Attention Mechanisms
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This paper studies the role of sinks and diagonal patterns as attention switch and anti-oversmoothing mechanisms. We analyze geometric conditions under which sinks can be represented, showing a necessary alignment between the embedding of the sink and all other embeddings. Next, we refine the current understanding of the role of sinks in oversmoothing prevention: we specify the conditions under which dense attention provably smooths more than sparse attention, and empirically verify that such conditions are often satisfied in practice. We further prove an equivalence between sinks and hard attention switch, in which the output of the attention is identically 0. Finally, we relax the hard attention switch by allowing token self-communication: we provide a quantitative comparison of the costs of representing sinks vs.\ diagonal patterns, showing why sinks are favored in pretrained transformers. The introduction and analysis of diagonal patterns and the generalization of the attention switch close the gap between what oversmoothing prevention requires and what sinks provide, while also establishing when and why attention layers act like MLPs if token communication is not necessary.
GazeVLM: Active Vision via Internal Attention Control for Multimodal Reasoning
Human visual reasoning is governed by active vision, a process where meta-cognitive control drives top-down goal-directed attention, dynamically routing foveal focus toward task-relevant details while maintaining peripheral awareness of the global scene. In contrast, modern Vision-Language Models (VLMs) process visual information passively, relying on the static accumulation of massive token contexts that dilute the visual evidence as the reasoning chain grows. Here we propose GazeVLM, a VLM that learns to exert this oversight over its attention resources by generating gaze actions in its reasoning chain, in the form of <LOOK> tags specifying the coordinates of the region to inspect. During training, each <LOOK> block triggers a continuous suppression bias on the attention logits that dampens features outside the regions gazed at so far, and that lifts at the end of the block, restoring the global view. The model is trained with this bias as a teaching signal, first by Supervised Fine-Tuning on curated gaze-reasoning traces, then through Group Relative Policy Optimization (GRPO) with rewards for correct answers and valid grounding. At deployment, the external suppression is removed and the model, running its unmodified forward pass, steers its own attention to the regions indicated by the <LOOK> blocks, retaining most of the effect of the bias and emulating top-down control of spatial attention. This model thus transitions between global spatial awareness and localized focal reasoning without relying on external agentic tools like cropping, and without adding visual tokens from re-encoded patches. Applied to 4B-parameter backbones, GazeVLM demonstrates strong high-resolution multimodal reasoning on HRBench-4k and HRBench-8k, surpassing its base models by about 4 points, and outperforming agentic multimodal pipelines built around thinking with images by 5 to 12 points.
Revisiting Transformer Layer Parameterization Through Causal Energy Minimization
Transformer blocks typically combine multi-head attention (MHA) for token mixing with gated MLPs for token-wise feature transformation, yet many choices in their parameterization remain largely empirical. We introduce Causal Energy Minimization (CEM), a framework that recasts Transformer layers as optimization steps on conditional energy functions while explicitly accounting for layer parameterization. Extending prior energy-based interpretations of attention, CEM shows that weight-tied MHA can be derived as a gradient update on an interaction energy, and that a gated MLP with shared up/down projections can be viewed through an element-wise energy. This perspective identifies a design space for Transformer layers that includes within-layer weight sharing, diagonal-plus-low-rank interactions, lightweight preconditioners, and recursive updates. We evaluate CEM-derived layers in language-modeling experiments at the moderate hundred-million-parameter scale. Despite their constrained parameterizations, these layers train stably and can match corresponding Transformer baselines. Overall, our results suggest that CEM provides a useful lens for understanding Transformer layer parameterization, connecting Transformer architectures to energy-based models and motivating further exploration of energy-guided layer designs.
Attention Transfer Is Not Universally Effective for Vision Transformers
A recent work shows that Attention Transfer, which transfers only the attention patterns from a pre-trained teacher Vision Transformer (ViT) to a randomly initialized standard student ViT, is sufficient to recover the full benefit of the teacher's pre-trained weights. We revisit this finding on a comprehensive benchmark of 20 teachers from 11 well-known ViT families and reveal that Attention Transfer is not universally effective. While 7 families transfer successfully, 4 consistently fail, falling up to 5.1% below the from-scratch no-transfer baseline. Further results demonstrate that this failure is family-consistent across model sizes, and persists under extended training durations, different transfer datasets, and out-of-distribution evaluations. Controlled analyses then consistently localize the problem to the attention-routing channel, indicating that the key issue is not whether the student can match the teacher's attention patterns, but whether the matched patterns remain functional for the student. Crucially, we identify architectural mismatch between the pre-trained teacher and the standard student as the primary mechanism. By adding only the teacher's native architectural components to the student in a randomly initialized state, we completely reverse the failure for all 4 families. Notably, these components alone do not improve from-scratch training, confirming that they specifically unlock the usability of the teacher's attention. We further systematically show that this failure is not explained by the inadequate choice of transfer loss or by differences in pre-training recipes. Our findings refine the prevailing understanding of attention in ViT representations: attention is sufficient \textit{only} when the student architecture matches the teacher.
The Structural Origin of Attention Sink: Variance Discrepancy, Super Neurons, and Dimension Disparity
Despite the prevalence of the attention sink phenomenon in Large Language Models (LLMs), where initial tokens disproportionately monopolize attention scores, its structural origins remain elusive. This work provides a \textit{mechanistic explanation} for this phenomenon. First, we trace its root to the value aggregation process inherent in self-attention, which induces a systematic variance discrepancy. We further demonstrate that this discrepancy is drastically amplified by the activation of super neurons within Feed-Forward Network (FFN) layers. Specifically, the channel-sparse down-projections trigger a dimension disparity of the first-token representation, necessitating the formation of attention sinks as a structural anchor. Then, we validate this causal chain through two controlled interventions: (i) isolating the aggregation effect via attention mask modifications and (ii) amplifying the variance of targeted token representations. Both interventions can replicate attention sinks at arbitrary positions. Our mechanistic understanding offers a foundation for the systematic control of sink formation. Finally, as a proof of concept, we propose \textit{head-wise RMSNorm}, an architectural modification that stabilizes value aggregation outputs during pre-training. Our experiments demonstrate that restoring statistical parity across positions significantly accelerates convergence.
Long Context Pre-Training with Lighthouse Attention
Training causal transformers at extreme sequence lengths is bottlenecked by the quadratic time and memory of scaled dot-product attention (SDPA). In this work, we propose Lighthouse Attention, a training-only symmetrical selection-based hierarchical attention algorithm that wraps around ordinary SDPA and can be easily removed towards the end of the training. Our hierarchical selection is also gradient-free, which exempts us from dealing with a complicated and potentially inefficient backward pass kernel. Our contribution is three-fold: (i) A subquadratic hierarchical pre- and post-processing step that does adaptive compression and decompression of the sequence. (ii) A symmetrical compression strategy that pools queries, keys and values at the same time, while preserving left-to-right causality, which greatly improves parallelism. (iii) A two stage training approach which we pre-train for the majority of the time with Lighthouse Attention and recover a full attention model at the end with a short training. We run preliminary small scale LLM pre-training experiments that show the effectiveness of our method compared to full attention training with all other settings matched, where we achieve a faster total training time and lower final loss after the recovery phase. Full code is available at: https://github.com/ighoshsubho/lighthouse-attention
Look Beyond Saliency: Low-Attention Guided Dual Encoding for Video Semantic Search
Video semantic search in densely crowded scenes remains a challenging task due to visual encoders tendency to prioritize salient foreground regions while neglecting contextually important, background areas. We propose an Inverse Attention Embedding mechanism that explicitly captures and highlights these overlooked regions. By combining inverse attention embeddings with traditional visual embeddings, our method significantly enhances semantic retrieval performance without additional training. Initial experiments and ablation studies demonstrate promising improvements over existing approaches in recall for video semantic search in crowded environments.
Neuromorphic visual attention for Sign-language recognition on SpiNNaker
Sign-language recognition has achieved substantial gains in classification accuracy in recent years; however, the latency and power requirements of most existing methods limit their suitability for real-time deployment. Neuromorphic sensing and processing offer an alternative paradigm based on sparse, event-driven computation that supports low-latency and energy-efficient perception. In this work, we introduce an end-to-end neuromorphic architecture for American Sign Language (ASL) fingerspelling recognition that integrates a spiking visual attention mechanism for online region-of-interest extraction with a compact spiking neural network deployed on the SpiNNaker neuromorphic platform. We benchmark the proposed system against two datasets: a synthetically generated event-based version of the Sign Language MNIST dataset and a natively recorded ASL-DVS dataset, whilst providing a comprehensive overview of Sign-language recognition and related work. This work yields competitive performance in simulation (92.27%) and comparable performance on neuromorphic hardware deployment (83.1%), while achieving the most energy-efficient architecture (0.565 mW) and low latency (3 ms) across all benchmarked approaches. Despite its compact design, the system demonstrates the suitability of task-dependent visual attention applications for edge deployment.
Retrieval from Within: An Intrinsic Capability of Attention-Based Models
Retrieval-augmented generation (RAG) typically treats retrieval and generation as separate systems. We ask whether an attention-based encoder-decoder can instead retrieve directly from its own internal representations. We introduce INTRA (INTrinsic Retrieval via Attention), a framework where decoder attention queries score pre-encoded evidence chunks that are then directly reused as context for generation. By construction, INTRA unifies retrieval and generation, eliminating the retriever-generator mismatch typical of RAG pipelines. This design also amortizes context encoding by reusing precomputed encoder states across queries. On question-answering benchmarks, INTRA outperforms strong engineered retrieval pipelines on both evidence recall and end-to-end answer quality. Our results demonstrate that attention-based models already possess a retrieval mechanism that can be elicited, rather than added as an external module.
Large Vision-Language Models Get Lost in Attention
Despite the rapid evolution of training paradigms, the decoder backbone of large vision--language models (LVLMs) remains fundamentally rooted in the residual-connection Transformer architecture. Therefore, deciphering the distinct roles of internal modules is critical for understanding model mechanics and guiding architectural optimization. While prior statistical approaches have provided valuable attribution-based insights, they often lack a unified theoretical basis. To bridge this gap, we propose a unified framework grounded in information theory and geometry to quantify the geometric and entropic nature of residual updates. Applying this unified framework reveals a fundamental functional decoupling: Attention acts as a subspace-preserving operator focused on reconfiguration, whereas FFNs serve as subspace-expanding operators driving semantic innovation. Strikingly, further experiments demonstrate that replacing learned attention weights with predefined values (e.g., Gaussian noise) yields comparable or even superior performance across a majority of datasets relative to vanilla models. These results expose severe misallocation and redundancy in current mechanisms, suggesting that state-of-the-art LVLMs effectively ``get lost in attention'' rather than efficiently leveraging visual context.
Ensuring Reliability in Programming Knowledge Tracing: A Re-evaluation of Attention-augmented Models and Experimental Protocols
Programming Knowledge Tracing (PKT) has recently advanced through hybrid approaches that integrate attention-based feature modeling for code representation with RNN-based sequential prediction. While these models report strong empirical performance, their reliability can be sensitive to subtle implementation and experimental design choices. This study revisits representative PKT models and shows that reported gains can be substantially influenced by model configuration and sequence construction practices. We identify issues in attention dimension settings that affect performance estimates, and demonstrate that improper ordering of student attempts, such as ignoring ServerTimestamp, can violate temporal causality and lead to overly optimistic results. To ensure consistent evaluation, hyperparameters are selected via grid search guided by a single designated fold and then fixed uniformly across all folds during cross-validation. We further analyze the role of assignment-wise characteristics and systematically explore the impact of maximum sequence length. Using this protocol, we re-evaluate PKT models on the CodeWorkout dataset. Our results show that, under controlled and consistent settings, the performance gap between attention-enhanced models and standard DKT is significantly reduced, and increased architectural complexity does not consistently translate into superior performance. Beyond individual model comparisons, this work provides practical guidance for reliable and comparable evaluation in programming knowledge tracing.
Average Attention Transformers and Arithmetic Circuits
We analyse the computational power of transformer encoders as sequence-to-sequence functions on vectors. We show that average hard attention can be used to simulate arithmetic circuits if they are given as an input to an encoder. The circuit families that can be simulated this way have constant depth while using unbounded addition, binary multiplication and sign gates. The transformers we use have arithmetic circuits instead of feed-forward networks. With typical average attention the functions they compute are also computed by the same class of circuit families. Our results hold for transformers over the reals, rationals and any ring in between the two.
Angle-I2P: Angle-Consistent-Aware Hierarchical Attention for Cross-Modality Outlier Rejection
Image-to-point-cloud registration (I2P) is a fundamental task in robotic applications such as manipulation,grasping, and localization. Existing deep learning-based I2P methods seek to align image and point cloud features in a learned representation space to establish correspondences, and have achieved promising results. However, when the inlier ratio of the initial matching pairs is low, conventional Perspective-n-Points (PnP) methods may struggle to achieve accurate results. To address this limitation, we propose Angle-I2P, an outlier rejection network that leverages angle-consistent geometric constraints and hierarchical attention. First, we design a scale-invariant, crossmodality geometric constraint based on angular consistency. This explicit geometric constraint guides the model in distinguishing inliers from outliers. Furthermore, we propose a global-tolocal hierarchical attention mechanism that effectively filters out geometrically inconsistent matches under rigid transformation, thereby improving the Inlier Ratio (IR) and Registration Recall (RR). Experimental results demonstrate that our method achieves state-of-the-art performance on the 7Scenes, RGBD Scenes V2, and a self-collected dataset, with consistent improvements across all benchmarks.
FLUID: Continuous-Time Hyperconnected Sparse Transformer for Sink-Free Learning
Continuous-time (CT) Transformers improve irregular and long-range modeling over CT-RNNs by exploiting inputs or outputs embeddings with continuous dynamics. However, the core scaled-dot-product-attention (SDPA) mechanism remains inherently discrete. We propose FLUID (Flexible Unified Information Dynamics), a CT Transformer that incorporates continuous dynamics directly into the attention computation by replacing it with Liquid Attention Network (LAN). LAN reinterprets attention logits as continuous dynamical system and reformulates them as the solution to a linear ODE modulated by input-dependent nonlinear recurrent gates. Theoretically, we establish stability guarantees for LAN dynamics and show that it serves as an interpolating middle ground between SDPA and CT-RNNs, recovering each as special case under well-defined parameterization of its gating functions. LAN also introduces an explicit attention-sink gate to eliminate disproportionate attention mass on uninformative nodes. FLUID replaces standard residual connections with input-dependent Liquid Hyper-Connections to adaptively regulate interlayer information flow. Empirically, we evaluate FLUID on a broad set of learning tasks, including (i) irregular time-series, (ii) long-range modeling, (iii) lane-keeping control of autonomous vehicles, and (iv) learning physical dynamics under a scarce data regime. Across all the tasks, FLUID consistently matches or outperforms CT baselines, achieving improvements of up to 47% in certain scenarios and enhancing generalization under distributional shifts. Additionally, FLUID demonstrates superior noise robustness and a self-correcting inductive bias in autonomous vehicle control. We also provide a detailed analysis of key hyperparameters to guide tuning and show that FLUID occupies an intermediate position among competing approaches in terms of runtime and memory efficiency.
Where Reliability Lives in Vision-Language Models: A Mechanistic Study of Attention, Hidden States, and Causal Circuits
A pervasive intuition holds that vision-language models (VLMs) are most trustworthy when their attention maps look sharp: concentrated attention on the queried region should imply a confident, calibrated answer. We test this Attention-Confidence Assumption directly. We instrument three open-weight VLM families (LLaVA-1.5, PaliGemma, Qwen2-VL; 3-7B parameters) with a unified mechanistic pipeline -- the VLM Reliability Probe (VRP) -- that compares attention structure, generation dynamics, and hidden-state geometry against a single correctness label. Three results emerge. (i) Attention structure is a near-zero predictor of correctness (R_pb(C_k,y)=0.001, 95% CI [-0.034,0.036]; R_pb(H_s,y)=-0.012, [-0.047,0.024] on a pooled n=3,090 split), even though attention remains causally necessary for feature extraction (top-30% patch masking drops accuracy by 8.2-11.3 pp, p<0.001). (ii) Reliability becomes legible later in the computation: a single hidden-state linear probe reaches AUROC>0.95 on POPE for two of three families, and self-consistency at K=10 is the strongest behavioral predictor we measure at 10x inference cost (R_pb=0.43). (iii) Causal neuron-level ablations expose a sharp architectural split with direct monitor-design implications: late-fusion LLaVA concentrates reliability in a fragile late bottleneck (-8.3 pp object-identification accuracy after top-5 probe-neuron ablation), whereas early-fusion PaliGemma and Qwen2-VL distribute it widely and absorb destruction of ~50% of their peak-layer hidden dimension with <=1 pp degradation. The takeaway is narrow but consequential: in 3-7B VLMs, reliability is read more reliably off hidden-state geometry, layer-wise margin formation, and sparse late-layer circuits than off attention-map sharpness.
Gradient Flow Structure and Quantitative Dynamics of Multi-Head Self-Attention
Transformer self-attention can be interpreted as a gradient flow on the unit sphere, in which tokens evolve under softmax interaction potentials and tend to form clusters. While prior work has established clustering behavior for single-head attention, the multi-head setting remains less understood due to geometric interference between heads, which invalidates standard monotonicity arguments. In this work, we develop a theoretical framework for multi-head self-attention dynamics and resolve several open questions. We show that, under suitable conditions on the score matrices, a natural multi-head energy functional is non-decreasing along both flat and spherical dynamics. We identify the key obstruction to per-head monotonicity as radial shadow terms, which are projections of each head's output onto token directions, persisting even under orthogonality assumptions. We introduce a sufficient condition ensuring monotonicity and establish robustness to approximate orthogonality. In a simplified scalar-head regime with equiangular token configurations, we derive a closed-form expression for the critical inverse temperature governing clustering behavior, and show that heterogeneous heads exhibit super-additive clustering rates. In this regime, we also prove a separation in clustering time between ReLU and softmax attention in the linearized dynamics. Finally, we establish an entropy production identity and show that attention entropy increases monotonically toward equilibrium as clustering progresses. Our results provide a unified perspective on the dynamics of multi-head attention and clarify the mechanisms underlying clustering and stability in transformer models.
How Language Models Process Negation
We study how Large Language Models (LLMs) process negation mechanistically. First, we establish that even though open-weight models often provide wrong answers to questions involving negation, they do possess internal components that process negation correctly. Their poor accuracy is due to late-layer attention behavior that promotes simple shortcuts; ablating those attention modules greatly improves accuracy on negation-related questions. Second, we uncover how models process negation. We consider two hypotheses: models could use attention heads that attend to the phrase being negated and suppress related concepts, or they could directly construct a representation of the entire negative phrase (e.g., representing "not gas" as a vector that promotes liquids and solids). We apply a range of observational and causal interpretability techniques on Mistral-7B and Llama-3.1-8B to show that models implement both mechanisms, with the "constructive" mechanism being more prominent. Combined, our work deepens the understanding of LLMs' internals, highlighting construction-dominant computations and the coexistence of competing mechanisms within LLMs.
When Attention Collapses: Residual Evidence Modeling for Compositional Inference
Compositional inference - the decomposition of observations into an unknown number of latent components - is central to perception and scientific data analysis. Attention-based models perform well when components are approximately separable, as in object-centric vision. Under additive superposition, however - where multiple components contribute to every observation - we identify a structural failure mode we term slot collapse: multiple slots converge to the same dominant component while weaker ones remain unrepresented. We trace this to a general limitation: attention is memoryless with respect to explained evidence. All slots repeatedly operate on the same input without accounting for what has already been explained, so gradients are dominated by the strongest component, inducing shared fixed points across slots. As a result, attention fails to enforce non-redundant allocation under additive superposition. We address this by introducing residual evidence modeling, instantiated via evidence depletion - a minimal modification combining multiplicative depletion with an attention bias. Controlled ablations show that parallel attention, sequential processing alone, and loss-based regularization fail to resolve collapse; evidence depletion, which adds residual state to sequential attention, consistently succeeds. Across synthetic benchmarks and real-world audio mixtures (FUSS), evidence depletion reduces slot collapse by up to an order of magnitude, generalizing beyond synthetic settings. On gravitational-wave source inference for the ESA/NASA LISA mission, under identical architectures, data, and losses, standard attention fails while evidence depletion prevents collapse and enables multi-source posterior estimation. These results show that under additive superposition, residual evidence tracking is the operative ingredient for preventing collapse and enabling compositional inference.
Projection-Free Transformers via Gaussian Kernel Attention
Self-attention in Transformers is typically implemented as , where , , and are learned linear projections of the input . We ask whether these learned projections are necessary, or whether they can be replaced by a simpler similarity-based diffusion operator. We introduce \textbf{Gaussian Kernel Attention} (GKA), a drop-in replacement for dot-product attention that computes token affinities directly using a Gaussian radial basis function (RBF) kernel applied to per-head token features. Each head learns only a bandwidth parameter , while a single output projection preserves compatibility with the standard Transformer interface. GKA can be interpreted as normalized kernel regression over tokens, linking modern Transformer architectures to classical non-local filtering and kernel smoothing methods. We evaluate GKA in both vision and language modeling settings. For autoregressive language modeling within the \texttt{nanochat} framework, we implement causal masking and sliding-window constraints by masking and renormalizing the Gaussian kernel. At depth 20, a GKA model with the parameters and the total training FLOPs of a standard attention baseline trains stably, exhibits a near-zero train-validation gap, and demonstrates competitive behavior on standard benchmarks, albeit with higher bits-per-byte (BPB) at this compute scale. Overall, GKA provides a minimal, interpretable attention mechanism with an explicit locality scale, offering a dimension in the accuracy-efficiency trade-off for Transformer design.
Characterizing the Expressivity of Local Attention in Transformers
The transformer is the most popular neural architecture for language modeling. The cornerstone of the transformer is its global attention mechanism, which lets the model aggregate information from all preceding tokens before generating the next token. One common variant of attention is called local attention, which restricts each token to aggregating information from a bounded window of predecessors, reducing the quadratic cost of global attention to linear. Although this restriction is usually motivated by efficiency, it has also been found to improve model quality, a phenomenon that has so far lacked a satisfactory explanation. We provide a formal account of this phenomenon in terms of recognizer expressivity. It has been shown that fixed-precision transformers with global attention correspond to a fragment of linear temporal logic containing a single past operator. We additionally prove that adding local attention introduces a second temporal operator, strictly enlarging the class of recognizable regular languages. Moreover, global and local attention are expressively complementary: neither subsumes the other, and combining them yields the richest fragment. Experiments on formal language recognition and natural language modeling corroborate the theory, showing that hybrid global--local transformers outperform their global-only counterparts.
How Language Models Process Out-of-Distribution Inputs: A Two-Pathway Framework
Recent white-box OOD detection methods for LLMs -- including CED, RAUQ, and WildGuard confidence scores -- appear effective, but we show they are structurally confounded by sequence length (|r| >= 0.61) and collapse to near-chance under length-matched evaluation. Even raw attention entropy (mean H(alpha) across heads and layers), a natural baseline we include for completeness, shows the same confound. The confound stems from attention's Theta(log T) dependence on input length. To identify genuine OOD signals after deconfounding, we propose a two-pathway framework: embeddings capture what text is about (effective for topic shifts), while the processing trajectory -- hidden-state evolution across layers -- captures how the model processes input. The relative power of each pathway varies along a vocabulary-transparency spectrum: embedding methods excel on vocabulary-distinctive OOD, while trajectory features detect covert-intent inputs that share vocabulary with normal text (0.721 avg AUROC; Jailbreak: 0.850). Three evidence lines support this framework: (1) a crossover between k-NN and trajectory scoring across 6 tasks, where each pathway wins on different OOD types; (2) a per-layer analysis showing that layer-0 k-NN signal is almost entirely a length artifact (Jailbreak: 0.759 raw -> 0.389 matched) -- processing constructs genuine OOD signal from near-chance embeddings; and (3) circuit attribution showing adversarial tasks engage attention circuits more than semantic tasks (p = 0.022; Jailbreak patching p < 0.001), with partial cross-model replication. Code release upon publication.
Attention Is Where You Attack
Safety-aligned large language models rely on RLHF and instruction tuning to refuse harmful requests, yet the internal mechanisms implementing safety behavior remain poorly understood. We introduce the Attention Redistribution Attack (ARA), a white-box adversarial attack that identifies safety-critical attention heads and crafts nonsemantic adversarial tokens that redirect attention away from safety-relevant positions. Unlike prior jailbreak methods operating at the semantic or output-logit level, ARA targets the geometry of softmax attention on the probability simplex using Gumbel-softmax optimization over targeted heads. Across LLaMA-3-8B-Instruct, Mistral-7B-Instruct-v0.1, and Gemma-2-9B-it, ARA bypasses safety alignment with as few as 5 tokens and 500 optimization steps, achieving 36% ASR on Mistral-7B and 30% on LLaMA-3 against 200 HarmBench prompts, while Gemma-2 remains at 1%. Our principal mechanistic finding is a dissociation between ablation and redistribution: zeroing out the top-ranked safety heads produces at most 1 flip among 39 to 50 baseline refusals, while ARA targeting the corresponding safety-heavy layers flips 72/200 prompts on Mistral-7B and 60/200 on LLaMA-3. This suggests that safety is not localized in these heads as removable components, but emerges from the attention routing they perform. Removing a head allows compensation through the residual stream, while redirecting its attention propagates a corrupted signal downstream.
Better Models, Faster Training: Sigmoid Attention for single-cell Foundation Models
Training stable biological foundation models requires rethinking attention mechanisms: we find that using sigmoid attention as a drop in replacement for softmax attention a) produces better learned representations: on six diverse single-cell datasets, sigmoid achieves 25% higher cell-type separation, better cell-type cohesion metrics, and lower validation loss, b) faster training, models with sigmoid attention train up to 10% faster than their softmax counterparts, and c) more stable training by eliminating inherent sources of instability in softmax attention. We establish that sigmoid attention has globally bounded derivatives () as opposed to softmax, and a diagonal Jacobian structure in contrast with softmax's dense coupling, which together help alleviate training instabilities. In stress tests on 160M-parameter bidirectional attention models trained without gradient clipping on 8K-token sequences, softmax diverges catastrophically, with gradients exploding by four orders of magnitude, while sigmoid remains stable. Finally, we implement and open-source TritonSigmoid, an efficient GPU kernel that achieves 515 TFLOPS on H100 GPUs, outperforming both FlashAttention-2 and FlashSigmoid, with native padding support, which is essential for biological sequences. Our results establish sigmoid attention as both theoretically grounded and empirically superior for biological foundation models. Code is available at https://github.com/MSDLLCpapers/triton-sigmoid
From Architecture to Output: Structural Origins of Hallucination in Large Language Models and the Amplifying Role of Data
Large language models hallucinate--producing fluent, confident, factually wrong outputs--with a consistency that persists across generations and scales. Existing taxonomies classify hallucination by output type, distinguishing intrinsic from extrinsic failures and faithfulness from factuality divergence. These frameworks are descriptively rigorous but do not identify which internal mechanism produced a given instance. This paper analyses hallucination as a structural consequence of three architectural decisions that together form a compound failure system. Self-attention's co-occurrence learning substitutes statistical proximity for semantic meaning and produces entity confusion, fact misattribution, and semantic drift. The maximum likelihood estimation training objective optimises next-token probability without factual constraint, rewarding statistically plausible outputs regardless of their truth value. Autoregressive decoding's permanent left-to-right commitment under exposure bias ensures that a single wrong token cascades forward through the entire output sequence without revision. Dataset pathologies--long-tail deficiencies, training bias, and synthetic pollution--amplify these vulnerabilities but do not independently cause them. We make three contributions. First, we map each mechanism to a specific output category in the Alansari and Luqman taxonomy, locating intrinsic hallucination in self-attention, extrinsic hallucination in MLE, and logical inconsistency in autoregressive decoding. Second, we show that each commonly cited dataset pathology exploits one of these mechanisms rather than originating hallucination independently. Third, we identify the diagnostic limitation of output-type-only classification and contrast it with inference-layer mitigation approaches.
GateMOT: Q-Gated Attention for Dense Object Tracking
While large models demonstrate the strong representational power of vanilla attention, this core mechanism cannot be directly applied to Dense Object Tracking: its quadratic all-to-all interactions are computationally prohibitive for dense motion estimation on high-resolution features. This mismatch prevents Dense Object Tracking from fully leveraging attention-based modeling in crowded and occlusion-heavy scenes. To address this challenge, we introduce GateMOT, an online tracking framework centered on Q-Gated Attention (Q-Attention), an efficient and spatially aware attention variant. Our key idea is to repurpose the Query from a similarity-conditioning term into a learnable gating unit. This Gating-Query (Gating-Q) produces a probabilistic gate that modulates Key features in an element-wise manner, enabling explicit relevance selection instead of costly global aggregation. Built on this mechanism, parallel Q-Attention heads transform one shared feature map into task-specific yet consistent representations for detection, motion, and re-identification, yielding a tightly coupled multi-task decoder with linear-complexity gating operations. GateMOT achieves state-of-the-art HOTA of 48.4, MOTA of 67.8, and IDF1 of 64.5 on BEE24, and demonstrates strong performance on additional Dense Object Tracking benchmarks. These results show that Q-Attention is a simple, effective, and transferable building block for attention-based tracking in dense tracking scenarios.
Comparative Analysis of AutoML and BiLSTM Models for Cyberbullying Detection on Indonesian Instagram Comments
This study compares machine learning and deep learning approaches for cyberbullying detection in Indonesian-language Instagram comments. Using a balanced dataset of 650 comments labeled as Bullying and Non-Bullying, the study evaluates Naive Bayes, Logistic Regression, and Support Vector Machine with TF-IDF features, as well as BiLSTM and BiLSTM with Bahdanau Attention. A preprocessing pipeline tailored to informal Indonesian text is applied, including slang normalization, stopword removal, and stemming. The results show that Logistic Regression performs best among the machine learning models, while BiLSTM with Attention achieves the strongest overall deep learning performance. The findings highlight the value of domain-specific preprocessing and show that although deep learning captures contextual patterns more effectively, machine learning remains a competitive option for resource-constrained deployments.
AMMA: A Multi-Chiplet Memory-Centric Architecture for Low-Latency 1M Context Attention Serving
All current LLM serving systems place the GPU at the center, from production-level attention-FFN disaggregation to NVIDIA's Rubin GPU-LPU heterogeneous platform. Even academic PIM/PNM proposals still treat the GPU as the central hub for cross-device communication. Yet the GPU's compute-rich architecture is fundamentally mismatched with the memory-bound nature of decode-phase attention, inflating serving latency while wasting power and die area on idle compute units. The problem is compounded as reasoning and agentic workloads push context lengths toward one million tokens, making attention latency the primary user-facing bottleneck. To address these inefficiencies, we present AMMA, a multi-chiplet, memory-centric architecture for low-latency long-context attention. AMMA replaces GPU compute dies with HBM-PNM cubes, roughly doubling the available memory bandwidth to better serve memory-bound attention workloads. To translate this bandwidth into proportional performance gains, we introduce (i) a logic-die microarchitecture that fully exploits per-cube internal bandwidth for decode attention under a minimal power and area budget, (ii) a two-level hybrid parallelism scheme, and (iii) a reordered collective flow that reduces intra-chip die-to-die communication overhead. We further conduct a design-space exploration over per-cube compute power and intra-chip D2D link bandwidth, providing actionable guidance for hardware designers. Evaluations show that AMMA achieves 15.5X lower attention latency and 6.9X lower energy consumption compared with the NVIDIA H100.
Block-Wise Differentiable Sinkhorn Attention: Tail-Refinement Gradients with a Gap-Aware Dustbin Bridge
We study long-context balanced entropic optimal transport (OT) attention on TPU hardware through a stopped-base, fixed-depth tail-refinement surrogate. After a stopped -step Sinkhorn solve, we unroll a short refinement tail and differentiate that surrogate exactly. For the reported TPU path, the backward pass contains four staircase plan factors. We prove an exact one-reference-tile schedule: the score cotangent is a single reference plan tile times an explicit modifier field built from vector cotangents and dual differences. This yields block-wise cost , input storage, and additional HBM usage for fixed head dimension and band width on the balanced fixed-support path. We also formalize the current \texttt{dustbin_block} path as the same unit-target surrogate on an augmented support, so the adjoint schedule lifts to the single-active-dustbin path used in our TPU runs; this bridge is algebraic and does not claim a general KL-unbalanced or arbitrary-capacity gap model. We provide a local surrogate-bias bound, an a posteriori bias certificate, and a projective contraction certificate for strictly positive active blocks. On synthetic masked problems, the optimized kernel matches exact autodiff of the same centered surrogate to within --. On TPU v6e-8, a four-configuration Pfam screen completes end-to-end, and a promoted balanced run sustains roughly examples per second through a three-hour budget, reaching step . Held-out Pfam test shards improve reconstruction from to and sparse CE from to relative to step , with CE logged diagnostically rather than optimized directly; target-barycenter alignment metrics do not materially improve, and a deterministic diagonal reference remains stronger on those metrics.
QAROO: AI-Driven Online Task Offloading for Energy-Efficient and Sustainable MEC Networks
With the rapid advancement of artificial intelligence (AI) and intelligent science, intelligent edge computing has been widely adopted. However, the limitations of traditional methods, such as poor adaptability and the slow convergence of heuristic algorithms, are becoming increasingly evident. To enable sustainable and resource-efficient edge applications, this paper proposes an online task offloading framework for wireless powered mobile edge computing (MEC) networks, called Quantum Attention-based Reinforcement learning for Online Offloading (QAROO). The system employs a binary offloading strategy with the aim of co-optimizing computing and energy resources in dynamic channel environments. In response to the issues of poor adaptability in traditional approaches and the slow convergence of heuristic algorithms, the framework integrates quantum neural networks and attention mechanisms, introducing three key improvements: using recurrent neural networks to enhance temporal modeling capability, proposing an uncertainty-guided quantization method to improve exploration efficiency, and incorporating attention mechanisms into quantum networks to strengthen feature representation. Experiments demonstrate that the proposed method outperforms comparative schemes in terms of normalized computation speed and processing time, offering an efficient and stable solution for online task offloading in large-scale Internet of Things (IoT) dynamic environments.
Emergent Self-Attention from Astrocyte-Gated Associative Memory Dynamics
We introduce a Hopfield-type associative memory in which effective connectivity is multiplicatively modulated by astrocytic gains evolving under an entropy-regularized replicator equation. The coupled neuron-astrocyte dynamics admit a Lyapunov function, ensuring global convergence. At fixed points, astrocytic gains implement a softmax-normalized allocation over pattern similarity scores, yielding a mechanistic realization of self-attention as emergent routing on the gain simplex. In regimes of high memory load and interference, the model significantly improves retrieval accuracy relative to classical Hopfield dynamics and recent neuron-astrocyte baselines. These results establish a dynamical systems framework linking glial modulation, competitive resource allocation, and attention-like computation.