Electron Microscopy

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36 papers6 papers in the last four weeks, level with the four weeks before. 0.0% of all new papers.

  1. CryoTracer: A Synthetic-to-Real System for Filament Instance Tracing in Cryo-EM

    Oct 13, 2026Radosław Kuczbański, Wojciech Kozłowski, Mateusz Grzesiuk +4Electron MicroscopyCryo-Electron Microscopy

    WUST, Poland · ETH Zurich, Switzerland · Tooploox, Poland

  2. Patch-based Querying Identifies Structures of Interest in Electron Microscopy

    Oct 5, 2026Niels Vyncke, Nicolas Nadisic, Yvan Saeys +1Image RetrievalMicroscopy Image Analysis

    Department of Telecommunications and Information Processing, Sint-Pietersnieuwstraat 41, Ghent, 9000, Belgium · Royal Institute for Cultural Heritage (KIK-IRPA), Jubelpark 1, Brussels, 1000, Belgium · Department of Mathematics, Computer Science and Statistics, Krijgslaan 281, Ghent, 9000, Belgium

  3. Fold'EM: Direct atomic structure inference from Cryo-EM particles

    Oct 1, 2026Advaith Maddipatla, Märt-Erik Mäeots, Marco Pegoraro +5Cryo-Electron MicroscopyElectron Microscopy

    Institute of Science and Technology Austria · University of Zurich · Frankfurt Institute for Advanced Studies +2

  4. Atelier: Learning Local Self-Supervised Features for CryoEM Volumes via Hypernetworks

    Sep 24, 2026Phillip Lo, Sudarshan Babu, Dari Kimanius +13D Representation LearningCryo-Electron Microscopy

    Biohub Chicago, IL · University of Chicago, Biohub Chicago, IL

  5. Real-Time Atomic-Resolution Electron Phase Imaging without Probe Calibration via Ptychography-Supervised Learning

    Sep 22, 2026H. Yue, C. -C. Chen, C. -N. Hsiao +4Supervised LearningElectron Microscopy

    College of Intelligent Robotics and Advanced Manufacturing, Fudan University, Shanghai 200433, China. · Department of Engineering and System Science, National Tsing Hua University, Hsinchu 300044, Taiwan · National Center for Instrumentation Research, National Institutes of Applied Research, Hsinchu 300092, Taiwan +3

  6. SomaNet: Weakly Supervised Learning for Instance Soma Segmentation in 3D Electron Microscopy with Partial Annotations

    Sep 19, 2026Mohammad Khateri, Morteza Ghahremani, Jussi Tohka +1Electron MicroscopyInstance Segmentation

    A. I. Virtanen Institute for Molecular Sciences, Faculty of Health Sciences, University of Eastern Finland, Finland

  7. Catena: A Comprehensive Software Suite for Large-Scale Connectomics

    Sep 18, 2026Samia Mohinta, Pedro Gómez-Gálvez, Shi Yan Lee +5Electron MicroscopyMicroscopy Image Analysis

    Dept. of Physiology, Development and Neuroscience, University of Cambridge, UK · MRC Laboratory of Molecular Biology, UK · HHMI Janelia, USA +1

  8. Adapting Open-Weight MLLMs to Generate Point Prompts for Electron Microscopy Segmentation

    Sep 12, 2026Samia Mohinta, Albert CardonaElectron MicroscopyVLM Adaptation

    University of Cambridge, Cambridge, UK · MRC Laboratory of Molecular Biology, Cambridge, UK

  9. FPicker: Topology-Guided Evolution for Filament Tracing in Low-SNR Microscopy

    Sep 8, 2026Tingyin Zhao, Mingtao Huang, Yuan ShenCryo-Electron MicroscopyMicroscopy Image Analysis

    Department of Electronic Engineering, Tsinghua University, Beijing, China · Beijing National Research Center for Information Science and Technology, Beijing, China

  10. Scalable Bayesian Optimization of Composite Functions for Image-Based Inverse Problems in Materials Characterization

    Sep 2, 2026Dasol Yoon, Poompol Buathong, Chia-Hao Lee +3Electron MicroscopyBayesian Optimization

    School of Applied and Engineering Physics, Cornell University, Ithaca, NY 14853, USA · Department of Materials Science and Engineering, Cornell University, Ithaca, NY 14853, USA · Center for Applied Mathematics, Cornell University, Ithaca, NY 14853, USA +2

  11. TopoFuse: Topology-Aware Tri-Planar Fusion for 3D Cryo-Electron Tomography Segmentation

    Aug 31, 2026Rohit Kumar Salla, Neelesh Gupta, Xingjian Li +1Topology-Preserving Image SegmentationImage Segmentation

    Virginia Tech, Blacksburg, VA, USA · National Institute of Technology, Kurukshetra, India · Carnegie Mellon University, Pittsburgh, PA, USA

  12. Reconstruction-Aware Cryo-EM Particle Picking

    Aug 28, 2026Riku Itsuji, Yuanhao Wang, Xingjian Li +3Cryo-Electron MicroscopyElectron Microscopy

    Keio University, Yokohama, Japan · Keio AI Research Center, Yokohama, Japan · Carnegie Mellon University, Pittsburgh, PA, USA

  13. A meta-algorithm for ab initio reconstruction of complex mixtures in cryo-EM

    Aug 26, 2026Alkin Kaz, Arda Kaz, Ellen D. ZhongCryo-Electron MicroscopyElectron Microscopy

    Princeton University · University of California, Berkeley

  14. An Interactive, Automated 4D-STEM data acquisition and analysis routine for Scanning Electron Nanobeam Diffraction and Ptychography experiments

    Aug 13, 2026Mohsen Danaie, Max England, Yiming Xu +11Electron MicroscopyScientific Workflow Automation

  15. Physics-Aligned Self-Supervised Learning for Scientific Imaging

    Jul 30, 2026Bashir Kazimi, Stefan SandfeldElectron MicroscopyData Augmentation

    Institute for Materials Data Science and Informatics (IAS-9), Forschungszentrum Jülich GmbH, 52425, Jülich, Germany · Chair of Materials Data Science and Materials Informatics, Faculty 5 – Georesources and Materials Engineering, RWTH Aachen University, 52056, Aachen, Germany

  16. Frequency-Aware Dual-Stream Learning for Balanced Realism and Fidelity in Electron Microscopy Imaging

    Jul 24, 2026Longmi Gao, Zhengkai Zhao, Pan Gao +1Diffusion Models for Image RestorationMicroscopy Image Analysis

    College of Artificial Intelligence, Nanjing University of Aeronautics and Astronautics, Nanjing, 211106, China. · School of computing, Mathematics, and Engineering, Charles Sturt University, NSW, Australia.

  17. Mapping Order in Semicrystalline Polymers using Machine Learning of Nanobeam Electron Diffraction

    Jul 18, 2026Nicholas Marchese, Arthur R. C. McCray, Yael Tsarfati +4Materials ScienceElectron Microscopy

    Department of Materials Science and Engineering, Stanford University, 496 Lomita Mall, Stanford, CA 94305, USA · SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA · National Center for Electron Microscopy, Molecular Foundry, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA

  18. The evolution of AI from image interpretation toward scientific inference in nanoparticle electron microscopy

    Jul 11, 2026Evropi Toulkeridou, Jiafei Li, Leonardo Lari +1Materials ScienceMicroscopy Image Analysis

    Statistical Analysis and Optimal Design of Experiments Group, Department of Mathematics, University of Castilla-La Mancha, 45071 Toledo, Spain · Materials Science and Engineering, Guangdong Technion – Israel Institute of Technology, Shantou, Guangdong 515063, China · LAME Laboratory, Area Science Park Campus di Basovizza, SS14, KM163.5, 34149, Trieste, Italy +2

  19. STEMGym: Benchmarking Sequential Decision-Making under Dose Budgets in Autonomous Electron Microscopy

    Jun 28, 2026Can Polat, Erchin Serpedin, Mustafa Kurban +1Scanning Transmission Electron MicroscopyAutonomous Experimentation

    Dept. of Electrical & Computer Eng. Texas A&M Univ. College Station, TX, USA · Dept. of Prosthetics & Orthotics College of Science & Eng. Ankara Univ., Ankara, Turkey · Hamad Bin Khalifa Univ. and Texas A&M Univ. at Qatar Doha, Qatar

  20. μμMatch: Foundation Models for Semi-supervised Learning and Domain Adaptation in EM

    Jun 19, 2026Marei Freitag, Olesia Korchevaia, Luca Freckmann +2Electron MicroscopyUnsupervised Domain Adaptation

    Life and Medical Sciences Institute (LIMES), University of Bonn, Germany · Institute of Computer Science, Georg-August-University Göttingen, Germany

  21. Unsupervised Deep Learning for Limited-Angle STEM-EDX Tomography -- Application to 3D Chemical Analysis of Phase-Change Memory Devices

    Jun 9, 2026Daniel del Pozo Bueno, Serge Brosset, Theo Monniez +3Deep Image PriorImage Reconstruction

    1CEA, LETI, Univ. Grenoble Alpes, Grenoble, 38000, France. · 2CEA, Neurospin, Paris-Saclay University, Gif-sur-Yvette, F-91191, France. · 3Inria, MIND, Palaiseau, F-91210, France.

  22. POPSICLE: Benchmark Datasets for Segmentation and Localization in CryoET

    Jun 8, 2026Jonathan Schwartz, Utz Heinrich Ermel, C. Braxton Owens +6Image SegmentationCryo-Electron Microscopy

    1Biohub, Redwood City, CA 94063, USA · 2Brigham Young University, Provo, UT, 84602, USA

  23. Unsupervised Deep Image Prior for Sparse-View and Limited-Angle Electron Tomography

    May 26, 2026Serge Brosset, Daniel del Pozo Bueno, Thomas David +3Deep Image PriorSparse-View CT Reconstruction

    a Univ. Grenoble Alpes, CEA, Leti, F-38000 Grenoble, France. · b Univ. Grenoble Alpes, CEA, Liten, F-38000 Grenoble, France. · c CEA, Joliot, NeuroSpin, Gif-sur-Yvette Cedex 91191, France. +1

  24. Contrastive Image-Metadata Pre-Training for Materials Transmission Electron Microscopy

    Apr 27, 2026Georgia Channing, Debora Keller, Marta D. Rossell +3Cross-Modal AlignmentMultimodal Contrastive Learning

    Hugging Face · University of Oxford · Empa Dübendorf +1

  25. Score-Based Matching with Target Guidance for Cryo-EM Denoising

    Apr 20, 2026Xiaoqi Wu, Xueying Zhan, Wen Li +3Cryo-Electron MicroscopyScore-Based Generative Modeling

    Carnegie Mellon University · Towson University

  26. A Mixture of Experts Foundation Model for Scanning Electron Microscopy Image Analysis

    Apr 7, 2026Sk Miraj Ahmed, Yuewei Lin, Chuntian Cao +9Microscopy Image AnalysisElectron Microscopy

    Computing and Data Sciences, Brookhaven National Laboratory, Upton, 11973, New York, USA. · Center for Functional Nanomaterials, Brookhaven National Laboratory, Upton, 11973, New York, USA. · Department of Material Sciences and Engineering, The University of Texas at Dallas, Richardson, 75080, Texas, USA.

  27. PATHFINDER: Multi-objective discovery in structural and spectral spaces

    Apr 5, 2026Kamyar Barakati, Boris N. Slautin, Utkarsh Pratiush +2Autonomous ExperimentationMulti-Objective Optimization

    Department of Materials Science and Engineering, University of Tennessee, Knoxville, TN, USA · Department of Materials Science and Engineering, Institute of Science Tokyo, Yokohama, Japan

  28. SAGE-GAN: Towards Realistic and Robust Segmentation of Spatially Ordered Nanoparticles via Attention-Guided GANs

    Apr 4, 2026Anindya Pal, Varun Ajith, Saumik Bhattacharya +1Electron MicroscopyImage Segmentation

    National Institute of Technology Durgapur, Department of Physics · Indian Institute of Technology Kharagpur

  29. Statistical Characteristic-Guided Denoising for Rapid High-Resolution Transmission Electron Microscopy Imaging

    Mar 19, 2026Hesong Li, Ziqi Wu, Ruiwen Shao +1Scanning Transmission Electron MicroscopyImage Denoising

    Beijing Institute of Technology

  30. Novelty-Driven Target-Space Discovery in Automated Electron and Scanning Probe Microscopy

    Mar 17, 2026Utkarsh Pratiush, Kamyar Barakati, Boris N. Slautin +4Deep Kernel LearningScanning Transmission Electron Microscopy

    Department of Materials Science and Engineering, University of Tennessee, Knoxville, TN 37996, USA · Department of Chemistry, University of Washington, Seattle, WA 98195, USA · Pacific Northwest National Laboratory, Richland, WA 99354, USA