Medical LLMs

LLM: Large Language Model

Overview

Medical large language models are studied for tasks such as diagnosis, clinical coding, note summarization, triage, and patient communication. Common approaches include clinical pretraining and fine-tuning, retrieval-augmented generation with guidelines or knowledge graphs, tool-using agents, and multimodal models that combine text with images or structured records. Evaluation ranges from question-answering benchmarks to realistic consultations, EHR workflows, and clinician studies, with growing attention to calibration, privacy, bias, and evidence grounding. A central challenge is that strong scores on fixed tests do not ensure reliable behavior with incomplete or changing information, misleading patient input, or high-stakes decisions, so human oversight and real-world validation remain important.

Latest papers

402 papers40 papers in the last four weeks, up 29% on the four weeks before. 0.2% of all new papers.

Nov 4, 2025

AyurParam: A State-of-the-Art Bilingual Language Model for Ayurveda

Current large language models excel at broad, general-purpose tasks, but consistently underperform when exposed to highly specialized domains that require deep cultural, linguistic, and subject-matter expertise. In particular, traditional medical systems such as Ayurveda embody centuries of nuanced textual and clinical knowledge that mainstream LLMs fail to accurately interpret or apply. We introduce AyurParam-2.9B, a domain-specialized, bilingual language model fine-tuned from Param-1-2.9B using an extensive, expertly curated Ayurveda dataset spanning classical texts and clinical guidance. AyurParam's dataset incorporates context-aware, reasoning, and objective-style Q&A in both English and Hindi, with rigorous annotation protocols for factual precision and instructional clarity. Benchmarked on BhashaBench-Ayur, AyurParam not only surpasses all open-source instruction-tuned models in its size class (1.5--3B parameters), but also demonstrates competitive or superior performance compared to much larger models. The results from AyurParam highlight the necessity for authentic domain adaptation and high-quality supervision in delivering reliable, culturally congruent AI for specialized medical knowledge.
Nov 1, 2025

MedRECT: A Bilingual Medical Reasoning Benchmark for Error Correction in Clinical Texts

Large language models (LLMs) show promise in medical applications, but their ability to detect and correct errors in clinical texts remains under-evaluated, particularly beyond English. We introduce MedRECT, a bilingual benchmark for Japanese and English that formulates medical error handling as three subtasks: error detection, error sentence extraction, and error correction. MedRECT-ja contains 663 samples derived from the Japanese Medical Licensing Examinations, while the separately sourced MedRECT-en contains 458 samples curated from MEDEC. We evaluate 11 LLMs across 17 configurations that cover proprietary and open-weight models, medical-domain specialization, and multiple reasoning settings. Qwen3-32B scores higher in its thinking mode than in its non-thinking mode on error detection F1 and sentence extraction accuracy in both subsets, with sentence extraction accuracy higher by 24.5 percentage points on MedRECT-ja and 10.3 on MedRECT-en. Several leading general-purpose reasoning models outperform all three evaluated medical-domain models on these two subtasks. Most models have lower point estimates on the Japanese subset, although absolute scores are not directly comparable because the subsets differ in source material and error distributions. LoRA fine-tuning yields higher sentence extraction accuracy and higher point estimates on all three reference-based correction similarity metrics in both languages. MedRECT provides an open, reusable evaluation resource for studying medical error correction and reasoning across Japanese and English. Our dataset and code are available at https://github.com/pfnet-research/medrect.
Sep 25, 2025

Expert-guided Clinical Text Augmentation via Query-Based Model Collaboration

Data augmentation is a widely used strategy to improve model robustness and generalization by enriching training datasets with synthetic examples. While large language models (LLMs) have demonstrated strong generative capabilities for this purpose, their applications in high-stakes domains like healthcare present unique challenges due to the risk of generating clinically incorrect or misleading information. In this work, we propose a novel query-based model collaboration framework that integrates expert-level domain knowledge to guide the augmentation process to preserve critical medical information. Compared to existing LLM-based and traditional augmentation methods, our generated data significantly improves preservation of critical medical information and reduces hallucinations at both the token and concept levels. Experiments on downstream clinical prediction tasks demonstrate consistent performance gains over existing augmentation methods. This lightweight collaborative framework addresses the gap between LLM augmentation potential and the safety requirements of specialized domains.
Aug 31, 2025

RPRO: Ranked Preference Reinforcement Optimization for Enhancing Medical QA and Diagnostic Reasoning

Medical question answering requires advanced reasoning that integrates domain knowledge with logical inference. However, existing large language models (LLMs) often generate reasoning chains that lack factual accuracy and clinical reliability. We propose Ranked Preference Reinforcement Optimization (RPRO), a novel framework that combines reinforcement learning with preference-driven reasoning refinement to enhance clinical chain-of-thought (CoT) performance. RPRO distinguishes itself from prior approaches by employing task-adaptive reasoning templates and a probabilistic evaluation mechanism that aligns model outputs with established clinical workflows, while automatically identifying and correcting low-quality reasoning chains. Unlike traditional pairwise preference methods, RPRO introduces a groupwise ranking optimization based on the Bradley--Terry model and incorporates KL-divergence regularization for stable training. Experiments on PubMedQA, MedQA-USMLE, and a real-world clinical dataset from Far Eastern Memorial Hospital (FEMH) demonstrate consistent improvements over strong baselines. Remarkably, our 2B-parameter model outperforms much larger 7B--20B models, including medical-specialized variants. These findings demonstrate that combining preference optimization with quality-driven refinement provides a scalable and clinically grounded approach to building more reliable medical LLMs.
Aug 19, 2025

ProMed: Shapley Information Gain Guided Reinforcement Learning for Proactive Medical LLMs

Interactive medical questioning is essential in clinical consultations, where physicians must actively gather necessary patient information. Yet existing medical Large Language Models (LLMs) predominantly follow a reactive paradigm, risking diagnostic errors by answering before seeking sufficient details. To bridge this gap, we propose ProMed, a reinforcement learning framework that transitions LLMs toward a proactive paradigm, enabling them to ask clinically valuable questions before decision-making. Central to ProMed is the Shapley Information Gain (SIG) reward, which quantifies a question's clinical utility as the amount of newly acquired information, while considering its contextual importance via Shapley values. We integrate SIG into a two-stage training pipeline: (1) SIG-Guided Model Initialization uses Monte Carlo Tree Search to construct high-reward interaction trajectories for supervision, and (2) SIG-Augmented Policy Optimization, with a novel SIG-guided Reward Distribution Mechanism that prioritizes informative questions for fine-grained optimization. Experiments on partial-information medical benchmarks show that ProMed significantly outperforms state-of-the-art methods by 6.29% on average and delivers a 54.45% gain over the reactive paradigm, and generalizes robustly to out-of-domain cases. Our codes are available at https://github.com/hxxding/ProMed.
Aug 7, 2025

FedCoT: Communication-Efficient Federated Reasoning Enhancement for Large Language Models

Enhancing LLM reasoning in federated settings is nontrivial due to stringent computational, communication, and privacy constraints, especially in healthcare, where clinically consequential decisions require not only accuracy but also interpretable, auditable rationales to meet safety, accountability, and regulatory requirements. Conventional federated fine-tuning largely imitates final answers rather than cultivating step-by-step reasoning, often relying on privacy-sensitive centralized distillation and still incurring substantial communication overhead. We address this gap with \ours{}, a federated reasoning framework that combines lightweight chain-of-thought resampling with a compact discriminator for selection, and client-aware LoRA stacking with weighted classifier aggregation to accommodate heterogeneity while reducing aggregation noise and communication; clients generate candidate chains and supervision locally, and only lightweight modules are aggregated on the server. Experiments on medical reasoning benchmarks show consistent gains under tight resource budgets while keeping data local and respecting privacy, offering an interpretable and resource-efficient solution. Our code is made publicly available at https://github.com/DIaacKr/FedCoT
Aug 1, 2025

Medical Reasoning in the Era of LLMs: A Systematic Review of Enhancement Techniques and Applications

The proliferation of Large Language Models (LLMs) in medicine has enabled impressive capabilities, yet a critical gap remains in their ability to perform systematic, transparent, and verifiable reasoning, a cornerstone of clinical practice. This has catalyzed a shift from single-step answer generation to the development of LLMs explicitly designed for medical reasoning. This paper provides the first systematic review of this emerging field. We propose a taxonomy of reasoning enhancement techniques, categorized into training-time strategies (e.g., supervised fine-tuning, reinforcement learning) and test-time mechanisms (e.g., prompt engineering, multi-agent systems). We analyze how these techniques are applied across different data modalities (text, image, code) and in key clinical applications such as diagnosis, education, and treatment planning. Furthermore, we survey the evolution of evaluation benchmarks from simple accuracy metrics to sophisticated assessments of reasoning quality and visual interpretability. Based on an analysis of 60 seminal studies from 2022-2025, we conclude by identifying critical challenges, including the faithfulness-plausibility gap and the need for native multimodal reasoning, and outlining future directions toward building efficient, robust, and sociotechnically responsible medical AI.
Jul 30, 2025

Addressing Benchmarking Gaps in Large Language Models for Health and Medicine with Dynamic Red-Teaming

Large language models (LLMs) are increasingly used to answer health-related questions and support healthcare workflows, yet evidence for their safety still relies heavily on static benchmarks that can rapidly become obsolete or be optimized against. Here we introduce a Dynamic, Automatic, and Systematic (DAS) red-teaming audit framework that continuously stress-tests LLMs for health across four safety-critical axes: robustness, privacy, bias/fairness, and hallucination/factual inaccuracies. Validated against board-certified clinicians with high concordance, a suite of adversarial agents autonomously mutates health-related test cases to uncover vulnerabilities in real time. Applying DAS to 15 proprietary and open-source LLMs revealed a profound gap between high static benchmark performance and low dynamic reliability--the "Benchmarking Gap". Despite median MedQA accuracy exceeding 80%, 94% of previously correct answers failed under dynamic robustness testing. This brittleness generalized to the realistic, open-ended HealthBench dataset, where top-tier models exhibited failure rates exceeding 70% and sharp shifts in model rankings across evaluations, suggesting that high scores on established static benchmarks may reflect superficial memorization. We observed similarly high failure rates across other domains: privacy leaks were elicited in 86% of scenarios, cognitive-bias priming altered recommendations in 81% of fairness tests, and hallucination rates exceeded 74% in widely used models. By converting LLM safety evaluation for health from a static checklist into a living adversarial audit, DAS provides a scalable framework for surfacing latent risks before such systems are deployed in consumer-facing health assistants, clinician-facing tools, and broader healthcare workflows. Code is available at https://github.com/JZPeterPan/DAS-Medical-Red-Teaming-Agents.
Apr 11, 2025

MedHal: a Synthetic Dataset for Medical Hallucination Detection

Hallucination, the generation of non factual content by AI systems, poses serious risks in medical contexts, where errors can directly affect patient outcomes. We present MedHal, a large-scale dataset specifically designed to assess capabilities and train models on the task of hallucination detection in medical texts. Current hallucination detection methods face significant limitations when applied to specialized domains like medicine, where they can have disastrous consequences. MedHal addresses this issue by incorporating diverse medical text sources and tasks covering both intrinsic and extrinsic hallucinations, and by providing a substantial volume of data samples suitable for training medical hallucination detection models. We demonstrate MedHal's utility by training and evaluating a baseline medical hallucination detection model, showing improvements over general-purpose hallucination detection approaches. This resource enables more efficient evaluation and training of medical text generation systems while reducing reliance on costly expert review, potentially accelerating the development of medical AI research.
Feb 4, 2025

Open Foundation Models in Healthcare: Challenges, Paradoxes, and Opportunities with GenAI Driven Personalized Prescription

In response to the success of proprietary Large Language Models (LLMs), there is a growing interest in developing open, non-proprietary LLMs and AI foundation models (AIFMs) for transparent use in academic, scientific, and non-commercial applications. Open models have substantial potential to improve healthcare applications. In this paper, we provide a comprehensive survey and a taxonomy of state-of-the-art open LLMs and AIFMs for clinical tasks. In addition, we empirically evaluate open-weight LLMs on a personalized-prescription task and compare them with a proprietary model with and without Retrieval-Augmented Generation (RAG). Across 100 synthetic patient profiles, the open-weight models matched or exceeded the proprietary baseline on overall suitability accuracy without retrieval augmentation (0.810--0.850 versus 0.780), although the confidence intervals overlap; with retrieval augmentation, every model improved, and the ranking closed to within 0.04. Gains from RAG were field-dependent rather than uniform. To highlight the clinical relevance of LLM-driven personalized prescriptions, we also conduct a subjective evaluation in which two raters, blinded to model and condition, scored responses independently of each other. Their ratings did not follow the accuracy gains: retrieval raised overall suitability accuracy for every model while lowering the two-rater means for two of the four on all five dimensions. Finally, we outline the ethical implications and potential risks associated with the misuse of advanced LLMs and AIFMs, highlighting the importance of responsible and transparent deployment in healthcare contexts. \textit{Data and code used in the paper will be released upon publication.
Dec 20, 2024

Learning Personalized Prompts for Healthcare Guidance

The rapid development of large language models (LLMs) has transformed many industries, including healthcare. In practice, hospitals and patients increasingly seek LLM-based systems capable of interpreting personal health records and providing healthcare guidance. However, existing approaches mainly rely on general medical knowledge and often fail to account for individual variability, limiting their ability to provide personalized guidance. To address this, we propose personalized prompt learning (PPL), a framework that learns individualized prompts to guide LLMs in generating personalized healthcare recommendations. PPL constructs initial personalized prompts by leveraging both self-informed patient information and peer-informed signals derived from clinically similar cases. These prompts are then refined using reinforcement learning (RL) to better align the generated responses with physician recommendations written for each patient. PPL operates with hard prompts, enabling seamless integration with proprietary LLMs without modifying the underlying models. We evaluate PPL on real-world obstetrics and gynecology data. The results show that our approach produces more personalized healthcare guidance and wins 97 out of 100 comparisons in expert evaluation, demonstrating its potential for broader healthcare applications. Our code is publicly available at https://github.com/CGCL-codes/PPL.
Mar 18, 2024

Narrative Feature or Structured Feature? A Study of Large Language Models to Identify Cancer Patients at Risk of Heart Failure

Cancer treatments are known to introduce cardiotoxicity, negatively impacting outcomes and survivorship. Identifying cancer patients at risk of heart failure (HF) is critical to improving cancer treatment outcomes and safety. This study examined machine learning (ML) models to identify cancer patients at risk of HF using electronic health records (EHRs), including traditional ML, Time-Aware long short-term memory (T-LSTM), and large language models (LLMs) using novel narrative features derived from the structured medical codes. We identified a cancer cohort of 12,806 patients from the University of Florida Health, diagnosed with lung, breast, and colorectal cancers, among which 1,602 individuals developed HF after cancer. The LLM, GatorTron-3.9B, achieved the best F1 scores, outperforming the traditional support vector machines by 39%, the T-LSTM deep learning model by 7%, and a widely used transformer model, BERT, by 5.6%. The analysis shows that the proposed narrative features remarkably increased feature density and improved performance.