Conditional Generative Modeling

Generative modeling frameworks have emerged as an effective approach to capture high-dimensional image distributions from large datasets without requiring domain-specific knowledge, a capability essential for disease progression modeling. Recent generative approaches have attempted to capture progression by mapping images to a latent space and guiding representations to generate follow-up images from previous time points. However, these methods impose constraints on distribution learning, resulting in latent spaces with limited controllability for generating follow-up images without paired subject-specific longitudinal guidance. In order to enable controlled movements in the latent representational space and generate progression images from a previous time-point image without subject-specific guidance, we introduce a conditionable Diffusion Auto-encoder framework that forms a compact latent space capturing high-level semantics and providing means to control generation. Our approach leverages this latent space to condition and apply controlled shifts to the representations of previous time-point images by isolating progression and subject identity information for generating follow-up images. The shifts are implicitly guided by correlating with progression attributes and constraining to Alzheimer's disease specific regions, without paired longitudinal guidance. We validate the generations through image quality metrics, volumetric progression analysis, and downstream tasks in Alzheimer's disease datasets from different sources. This demonstrates the effectiveness of our approach for Alzheimer's progression modeling and longitudinal image generation.

Existing tabular data generation methods primarily focus on matching statistical distributions between real and synthetic data, often overlooking the preservation of underlying causal relationships. As a result, generated samples may appear realistic while failing to maintain the causal structure required for reliable downstream analysis. We propose CA-GAN, a causal-aware generative framework for tabular data synthesis that explicitly incorporates causal knowledge into both the training and generation processes. CA-GAN first extracts a causal graph from real data to provide structural prior knowledge, then employs a graph-conditioned Conditional WGAN-GP whose sub-generators model variables according to their causal dependencies. More importantly, we introduce a reinforcement learning-based objective that treats causal graph discrepancy between real and synthetic data as a reward signal, enabling causal consistency to become an explicit optimization target during training rather than an implicit consequence of sampling order. Extensive experiments on 14 synthetic and real-world datasets demonstrate that CA-GAN consistently outperforms seven state-of-the-art baselines in causal preservation while achieving strong downstream utility, privacy preservation, and data quality. These results show that CA-GAN provides an effective and practical solution for generating high-quality synthetic tabular data that better respects underlying causal mechanisms.

Music generation models can produce high-fidelity coherent accompaniment given complete audio input, but are limited to editing and loop-based workflows. We study real-time audio-to-audio accompaniment: as a model hears an input audio stream (e.g., a singer singing), it has to also simultaneously generate in real-time a coherent accompanying stream (e.g., a guitar accompaniment). In this work, we propose a model design considering inevitable system delays in practical deployment with two design variables: future visibility $t_f$, the offset between the output playback time and the latest input time used for conditioning, and output chunk duration $k$, the number of frames emitted per call. We train Transformer decoders across a grid of $(t_f,k)$ and show two consistent trade-offs: increasing effective $t_f$ improves coherence by reducing the recency gap, but requires faster inference to stay within the latency budget; increasing $k$ improves throughput but results in degraded accompaniment due to a reduced update rate. Finally, we observe that naive maximum-likelihood streaming training is insufficient for coherent accompaniment where future context is not available, motivating advanced anticipatory and agentic objectives for live jamming.

Modeling dynamical systems and unraveling their underlying structural dependencies is central to many domains in the natural sciences. Various physical systems, such as those arising in cell biology, are inherently high-dimensional and stochastic in nature, and admit only partial, noisy state measurements. Our primary motivating setting is single-cell biology, where destructive measurements yield unpaired population snapshots rather than longitudinal trajectories of the same cells. This poses a significant challenge for addressing the problems of modeling the underlying dynamics and inferring the network structure of these systems. Existing methods are typically tailored either for structure learning or modeling dynamics at the population level, but are limited in their ability to address both problems together. In this work, we address both problems simultaneously: we present StructureFlow, a novel and principled simulation-free training approach for jointly learning the structure and stochastic population dynamics of physical systems. We showcase the utility of StructureFlow for the tasks of structure learning from interventions and dynamical (trajectory) inference of conditional population dynamics. We empirically evaluate our approach on high-dimensional synthetic systems, a set of biologically plausible simulated systems, and an experimental single-cell dataset. We show that StructureFlow can learn the structure of underlying systems while simultaneously modeling their conditional population dynamics --- a key step toward model-based mechanistic understanding of systems behavior.

Molecular graph generation (MGG) is essentially a multi-class generative task, aimed at predicting categories of atoms and bonds under strict chemical and structural constraints. However, many prevailing diffusion paradigms learn to regress numerical embeddings and rely on a hard discretization rule during sampling to recover discrete labels. This introduces a fundamental discrepancy between training and sampling. While models are trained for point-wise numerical fidelity, the sampling process fundamentally relies on crossing categorical decision boundaries. This discrepancy forces the model to expend efforts on intra-class variations that become irrelevant after discretization, ultimately compromising diversity, structural statistics, and generalization performance. Therefore, we propose TopBF, a unified framework that (i) performs MGG directly in continuous parameter distributions, (ii) learns graph-topological understanding through a Quasi-Wasserstein optimal-transport coupling under geodesic costs, and (iii) supports controllable, property-conditioned generation during sampling without retraining the base model. TopBF innovatively employs cumulative distribution function (CDF) to compute category probabilities induced by the Gaussian channel, thereby unifying the training objective with the sampling discretization operation. Experiments on QM9 and ZINC250k demonstrate superior structural fidelity and efficient generation with improved performance.

Compositional generalization, the ability to generate novel combinations of known concepts, is a key ingredient for visual generative models. Yet, not all mechanisms that enable or inhibit it are fully understood. In this work, we conduct a systematic study of which design choices critically determine compositional generalization in image and video generation. By isolating independent design axes, we identify two key factors strongly associated with compositional success: (i) whether the training objective operates on a discrete or continuous distribution, and (ii) the completeness of conditioning information about constituent factors during training. We also show that relaxing the discrete loss with an auxiliary continuous latent objective can partially recover compositional performance in discrete models like MaskGIT. Our findings, corroborated by diverse compositional tasks and preliminary evidence in world models and LLMs, motivate a shift toward continuous objectives for compositional generalization.

Internal variability is a dominant contributor to the uncertainty of predictions at the interannual to decadal timescale. A typical approach to separating the internal variability from forced climate responses is to generate large ensembles of simulations under different initial conditions. Due to the complexity of Earth System Models, generating these large ensembles is computationally expensive. In this work, we present ArchesClimate, a deep learning-based climate model emulator designed to reduce the cost of exploring internal variability at timescales ranging from monthly to decadal. ArchesClimate is trained on decadal hindcasts of the IPSL-CM6A-LR climate model. We train a flow matching model following ArchesWeatherGen, which we adapt to predict near-term climate. Once trained, the model generates states at a one-month lead time from the states of the two preceding months, and can be used to auto-regressively emulate climate model simulations. We show that for up to 10 years, these generations are stable and physically consistent. We also show that for several important climate variables, ArchesClimate generates simulations that are interchangeable with the IPSL model. This work suggests that climate model emulators could reduce the cost of generating large ensembles with climate models.

In high-stakes domains such as healthcare, privacy concerns severely limit the use of real-world training data. Differentially private (DP) synthetic data offers a promising alternative with formal privacy guarantees, but achieving strong utility remains challenging for clinical note generation due to domain specificity and long-form text complexity. We present Term2Note, a method for synthesising full-length clinical notes under DP constraints. By structurally separating content and form, Term2Note generates section-wise note content conditioned on medical terms, with terms and notes privatised under separate DP constraints, and applies a DP quality maximiser to improve outputs. Experiments demonstrate that Term2Note produces synthetic notes with statistical properties closely aligned with real clinical notes, and that downstream models trained on these notes achieve performance comparable to those trained on real clinical data. Compared to existing DP text generation baselines, Term2Note substantially improves both fidelity and utility, without relying on label distribution assumptions, highlighting its effectiveness as a practical privacy-preserving alternative to real clinical notes.

Actuarial ratemaking depends on high-quality data, yet access to such data is often limited by the cost of obtaining new data, privacy concerns, etc. In this paper, we explore synthetic-data generation as a potential solution to these issues. In addition to generative methods previously studied in the actuarial literature, we explore and benchmark another class of approaches based on Multivariate Imputation by Chained Equations (MICE). In a comparative study using an open-source dataset, MICE-based models are evaluated against other generative models like Variational Autoencoders and Conditional Tabular Generative Adversarial Networks. We assess how well synthetic data preserves the original marginal distributions of variables as well as the multivariate relationships among covariates. The consistency between Generalized Linear Models (GLMs) trained on synthetic data with GLMs trained on the original data is also investigated. Furthermore, we assess the ease of use of each generative approach and study the impact of generically augmenting original data with synthetic data on the estimation of GLMs for predicting claim counts. Our results highlight the potential of MICE-based methods in creating high-fidelity tabular data while offering lower implementation complexity compared to deep generative models.

Recent advances in continuous conditional generative modeling, including Continuous conditional Generative Adversarial Network (CcGAN) and Continuous Conditional Diffusion Model (CCDM), estimate high-dimensional data distributions conditioned on scalar regression labels such as angles, ages, or temperatures. However, fixed-size vicinal training in CcGAN can be sensitive to non-uniform label densities, whereas CCDM relies on computationally expensive iterative sampling. To address these issues, we propose CcGAN-AVAR, an imbalance-aware extension of CcGAN that combines soft/hybrid adaptive vicinity with auxiliary discriminator-guided regularization. The adaptive vicinity constructs a label-dependent local radius according to the available samples around each target condition, and the multi-task discriminator supplies both a regression signal for label consistency and a density-ratio-estimation signal for distribution matching. We further provide a theoretical interpretation characterizing how adaptive vicinal weighting affects the local bias-variance behavior of the discriminator target, how hybrid truncation reduces objective-level cross-condition mixing, and how the density-ratio-based generator penalty approximates a Pearson Chi-square discrepancy up to the estimation error of the density-ratio branch. Extensive experiments on four datasets, including the newly constructed imbalanced RC-49-I, covering resolutions from 64x64 to 256x256 across eleven settings, demonstrate that CcGAN-AVAR obtains strong generation quality and label consistency while preserving the one-step sampling efficiency of GANs, achieving 300x--2000x faster inference than CCDM.

The tabular form constitutes the standard way of representing data in relational database systems and spreadsheets. But, similarly to other forms, tabular data suffers from class imbalance, a problem that causes serious performance degradation in a wide variety of machine learning tasks. One of the most effective solutions dictates the usage of Generative Adversarial Networks (GANs) in order to synthesize artificial data instances for the under-represented classes. Despite their good performance, most of the proposed GAN models do not take into account the vector subspaces of the input samples in the real data space, leading to data generation in arbitrary locations. In addition, the class labels are handled in the same manner as the other categorical variables, so conditional sampling by class is rendered less effective. To overcome these problems, this study presents ctdGAN, a conditional GAN for alleviating class imbalance in tabular datasets. Initially, ctdGAN executes a space partitioning step to assign cluster labels to the input samples. Subsequently, it utilizes these labels to synthesize samples via a novel probabilistic sampling strategy and a new loss function that penalizes both cluster and class mis-predictions. In this way, ctdGAN generates samples in subspaces that resemble those of the original data distribution. We also introduce several other improvements, including a simple, yet effective cluster-wise scaling technique that captures multiple feature modes without affecting data dimensionality. The evaluation of ctdGAN with 14 imbalanced datasets demonstrated its strong ability in generating high fidelity samples and improving classification accuracy.

Sign language generation (SLG), also known as text-to-sign generation, aims to bridge the communication gap between signers and non-signers. Unlike many other generative tasks, SLG must satisfy two fundamental linguistic constraints. First, sign language expresses meaning through a sequence of gestures aligned with word-like units called glosses, and therefore requires correct lexical ordering to preserve intended meaning. Second, each gesture should faithfully reflect the intended gloss (semantic accuracy). Despite recent progress, existing SLG methods frequently produce signs with incorrect lexical order and low semantic accuracy. A common limitation of prior approaches stems from globally fused conditioning strategies, which weaken temporal grounding, the temporal correspondence between glosses and their realized sign segments. This often leads to incorrect lexical order and semantically ambiguous signs. To address this limitation, we propose SIGNER, a SIGN language generation framework with timE-Resolved conditioning to ensure temporal grounding, leveraging a temporal-gloss condition and local temporal fusion (LTF). SIGNER constructs a temporal-gloss condition by estimating a gloss sequence and its durations from input text, and assigning gloss semantics across the temporal dimension. We then introduce LTF, a temporally grounded fusion module that integrates the temporal-gloss condition within a constrained temporal window during denoising. By enforcing temporal locality in condition fusion, LTF preserves temporal grounding, leading to correct lexical ordering and clearer per-gloss semantics. Experiments on Phoenix-2014T and CSL-Daily demonstrate state-of-the-art performance, further supported by motion-smoothness analysis. The project page is available here https://taeryunglee.github.io/projects/signer.

Deep learning-based antimicrobial peptide (AMP) discovery faces critical challenges such as limited controllability, lack of representations that efficiently model antimicrobial properties, and low experimental hit rates. To address these challenges, we introduce OmegAMP, a framework designed for reliable AMP generation with increased controllability. Its diffusion-based generative model leverages a novel conditioning mechanism to achieve fine-grained control over desired physicochemical properties and to direct generation towards specific activity profiles, including species-specific effectiveness. This is further enhanced by a biologically informed encoding space that significantly improves overall generative performance. Complementing these generative capabilities, OmegAMP leverages a novel synthetic data augmentation strategy to train classifiers for AMP filtering, drastically reducing false positive rates and thereby increasing the likelihood of experimental success. Our in silico experiments demonstrate that OmegAMP delivers state-of-the-art performance across key stages of the AMP discovery pipeline, enabling us to achieve an unprecedented success rate in wet lab experiments. We tested 25 candidate peptides, 24 of them (96%) demonstrated antimicrobial activity, proving effective even against multi-drug resistant strains. Our findings underscore OmegAMP's potential to significantly advance computational frameworks in the fight against antimicrobial resistance.

Decoding neural activity into human-interpretable representations is a key research direction in brain-computer interfaces (BCIs) and computational neuroscience. Recent progress in machine learning and generative AI has driven growing interest in transforming non-invasive Electroencephalography (EEG) signals into images, text, and audio. This survey consolidates and analyzes developments across EEG-to-image synthesis, EEG-to-text generation, and EEG-to-audio reconstruction. We conducted a structured literature search across major databases (2017-2025), extracting key information on datasets, generative architectures (GANs, VAEs, transformers, diffusion models), EEG feature-encoding techniques, evaluation metrics, and the major challenges shaping current work in this area. Our review finds that EEG-to-image models predominantly employ encoder-decoder architectures built on GANs, VAEs, or diffusion models; EEG-to-text approaches increasingly leverage transformer-based language models for open-vocabulary decoding; and EEG-to-audio methods commonly map EEG signals to mel-spectrograms that are subsequently rendered into audio using neural vocoders. Despite promising advances, the field remains constrained by small and heterogeneous datasets, limited cross-subject generalization, and the absence of standardized benchmarks. By consolidating methodological trends and available datasets, this survey provides a foundational reference for advancing EEG-based generative AI and supporting reproducible research. We further highlight open-source datasets and baseline implementations to facilitate systematic benchmarking and accelerate progress in EEG-driven neural decoding.

We present a novel machine-learning (ML) approach (EM-GANSim) for real-time electromagnetic (EM) propagation that is used for wireless communication simulation in 3D indoor environments. Our approach uses a modified conditional Generative Adversarial Network (GAN) that incorporates encoded geometry and transmitter location while adhering to the electromagnetic propagation theory. The overall physically-inspired learning is able to predict the power distribution in 3D scenes, which is represented using heatmaps. We evaluated our method on 15 complex 3D indoor environments, with 4 additional scenarios later included in the results, showcasing the generalizability of the model across diverse conditions. Our overall accuracy is comparable to ray tracing-based EM simulation, as evidenced by lower mean squared error values. Furthermore, our GAN-based method drastically reduces the computation time, achieving a 5X speedup on complex benchmarks. In practice, it can compute the signal strength in a few milliseconds on any location in 3D indoor environments. We also present a large dataset of 3D models and EM ray tracing-simulated heatmaps. To the best of our knowledge, EM-GANSim is the first real-time algorithm for EM simulation in complex 3D indoor environments. We plan to release the code and the dataset.

Music recordings often suffer from audio quality issues such as excessive reverberation, distortion, clipping, tonal imbalances, and a narrowed stereo image, especially when created in non-professional settings without specialized equipment or expertise. These problems are typically corrected using separate specialized tools and manual adjustments. In this paper, we introduce SonicMaster, the first unified generative model for music restoration and mastering that addresses a broad spectrum of audio artifacts with text-based control. SonicMaster is conditioned on natural language instructions to apply targeted enhancements, or can operate in an automatic mode for general restoration. To train this model, we construct the SonicMaster dataset, a large dataset of paired degraded and high-quality tracks by simulating common degradation types with nineteen degradation functions belonging to five enhancements groups: equalization, dynamics, reverb, amplitude, and stereo. Our approach leverages a flow-matching generative training paradigm to learn an audio transformation that maps degraded inputs to their cleaned, mastered versions guided by text prompts. Objective audio quality metrics demonstrate that SonicMaster significantly improves sound quality across all artifact categories. Furthermore, subjective listening tests confirm that listeners prefer SonicMaster's enhanced outputs over other baselines.

Content-aware layout generation is a critical task in graphic design automation, focused on creating visually appealing arrangements of elements that seamlessly blend with a given background image. The variety of real-world applications makes it highly challenging to develop a single model capable of unifying the diverse range of input-constrained generation sub-tasks, such as those conditioned by element types, sizes, or their relationships. Current methods either address only a subset of these tasks or necessitate separate model parameters for different conditions, failing to offer a truly unified solution. In this paper, we propose UniLayDiff: a Unified Diffusion Transformer, that for the first time, addresses various content-aware layout generation tasks with a single, end-to-end trainable model. Specifically, we treat layout constraints as a distinct modality and employ Multi-Modal Diffusion Transformer framework to capture the complex interplay between the background image, layout elements, and diverse constraints. Moreover, we integrate relation constraints through fine-tuning the model with LoRA after pretraining the model on other tasks. Such a schema not only achieves unified conditional generation but also enhances overall layout quality. Extensive experiments demonstrate that UniLayDiff achieves state-of-the-art performance across from unconditional to various conditional generation tasks and, to the best of our knowledge, is the first model to unify the full range of content-aware layout generation tasks.

Speaker embeddings, or x-vectors, are widely used to represent speaker identity and speaker-related attributes, but existing embedding extractors are typically descriptive rather than generative: they map an observed speech segment to an x-vector, which is then used for downstream applications. We introduce ProPS, Prompted Profile Synthesis, a framework for generating distributions of speaker embeddings conditioned on natural language prompts such as "a thirties male speaker with an Indian accent". ProPS converts human-written profile descriptions into sentence embeddings and uses a mixture density network trained on a large-scale dataset to predict a Gaussian mixture model in the x-vector space. The model is trained by maximizing the likelihood that real speaker embeddings match the requested profile, and its generated distributions are evaluated by negative log-likelihood on held-out x-vectors and by attribute classification accuracies on sampled synthetic x-vectors. Experiments show that ProPS produces profile-conditioned distributions and generates x-vectors that preserve requested speaker attributes such as age, gender, accent, and prosodic characteristics. This design enables controllable speaker-profile synthesis for speech generation systems like Text-To-Speech (TTS) or Voice Conversion (VC) while anchoring generated distributions in observed speaker-embedding structure.