Multi-Omics Data Integration

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23 papers3 papers in the last four weeks, against 1 the four weeks before. 0.0% of all new papers.

  1. Synthesis of Ovarian Cancer Multi-Omics Datasets: A Biology-Informed Evaluation Framework

    Nov 5, 2026Déborah Boyenval, Alina Malyutina, Jaana Oikkonen +2Synthetic Data GenerationSynthetic Data Evaluation

    Research Program in Systems Oncology, Research Programs Unit, Faculty of Medicine, University of Helsinki, Helsinki, Finland · Orion Pharma, Espoo, Finland · PalsaIQ, Finland

  2. MUSS: A Multi-scale and Sequence-based Model for Single-cell Gene Regulation

    Nov 5, 2026Kangjie Zheng, Amirhossein Vahidi, Liying Jin +7GenomicsSingle-Cell Transcriptomics

    Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, UK · Cambridge Centre for AI in Medicine, University of Cambridge, Cambridge, UK · Cambridge University Hospitals Foundation Trust, Addenbrooke’s Hospital, Cambridge, UK +5

  3. ILR-SMO: Iterative Latent Refinement for Robust Spatial Multi-Omics Integration

    Nov 2, 2026Anqi Yu, Xudong Xu, Jianzhi Lu +5Multi-Omics Data IntegrationReliability-Aware Multimodal Fusion

    College of Computer Science and Artificial Intelligence, Shanghai Key Laboratory of Intelligent Information Processing, Fudan University, Shanghai 200438, China

  4. scAnyOmics: Foundation-Model Distillation for Any-to-Any Completion of Multi-omics Virtual Cells

    Oct 30, 2026Zhaoqi Song, Ye Du, Yusuke Iwasawa +2Multi-Omics Data IntegrationIncomplete Data Imputation

    Department of Technology Management for Innovation, Graduate School of Engineering, The University of Tokyo, Tokyo, 113-8656, Japan · State Key Laboratory of Cellular Stress Biology, School of Life Sciences, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen, 361102, China · Department of Computing, Hong Kong Polytechnic University, Hong Kong S.A.R., China

  5. BASILISC: Bayesian Alignment of Siamese-Integrated Latents for Inferring Single-cell Correspondence

    Oct 28, 2026Sepideh Saran, Mahsa Ghanbari, Uwe OhlerCross-Modal AlignmentMulti-Omics Data Integration

    The Berlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine, Germany · Department of Electrical Engineering and Computer Science, Technical University of Berlin, Germany · Department of Biology, Humboldt University of Berlin, Germany +1

  6. ARO: Aligned Representation learning for multi-Omics data

    Oct 5, 2026Amogh Singh, Yash Shah, Chiara D'Ercoli +4Missing-Modality LearningLearning with Missing Data

    Department of Computer Science, University of Cambridge, Cambridge, UK · DIAG, University of Rome “Sapienza”, Rome, Italy · Max Planck Institute for Intelligent Systems

  7. Evaluating Single and Multi-Omics Based Explainable Artificial Intelligence (MOXAI) for Molecular Subclass Classification of Adult-Type Diffuse Gliomas

    Sep 26, 2026Md Zahangir Alom, Quynh T. Tran, Breuer Alexandar +1Multi-Omics Data IntegrationBrain Tumor Classification

    Department of Pathology, St. Jude Children’s Research Hospital, Memphis, TN 38105 USA.

  8. OmicSync: Reliability-Aware Spatial Multi-Omics Clustering with Evidence-Constrained LLM Reasoning

    Aug 24, 2026Rabeya Tus Sadia, Qiang Ye, Qiang ChengClusteringMulti-Omics Data Integration

    Department of Computer Science, University of Kentucky · Department of Mathematics, University of Kentucky

  9. Learning latent progression states from spatial heterogeneity in uterine histopathology

    Aug 18, 2026Qiming He, Yan Liu, Shuang Ge +20Multi-Omics Data IntegrationComputational Pathology

    Fuzhou University Affiliated Provincial Hospital, Interdisciplinary Institute for Medical Engineering, Fuzhou University, Fuzhou, China

  10. Diagonal Multi-omics Integration of Heterogeneous Datasets

    Aug 17, 2026Maksim V. Kukushkin, Mikhail S. Arbatskiy, Dmitriy E. Balandin +1Multi-Omics Data Integration

    Pirogov Russian National Research Medical University, Russian Clinical and Research Center of Gerontology, Ministry of Health of the Russian Federation, 129226, Moscow, Russia · Russian Academy of Sciences, Kabardino-Balkarian Scientific Center, Institute of Applied Mathematics and Automation, 360000, Nalchik, Russia

  11. DoGMA: A Central-Dogma-Guided Foundation Model for Multi-Omics Alignment and Multi-Task Learning in Oncology

    Aug 8, 2026Junfei Ling, Bangzheng Pu, Bingsen Xue +3Cancer Survival PredictionClinical Outcome Prediction

    Institute of Medical Robotics, Shanghai Jiao Tong University · Institute of Medical Robotics, Shanghai Jiao Tong University, Shanghai 200240, China · Institute of Data Science, The University of Hong Kong +1

  12. Adaptive Confidence-weighted Expansion for Trustworthy Multi-Omics Multimodal Fusion

    Jul 22, 2026Mohammad Raahemi, Ali Sekhavati, Alireza Maleki +1Probability CalibrationUncertainty Quantification

    Faculty of Engineering, University of Ottawa, Ottawa ON K1N 1A2, Canada · RIV Lab, Department of Computer Engineering, Bu-Ali Sina University, Hamedan, Iran · School of Computing and Communications, Lancaster University, Lancaster, UK

  13. LATTICE: Graph Self-Supervised Learning for Multimodal Spatial Omics Integration

    Jul 15, 2026Jagan Mohan Reddy Dwarampudi, Veena Kochat, Suresh Satpati +2Spatial TranscriptomicsGraph SSL

    University of Houston · MD Anderson Cancer Center

  14. Biologically Informed Deep Neural Networks for Multi-Omic Integration, Pathway Activity Inference and Risk Stratification in Cancer

    Jul 6, 2026Pedro Henrique da Costa Avelar, Le Ou-Yang, Min Wu +1Cancer Survival PredictionAutoencoders

    Department of Informatics, King’s College London, London WC2B 4BG, United Kingdom · Institute for Infocomm Research, Agency for Science, Technology and Research (A*STAR), Singapore 138632, Singapore · Division of Informatics, Imaging and Data Science, Faculty of Biology, Medicine and Health, University of Manchester +1

  15. HERO: Hypothesis-Driven Evidence Retrieval from Omics for Multi-Task Breast Cancer Analysis

    Jun 19, 2026Xiangyu Li, Ran SuBreast CancerClinical Outcome Prediction

    College of Intelligence and Computing, Tianjin University, Tianjin 300072, China

  16. Latent World Recovery for Multimodal Learning with Missing Modalities

    Jun 10, 2026Hui Wang, Tianyu Ren, Joseph Butler +3Missing-Modality LearningCross-Modal Alignment

    Queen’s University Belfast, Belfast, United Kingdom

  17. SDM-Q: Cost-Aware Staged Decision-Making for Multi-Omics Classification with Deep Q-Learning

    May 29, 2026Nan Mu, Yangfan Xiao, Ling Wang +3Cost-Sensitive LearningDeep Q-Learning

    College of Computer Science, Sichuan Normal University, Chengdu, Sichuan 610101, China. · Department of Mathematics, College of Science and Mathematics, Kennesaw State University, Kennesaw, GA 30144, USA. · Department of Computer Science, College of Computing and Software Engineering, Kennesaw State University, Marietta, GA 30060, USA.

  18. CellxPert: Inference-Time MCMC Steering of a Multi-Omics Single-Cell Foundation Model for In-Silico Perturbation

    Apr 30, 2026Andac Demir, Erik W. Anderson, Jeremy L. Jenkins +1Single-Cell Perturbation ModelingGenomics

    Novartis Biomedical Research

  19. PathMoG: A Pathway-Centric Modular Graph Neural Network for Multi-Omics Survival Prediction

    Apr 27, 2026Di Wang, Chupei Tang, Junxiao Kong +3Survival AnalysisGraph Neural Networks

    1Cuiying Honors College, Lanzhou University, China · School of Mathematics and Statistics, Lanzhou University, China · School of Mathematics and Statistics, Lanzhou University, China and Shanghai Innovation Institute +1

  20. CMGL: Confidence-guided Multi-omics Graph Learning for Cancer Subtype Classification

    Apr 27, 2026Boyang Fan, Hengchuang Yin, Siyu Yi +5OncologyCancer Subtype Classification

    College of Computer Science, Sichuan University, Chengdu, China · Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi, China · College of Mathematics, Sichuan University, Chengdu, China +1

  21. Genetic algorithms for multi-omic feature selection: a comparative study in cancer survival analysis

    Mar 31, 2026Luca Cattelani, Vittorio FortinoFeature SelectionGenetic Algorithms

    Institute of Biomedicine, School of Medicine, University of Eastern Finland, Yliopistonranta 8, 70210, Finland

  22. DeepDTF: Dual-Branch Transformer Fusion for Multi-Omics Anticancer Drug Response Prediction

    Mar 25, 2026Yuhan Zhao, Jacob Tennant, James Yang +3Multi-Omics Data IntegrationCancer Drug Response Prediction

    Department of Computer Science, North Carolina State University, Raleigh, NC, USA · UNC School of Medicine, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA · Department of Molecular and Structural Biochemistry, North Carolina State University, Raleigh, NC, USA

  23. Heterogeneous Graph Attention Network With Multimodal Feature Selection for Cancer Multiomics Integration

    Aug 5, 2024Sina Tabakhi, Charlotte Vandermeulen, Ian Sudbery +1Multi-Omics Data IntegrationHeterogeneous GNNs

    School of Computer Science, The University of Sheffield, Sheffield, UK · Centre for Machine Intelligence, The University of Sheffield, Sheffield, UK · School of Biosciences, The University of Sheffield, Sheffield, UK