Lithology Classification

Exploration drill targeting in structurally complex terranes is hindered by sparse sampling, heterogeneous datasets, and the ambiguity of geophysical inversions. Here, we present an uncertainty-aware 3D workflow for the acceleration of time-to-discovery in brownfield explorations and apply it to the Kogodai prospect in the Rudny Altai metallogenic province. We jointly analyse existing drilling and geophysical data in a comprehensive approach, revealing hidden patterns in already available data. Drillholes and trenches were desurveyed to a common 3D reference frame, and assays were composited to a consistent spatial support to facilitate joint modelling with geophysical inputs. We develop Bayesian deep-learning models to predict 3D fields of Cu grade together with chargeability and apparent resistivity while quantifying epistemic uncertainty via Monte Carlo sampling. The original contribution of this work is to treat the problem not as pointwise regression between co-located observations, but as joint learning of spatially continuous 3D fields from sparse, heterogeneous exploration evidence. The resulting 3D predictions delineate a principal mineralized trend and several localized candidate zones that coincide with elevated induced polarization (IP) responses, while uncertainty mapping highlights where predictions are robust versus where additional drilling would be most informative. The continuous Cu-grade field can also be thresholded to produce binary prospectivity maps, allowing the sensitivity of target delineation to the chosen cutoff to be evaluated. The outputs are intended for qualitative interpretation and risk-aware drill targeting rather than resource estimation, and we discuss key limitations arising from incomplete provenance metadata for geophysical products and heterogeneity of historical sampling.

Mineral exploration requires integrating heterogeneous geochemical, geophysical, and geological evidence, yet existing prospectivity systems often provide only opaque scores or heatmaps. We present MineTRACE, a web-based system for evidence-grounded exploration of eight commodities: Cu, Au, Ni, W, Sn, Co, Ta, and Mn. Users can explore prospectivity maps, query locations or regions, inspect supporting evidence, and interact through natural language. A transparent expert tree, informed by geological knowledge and known deposits, combines multi-source evidence into interpretable prospectivity scores. For a new location, the conversational assistant retrieves the score and supporting evidence from the analysis pipeline and presents them in natural language. The scorer achieves spatial AUC values of up to 0.917 across different test scenarios, while end-to-end evaluation assesses query accuracy and response grounding. MineTRACE makes public geoscience data easier to access, interpret, and verify, supporting more efficient and transparent mineral exploration.

Rapid mineral characterization is essential for applications ranging from mineral exploration to industrial ore processing. To this end, Hyperspectral Imaging (HSI) has emerged as a promising sensing modality thanks to its fine spectral resolution, enabling mineral discrimination in both close-range and remote sensing settings. However, the scarcity of publicly available datasets with reliable ground-truth labels hinders the development and evaluation of HSI-based mineral identification methods. We release Minerals in the Wild, a multi-purpose dataset comprising 1,132 rock specimens collected across Europe. For each specimen, we provide an HSI acquisition together with an elemental characterization obtained via an XRF sensor. We define the task of elemental characterization on our dataset and propose a pruning mechanism that removes distant signatures from the USGS dictionary prior to a convex optimization approach for matching HSI pixels with USGS spectral signatures. Finally, we empirically show that our approach outperforms simpler baselines.

Borehole archives commonly contain core tray photographs and corresponding digital log reports, but no native pixel-level crack annotations. We investigate two complementary approaches for extracting defect-spacing information from these archives. First, structured spacing categories recovered from the report text layer provide weak interval-level labels for classification. A DINO encoder trained on unlabeled core crops supplies domain-specific representations, and a manually verified subset is used to identify label inconsistencies. Second, we manually annotate 5,087 extracted core-row images and evaluate fully supervised crack-segmentation models. Our gated U-Net combines PiDiNet edge maps with Mask R-CNN masks through a learned spatial gating mechanism. This configuration achieves an F1 score of 0.860 and a crack-class IoU of 0.754, the highest result among the evaluated segmentation configurations. Deterministic post-processing converts predicted crack locations into defect-spacing categories. Separate rule-based branches estimate core-relative bedding angles and lithological color descriptors; their predictions agree with log-report references on 75.4% and 84.7% of 1,200 evaluated images, respectively. Because these references are extracted from existing reports, the reported values measure agreement with recorded geological observations rather than independent physical accuracy. The resulting framework combines report-derived weak supervision for spacing classification with fully supervised segmentation for image-based crack localization.

Accurate geological characterization of subsurface reservoirs from well log data is essential to support projects such as carbon capture and storage (CCS), geothermal development, and extraction of natural resources. Existing automated techniques for geological characterization primarily use sliding-window classification, which limits their ability to understand broader geological contexts, often leading to misaligned formation layers. To overcome these limitations, we introduce LithoFormer, a robust framework for stratigraphic inference using a Seq2Seq transformer model that ingests entire multivariate well logs in a single pass. The framework utilizes a channel-independent PatchTST backbone enhanced with rotary positional embeddings (RoPE) to capture long-range geological dependencies across entire multivariate well logs. A decoupled multi-task head is employed to jointly predict geological zonation and precise boundary probabilities, while a geology-informed loss function enforces physical constraints such as the Law of Superposition. Validated and deployed on three real-world datasets, LithoFormer demonstrates a 90% reduction in median boundary error and eliminates stratigraphic order violations compared to traditional sliding-window baselines. It also achieves a 80% reduction in manual expert labor and eliminates stratigraphic inconsistencies, providing a scalable and reliable solution for large-scale subsurface modeling.

The renewed global focus on lunar exploration, driven by the prospect of in-situ resource utilization and a sustained human presence on the Moon, has created growing demand for accurate, large-scale characterization of the lunar surface. Although vast quantities of orbital remote-sensing data have been collected, scientific analysis and resource mapping remain fragmented by heterogeneous multiinstrument observations, sparse labels, and bespoke task-specific modelling workflows. Here we introduce LunarFM, a multimodal foundation model that learns a general representation of the lunar surface from diverse orbital measurements. LunarFM assimilates observations from six instruments across three lunar missions, mapping 18 input channels to a shared embedding space. We demonstrate that this embedding space supports a diverse range of downstream applications, including similarity search, few-shot resource mapping, mineral abundance regression, and geological unit classification, enabling efficient scientific investigation and resource-oriented analysis. We provide a machine-learning-ready dataset of co-registered multimodal observations spanning latitudes from 70°S to 70°N, a pretrained multimodal masked autoencoder, and a companion embedding dataset providing a joint 768-dimensional representation of lunar surface properties. All code and data are available at https://lunarfm.trillium.tech/

This study presents a conditional Generative Adversarial Network (cGAN) framework for generating 3D porous media volumes with controlled porosity, trained exclusively on 2D thin section images. The key innovation lies in combining property-conditioned generation with 2D-to-3D reconstruction, eliminating the need for expensive 3D training data while maintaining control over petrophysical properties. The framework employs a hybrid architecture with a 3D generator and 2D discriminator, where multi-axis slice extraction enables learning 3D-consistent structures from 2D training data. Porosity labels are extracted using an Enhanced U-Net segmentation model. The methodology was demonstrated on two carbonate samples with different lithologies: dolomite-anhydrite and pure dolomite. Results show that the framework successfully generates realistic 3D volumes capturing lithological features such as anhydrite inclusions and fine crystalline textures. Porosity control achieved an $R^2$ of 0.93, with mean absolute errors of 0.019 and 0.010 for the heterogeneous and homogeneous samples, respectively.

Mineral prospectivity modelling (MPM) underpins exploration economics, yet most operational pipelines reduce to data-driven classifiers trained on shallow surface proxies. Such models are blind to the subsurface physics that actually localises ore: heat advection, fluid flow, and lithology-dependent precipitation. We present Korzhinskii-Net, a 2-D radial physics-informed neural network (PINN) that couples Darcy flow, advective-diffusive heat transport, and a softplus-saturated reaction rate into a single differentiable forward model, weakly supervised by surface and remote-sensing proxies. The network is named after Dmitri S. Korzhinskii (1899-1985), whose theory of infiltration metasomatism provides the physical scaffold. We evaluate Korzhinskii-Net on six ore provinces spanning three commodity classes - Udokan (sandstone-hosted Cu), Sukhoi Log, Olimpiada, and Berezovskoye (orogenic Au), Vorontsovskoye (Carlin-type Au), and Dalnegorsk (skarn polymetallic) - under a fair, leakage-controlled 5-fold cross-validation protocol with hard ring-shaped negatives and baseline proxy features disabled. Korzhinskii-Net attains a mean PR-AUC of 0.708 versus 0.235 for the strongest classical baseline (support vector machine), and a mean fractional rank of 0.036 versus 0.475. The improvement is consistent across all six provinces and three commodity systems, suggesting that physics-informed differentiable simulators, even when constrained only by global open-data proxies, can recover localisation patterns that pure feature-based learners systematically miss. We release the full pipeline and evaluation harness as open source.

In semiconductor manufacturing, lithography projects circuit layouts onto silicon wafers through an optical mask. As circuit features shrink below the wavelength of light, optical diffraction causes the printed patterns to deviate from their intended layouts. Inverse Lithography Technology (ILT) addresses this challenge by generating optimized masks that enhance the fidelity of pattern transfer onto wafers. While ILT resembles an image synthesis task, its reliance on explicit physical metrics for mask evaluation limits the applicability of existing generative models. We introduce LithoGRPO, an ILT framework that integrates the flow-matching paradigm with GRPO-based reinforcement learning (RL) fine-tuning, enabling efficient exploration of diverse masks for a given target layout. Unlike purely generative or optimization-based approaches, RL in LithoGRPO exploits the explicitly defined, physics-based reward function of ILT, enabling optimization under complex, process-aware constraints. To the best of our knowledge, this is the first framework that unifies flow matching and RL for mask optimization. To improve RL sampling efficiency, we propose a fast shot-counting algorithm for manufacturability evaluation, achieving over 130x speedup while preserving the mask ranking of the traditional shot-count metric. Extensive experiments demonstrate that LithoGRPO achieves state-of-the-art performance over both optimization-based and learning-based methods, while maintaining efficient mask generation.

Automatically mapping and segmenting global mining footprints using remote sensing and deep learning is critical for monitoring the socio-environmental risks and impacts of mining, yet its progress is hindered by the scarcity of fine-grained annotated data. Although large-scale datasets with coarse boundaries are widely available, leveraging them to improve fine-grained segmentation is challenging due to significant domain shift. To address this, we propose MineC2FNet, a coarse-to-fine domain incremental learning framework that exploits abundant coarse data to enhance fine-grained mining footprint segmentation. MineC2FNet adopts a teacher-student architecture with attentive distillation at both the feature and prediction levels, selectively transferring generalized knowledge from the coarse domain while enabling boundary refinement using limited fine-grained data (fine domain). We further introduce an expertly validated dataset of 219 images with precise boundary annotations across diverse geographies and commodities. Extensive experiments against state-of-the-art approaches, including domain adaptation and domain incremental learning methods, demonstrate that MineC2FNet achieves superior performance while effectively handling domain shift. The dataset and code are publicly available at https://github.com/risqiutama/MineC2FNet.

The grading of gemstones is currently a manual procedure performed by gemologists. A popular approach uses reference stones, where those are visually inspected by specialists that decide which one of the available reference stone is the most similar to the inspected stone. This procedure is very subjective as different specialists may end up with different grading choices. This work proposes a complete framework that entails the image acquisition and goes up to the final stone categorization. The proposal is able to automate the entire process apart from including the stone in the created chamber for the image acquisition. It discards the subjective decisions made by specialists. This is the first work to propose a machine learning approach coupled with image processing techniques for emerald grading. The proposed framework achieves 98% of accuracy (correctly categorized stones), outperforming a deep learning approach. Furthermore, we also create and publish the used dataset that contains 192 images of emerald stones along with their extracted and pre-processed features.

A lightweight and reproducible denoising pipeline for high-throughput Raman spectroscopy is presented. The approach relies on a one-dimensional convolutional autoencoder trained using a Noise2Noise strategy, requiring neither external spectral libraries nor high signal-to-noise reference spectra for training. From a reduced training subset composed of repeated short-exposure acquisitions, the model learns to reconstruct Raman spectra while efficiently suppressing stochastic noise. The method is evaluated on a heterogeneous mineral sample, using both quantitative spectral fidelity metrics (RMSE, SNR, SSIM) and task-oriented criteria based on unsupervised K-means classification. Results demonstrate that integration times as short as 5 ms per spectrum, which are typically insufficient for reliable interpretation, yield denoised spectra with high fidelity to the reference data while preserving chemically coherent maps. This work provides a practical trade-off between spectral quality and acquisition speed, enabling fast, adaptable Raman workflows compatible with routine laboratory use. It also offers a transferable framework for other one-dimensional spectroscopic modalities.

History matching is a central inverse problem in reservoir engineering, where uncertain reservoir parameters must be calibrated against observations. Although automated history matching can reduce manual effort, practical deployment remains difficult because engineers must still configure heterogeneous workflows involving parameter selection, physically admissible bounds, optimizer choice, hyperparameter tuning, simulator execution, and diagnostic reporting. We propose PetroGraph, a multi-agent framework for intelligent reservoir history matching that decomposes this workflow into specialized agents for model review, experimental planning, parameterization, optimization, simulation, and summarization. The system combines large language model agents with domain-specific tools, retrieval-augmented access to simulator documentation, validation of modified ECLIPSE input decks, human-in-the-loop checkpoints, and an OPM Flow-based simulation backend. This design enables users to initiate and steer history matching through natural language while preserving explicit control over selected parameters and optimization settings. We evaluate PetroGraph on three reservoir models of increasing complexity: the synthetic SPE1 model, the faulted SPE9 benchmark, and the real-field Norne model. Using weighted normalized root mean square error as the objective, PetroGraph reduces the mismatch by 95% on SPE1, 69% on SPE9, and 13% on Norne. These results demonstrate that multi-agent orchestration can automate key decisions in history matching, lower the expertise barrier for operating complex simulation workflows, and provide a flexible foundation for extensible, domain-aware reservoir model adaptation.

Remote sensing lithology interpretation is fundamental to geological surveys, mineral exploration, and regional geological mapping. Unlike general land-cover recognition, lithology interpretation is a knowledge-intensive task that requires experts to infer rock types from various features, e.g., subtle visual, spectral, textural, geomorphological, and contextual cues, making reliable automated interpretation highly challenging. Geological knowledge-guided large multimodal models offer new opportunities, yet their evaluation remains constrained by the lack of benchmarks that capture lithological annotations, multi-level geological semantics, and expert-informed assessment. Here, we propose LithoBench, a multi-level benchmark for evaluating geological semantic understanding in remote sensing lithology interpretation. LithoBench contains 10,000 expert-annotated interpretation instances across 12 representative lithological categories, including 4,000 multiple-choice and 6,000 open-ended tasks organized into five cognitive levels: Identification and Description, Comparative Analysis, Mechanism Explanation, Practical Application, and Comprehensive Reasoning. We further develop an expert-in-the-loop, knowledge-grounded semi-automated construction pipeline, coupling multi sub-processes, e.g., structured geological image descriptions, to enhance geological validity and evaluation reliability. Experiments with multiple large vision-language models eveal substantial limitations in geological semantic understanding, particularly on higher-order explanation, application, and reasoning tasks.

Lithology classification aims to infer subsurface rock types from well-logging signals, supporting downstream applications like reservoir characterization. Despite substantial progress, most existing methods still treat lithology classification as a single-pass classification task. In contrast, practical experts incorporate geological principles, external knowledge, and tool-use capabilities to perform accurate classification. In this work, we propose GeoDecider, a coarse-to-fine agentic workflow that enables accurate and explainable lithology classification through training-free use of large language models (LLMs). GeoDecider reformulates lithology classification as an expert-like structured process and organizes it into a multi-stage workflow involving coarse-to-fine reasoning. Specifically, GeoDecider includes the following stages: (1) base classifier-guided coarse classification, which uses a pre-trained classifier to provide a rough reference for downstream tasks, thus reducing the overall cost of downstream reasoning, (2) tool-augmented reasoning, which utilizes several tools such as contextual analysis and neighbor retrieval to achieve finer and more precise classifications, (3) geological refinement, which post-processes the final results to enforce geological consistency. Experiments on four benchmarks show that GeoDecider outperforms representative baselines. Further analysis demonstrates that the proposed framework produces geologically interpretable predictions while achieving a better trade-off between classification performance and inference efficiency.

Lithology classification in well logs is a fundamental geoscience data mining task that aims to infer rock types from multi dimensional geophysical sequences. Despite recent progress, existing approaches typically formulate the problem as a static, single-step discriminative mapping. This static paradigm limits evidence-based diagnostic reasoning against geological standards, often yielding predictions that are detached from geological reality due to a lack of domain priors. In this work, we propose GeoMind, a tool-augmented agentic framework that models lithology classification as a sequential reasoning process. GeoMind organizes its toolkit into perception, reasoning, and analysis modules, which respectively translate raw logs into semantic trends, infer lithology hypotheses from multi-source evidence, and verify predictions against stratigraphic constraints. A global planner adaptively coordinates these modules based on input characteristics, enabling geologically plausible and evidence-grounded decisions. To guarantee the logical consistency of GeoMind, we introduce a fine-grained process supervision strategy. Unlike standard methods that focus solely on final outcomes, our approach optimizes intermediate reasoning steps, ensuring the validity of decision trajectories and alignment to geological constraints. Experiments on four benchmark well-log datasets demonstrate that GeoMind consistently outperforms strong baselines in classification performance while providing transparent and traceable decision-making processes.

Grain-edge segmentation (GES) and lithology semantic segmentation (LSS) are two pivotal tasks for quantifying rock fabric and composition. However, these two tasks are often treated separately, and the segmentation quality is implausible albeit expensive, time-consuming, and expert-annotated datasets have been used. Recently, foundation models, especially the Segment Anything Model (SAM), have demonstrated impressive robustness for boundary alignment. However, directly adapting SAM to joint GES and LSS is nontrivial due to 1) severe domain gap induced by extinction-dependent color variations and ultra-fine grain boundaries, and 2) lacking novel modules for joint learning on multi-angle petrographic image stacks. In this paper, we propose Petro-SAM, a novel two-stage, multi-task framework that can achieve high-quality joint GES and LSS on petrographic images. Specifically, based on SAM, we introduce a Merge Block to integrate seven polarized views, effectively solving the extinction issue. Moreover, we introduce multi-scale feature fusion and color-entropy priors to refine the detection.

Carbonate reservoirs offer significant capacity for subsurface carbon storage, oil production, and underground hydrogen storage. X-ray computed tomography (X-ray CT) coupled with numerical simulations is commonly used to investigate the multiphase flow behaviors in carbonate rocks. Carbonates exhibit pore size distribution across scales, hindering the comprehensive investigation with conventional X-ray CT images. Imaging samples at both macro and micro-scales (multi-scale imaging) proved to be a viable option in this context. However, multi-scale imaging faces two key limitations: the trade-off between field of view and voxel size necessitates resource-intensive imaging, while multi-scale multi-physics numerical simulations on resulting digital models incur prohibitive computational costs. To address these challenges, we propose a machine learning-enhanced data assimilation framework that leverages experimental drainage relative permeability measurements to achieve efficient characterization of micro-scale structures, delivering a data-driven solution toward a high-fidelity multiscale digital rock modeling. We train a dense neural network (DNN) as a proxy to a multi-scale pore network simulator and couple it with an ensemble smoother with multiple data assimilation (ESMDA) algorithm. DNN-ESMDA framework simultaneously infers the CO2-brine drainage relative permeability of microporosity phases with associated uncertainty estimation, revealing the relative importance of each rock phase and guiding future characterization. Our DNN-ESMDA framework achieves a computational speedup, reducing inference time from thousands of hours to seconds compared with the usage of conventional multiscale numerical simulation. Given this computational efficiency and applicability, the machine learning-enhanced ESMDA framework presents a generalizable approach for characterizing multiscale carbonate rocks.

Obtaining truly representative pore-scale images that match bulk formation properties remains a fundamental challenge in subsurface characterization, as natural spatial heterogeneity causes extracted sub-images to deviate significantly from core-measured values. This challenge is compounded by data scarcity, where physical samples are only available at sparse well locations. This study presents a multi-conditional Generative Adversarial Network (cGAN) framework that generates representative pore-scale images with precisely controlled properties. The framework was trained on thin section samples from four depths (1879.50-1943.50 m) of a carbonate formation, simultaneously conditioning on porosity and depth within a single model. It processes RGB thin section images that preserve critical mineralogical information (anhydrite-dolomite differentiation, grain boundaries, porosity distinctions) lost in conventional grayscale representations, capturing characteristics from grainstone fabrics to crystalline textures with anhydrite inclusions. The model achieved strong porosity control (R^2 = 0.95) across all formations with mean absolute errors of 0.0099-0.0197. Morphological validation confirmed preservation of average pore radius, specific surface area, and tortuosity within acceptable tolerances. Two-point correlation (S2) analysis confirmed that generated images preserve the spatial continuity and characteristic length scales of natural pore networks, with results consistent across the imaging resolutions tested (1.8-3.0 micron/pixel). Validated against core sample properties, generated images showed higher property fidelity with dual-constraint errors of 1.9-12.4% compared to 37.5-713.6% for randomly extracted real sub-images. This capability provides practical tools for subsurface characterization, particularly valuable for carbon storage, geothermal energy, and groundwater management.

A key factor for lunar mission planning is the ability to assess the local availability of raw materials. However, many potentially relevant measurements are scattered across a variety of scientific publications. In this paper we consider the viability of obtaining lunar composition data by leveraging LLMs to rapidly process a corpus of scientific publications. While leveraging LLMs to obtain knowledge from scientific documents is not new, this particular application presents interesting challenges due to the heterogeneity of lunar samples and the nuances involved in their characterization. Accuracy and uncertainty quantification are particularly crucial since many materials properties can be sensitive to small variations in composition. Our findings indicate that off-the-shelf LLMs are generally effective at extracting data from tables commonly found in these documents. However, there remains opportunity to further refine the data we extract in this initial approach; in particular, to capture fine-grained mineralogy information and to improve performance on more subtle/complex pieces of information.