Antimicrobial Peptide

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5 papers in the last four weeks, level with the four weeks before. 0.1% of all new papers.

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  1. Mirror-Score: Calibrated, Inference-only Scoring Exposes the Limits of Sequence-compatibility Ranking in D-peptide Design

    Sep 28, 2026Jiada LiProtein DesignAntimicrobial Peptide

    AI Scientist, Albany, NY, USA, 12205

  2. Earth Surface Immune System for Rapid Monitoring of Unknown Anomalies

    Sep 17, 2026Jingtao Li, Qian Zhu, Xinyu Wang +3Logical AnomaliesSatellite Imagery

    State Key Laboratory of Information Engineering in Surveying, Mapping and Remote Sensing, Wuhan University, P. R. China. · School of Remote Sensing and Information Engineering, Wuhan University, P. R. China.

  3. Sharpness-Aware Minimization (SAM) Improves Classification Accuracy of Bacterial Raman Spectral Data Enabling Portable Diagnostics

    Sep 16, 2026Kaitlin Zareno, Jarett Dewbury, Siamak K. Sorooshyari +2RamanAntimicrobial Peptide

    Department of Mechanical Engineering MASSachusetts Institute of Technology Cambridge, MA 02139, USA · Department of Statistics Stanford University Palo Alto, CA 94305, USA · Google Research Mountain View, CA 94043, USA

  4. Adaptive Chemotherapy Control under Tumor Heterogeneity via Reinforcement Learning

    Sep 14, 2026Bereket Sitotaw Kidane, Md Samiul Haque Motayed, Shuo WangDoseDeep Q-Networks

    Department of Mechanical and Aerospace Engineering, University of Texas at Arlington, Arlington, TX 76019, USA

  5. CliffRank: A Dual-Branch Framework for Activity-Cliff Ranking Prediction

    Sep 1, 2026Kewei Li, Rongying Zhang, Peiyu Yang +4Antimicrobial PeptideSpearman Correlation

    College of Computer Science and Technology, Jilin University, Changchun, 130012, China. · Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education, Jilin University, Changchun, 130012, China. · Greenwich High School, Greenwich, CT, 06830, United States of America. +3

  6. Coarse composition suffices: tabular in-context learning for multi-activity antimicrobial peptide profiling

    Aug 31, 2026Raunak Kumar, Anuj Pal, Dhruvi Solanki +3Antimicrobial PeptideMulti-Label Classification

    Department of Electronics and Communication Engineering, Indian Institute of Technology Roorkee, Roorkee 247667, Uttarakhand, India · Department of Bioengineering, Indian Institute of Science, Bengaluru 560012, Karnataka, India · Department of Electrical Engineering, Indian Institute of Technology Roorkee, Roorkee 247667,2026 Uttarakhand, India +1

  7. A corpus-specific clinical RAG system matches or outperforms newer frontier LLMs on HealthBench

    Aug 12, 2026Praveen Reddy, Charuta Mandke, Suvrankar Datta +4Clinical Reasoning TrainingDiagnostic Benchmark

  8. Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models

    Aug 7, 2026Doniyorkhon Obidov, Xiaolong Guo, Yonghui Li +1Antimicrobial PeptideFewer Surprising Backdoors

    Michigan Technological University · Lehigh University · Kansas State University

  9. A Unified Causal Inference Framework for the Desirability of Outcome Ranking Paradigm in Benefit-Risk Evaluation

    Aug 5, 2026Yuan Feng, Shiyu Shu, Yixin Fang +4Heterogeneous Treatment EffectsCausal Inferences

    Department of Biostatistics and Bioinformatics, The George Washington University, Washington, DC, USA · The Biostatistics Center, The George Washington University, Washington, DC, USA · AbbVie Inc., USA

  10. AgentAntibody: An Adaptive Immune System for Defending LLM Agents against Prompt Injection

    Aug 4, 2026Shihao Weng, Yang Feng, Xiaofei Xie +1Multi-Llm AgentsPrompt Engineering

    Nanjing University · Singapore Management University · Nanyang Technological University

  11. TransNRank: Towards Accurate Neoantigen Ranking with Transformer

    Aug 3, 2026Zhiyin An, Yuenan Hou, Shumeng Duan +3Antimicrobial PeptideAntibody

  12. AMPBench-MT: A Homology-Controlled Benchmark for Antimicrobial Peptide Potency, Spectrum, and Safety Prediction

    Jul 28, 2026Ziheng Zhou, Huiyu Luo, Xiaohu Zhu +4Antimicrobial Peptide

    Shanghai Ocean University, Shanghai, China · Tongji University, Shanghai, China · Center for Safe AGI, Shanghai, China +1

  13. Continuous surrogates versus threshold Boolean networks for modeling Arabidopsis ISR gene regulation

    Jul 25, 2026Gonzalo A. RuzRegulatory NetworksSurrogate Models

    Facultad de Ingenier´ıa y Ciencias, Universidad Adolfo Ib´a˜nez · Millennium Nucleus for Social Data Science (SODAS) · Millennium Nucleus in Data Science for Plant Resilience (PhytoLearning) +1

  14. DynImmune-BERT: Dynamic Immune Repertoire Modeling with Neural ODE Driven Continuous Transformers

    Jul 19, 2026Rong Fu, Yongtai Liu, Xiaowen Ma +5Antimicrobial PeptideLongitudinal

    Independent Researcher

  15. Agent-Native Immune System: Architecture, Taxonomy, and Engineering

    Jun 26, 2026Bo Shen, Lifeng Chang, Tianyuan Wei +7LLM Defense MechanismsAntimicrobial Peptide

    Novo Ordo for AI

  16. Residue-Level Attributions in Protein Language Models Do Not Recover Allergen Epitopes

    Jun 20, 2026Jianzhou Yao, Anxiong Song, Katja Baerenfaller +1Epitope PredictionAntimicrobial Peptide

    Swiss Institute of Allergy and Asthma Research, Davos, Switzerland · ETH Zurich, Zurich, Switzerland · Swiss Institute of Bioinformatics, Lausanne, Switzerland

  17. Agentic Discovery of Non-Canonical Antimicrobial Peptides with AMPGAN v3

    Jun 15, 2026Jay Jung, Xiaohan Zhang, Shenghan Song +8Antimicrobial PeptideAgentic Discovery

    Department of Computer Science, University of Vermont, Burlington, VT, USA · Borch Department of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, IN, USA · Department of Comparative Pathobiology, Purdue University, West Lafayette, IN, USA +3

  18. AURA: Active-Response Attribution under Treatment Ambiguity in Bacterial Cytological Profiling

    Jun 15, 2026Kartik Jhawar, Mrunmayee Deshpande, Wilfried Moreira +2Bacterial Colony CountingAntimicrobial Peptide

    Institute for Digital Molecular Analytics and Science, Nanyang Technological University, Singapore 636921 · School of Electrical and Electronic Engineering, Nanyang Technological University, Singapore 639798 · Institute for Functional Intelligent Materials, National University of Singapore, Singapore 117544

  19. AAbAAC: An Annotated Corpus for Autoimmunity Information Extraction

    Jun 11, 2026Fabien Maury, Solène Grosdidier, Maud de Dieuleveult +1Information ExtractionAntimicrobial Peptide

    Imagine - U1163, HeKA | U1346 · Inserm, Université Paris Cité, U1163 Institut Imagine, Paris, France · Imagine - U1163 +3

  20. Frequency-Domain Latent Attention Gating for Cross-Domain Token Aggregation

    Jun 6, 2026Kewei Li, Rongying Zhang, Xueli Wang +5GatingSpectral

    College of Computer Science and Technology, Jilin University, Changchun, 130012, China. · Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education, Jilin University, Changchun, 130012, China. · Institute for Quantitative and Computational Biology, University of California, Los Angeles, 90024, United States of America. +2

  21. An Evolutionary Approach for Designing Stable and Highly Expressible Low-Immunogenicity Therapeutic mRNA Sequences

    May 27, 2026Dhawa Sang Dong, Mausam Gurung, Suraj KandelMessenger RnaAntimicrobial Peptide

    Department of Artificial Intelligence School of Engineering, Kathmandu University Dhulikhel, Nepal · Department of Electronics and Computer Engineering Kathmandu Engineering College, Trivubhan University Kathmandu, Nepal · Hetauda School of Management and Social Science Trivubhan University Hetauda, Nepal

  22. A Multi-Dimensional Clustering Approach for Identifying Inborn Errors of Immunity

    May 16, 2026Nishad Kulkarni, Alexandra K. Martinson, Nicholas L. Rider +2Rare DiseaseElectronic Health Records

    Sheikh Zayed Institute for Pediatric Surgical Innovation, Children’s National Hospital, Washington, DC 20010 · Childrens National Hospital, Washington, DC · School of Medicine and Health Sciences, George Washington University, Washington, DC 20052 +2

  23. Agentic AI platforms for autonomous training and rule induction of human-human and virus-human protein-protein interactions

    Apr 27, 2026Hung N. Do, Jessica Z. Kubicek-Sutherland, Oscar A. Negrete +1Antimicrobial PeptideInduction

    Theoretical Biology and Biophysics Group, Theoretical Division; 2Physical Chemistry and Applied Spectroscopy Group, Chemistry Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA 87545 · Physical Chemistry and Applied Spectroscopy Group, Chemistry Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA 87545 · Systems Biology Department, Sandia National Laboratories, Livermore, California, USA 94550

  24. Transcriptomic Models for Immunotherapy Response Prediction Show Limited Cross-cohort Generalisability

    Apr 7, 2026Yuheng Liang, Lucy Chhuo, Ahmadreza Argha +8TranscriptomicsBiomarker

    UNSW BioMedical Machine Learning Lab (BML), School of Biomedical Engineering, UNSW Sydney, Sydney, NSW, 2052, Australia · Garvan Institute of Meidical Research, Sydney, NSW, 2000, Australia · School of Biomedical Engineering, UNSW, Sydney, NSW, 2052, Australia +7

  25. Freeze, Diffuse, Decode: Task-Aware Adaptation of Transformer Embeddings for Antimicrobial Peptide Design

    Nov 28, 2025Pankhil Gawade, Adam Izdebski, Myriam Lizotte +4Generative Pretrained TransformersBehavioral Embeddings

    Institute of AI for Health, Helmholtz Munich · School of Computation, Information and Technology, Technical University of Munich · Mila - Quebec AI institute; Univ. de Montreal +3

  26. OmegAMP: Targeted AMP Discovery via Biologically Informed Generation

    Apr 24, 2025Diogo Soares, Leon Hetzel, Paulina Szymczak +6Antimicrobial PeptideDiscovery

    Institute of AI for Health, Helmholtz Munich · School of Computation, Information and Technology, Technical University of Munich · Institute of Computational Biology, Helmholtz Munich +8