Retrieval-Augmented Generation
Also known as RAG
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49 papers in the last four weeks, up 36% on the four weeks before. 0.5% of all new papers.
Latest papers 503
A popular way to improve Retrieval-Augmented Generation (RAG) is to rewrite the user's question into several variants and search with all of them. We test whether this actually helps once the underlying search is already strong. Under one fixed, competitive pipeline (BGE dense retrieval, cross-encoder reranking, and MMR diversification), we compare four query-rewriting strategies (S1-S4) against two strong LLM baselines (HyDE, Query2Doc) on three datasets (HotpotQA, AmbigNQ, and the 512K-document EnterpriseRAG-Bench) over three seeds with paired-bootstrap significance tests. Our headline result is that rewriting alone is at best competitive with a strong baseline, but combining methods yields outsized gains because different strategies fail on different questions. A post-hoc union of four methods (S1+S3+S4+HyDE) improves HIT@10 over the baseline by +12.5 points on enterprise data (51.70 vs 39.22), and a five-method union reaches 52.98 (+13.8). Budget-matched controls capture only ~40% of this gain, confirming that complementarity, not retrieval budget, is the primary driver. On HotpotQA the union adds +1.6 to +1.8 points (p<0.001), saturating the all-method oracle; on AmbigNQ the same fusion hurts (-2.4 below the best solo, p<0.001), and we analyze when and why. Because rewriting is expensive, we evaluate in simulation a confidence-gated router that runs rewriting only when the baseline's own top-1 score is low. It captures about half of the enterprise full-merge gain (+4.3 HIT@10) while paying rewriting cost on <40% of queries, and automatically declines to rewrite on AmbigNQ. A downstream answer-quality evaluation confirms the router improves F1 by +1.92 (p<0.01) at roughly 40% of the expansion cost. In short: treat query rewriting as a complementary coverage source, applied through cost-aware routing, not as a standalone replacement for a strong baseline.
Compression Beyond the Uncompressed: A Two-Stage Training Recipe for Soft Context Compression in RAG
Retrieval-Augmented Generation (RAG) improves knowledge-intensive generation by conditioning language models on retrieved documents, but processing these documents becomes increasingly expensive as retrieval depth grows. Soft context compression reduces this cost by encoding documents into compact continuous representations that can be precomputed and reused across queries. However, many existing methods train compressed models by distilling from a full-context teacher. When the teacher is wrong, such distillation can reinforce its errors, while teacher imitation provides no direct signal for improving beyond the teacher. We propose DEX-Comp, a two-stage training recipe that separates reliable imitation from targeted exploration. Pure Distillation learns only from teacher-correct questions to mitigate error propagation, while Hard Exploration applies outcome-based reinforcement learning to teacher-failed questions to directly optimize answer correctness. Across five open-domain QA benchmarks and retrieval depths from top- to top-, DEX-Comp at compression outperforms all evaluated compression baselines and surpasses the untuned full-context RAG model in average accuracy, while reducing time-to-first-token by --. Evaluations across additional datasets and backbones further demonstrate its generalization.
STAIR (STructure Aware Information Retriever): A novel dataset and LLM based retriever for document structure augmentation
Retrieval Augmented Generation (RAG) is a key component for generating accurate and hallucination free answers using Large Language Models (LLMs). LLMs are improving at handling long context, but still suffer from "lost in the middle" problem. Thus, precise and accurate retrieval is important. Current retrievers chunk long context into length-based manageable chunks - in the process throwing away rich and informative semantic global structure in the corpus. We introduce a novel retrieval system STAIR that empowers an LLM to exploit global structure in a corpus such as a Table of Contents (ToC) to efficiently store and retrieve information from its model parameters. Our thorough and careful ablation studies with a finetuned Differentiable Search Index (DSI) system show that ToC helps build a low hallucination (less than 0.05%) generative Information Retrieval (IR) system and can generalize to examples where very few training samples are available. To further research in this novel direction of ToC based retrieval we release SearchTome - a diverse benchmark created from 18 books across 6 diverse domains to further research in this novel direction. STAIR achieves a high Recall@1 score of 82.6% on SearchTome as compared to DSI (76.9%), where the difference is found to be statistically significant. STAIR easily beats other strong baselines such as BM25 (59.5%), DPR (68.7%) and out-of-the-box Mistral (13.8%).
When Retrieval Helps: Selective Retrieval for Single-Turn Mental-Health QA
Retrieval-augmented generation (RAG) can improve the specificity and grounding of large language model responses, but its effect is not uniformly beneficial in single-turn mental-health question answering, where user queries often combine emotional distress, treatment concerns, and safety-sensitive needs. We study when retrieval helps or hurts mental-health QA, and whether a lightweight selective retrieval policy can better control this trade-off. We operationalize retrieval need using three draft-conditioned utility dimensions: psychoeducational need, coping need, and response specificity, together with a rule-based safety trigger. Following psychotherapy-grounded RAG systems such as coTherapist, we construct a compact and controllable guideline corpus comprising coping-strategy, psychoeducational, and safety resources. We fine-tune an instruction-tuned generator on MentalChat16K using QLoRA and compare Closed-book, Always Retrieval, and Selective Retrieval settings on CounselBench-Eval and CounselBench-Adv. Experiments show that retrieval is not uniformly beneficial in this domain. Always Retrieval improves specificity but lowers overall quality and introduces additional safety-sensitive failures. Selective Retrieval preserves closed-book behavior for low-need cases while avoiding the additional degradation caused by unconditional retrieval, supporting the view that retrieval activation is a safety-sensitive control decision.
Measurement-Driven Sub-Network Selection for On-Premise Retrieval-Augmented Factory Agents
On-premise assistants can give factory workers conversational access to machine documentation, but models capable of the task rarely fit shop-floor hardware. We show that after structural compression and retrieval-grounded adaptation, model size is no longer a reliable predictor of adapted answer quality: general capability falls almost linearly with parameter count, while judged retrieval-augmented answer quality does not. We therefore treat deployment as a post-adaptation selection problem, committing one sub-network per device on judged answer quality and measured on-device throughput under a configurable general-capability floor and memory budget; rules that optimize size, speed, or quality alone each give up capability or throughput. A weight-shared supernetwork trained with sandwich-style in-place distillation keeps this selection inexpensive. In a manufacturing-manual case study, extraction costs 13.7 percent of the unpruned model's judged quality and retrieval-grounded distillation returns it to within 4.6 percent, recovering two thirds of the loss, and the same assistant runs across three heterogeneous edge tiers at 1.3 to 5 watts standby.
Incremental Pooled LLM Evaluation for Cost-Effective Retrieval Model Selection
Selecting a retrieval model for a production RAG system requires reliable comparative evaluation, but obtaining relevance judgments at scale is expensive and difficult to repeat as new candidate systems arrive. We study pooled LLM evaluation, in which an LLM judges the union of documents retrieved by the current set of candidate systems, and the pool is then expanded incrementally as new systems are introduced by judging only the new documents they contribute. These judgments are reused to evaluate all systems on a common basis. We validate this approach on four retrieval benchmarks with 11 systems spanning dense, sparse, and hybrid configurations, and deploy it to compare 62 retrieval configurations for a financial news QA system. Pooled LLM rankings correlate strongly with gold-standard evaluation across datasets, and 97% of pairwise system orderings are preserved once bootstrap uncertainty in the qrels is taken into account. In production, document overlap yields 65-80% judgment reuse and up to 4.9x lower evaluation cost, allowing teams to benchmark new retrieval candidates without re-judging previously assessed documents. These results suggest pooled LLM evaluation is a practical and cost-effective workflow for incremental retrieval model selection in deployed systems.
DKL: Decoupled Knowledge Learning for Instruction-Tuned Language Models
RAG has become the de facto method for incorporating new, corpus-specific knowledge into an instruction following LLM (Instruct LLM). Although RAG-based prompting improves factual grounding, it fails when retrieval is incorrect or incomplete, leading to hallucinations. Finetuning methods such as RAFT and PA-RAG enhance RAG by injecting new knowledge into the model's parameters, but require generating a massive amount of synthetic QA that covers the entire corpus. Extended Pre-Training (EPT) on the text corpus avoids the need for comprehensive synthetic data generation but compromises an Instruct LLM's instruction-following capabilities, necessitating instruction fine-tuning (IFT) after pre-training. However, IFT is costly and may be infeasible due to the unavailability of an instruction-tuning corpus. In this work, we propose DKL-Decoupled Knowledge Learning for Instruction-Tuned Language Models. Instead of doing EPT on the Instruct LLM, DKL performs EPT on its corresponding base LLM to infuse new knowledge. These knowledge infused weights are then merged with the Instruct LLM, imparting new knowledge without affecting their instruction-following capabilities. DKL is a lightweight method that avoids expensive instruction fine-tuning and relies on model merging to infuse the new knowledge into the Instruct LLM without destroying its instruction following capabilities. Empirical results show that DKL improves RAG accuracy from 54.17 to 79.26 on retrieval failure cases, while outperforming prior approaches with substantially less training data.
ViSAR: Training-Free Adaptive- Retrieval for Visual Document Question Answering
Document Visual Question Answering (DocVQA) often leverages Retrieval-Augmented Generation (RAG), where late-interaction encoders are commonly used to identify document pages relevant to a user query, before answer generation by a Large Vision-Language Model (LVLM). Existing approaches typically retrieve a fixed top- number of pages regardless of query complexity, which increases LVLM latency and may degrade answer accuracy. We introduce ViSAR (Visual Semantic Activation Retrieval), a training-free adaptive- retrieval method for late-interaction visual document retrieval. ViSAR operates directly in the embedding space to construct a query-conditioned page-level similarity matrix that highlights query-relevant semantics and dynamically determines the number of pages to retrieve. Across multiple encoders and LVLMs, ViSAR retrieves compact, query-adapted page sets that reduce RAG latency by up to 58.7%, while maintaining or improving answer accuracy compared with fixed top- and adaptive retrieval heuristics. Furthermore, we show that the similarity matrix structure correlates with answer accuracy, suggesting future directions for retrieval quality-aware document understanding.
Improving Health Literacy through Lay Summarization of Radiological Reports: An Evaluation of BioNER and Retrieval-Augmented Generation
Radiology reports are written primarily for clinicians, and their specialized terminology often makes them difficult for patients to interpret. As a result, many patients turn to publicly available Large Language Models (LLMs) to help explain their reports, despite well-documented risks of factual inaccuracies and hallucinations. Automated lay-summary generation has emerged as a promising alternative, yet the effectiveness of retrieval-enhanced and clinically informed approaches for radiology-specific communication remains underexplored. This study investigates the extent to which Retrieval-Augmented Generation (RAG) and Named Entity Recognition (NER) improve the quality, factual consistency, and readability of automatically generated lay summaries compared with standard LLM-based generation. We develop a framework combining NER-based extraction of clinically relevant findings with a RAG mechanism for contextual grounding, evaluated across few-shot and fine-tuned variants of two models (Qwen, BioBART). Results show that NER consistently improves readability and overall quality, while RAG alone offers no benefit and can introduce hallucinations from irrelevant retrieved terms. Combining RAG with NER degrades performance in few-shot settings but improves readability when fine-tuned. Fine-tuned BioBART with NER achieves the best overall performance, highlighting entity-aware extraction as the primary driver of improved patient-friendly summaries.
Cite or Decline: A Strict Course-Grounded Chatbot for STEM Lecture Videos
Recorded lecture videos, often enhanced with search and summarization features, are a standard study resource. However, students cannot easily ask course specific questions or verify answers against an instructor's lecture. We report a semester-long deployment of VideoPoints platform with a retrieval-augmented chatbot that answers from course lecture materials and returns timestamped citations. The chatbot retrieves only from the active course, uses chapter summaries to guide transcript ranking, and returns clickable timestamped citations. Students used it for quick lookups and exam review. Across 833 messages, 70.5% included citations, none crossed a course boundary, and when no lecture evidence matched, the chatbot usually declined rather than answering. Among the users, citations were the most consistently useful feature, while practice-question generation was the strongest unmet request. We also evaluated the design on the real-world test split of EduVidQA, a public multimodal benchmark for lecture-video question answering. Our design improved correct-lecture retrieval by 6.3 percentage points over dense-only retrieval. Together, the results show that effective deployment depends on course isolation, supported citations, and alignment with students' study practices.
Adaptive Critical Token-Aware Retrieval for Repository-Level Code Generation
The repository-level code generation task requires synthesizing code that satisfies task requirements while remaining consistent with the target repository context. Since real-world repositories often exceed the input length limits of LLMs, existing approaches commonly adopt retrieval-augmented generation (RAG) to provide repository-specific context. Despite improving repository-context retrieval, existing methods typically provide context as task-level support, without explicitly identifying the critical tokens that require fine-grained repository context during generation. During the autoregressive generation process of LLMs, errors often concentrate at a small number of decisive positions: once such tokens are generated incorrectly, subsequent code may follow an incorrect semantic path and eventually lead to functional failure. We refer to these positions as "critical tokens". In this paper, we propose ACToR, an adaptive critical token-aware retrieval framework for repository-level code generation. ACToR identifies critical tokens during generation and triggers targeted retrieval on demand to provide repository context at these decisive positions. In addition, we design a position-aware weighting method for dense retrievers to prioritize context that is more informative for generation. We evaluate ACToR on two representative repository-level benchmarks, RepoExec and CoderEval. Experimental results show that ACToR consistently outperforms state-of-the-art methods, achieving relative improvements of 8.4% on RepoExec and 15.4% on CoderEval. Beyond performance gains, we systematically quantify the impact of critical tokens, revealing their central role in major generation failures and highlighting the necessity of targeted retrieval strategies. We provide the code and data at https://github.com/DeepSoftwareAnalytics/ACToR.
SCoNE: Selective Context-aware Neuron Editing for Robust Retrieval-Augmented Generation
Retrieval-Augmented Generation (RAG) is highly sensitive to retrieval noise: when retrieved documents mix informative and irrelevant context, LLMs are easily distracted, leading to hallucinations. To overcome this, we propose SCoNE (Selective Context-aware Neuron Editing), a training-free model editing approach that improves retrieval noise robustness by selectively strengthening context-aware FFN neurons that are identified by both high attribution and high cross-input variability. SCoNE requires only a small number of mining samples, no fine-tuning, and no inference-time overhead. Across various knowledge-intensive question-answering benchmarks and two LLM backbones, SCoNE consistently outperforms competitive baseline methods. Our code is available at https://github.com/HYU-ARK-Lab/SCoNE.
ExpArt-KG: Artwork Image Description Generation through Iterative Exploration of Knowledge Graphs
Large Vision-Language Models (LVLMs) achieve strong performance on image-grounded text generation and visual question answering. However, it remains difficult for them to comprehensively and accurately describe the factual relations among the entities and concepts associated with the objects depicted in an image. In this work, we propose a framework that efficiently exploits factual information from a knowledge graph via retrieval-augmented generation (RAG), with the goal of enabling LVLMs to generate detailed and accurate image explanations. Specifically, our method alternates between answer generation and knowledge-graph retrieval, and controls the search using a correctness judgment, thereby acquiring the necessary and sufficient factual information efficiently. We also construct a knowledge graph for the artwork domain (ExpArt-KG), in which the correspondence between images and entities is unambiguous. Applying the proposed method to this knowledge graph, we show experimentally that it improves the level of detail of artwork explanations and reduces the retrieval cost of external knowledge while maintaining generation quality comparable to that of iterating a fixed number of times.
Feedback-Assisted Trust Propagation over Document Relation Graphs for Retrieval-Augmented Generation
Retrieval-augmented generation (RAG) systems rely on external corpora that may contain outdated, contradictory, noisy, or unreliable documents, introducing reliability risks. Prior work has leveraged document relations to improve the answer reliability of RAG. To propagate reliability signals beyond directly compared document pairs, we propose TrustPropRAG, which structures document relations as a graph and estimates document reliability through multi-hop propagation across the graph. TrustPropRAG anchors this propagation with a limited set of human feedback on document reliability, extending these costly-to-collect feedback-based reliability signals across the whole corpus. Specifically, based on the constructed document relation graph, TrustPropRAG estimates a trust score for each document by formulating and solving an optimization problem that jointly captures pairwise document relations and user feedback. These scores are then used to improve the selection of reliable documents and support trust-aware answer generation. Evaluation results show that TrustPropRAG improves both retrieval quality and exact match over baselines, and remains robust under sparse and noisy feedback.
SpecMind: Enabling Spectrum Intelligence via Multi-Agent Hybrid Retrieval-Augmented Generation
The exponential growth of wireless devices is driving unprecedented spectrum demand, pushing spectrum management toward more fine-grained decisions across space, time, and device constraints. As a result, spectrum policymakers and engineers must process large volumes of data that come from diverse sources and take many different forms, such as text and tables. These data sources are often disaggregated and require significant time and effort to integrate, search, and interpret. Furthermore, most of this information is formatted for human understanding and is not readily accessible to automated systems. To address this challenge, we propose SpecMind, a novel Multi-Agent Retrieval-Augmented Generation (RAG) system for spectrum intelligence that performs reasoning over heterogeneous data sources. This system enables autonomous agents to coordinate specialized sub-agents that retrieve and synthesize knowledge across policy proceedings, legal regulations, and license databases. We develop SpecBench, a question and answer (Q&A) dataset based on real-world license records and policy proceedings, addressing the lack of evaluation resources for RAG systems in the spectrum domain. Experimental results demonstrate that SpecMind outperforms traditional, general-purpose RAG systems across spectrum-related tasks, achieving over 80% win rate against strong baselines. The agent-based design enables more accurate retrieval, better contextual reasoning, and improved task completion across diverse query types.
Configurable Semantic Chunking for Biomedical Information Extraction in Retrieval-Augmented Generation
BioMedRAG introduced retrieval-augmented generation with a learned chunk scorer for biomedical information extraction. However, it relies on fixed-size chunking which can fragment semantic evidence. We propose a configurable semantic chunking framework that addresses this limitation by combining entity-preserving windows, trigger-centered chunking, proposition-first extraction, tiered trigger prioritization, and hierarchical relation resolution. The framework integrates with BioMedRAG by replacing only the chunk construction stage while preserving the embedding model, learned chunk scorer, generator, and evaluation protocol. We evaluate the framework on biomedical relation extraction benchmarks (GM-CIHT, DDI, ChemProt) and adverse event classification (ADE). On GM-CIHT, the full hybrid configuration achieves 82.6% F1, improving over the fixed-size baseline (74.2% F1) by 8.4 points under our experimental setup. Cross-dataset analysis shows that semantic chunking improves extraction datasets with explicit relation cues, such as GM-CIHT and DDI, while fixed chunking remains competitive or stronger for dense biochemical extraction and binary classification settings such as ChemProt and ADE. By externalizing chunking logic into configuration files, the framework provides an interpretable and adaptable alternative to rigid fixed-size chunking for biomedical RAG pipelines.
Generative artificial intelligence for reliable mechanistic reasoning for corrosion
Corrosion accounts for approximately 4% of global GDP, and reliable prediction is essential for timely mitigation. Machine learning effectively predicts corrosion rates from composition, microstructure, and environmental variables, but cannot explain the underlying mechanisms. A reliable approach in safety-critical materials engineering requires not only accurate retrieval but also mechanistically defensible reasoning, a capability that existing factuality metrics cannot assess. This work presents a domain-adapted retrieval-augmented generation framework for corrosion knowledge synthesis, demonstrated on magnesium alloy corrosion. Three open-weight language models (Llama-3.1-8B, Qwen-2.5-7B, Mistral-7B) are fine-tuned on 3,309 expert-verified question-answer pairs from 840 peer-reviewed papers and integrated with a hybrid dense-lexical retrieval pipeline. Retrieval augmentation produces Token F1 gains of 143-194%, with system faithfulness of 0.964 and context recall of 0.988. Blind external validation on newly published literature and in-house electrochemical data confirms trend-level generalisation. Reason Map, a proposition-graph framework, is further introduced; it independently constructs directed evidence graphs from generated answers and retrieved literature, enabling systematic detection of causal direction inversions and unsupported inferential leaps that flat factuality metrics cannot expose. The modular architecture can be applied across domains, offering a generalizable blueprint for trustworthy AI-assisted knowledge synthesis to circumvent corrosion, which can also be applied to other engineering domains.
SearchWiki: Learning to Build and Navigate Knowledge Wikis for Active Information Seeking
Flat retrieval-augmented generation treats a corpus as a bag of chunks, discarding document hierarchy and cross document structure. We introduce SearchWiki, a harness framework that synthesizes a corpus into a hierarchical, typed, navigable wiki and trains an agent, WikiResearcher-9B, to retrieve information through multi-turn tool use. The wiki organizes knowledge into three layers - document overviews, cross- document topic pages, and page-level source records; enabling progressive refinement of retrieval when initial lookup misses. We optimize the agent's navigation policy with on-policy reinforcement learning with a multi-component reward function balancing answer correctness, retrieval quality and trajectory efficiency. Evaluation on ViDoRe-V3 (8 domains), FinanceBench, and memory benchmarks (LoCoMo, LongMemEval, PersonaMem-v2) shows that WikiResearcher- 9B which is our RL-tuned Qwen 9B model, significantly outperforms same-size untrained baselines and exceeds or matches larger external models. SearchWiki paired with WikiResearcher-9B demonstrates that learned navigation over structured corpora is a superior alternative to flat retrieval.
PAGE-RAG: Provenance-Aware Graph Evidence Promotion for Fixed-Budget Multi-hop Retrieval-Augmented Generation
Multi-hop question answering in retrieval-augmented gener?ation (RAG) often benefits from retrieving beyond the few candidates that will finally be read: narrow retrieval can miss an indispensable hop, while expanded retrieval introduces topical distractors. This challenge is not tied to a particu?lar knowledge-base format. Candidate pools may come from standalone retrievers, standard RAG backends, or graph-based retrieval pipelines. What is needed is a query-aware selection layer that can use relational structure to filter candidates be?fore generation. PAGE-RAG addresses this setting by using a graph as a temporary selection structure, rather than assum?ing a graph-structured knowledge base. It builds a query-local graph over retrieved candidates, records why candidates are connected, and treats each connection as a support hypothe?sis rather than support itself. We identify the resulting failure mode as a connectivity-support gap: connected candidates do not necessarily support the answer. We propose PAGE-RAG, a Provenance-Aware Graph Evidence promotion method that scores candidate paths with relevance, source-tracing meta?data, specificity, hubness, noise, and coherence signals, and applies minimal sufficient selection to promote supporting facts into a compact reader context. PAGE-RAG can serve as a complete retrieval-to-reading pipeline, and the same promo?tion stage can be inserted after existing retrieval or RAG sys?tems without replacing their upstream retrieval logic. Across three multi-hop QA benchmarks under the same final bud?get, PAGE-RAG improves support F1 and answer F1 by 10.4 and 3.3 points on a weighted average over a strong retriever. As a plug-in, PAGE-RAG further improves all reported RAG backends, including reasoning-oriented, compression-based, graph-based, and document/chunk-level systems.
AgenticRag-R1: Agentic Reinforcement Learning with Stack Memory for Multi-Step Reasoning, Retrieval and Memorizing
Retrieval-Augmented Generation (RAG) improves the factuality of large language models (LLMs), yet existing RAG systems often struggle with complex, multi-step reasoning that requires adaptive retrieval and continuous revision of intermediate contexts. Recent reinforcement learning (RL)-based agentic RAG methods partially alleviate this issue, but typically rely on coarse-grained action spaces and trajectory-level rewards, resulting in weak reward assignment and a bias toward short-horizon, stereotyped reasoning template. To address, we propose AgenticRag-R1, a RL framework that deeply integrates reasoning, retrieval, and memory via a memory stack and fine-grained action space, supported by hierarchical action-aware rewards and an information-aware trajectory rejection strategy to enable effective long-horizon learning. Experiments across a diverse set of multi-hop, open-domain, and agentic reasoning benchmarks, spanning multiple backbone model sizes, demonstrate that AgenticRag-R1 consistently outperforms strong baselines. Moreover, AgenticRag-R1 learns more robust, interpretable, and memory-aware reasoning behaviors, highlighting the effect of fine-grained action modeling and information-aware optimization for long-horizon reasoning. Our code is anonymous available at https://github.com/jiangxinke/Harness-RL/tree/AgenticRAG-R1-Whitebox.
A Storage-Retrieval Gap in Parametric Knowledge Graph Memory
Graph retrieval-augmented generation places retrieved subgraphs into the model's context window at query time, paying a recurring token cost and exposing source data on every call. We study an alternative: compiling a knowledge graph offline into a bank of LoRA adapters, one per entity, that serve as a parametric knowledge layer queried by injecting weights rather than text, at zero query-time context cost. On the MetaQA dataset, we find that subgraph-trained adapters encode context-free factual knowledge that generalizes to unseen questions: on single-valued relations the adapter gains exact-match score over a base model that is nearly blind closed-book (), and only the correct adapter recovers this knowledge (an oracle gap of over the base model). However, the stored knowledge is not recoverable by similarity: given a query with no subgraph, embedding-based and weight-space geometry retrieval both perform at chance, because a semantically neighbouring entity's adapter does not contain the answer - knowledge is stored locally and does not transfer. Weight geometry correlates with subgraph semantics () but not with functional retrievability. We quantify the byte and context-token costs against graph retrieval-augmented generation and discuss deployment implications. Our results establish that parametric knowledge graph memory is feasible for storing knowledge, and identify selecting and composing the right adapters by a mechanism other than semantic similarity as the central open problem - motivating a learned, query-conditioned composition mechanism.
Homo-RAG: Homology-Guided Retrieval-Augmented Generation for Cross-Species Gene Function Prediction
The functional annotation of genes in non-model organisms remains a significant challenge in computational biology, with 20-70% of sequenced genes lacking characterized functions. Traditional homology-based methods are often costly and strongly dependent on high sequence similarity. This study presents Homo-RAG, a framework for large language model-based gene function prediction that integrates homology-guided multi-hop retrieval with evidence-aware ranking. The framework exploits biological relationships between zebrafish and human orthologs to guide evidence acquisition from ZFIN, UniProt, and PubMed through hybrid dense and lexical retrieval. An Evidence Confidence Score (ECS) integrates semantic relevance, entity matching, orthology information, source reliability, and literature association signals to refine the ranking of retrieved evidence. Extensive evaluation across 150 queries and 7,200 retrieved documents shows that evidence weighting parameter of lambda=0.50 improves NDCG@10 to 0.9879 and MRR to 0.99, while retrieving relevant evidence for 99.33% of queries. Furthermore, 80% of the retrieved documents are query-exclusive, indicating that evidence quality complements rather than replaces retrieval relevance. These findings establish Homo-RAG as a practical and robust framework for reliable, evidence-grounded gene function prediction in understudied organisms. The study addresses important limitations of conventional annotation pipelines while identifying opportunities for future improvements in evidence features and attribution mechanisms.
Query Expansion Should Be Coordinated: Dense Expands, Sparse Anchors
Retrieval-augmented generation (RAG) systems rely on retrieval modules to ground large language model (LLM) outputs. LLM-based query expansion enriches retrieval with document-like passages, but evaluations of hybrid retrieval often fuse fixed top-L prefixes of dense and sparse rankings. Because L controls cross-channel contributions and ranking access, it can alter measured expansion gains. We therefore evaluate complete-list effectiveness and record per-channel replay stopping depths required to certify the ordered top-K. This changes the design: because both rankings determine the fused result, their query constructions should be coordinated rather than designed independently. We present DESA (Dense Expansion and Sparse Anchoring), which shares generated references across channels but specializes their integration. Orthogonal residual expansion adds new semantic directions to the dense query, whereas score-product anchoring reorders the original sparse support without admitting expansion-only matches. The same references thus play complementary roles: Dense expands; Sparse anchors. Across seven BEIR datasets, DESA improves nDCG@10 and Recall@20 over the unexpanded query by 3.82% and 2.38%, while reducing dense and sparse replay stopping depths by 36.90% and 36.56%.
Who Speaks Matters: Authority-Aware Multi-View RAG over Italian Parliamentary Proceedings
Parliamentary proceedings are a primary record of democratic deliberation, yet their volume and fragmentation make multi-perspective access difficult for citizens, journalists, and researchers. Applying Retrieval-Augmented Generation (RAG) to parliamentary transcripts introduces three specific risks: dominance of the most frequent speakers, inability to weight speakers according to topical expertise, and citation misattribution in politically sensitive text. We present ParliamentRAG, a RAG system for the Italian Chamber of Deputies that addresses these risks jointly. Its core contribution is a topic-dependent authority model that estimates each speaker's authority as a function of the current query, combining interpretable components such as profession, education, and previous interventions. Given a user query, the system retrieves relevant speech chunks, identifies topic-relevant experts across parliamentary groups, and generates a summary synthesizing their perspectives, accompanied by supporting quotations. ParliamentRAG is evaluated against Google NotebookLM on 15 policy topics via a two-level protocol combining automated metrics and blind A/B human evaluation by six domain experts. The system achieves higher coverage across political groups (0.97 vs. 0.95), perfect quotation faithfulness (1.00 vs. 0.95), and stronger expert preferences on source-related dimensions, while NotebookLM remains stronger on prose-oriented dimensions.
Better Decomposition, Free Aggregation: A Synthesizer-Folding Framework for Multilingual Multi-Hop Question Answering
Multilingual retrieval-augmented generation (mRAG) equips large language models with access to globally distributed external knowledge for complex multilingual question answering. Recent approaches either translate retrieved documents into English or the query language to bridge the cross-lingual semantic gap, or decompose a complex query into sub-questions and aggregate the intermediate reasoning process. However, both lines of work suffer from two limitations. First, one-size-fits-all translation alignment, blanket translation discards culturally and linguistically native information unique to the target language, introduces translation noise, and inflates system cost. Second, greedy decomposition and aggregation, uncontrolled decomposition produces redundant sub-questions that compound errors during step-wise reasoning, and the final aggregation over reasoning paths further amplifies these errors. We address both with our method Syfer, a synthesizer-folding framework for multilingual multi-hop question answering that defers translation rather than applying it by default. Syfer first invokes a format-constrained decomposer to produce a sub-question graph in the original language, followed by a decomposition-quality check; when the check passes, sub-questions are answered sequentially under a retrieve-then-answer policy in the target language, and the English translation pathway with bilingual sub-question graph alignment is activated only when the check fails. Experiments across multiple languages show that Syfer attains competitive accuracy while striking a favourable balance between performance and computational cost.
HybridRAG-BN: A Retrieval-Augmented Framework with Fine-Tuned Verification for Bangla KBQA
Knowledge-base question answering (KBQA) systems rely on effective retrieval and reasoning mechanisms to generate accurate answers from external knowledge sources. However, developing reliable KBQA systems for low-resource languages such as Bangla remains challenging due to limited retrieval-focused research, scarce language resources, and difficulties in grounding generated responses in external knowledge. In this work, we propose HybridRAG-BN, a retrieval-augmented framework for Bangla KBQA that integrates hybrid retrieval using BM25 and BGE-M3, answer generation using the GGUF version of Gemma-4-31B-Instruct, and a LoRA-fine-tuned Gemma-4-31B-Instruct model for answer verification and refinement. To further improve robustness, the framework incorporates a post-processing stage that addresses unresolved cases through fallback answer replacement and DuckDuckGo-assisted retrieval. Experimental results demonstrate the effectiveness of the proposed framework, achieving token-level F1 scores of 0.71654 and 0.72912 on the public and private leaderboards, respectively, securing first place in the competition.
Privacy-Preserving RAG by Concealing Sensitive Information from External LLMs
Retrieval-Augmented Generation (RAG) is widely used to improve the performance of Large Language Models (LLMs) in answering user queries. Existing privacy research on RAG has focused on preventing unauthorized users from accessing sensitive data. However, another important problem that is often overlooked in RAG privacy research is that external generators have access to the query and the retrieved documents, which may contain confidential information that could potentially be misused or accessed for unintended purposes. In this paper, we introduce the Sensitive Entity Alias Generator (SEAG), a privacy-preserving framework that empowers users to utilize powerful third-party generators without disclosing sensitive information. SEAG introduces a lightweight model that locates sensitive entities, generates corresponding aliases, and constructs an entity replacement table. The table is used to replace sensitive words in the user's query and in the retrieved documents before they are forwarded to an external generator. For this purpose, two datasets were constructed: one for fine-tuning SEAG models to generate entity replacement tables, and another for evaluating the entire SEAG framework. The experimental results demonstrate the success of the SEAG framework. As for the User metric, which measures the ability of the model to provide a correct response to the user while hiding sensitive information from the external generator, all SEAG models achieved over 80% accuracy. Additional analysis further evaluated the ability of SEAG models Qwen-3, LLaMA-3.2, and Phi-4 to hide all sensitive entities within given documents. The results show good performance with total accuracies of 77.83%, 76.73%, and 74.91%, respectively.
A corpus-specific clinical RAG system matches or outperforms newer frontier LLMs on HealthBench
General-purpose large language models (LLMs) have recently been reported to match or exceed specialized clinical AI tools on medical benchmarks, but such comparisons draw on a narrow set of systems and on benchmarks developed largely in high-income settings. We evaluate VITA, a retrieval-augmented generation (RAG) system purpose-built for contextual knowledge retrieval in India and other low- and middle-income (LMIC) settings. VITA retrieves from a curated corpus of disease-specific guidelines, India-specific antimicrobial resistance data, national formulary constraints, and resource-limited care protocols; its architecture and corpus are proprietary, but the benchmark, the physician-written rubrics, and our full response and scoring outputs are public for independent verification. On 4,023 English-language HealthBench questions (80.5% of the benchmark), scored with a GPT-4.1 judge, VITA ranked first with 51.9% of possible rubric points, ahead of GPT-5.4 (46.1%), o4-mini (44.3%), Gemini 3.1 Pro (42.6%), and Claude Sonnet 4.6 (37.3%), and scored highest on 45.4% of questions. To test robustness to newer models and judge lineage, a 500-question subset was re-run against current-generation models (GPT-5.5, Claude Opus 4.8, Gemini 3.5 Pro, Grok 4.3) and graded by a neutral open-weight judge (DeepSeek-V4-Pro) sharing no lineage with any system tested. Here the gap narrowed to parity: VITA and GPT-5.5 were statistically indistinguishable on mean per-question score, while VITA led on points-weighted score and won the most questions. VITA's advantages in accuracy and completeness persisted under the neutral judge; its communication scores were lower. These results indicate that a purpose-built clinical RAG system remains competitive with frontier LLMs on an open benchmark, consistent with corpus specificity as a design variable that improves grounding at some cost to communication polish.
SAG: SQL-Retrieval Augmented Generation with Query-Time Dynamic Hyperedges
While retrieval-augmented generation (RAG) has proven effective at giving LLMs access to external knowledge, mainstream dense-retrieval implementations remain inherently limited in handling structured constraints and multi-hop reasoning. Graph-based methods address this by constructing knowledge graphs offline, but they often fragment semantics, incur high maintenance, and complicate incremental updates. We propose SAG (SQL-Retrieval Augmented Generation), a structured retrieval architecture that organizes documents into an event-entity index without building a global knowledge graph. SAG represents each chunk as a semantically complete event paired with its entities, forming a latent hyperedge that preserves n-ary relations without decomposing them into triples. At query time, SAG treats shared entities as join keys to connect related chunks. This dynamically yields a query-scoped neighborhood of events, and yet every piece of evidence remains the original chunk throughout. Experiments on HotpotQA, 2WikiMultiHopQA, and MuSiQue show that SAG achieves the best retrieval and end-to-end QA performance on every benchmark, with gains that widen as reasoning-chain complexity increases. On MuSiQue, where multi-hop evidence chaining is most demanding, SAG reaches 80.36% Recall@5, outperforming the strongest baseline by 11.52 points. This work paves the way for knowledge infrastructure that enables LLM agents to retrieve and reason over continually growing organizational knowledge.
QV-PIC: Query-Aware Visual Position-Independent Caching for Efficient RAG Serving
Retrieval-Augmented Generation (RAG) repeatedly prefills identical text chunks across queries, incurring redundant computations. Position-Independent Caching (PIC) mitigates it by reusing precomputed Key-Value (KV) across positions, but its efficiency is constrained by the large volume of text tokens. Rendering text chunks as images can compress the text into fewer visual tokens, but the rendered-image PIC suffers more severe quality degradation than the text PIC. This representation-specific gap primarily arises from contextual mismatches across independently compiled caches and the loss of fine-grained textual evidence during visual compression. Existing PIC repair methods mainly address the former through selective recomputation, but they incur online computation and cannot recover lost textual details. We propose QV-PIC, a query-aware dual-resolution PIC reuse framework guided by model-native templates. Offline, QV-PIC compiles visual caches under the model's native chat-template prefix, improving PIC quality without online recomputation. Online, it preserves global context with low resolution and restores fine-grained textual evidence within a high-resolution budget by cumulative query relevance scores, retaining the efficiency benefit of visual compression. Across six tasks, QV-PIC improves average F1 by 21.6 points over vanilla rendered-image PIC, closes the gap to vanilla text PIC, and surpasses optimized text PIC by 2.58 F1 while reducing TTFT by 17.2%. Relative to full prefill, it cuts TTFT by 83.8%.