Interpretability: using attribution methods in EEG-FMs, we show that models broadly concentrate relevance on task-appropriate brain regions consistent with known neurophysiology. (iii) Expressiveness: we demonstrate that the poor head-only performance previously attributed to low-quality pre-trained representations is largely explained by the pooling strategy and that EEG-FMs possess sufficient representational capacity when their token-level embeddings are preserved. Furthermore, with block-wise probing and attention analysis we show that late blocks are repurposed during fine-tuning, while early blocks already hold task-related information. Our results show that conclusions about EEG-FMs depend on evaluation choices and we recommend that future evaluation of EEG-FMs should report robustness per perturbation type, produce attribution maps and examine multiple pooling strategies.

Urban Širca, Maryam Alimardani, Stefanos Zafeiriou +1

Vrije Universiteit Amsterdam · Imperial College London

EEG Decoding Neural Network Interpretability Neural Network Expressivity EEG Foundation Models

May 17, 2026cs.AI

RAG-based EEG-to-Text Translation Using Deep Learning and LLMs

The decoding of linguistic information from electroencephalography (EEG) signals remains an extremely challenging problem in brain-computer interface (BCI) research. In particular, sentence-level decoding from EEG is difficult due to the low signal-to-noise ratio of these recordings. Previous studies tackling this problem have typically failed to surpass random baseline performance unless teacher forcing is used during the inference phase. In this work, we propose a retrieval-augmented generation (RAG)-based sentence-level EEG-to-text decoding pipeline that combines an EEG encoder aligned with semantic sentence embeddings, a vector retrieval stage, and a large language model (LLM) to refine retrieved sentences into coherent output. Experiments are conducted on the Zurich Cognitive Language Processing Corpus (ZuCo) dataset, which contains single-trial EEG recordings collected during silent reading. To evaluate whether the system extracts meaningful information from these EEG signals, the results are compared with a random baseline. In nine subjects, the proposed pipeline outperforms the random baseline, achieving a mean cosine similarity of 0.181 +- 0.022 compared to 0.139 +- 0.029 for the baseline, corresponding to a relative improvement of 30.45%. Statistical analysis further confirms that this improvement is significant, following a strict evaluation workflow where inference is performed without access to ground-truth labels.

Enrico Collautti, Xiaopeng Mao, Luca Tonin +2

IAS-LAB, Department of Information Engineering, University of Padova, 35122 Padova (PD), Italy · Department of Health Technology, Technical University of Denmark, 2800 Kgs. Lyngby, Denmark · Padova Neuroscience Center, 35131 Padova (PD), Italy.

Retrieval-Augmented Generation Brain-Computer Interfaces EEG Decoding

May 17, 2026eess.SP

Cross-Subject Intracranial EEG Reconstruction from Scalp Recordings Using Multi-Scale Cross-Attention Transformers

Intracranial EEG (iEEG) provides high-fidelity neural recordings essential for clinical and brain-computer interface applications, but acquiring these signals requires invasive surgery. While recent studies have attempted to estimate iEEG from non-invasive scalp EEG, most rely on patient-specific models, creating a circular dependency: if surgery is required to collect training data, the non-invasive model offers limited practical benefit. In this study, we address the challenge of cross-subject iEEG reconstruction by predicting intracranial signals for unseen patients using models trained on other individuals. We propose CAST (Cross-Attention Spatial-Temporal Transformer), a machine learning framework that translates scalp EEG into multi-channel iEEG waveforms through a two-stage transfer learning strategy. First, a temporal encoder extracts multi-scale neural representations at three different resolutions. Then, because electrode placements vary substantially across patients, a channel-aware decoder is calibrated using only a few minutes of data from the target subject. We evaluated the proposed method using leave-one-subject-out cross-validation on two public datasets comprising 1,282 iEEG channels. Experimental results demonstrate that CAST reconstructs cortical signals located near the scalp surface substantially better than deep subcortical activity. In highly observable sensorimotor regions, the model achieved peak correlations of up to r=0.864 in the precentral gyrus. Furthermore, with a channel selection strategy, CAST obtained a mean correlation of r=0.545 on viable subjects, outperforming previous within-subject baselines. These findings indicate that cortical iEEG signals can be reconstructed for unseen subjects from scalp EEG without extensive patient-specific training, and that only a brief calibration phase is sufficient to adapt the model to new hardware configurations.

Tien-Dat Pham, Xuan-The Tran

HAI-Smartlink Research Lab, Anchi STE Company, Haiphong, Vietnam · School of Mechanical Engineering, Vietnam Maritime University, Haiphong, Vietnam

Cross-Subject EEG Decoding Electroencephalography EEG Decoding Transfer Learning

May 14, 2026eess.SP

BCI-Based Assessment of Ocular Response Time Using Dynamic Time Warping Leveraging an RDWT-Driven Deep Neural Framework

Mild traumatic brain injury (mTBI) is a prevalent condition that remains difficult to diagnose in its early stages. Oculomotor dysfunction is a well-established marker of mTBI, motivating the development of portable tools that capture both eye-movement behavior and underlying neurophysiology. In this work, we present an initial framework that integrates electroencephalogram (EEG) with augmented-reality (AR)-based Vestibular/Ocular Motor Screening (VOMS) tasks to estimate subject-specific ocular response times. Pre-processed EEG signals, obtained through band-pass filtering and average referencing, are analyzed using a Redundant Discrete Wavelet Transform (RDWT)-driven deep neural framework. The RDWT coefficients are subjected to trainable zero-phase convolutional filtering and reconstructed into the time domain via inverse RDWT, followed by channel-wise temporal and spatial filtering using 2D convolution layers and convolutional-LSTM-based decoding. An ablation study demonstrates that wavelet-domain filtering serves as an effective denoising strategy, improving prediction performance. Sliding-window predictions were validated using Pearson correlation (>= 0.5), and Dynamic Time Warping (DTW) was subsequently used to estimate ocular response times. DTW-derived metrics revealed significant inter-subject differences across all VOM tasks, supported by Mann-Whitney U tests. Cross-correlation analysis further revealed task-dependent temporal behaviors: pursuit tasks exhibited reactive tracking, whereas saccades showed anticipatory responses. Overall, the results highlight pursuit tasks as particularly informative for distinguishing timing differences and demonstrate the potential of RDWT-based EEG features combined with DTW metrics for multimodal mTBI assessment.

Shantanu Sarkar, Sai Shashank Gandavarapu, Jeff Feng +3

Dept. of ECE, IUCRC BRAIN, Cullen College of Engineering University of Houston, Houston, USA · Dept. of Data Science, Cullen College of Engineering University of Houston, Houston, USA · Dept. of Industrial Design, IUCRC BRAIN, Gerald D.Hines College of Arch. & Design University of Houston, Houston, USA +1

May 14, 2026cs.LG

NeuroAtlas: Benchmarking Foundation Models for Clinical EEG and Brain-Computer Interfaces

Foundation models (FMs) promise to extract unified representations that generalize across downstream tasks. They have emerged across fields, including electroencephalography (EEG), but it is less clear how effective they are in this particular field. Published evaluations differ in datasets, in the EEG-specific preprocessing that might influence reported results, and in the reported metrics, frequently obscuring the clinical relevance in EEG. We introduce NeuroAtlas, the largest EEG benchmark to date: 42 datasets and 260k hours covering clinical EEG (epilepsy, sleep medicine, brain age estimation) and brain-computer interfaces, and include multiple datasets per task along with bespoke clinical evaluation metrics. Besides evaluating EEG-FMs with respect to supervised baselines, we present results from generic time-series FMs. We report three findings. First, EEG-specific FMs do not consistently outperform time-series FMs, which have neither EEG-focused architectures nor been pretrained on EEG. Second, standard machine learning metrics are insufficient to assess clinical utility: thus, we thoroughly evaluate more appropriate measures such as the quality of event-level decision-making, hypnogram-derived features, and the brain-age gap in the domains of epilepsy, sleep, and brain age, respectively. Third, model rankings and performance can vary substantially within domains. We conclude that pretrained models perform largely on par, with only narrow advantages for a few, and that current models do not yet deliver on the promise of an out-of-the-box unified EEG model. NeuroAtlas exposes this gap and provides the datasets and metrics for the next generation of unified EEG FMs.

Konstantinos Kontras, Trui Osselaer, Stylianos G. Mouslech +12

KU Leuven · MIT

Electroencephalography Brain-Computer Interfaces EEG Decoding Time-Series Foundation Models EEG Foundation Models

May 13, 2026cs.LG

KAST-BAR: Knowledge-Anchored Semantically-Dynamic Topology Brain Autoregressive Modeling for Universal Neural Interpretation

While EEG foundation models have shown significant potential in universal neural decoding across tasks, their advancement remains constrained by the inadequacy modeling of complex spatiotemporal topology, as well as the inherent modality gap between low-level physiological signals and high-level textual semantics. To address these challenges, we propose a Knowledge-Anchored Semantically-Dynamic Topology Brain Autoregressive Model (KAST-BAR), which dynamically aligns physiological representations derived from multi-level brain topology with an expert-level semantic space. Specifically, we design a Dual-Stream Hierarchical Attention (DSHA) encoder that accurately captures the brain's intrinsic non-Euclidean topology by modeling local temporal dynamics with global spatial contexts. On this basis, a Knowledge-Anchored Semantic Profiler (KASP) is proposed to synthesize physically-grounded and instance-level textual profiles, which subsequently drive a Semantic Text-Aware Refiner (STAR) to dynamically reconstruct EEG representations using Latent Expert Queries. By conducting large-scale pre-training on 21 diverse datasets to build a foundation model, KAST-BAR effectively integrates expert-level medical knowledge into EEG signal representations, consistently achieving superior performance across six downstream tasks. Our code is available at https://github.com/KAST-BAR/KAST-BAR

Haoning Wang, Wenchao Yang, Shuai Shen +1

School of Automation Science and Electrical Engineering, Beihang University, Beijing, China. · School of Biological Science and Medical Engineering, Beihang University, Beijing, China. · State Key Laboratory of Virtual Reality Technology and Systems, Beihang University, Beijing, China. +1

EEG Decoding Multimodal Pretraining Representation Alignment EEG Foundation Models

May 12, 2026cs.AI

From Clever Hans to Scientific Discovery: Interpreting EEG Foundational Transformers with LRP

Emerging foundation models (FMs) in electroencephalography (EEG) promise a path to scale deep learning in diagnostics and brain-computer interfaces despite data scarcity, yet their opaque nature remains a barrier to wider adoption. We investigate attention-aware Layer-wise relevance propagation (LRP) as a post-hoc attribution method for EEG-FMs, extending LRP's use on convolutional neural network (CNN)-based EEG models to the Transformer architectures that current FMs are based on. We find that LRP can both verify EEG-FM decisions and surface novel, biologically plausible hypotheses from them. In motor imagery, it unmasks 'Clever Hans' behavior where models prioritize task correlated ocular signals over the intended motor correlates. In a naturalistic paradigm for affect prediction, it reveals a recurring reliance on a central electrode cluster, suggesting a candidate sensorimotor signature of arousal. Though heatmap interpretation remains ambiguous in this complex domain, the results position LRP as a tool for both verification and exploration of EEG-FMs, a role that will grow in both importance and discovery potential as the underlying models mature.

Justus Meyer zu Bexten, Nico Scherf, Bogdan Franczyk +1

Center for Scalable Data Analytics and Artificial Intelligence (ScaDS.AI) Dresden/Leipzig, Leipzig University · Neural Data Science and Statistical Computing, Max Planck Institute for Human Cognitive and Brain Sciences · Faculty of Economics, Leipzig University +1

Transformer Interpretability EEG Decoding Layer-Wise Relevance Propagation EEG Foundation Models

May 11, 2026cs.LG

DANCE: Detect and Classify Events in EEG

Event identification in continuous neural recordings is a critical task in neuroscience. Decoding in EEG is dominated by classifying windows aligned to known event onsets. However, while available in controlled experiments, such onsets are absent in continuous real-world monitoring. Here, we introduce DANCE, a deep learning pipeline that frames neural decoding as a set-prediction problem and jointly detects and classifies events directly from raw, unaligned signals. Evaluated separately on ten datasets curated from the literature with a wide variety of event types (ranging from milliseconds to minutes in duration), our model outperforms existing methods on a broad range of cognitive, clinical and BCI tasks. This single architecture establishes a new state of the art in the competitive task of seizure monitoring and matches the accuracy of onset-informed models for BCI tasks. Overall, our method marks a step towards end-to-end asynchronous neural decoding models

Jarod Lévy, Hubert Banville, Jérémy Rapin +3

1Meta AI · 2Inria, Université Paris-Saclay, Palaiseau, France

Electroencephalography Brain-Computer Interfaces EEG Decoding Set Prediction Classification Structured Prediction

May 11, 2026cs.LG

Explainability of Recurrent Neural Networks for Enhancing P300-based Brain-Computer Interfaces

Brain-Computer Interfaces (BCIs) based on P300 event-related potentials offer promising applications in health, education, and assistive technologies. However, challenges related to inter- and intra-subject variability and the explainability of Deep Learning (DL) models limit their practical deployment. In this work, we present the Post-Recurrent Module (PRM), an additional layer designed to improve both performance and transparency, incorporated into a Recurrent Neural Network (RNN) architecture for classifying P300 signals from EEG data. Our approach enables a dual analysis of spatio-temporal signals through both global and local explainability techniques, allowing us not only to identify the most relevant brain regions and critical time intervals involved in classification, but also to interpret model decisions in terms of spatio-temporal EEG patterns consistent with well-stablished neurophysiological descriptions of the P300. Experimental results show a 9% improvement in performance over state of the art, while also revealing the importance of inter- and intra-subject variability, in alignment with established neuroscience literature. By making model decisions transparent and efficient, we present a framework for explainable EEG-based models. This framework is not limited to more efficient P300 detection, but can be generalized to a wide range of EEG-based tasks. Its ability to identify key spatial and temporal features makes it suitable for applications such as motor imagery, steady-state visual evoked potentials, and even cognitive workload assessment.

Christian Oliva, Vinicio Changoluisa, Francisco B Rodríguez +1

Grupo de Neurocomputación Biológica, Departamento de Ingeniería Informática, Escuela Politécnica Superior, Universidad Autónoma de Madrid, c/ Francisco Tomas y Valiente, 11, Madrid, 28049, Madrid, Spain · Grupo de Investigación en Electrónica y Telemática, Universidad Politécnica Salesiana, Campus el Girón, Ave 12 de Octubre 24-22, Quito, 170143, Quito, Ecuador

Brain-Computer Interfaces EEG Decoding Recurrent Neural Networks Neural Network Interpretability

May 11, 2026cs.LG

CFSPMNet: Cross-subject Fourier-guided Spatial-Patch Mamba Network for EEG Motor Imagery Decoding in Stroke Patients

Motor imagery electroencephalography (MI-EEG) decoding offers a non-invasive route for post-stroke rehabilitation, but cross-patient use remains difficult because pathological neural reorganization changes task-related EEG dynamics, aperiodic activity, local excitability, cross-regional coordination, and trial-level brain-state context. This makes source-learned MI representations unreliable for unseen patients. To address this problem, we propose CFSPMNet, a cross-patient adaptation framework that models post-stroke MI-EEG as latent neural-state organization. CFSPMNet combines a Fourier-Reorganized State Mamba Network (FRSM) with Shared-Private Prototype Matching (SPPM). FRSM represents each trial as a latent physiological token sequence, reorganizes token states in the Fourier domain, and uses Fourier-derived trial context to guide Mamba state-space propagation. SPPM improves target pseudo-label updating by combining semantic confidence with shared-private physiological consistency, filtering confident but physiologically inconsistent target predictions. Leave-one-subject-out experiments on two stroke MI-EEG datasets show that CFSPMNet outperforms representative CNN-, Transformer-, Mamba-, and adaptation-based baselines, achieving average accuracies of 68.23% on XW-Stroke and 73.33% on 2019-Stroke, with gains of 5.63 and 8.25 percentage points over the strongest competitors. Ablation, sensitivity, feature-alignment, pseudo-label selection, and neurophysiological visualization analyses further support the roles of Fourier-domain token-state reorganization and calibrated pseudo-label updating. These results suggest that latent neural-state modeling can improve rehabilitation-oriented cross-patient BCI decoding. Code is available at https://github.com/wxk1224/CFSPMNet.

Xiangkai Wang, Yun Zhao, Dongyi He +5

School of Artificial Intelligence, Chongqing University of Technology, Chongqing 401135, China; Chongqing Key Laboratory of Embodied Intelligence Perception and Autonomous Learning for Humanoid Robots; Key Laboratory of Advanced Equipment Intelligence of the Chongqing Education Commission, Chongqing 401135, China · School of Smart Health, Chongqing Polytechnic University of Electronic Technology, Chongqing 401131, China · Department of Language Science and Technology, The Hong Kong Polytechnic University, Hung Hom, Hong Kong SAR, China +1

Cross-Subject EEG Decoding Brain-Computer Interfaces Domain Adaptation EEG Decoding Frequency-Domain Feature Learning

May 8, 2026cs.LG

NeuralBench: A Unifying Framework to Benchmark NeuroAI Models

Deep learning and large public datasets have recently catalyzed the proliferation of AI models for processing brain recordings. However, systematically evaluating these models remains a challenge: not only do the preprocessing pipelines, training and finetuning approaches largely vary across studies, but their downstream evaluation is often limited to small sets of tasks and/or datasets. Here, we present NeuralBench: a unified framework for benchmarking AI models of brain activity. We accompany this framework with NeuralBench-EEG v1.0 -- a large EEG benchmark that includes 36 electroencephalography (EEG) tasks and 14 deep learning architectures, and is evaluated on 94 datasets accessed through a standardized interface. This first EEG-focused release already highlights two main findings. First, current foundation models only marginally outperform task-specific models. Second, a large set of tasks (e.g. cognitive decoding, clinical predictions) remain highly challenging, even for the best models. Critically, NeuralBench is designed for the integration of new tasks, datasets, models, and neuroimaging modalities, as illustrated by preliminary extensions to MEG and fMRI datasets and models. Through this white paper, we invite the community to expand this open-source framework and work together toward a unified benchmarking standard for neuroimaging models.

Hubert Banville, Stéphane d'Ascoli, Simon Dahan +12

Lucy · Brain & AI team, Meta FAIR · MIND, Inria +2

Benchmark Design EEG Decoding EEG Foundation Models

May 8, 2026cs.LG

Same Brain, Different Prediction: How Preprocessing Choices Undermine EEG Decoding Reliability

Electroencephalography (EEG) is a cornerstone of brain-computer interfaces and clinical neuroscience, yet deep learning models are typically trained and evaluated under a single, unreported preprocessing pipeline. We formalize preprocessing choices as a counterfactual intervention space and show that EEG predictions are surprisingly unstable under this space: across six datasets spanning four paradigms, up to 42% of trial-level predictions flip when only the preprocessing changes, a variability that standard uncertainty methods do not explicitly quantify because they condition on a fixed preprocessing pipeline. We provide three tools to make this instability measurable, decomposable, and reducible. First, a Walsh-Hadamard decomposition of the 2^7 pipeline space reveals that sensitivity is near-additive in practice under the binary intervention design, enabling efficient step-by-step optimization. Second, we introduce Preprocessing Uncertainty (PU), a per-trial diagnostic that captures a dimension of instability complementary to model-based confidence. Third, we study Normalized Adaptive PGI (NA-PGI), a graph-structured regularizer that exploits the compositional structure of preprocessing interventions as one mitigation strategy with clear scope conditions.

Dengzhe Hou, Zihao Wu, Lingyu Jiang +3

Tohoku University · University of Georgia · Texas A&M University +1

Uncertainty Quantification EEG Decoding

May 5, 2026cs.LG

Spatiotemporal Convolutions on EEG signal -- A Representation Learning Perspective on Efficient and Explainable EEG Classification with Convolutional Neural Nets

Classification of EEG signals using shallow Convolutional Neural Networks (CNNs) is a prevalent and successful approach across a variety of fields. Most of these models use independent one-dimensional (1D) convolutional layers along the spatial and temporal dimensions, which are concatenated without a non-linear activation layer between. In this paper, we investigate an alternative encoding that operates a bi-dimensional (2D) spatiotemporal convolution. While 2D convolutions are numerically identical to two concatenated 1D convolutions along the two dimensions, the impact on learning is still uncertain. We test 1D and 2D CNNs and a CNN+transformer hybrid model in a low-dimensional (3-channel) and a high-dimensional (22-channel) BCI motor imagery classification task. We observe that 2D convolutions significantly reduce training time in high-dimensional tasks while maintaining performance. We investigate the root of this improvement and find no difference in spectral feature importance. However, a clear pattern emerges in representational similarity across models: 1D and 2D models yield vastly different representational geometries. Overall, we suggest an improved model with a 2D convolutional layer for faster training and inference. We also highlight the importance of architecturally-driven encoding when processing complex multivariate signals, as reflected in internal representations rather than purely in performance metrics.

Laurits Dixen, Stefan Heinrich, Paolo Burelli

IT University of Copenhagen Denmark

Efficient Neural Network Inference MI Classification EEG Decoding Convolutional Neural Networks

Apr 29, 2026cs.LG

Cross-Subject Generalization for EEG Decoding: A Survey of Deep Learning Methods

Deep learning for cross-subject EEG decoding is hindered by high inter-subject variability, which introduces a severe domain shift between training and unseen test subjects. This survey presents a comprehensive review of deep learning methodologies specifically engineered to address this cross-subject generalization challenge. To ground this analysis, we formalize the cross-subject setting as a multi-source domain problem and delineate the rigorous, subject-independent evaluation protocols required for valid assessment. Central to this survey is a systematic taxonomy of the current literature into discrete methodological families, including feature alignment, adversarial learning, feature disentanglement, and contrastive learning. We conclude by examining three critical elements for advancing robust, real-world decoding: the theoretical limitations of current methodologies, the structural value of subject identity, and the emergence of EEG foundation models.

Taida Li, Yujun Yan, Fei Dou +2

Department of Computer Science, University of North Carolina at Charlotte, Charlotte, United States · Department of Computer Science, Dartmouth College, Hanover, United States · School of Computing, University of Georgia, Athens, United States +1

Cross-Subject EEG Decoding EEG Decoding Cross-Domain Generalization Representation Alignment

Apr 27, 2026cs.LG

Task-guided Spatiotemporal Network with Diffusion Augmentation for EEG-based Dementia Diagnosis and MMSE Prediction

Patients with dementia typically exhibit cognitive impairment, which is routinely assessed using the Mini-Mental State Examination (MMSE). Concurrently, their underlying neurophysiological abnormalities are reflected in Electroencephalography (EEG), providing a basis for joint modeling. However, traditional multi-task approaches suffer from feature entanglement, which leads to inter-task interference when handling heterogeneous objectives.To address this challenge, we propose a task-guided spatiotemporal network (TGSN) with diffusion augmentation for EEG-based dementia diagnosis and MMSE prediction. Specifically, TGSN integrates a multi-band feature fusion module to capture complementary spectral information from EEG. Meanwhile, a pre-trained data augmentation module utilizing a diffusion process is introduced toincrease sample diversity. To model the complex spatiotemporal patterns of EEG, we propose a gated spatiotemporal attention module that captures long-range spatial dependencies and temporal dynamics. Moreover, we design a task-guided query module to achieve task-specific feature extraction, thereby mitigating task interference. The effectiveness of TGSN is evaluated on the XY02 dataset. Experimental results demonstrate that the proposed network outperforms several state-of-the-art methods, achieving classification accuracies of 97.78% for Alzheimer's Disease (AD)/Frontotemporal Dementia (FTD) and 83.93% for AD/FTD/Vascular Cognitive Impairment (VCI), which exceed the best baselines by 16.39% and 8.28%, respectively. In parallel, it reduces the RMSE for MMSE prediction to 1.93 and 2.38, achieving significant error reductions of 1.44 and 1.43 compared to the best baselines. Additionally, validation on the DS004504 dataset demonstrates strong cross-dataset generalization...

Xiaoyu Zheng, Xu Tian, Bin Jiao +4

Alzheimer's Disease Electroencephalography EEG Decoding Multi-Task Learning Alzheimer's Disease Classification

Apr 25, 2026cs.LG

Channel Adaptation for EEG Foundation Models: A Systematic Benchmark Across Architectures, Tasks, and Training Regimes

Scaling EEG foundation models requires pooling data across heterogeneous electrode montages, a prerequisite both for larger pretraining corpora and for downstream deployment. We present the first systematic comparison of four channel adaptation methods (Conv1d projection, spherical spline interpolation (SSI), source-space decomposition, and Riemannian re-centering) across five pretrained EEG foundation models (5M--157M parameters), five downstream tasks, and two training regimes with 10--15 random seeds each. We find that rigid-montage models (BENDR, Neuro-GPT) require external adaptation, while flexible models (EEGPT, CBraMod) match or exceed it natively when fine-tuned but benefit from external methods under frozen-encoder deployment. A probe-SFT asymmetry exists: external adaptation can cause severe negative transfer during fine-tuning of flexible models. The optimal method is architecture-dependent (Conv1d for BENDR, SSI/Riemannian for Neuro-GPT, source-space decomposition for depression detection), and 5M-parameter CBraMod outperforms models up to 31

\times

larger on 4/5 datasets, consistent with independent findings that compact EEG-specific architectures can match larger models.

Kuntal Kokate, Bruno Aristimunha, Dung Truong +1

Swartz Center for Computational Neuroscience, Institute for Neural Computation, University of California San Diego, La Jolla, CA 92093, USA · Yneuro, Paris, France · Centre de Recherche Cerveau et Cognition, CNRS, Université Paul Sabatier, Toulouse, France

Fine-Tuning EEG Decoding Negative Transfer EEG Foundation Models

Apr 24, 2026eess.SP

NAKUL-Med: Spectral-Graph State Space Models with Dynamics Kernels for Medical Signals

State space models (SSMs) achieve linear-time complexity but struggle with multi-channel physiological signals due to three limitations: fixed kernels cannot capture multi-scale temporal dynamics (motor preparation over hundreds of milliseconds vs. execution transients in tens of milliseconds), Markovian state updates restrict global context for periodic oscillations, and channel-independent processing ignores spatial electrode topology. We introduce NAKUL, extending SSMs for medical signal analysis through three contributions: (1) Dynamic Kernel Generation-parallel SSM branches with varying kernel sizes (3, 5, 7, 11 timesteps) are weighted by a meta-network that analyzes input statistics, enabling adaptive temporal scale selection; (2) Spectral Context Modeling-FFT-based operations with learnable Gaussian frequency band filters capture global periodic patterns in

O(N \log N)

complexity; (3) Graph-Guided Spatial Attention-fixed electrode topology provides spatial biases to multi-head attention for principled cross-channel interaction. On BCI Competition IV-2a motor imagery (our primary benchmark), NAKUL achieves 91.7

\pm

0.6% accuracy, matching EEG-Conformer (92.1

\pm

0.7%) while using 28% fewer parameters (2.5M vs 3.5M) and 2.0

\times

faster inference (4.3ms vs 8.7ms). The model generalizes to EEG emotion recognition (83.6%), multimodal EEG-fMRI (91.4%), and medical imaging (92.8% on ultrasound), demonstrating architectural versatility. Ablations show dynamic kernels contribute +2.6% and exhibit interpretable scale selection patterns correlated with known neural dynamics.

Badri N. Patro, Vijay S. Agneeswaran

Microsoft

Electroencephalography Neural Decoding EEG Decoding Frequency-Domain Feature Learning State Space Models

Apr 22, 2026eess.SP

Leakage-Audited Benchmarking Reveals Limited Evidence for Cross-Subject Auditory-Evoked EEG Vowel Perception Decoding

We tested whether auditory-evoked EEG supports subject-independent five-vowel perception decoding when trial identity, model identity, prediction provenance, and participant-level inference are controlled within a single benchmark. We reconstructed Study 2 event tables from OpenNeuro ds006104 version 1.0.1 and analysed the consonant-vowel pair task. One-to-one marker-stimulus pairing yielded 3,840 independent trials; control-condition selection and artifact rejection retained 1,094 epochs from 16 participants and 61 EEG channels. Thirteen unique implementations were evaluated using leave-one-subject-out testing, with participant metrics reconstructed from 36,102 trial predictions across 33 complete prediction replicas. Random Forest was numerically highest at 21.474% balanced accuracy (95% participant-bootstrap interval, 19.526-23.482%; chance, 20%), but neither its participant-level tests nor any implementation survived correction across the 13-model family. Deep-model performance was close to chance, and several architectures showed substantial seed-dependent variation and low trial-label agreement. An exploratory MDM analysis comprising 9,616 genuine refits across training cohorts of 3-15 participants showed no monotonic performance gain. Within this dataset and protocol, evidence for reliable cross-subject five-vowel decoding is limited. The benchmark provides a reproducible chain from source rows to retained epochs, predictions, participant-level metrics, multiplicity-adjusted inference, and bounded diagnostic analyses.

Xiaoyang Li, Zeyan Tao

College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, 110016, China

Cross-Subject EEG Decoding Electroencephalography Neural Decoding EEG Decoding

Apr 21, 2026cs.CV

Mind2Drive: Predicting Driver Intentions from EEG in Real-world On-Road Driving

Predicting driver intention from neurophysiological signals offers a promising pathway for enhancing proactive safety in advanced driver assistance systems, yet remains challenging in real-world driving due to EEG signal non-stationarity and the complexity of cognitive-motor preparation. This study proposes and evaluates an EEG-based driver intention prediction framework using a synchronised multi-sensor platform integrated into a real electric vehicle. A real-world on-road dataset was collected across 32 driving sessions, and 12 deep learning architectures were evaluated under consistent experimental conditions. Among the evaluated architectures, TSCeption achieved the highest average accuracy (0.907) and Macro-F1 score (0.901). The proposed framework demonstrates strong temporal stability, maintaining robust decoding performance up to 1000 ms before manoeuvre execution with minimal degradation. Furthermore, additional analyses reveal that minimal EEG preprocessing outperforms artefact-handling pipelines, and prediction performance peaks within a 400-600 ms interval, corresponding to a critical neural preparatory phase preceding driving manoeuvres. Overall, these findings support the feasibility of early and stable EEG-based driver intention decoding under real-world on-road conditions. Code: https://github.com/galosaimi/Mind2Drive.

Ghadah Alosaimi, Hanadi Alhamdan, Wenke E +3

Department of Computer Science, Imam Mohammad Ibn Saud Islamic University, Saudi Arabia · Department of {2Computer Science, 3Engineering}, Durham University, UK · Department of Computer Science, Princess Nourah bint Abdulrahman University, Saudi Arabia

Electroencephalography EEG Decoding Autonomous Driving

Apr 21, 2026eess.SP

Foundation Model Guided Dual-Branch Co-Adaptation for Source-Free EEG Decoding

Source-free domain adaptation (SFDA) provides a practical solution to cross-subject EEG decoding by adapting source-pretrained models to unlabeled target domains without accessing source data. However, existing SFDA methods rely solely on the limited internal knowledge of source-pretrained models, leading to inferior cross-domain generalization and unreliable pseudo-labels. Although EEG Foundation Models (FMs) pretrained on large-scale data exhibit strong generalizability, their potential in SFDA remains largely unexplored. To this end, we propose FUSED, a Foundation-guided Source-free EEG Decoding framework that integrates a large-scale FM with a compact Specialist Model (SM) via dual-branch co-adaptation. Specifically, we introduce a Co-adaptation mechanism equipping both branches with linear and prototype views, enabling cross-branch pseudo-label generation. Additionally, we design a Consensus Filtering Mechanism that exploits the FM's inherent stability to identify high-quality samples, along with a Two-Stage Pseudo-Label Refinement scheme to suppress error accumulation through cross-branch arbitration. Finally, we calibrate the FM's decision boundaries via mutual information maximization with the SM, followed by knowledge distillation from FM to SM, forming a principled calibrate-then-distill pipeline. To our knowledge, FUSED is the first work to leverage EEG FMs within the SFDA framework for cross-subject EEG decoding. Extensive experiments across three EEG paradigms, including motor imagery, emotion recognition, and SSVEP, demonstrate consistent state-of-the-art performance, validating the effectiveness of foundation-guided synergy for robust and privacy-preserving EEG decoding.

Peiliang Gong, Han Zhang, Zhen Jiang +5

College of Computing and Data Science, Nanyang Technological University, 50 Nanyang Avenue, 639798, Singapore · College of Artifical Intelligence and Automation, Hohai University, Changzhou 213022, China · College of Artificial Intelligence, Nanjing University of Aeronautics and Astronautics, Nanjing 211106, China +2

Cross-Subject EEG Decoding Source-Free Domain Adaptation EEG Decoding EEG Foundation Models

Apr 21, 2026eess.SP

One-Block Transformer (1BT) for EEG-Based Cognitive Workload Assessment

Accurate and continuous estimation of cognitive workload is fundamental to creating adaptive human-machine systems. However, designing architectures that balance representational capacity with computational efficiency has been challenging for practical deployment. This paper introduces 1BT, a One-Block Transformer for compact and efficient EEG-based cognitive workload assessment. The model aggregates multi-channel temporal sequences via a minimal latent bottleneck, using a single cross-attention module followed by lightweight self-attention. A controlled study involving 11 participants performing three cognitively diverse tasks (abstract reasoning, numerical problem-solving, and an interactive video game) was conducted with continuous EEG recordings across two workload levels. Systematic architectural analysis identifies the most compact configuration that preserves high performance, while substantially lowering computational cost. The final model achieves high workload classification performance with under 0.5 million parameters and 0.02 GFLOPs, paving the way for a design direction for real-time cognitive workload monitoring in resource-constrained settings.

Stefanos Gkikas, Christian Arzate Cruz, Thomas Kassiotis +3

Honda Research Institute Japan · Wako City, Japan · Department of Electronic Engineering +6

Efficient Neural Network Inference Transformer EEG Decoding

Apr 20, 2026cs.HC

EEG-Based Emergency Braking Intensity Prediction Using Blind Source Separation

Electroencephalography (EEG) signals have been promising for long-term braking intensity prediction but are prone to various artifacts that limit their reliability. Here, we propose a novel framework that models EEG signals as mixtures of independent blind sources and identifies those strongly correlated with braking action. Our method employs independent component analysis to decompose EEG into different components and combines time-frequency analysis with Pearson correlations to select braking-related components. Furthermore, we utilize hierarchical clustering to group braking-related components into two clusters, each characterized by a distinct spatial pattern. Additionally, these components exhibit trial-invariant temporal patterns and demonstrate stable and common neural signatures of the emergency braking process. Using power features from these components and historical braking data, we predict braking intensity at a 200 ms horizon. Evaluations on the open source dataset (O.D.) and human-in-the-loop simulation (H.S.) show that our method outperforms state-of-the-art approaches, achieving RMSE reductions of 8.0% (O.D.) and 23.8% (H.S.).

Zikun Zhou, Wenshuo Wang, Wenzhuo Liu +5

School of Mechanical Engineering, Beijing Institute of Technology, Beijing, China

Independent Component Analysis EEG Decoding