Representation Learning

We introduce 3D-DLP, a self-supervised object-centric representation learning model that decomposes scene-level RGB-D or voxel observations into a set of 3D latent particles. Building on the Deep Latent Particles (DLP) framework, each particle encodes disentangled attributes, including 3D keypoint position, bounding box dimensions, and appearance features, and represents a distinct entity in the scene. The model learns interpretable per-particle segmentation maps through an end-to-end self-supervised reconstruction objective. We demonstrate on both simulated and real-world datasets that the learned latent space is interpretable and controllable: by manipulating particle positions and decoding, we can generate novel scene configurations. Furthermore, we show that leveraging these compact 3D latent particles for downstream robotic manipulation improves performance over baselines that either lack explicit 3D information or rely on memory-intensive dense 3D inputs without object-centric structure. Code and videos are available at https://eubooks3003.github.io/3d-dlp.

Self-supervised speech encoders are predominantly trained by predicting discrete hard cluster IDs at masked positions, a recipe that collapses acoustic ambiguity at category boundaries and requires interrupting training to re-cluster the entire corpus between iterations. We introduce S-JEPA, a JEPA-style encoder-predictor pair trained to match the soft posteriors of a Gaussian Mixture Model at masked positions via KL divergence. Training runs as one continuous optimization trajectory in two phases: a fixed GMM over MFCC features, then an online GMM over encoder features, with the input layer selected adaptively from a label-free signal, removing both the offline re-cluster step and the hand-tuned choice of which transformer layer to cluster on. Under the SUPERB protocol, S-JEPA achieves the lowest WER among evaluated SSL methods below 90M parameters and matches HuBERT-Base on emotion recognition at roughly half its parameter count, establishing a new Pareto frontier without offline re-clustering or teacher distillation. An analysis of the predictor's per-frame entropy on held-out speech reveals a bimodal distribution with a substantial minority of frames near the entropy of a perfect two-cluster tie, providing direct empirical evidence that the soft-target objective preserves the acoustic ambiguity that hard targets would collapse. Code is available at https://github.com/gioannides/s-jepa.

Neuroscientific research has revealed that the brain encodes complex behaviors by leveraging structured, low-dimensional manifolds and dynamically fusing multiple sources of information through adaptive gating mechanisms. Inspired by these principles, we propose a novel reinforcement learning (RL) framework that encourages the disentanglement of dynamics-specific and reward-specific features, drawing direct parallels to how neural circuits separate and integrate information for efficient decision-making. Our approach leverages locally linear embeddings (LLEs) to capture the intrinsic, locally linear structure inherent in many environments, mirroring the local smoothness observed in neural population activity, while concurrently deriving reward-specific features through the standard RL objective. An attention mechanism, analogous to cortical gating, adaptively fuses these complementary representations on a per-state basis. Experimental results on benchmark tasks demonstrate that our method, grounded in neuroscientific principles, improves learning efficiency and overall performance compared to conventional RL approaches, highlighting the benefits of explicitly modeling local state structures and adaptive feature selection as observed in biological systems.

Compositional learning systems must balance plasticity, the ability to acquire new knowledge, with stability, the preservation of previously learned components, especially when tasks share structure and risk interference. We study how modular architecture, task similarity, and representational dimensionality jointly shape compositional continual learning in a sequential A-B-A paradigm, comparing a task-partitioned recurrent network to a single-network baseline while inducing high- and low-dimensional regimes via weight-scale manipulations. In a high-dimensional "lazy" regime, both architectures achieve similar performance and internal geometry, suggesting that explicit modular structure has little impact when representations are weakly constrained. In a lower-dimensional "rich" regime, modularity becomes decisive: the modular network develops graded task-specific subspaces that overlap for similar tasks, partially align for moderately dissimilar tasks, and separate for dissimilar tasks, yielding a more compositional and interpretable organization than the single network. These findings identify the representational regime induced by initialization scale, which co-varies with representational dimensionality, as a key factor governing when compositional, modular structure is functionally beneficial in continual learning, and support viewing safety and robustness as problems of adaptive allocation of representational subspaces rather than fixed separation versus sharing.

Multi-task table recognition jointly addresses table structure prediction, cell localization, and cell content recognition within a unified framework. Existing approaches often rely on autoregressive decoders to generate table structures and reuse their hidden states for cell localization and content recognition. This autoregressive generation process can make cell representations order-dependent, degrading global consistency across cells. This paper proposes a structural refinement module that produces order-independent cell features through non-causal attention. This design enables parallel inference of cell contents while conditioning each cell on global context encoded in the refined features. Experiments on two large datasets demonstrate consistent gains in cell localization and end-to-end recognition, while reducing overall inference time by around threefold.

Food manufacturing requires reliable inspection systems to detect foreign material contamination and maintain product safety. Sub-THz transmission imaging provides material-dependent attenuation characteristics that are useful for detecting low-density contaminants in food products. However, existing unsupervised anomaly detection methods mainly rely on RGB-pretrained visual representations, which may not adequately capture the transmission behavior of Sub-THz images. This paper proposes a Beer-Lambert guided representation learning framework for unsupervised anomaly detection in Sub-THz food inspection images. The proposed method introduces an attenuation decomposition module as an auxiliary regularization module that constrains student representations through attenuation reconstruction during training. In addition to the conventional one-class setting, we introduce a Leave-One-Food-Out protocol to evaluate generalization capability under unseen food categories. Experimental results on the Inline-Food-Inspection-THz dataset show that the proposed method improves overall anomaly detection performance over the baseline method.

Evaluating representation similarity is fundamental to representation learning. However, existing metrics suffer from significant limitations: they lack interpretability due to shifting baselines, lack robustness to outliers, and are computationally intractable for large datasets, forcing reliance on heuristic approximations. To address this, we develop an ordinal-similarity framework, instantiated by the Triplet (TSI) and Quadruplet (QSI) Similarity Indices, which measure alignment by quantifying the consistency of ordinal relationships. We theoretically demonstrate this formulation is inherently interpretable, robust to outliers, and computationally efficient. Finally, we establish a formal equivalence between TSI and local neighborhood alignment, measured by Mutual Nearest Neighbors. Empirically, we validate these properties and show that ordinal similarity offers a scalable approach to measuring alignment, enabling practitioners to better understand and design representations.

Learned representations in intelligent sensing systems are often evaluated by reconstruction fidelity or downstream prediction accuracy, but these criteria do not specify which latent distinctions are justified by the sensing process. In sensor-conditioned environments, nuisance factors can change measurements without changing the scene, while distinct scenes may be indistinguishable under limited sensing capability. This paper formulates sensor-conditioned representation correctness as preserving sensing-supported scene distinctions while suppressing nuisance-induced and sensor-unsupported variation. We introduce the scene-relevant observation quotient, a representation target induced by sensing-supported distinguishability after nuisance canonicalization, and develop Observation-Quotient Tucker-Structured Autoencoding (OQ-TSAE), a scene-nuisance factorized framework with diagnostics for false distinction, false merge, nuisance sensitivity, and latent ordering consistency. Experiments on a controlled benchmark show that quotient-consistent supervision improves representation-correctness diagnostics over reconstruction-oriented, metric-learning, and contrastive-learning baselines. Sensitivity, perturbation, and ablation studies show the importance of quotient-aligned supervision, reliable quotient relations, and quotient geometry. Complementary real-radar experiments show that a reconstruction-only OQ-TSAE variant retains competitive downstream utility, robustness under observation degradation, and low seed-to-seed variability. These results suggest that sensor-conditioned representations should be evaluated not only by predictive utility, but also by whether their latent geometry preserves sensing-justified scene distinctions.

Progress in AI has largely been driven by methods that assume less. As compute and data increase, approaches with weaker inductive biases generally outperform those with stronger assumptions. This is particularly characteristic of the field of Visual Representation Learning, where approaches have gone from being dominated by Supervised Learning, to Weakly Supervised Learning, to the now widespread success of Self-Supervised Learning without human labels. Yet, even modern Self-Supervised Learning approaches still depend on strong inductive biases such as augmentations, masking, or cropping. If this trend holds, even these remaining biases should become bottlenecks at scale -- and our experiments confirm this: the optimal strength of inductive biases decreases as data grows. This motivates the search for approaches that rely on fewer assumptions. To this end, we introduce Temporal Difference in Vision (TDV), a new paradigm for self-supervised learning from video that avoids existing inductive biases, relying instead on a causal assumption that the past causes the future. TDV functions by jointly training an image encoder and a motion encoder so that the current frame's representation plus the encoded motion equals the next frame's representation. Despite not leveraging any strong inductive biases, TDV matches state-of-the-art recipes on dense spatial tasks, laying the foundation for representation learning without strong assumptions.

We present our approach to SemEval 2026 Task 4: Narrative Story Similarity and Narrative Representation Learning. Our solution uses contrastive learning with fine-tuned sentence transformers to capture narrative similarity across abstract themes, course of action, and outcomes. We develop two pipelines: (Track A) a single-view method that encodes full narratives with smart layer freezing to reduce overfitting, and (Track B) a multi-view method that models theme, plot, and outcome with view-specific projection heads and self-supervised alignment. Both pipelines build on sentence-transformers models and are trained with contrastive loss on synthetic data. The code is available at the following GitHub repository: https://github.com/dinhthienan33/SemEval2026-Task4-ttda704.

Backdoor unlearning aims to remove a malicious trigger behavior from a deployed model while preserving clean utility. We study the update-free inference-time setting, where model parameters remain frozen. First, we audit a common projection assumption under oracle paired clean and triggered features. Projection succeeds mainly on BadNets and leaves WaNet, Blended, and SIG at 0.683, 0.888, and 0.941 ASR on CIFAR-10 ResNet-18. This failure is not explained by spectral compactness, spatial locality, or subspace misalignment. It is predicted by a logit-triplet gap involving the target margin, target-logit drop, and non-target logit rise. We then introduce InstantForget, a clean-calibrated gated reset that flags anomalous features with a Mahalanobis score and moves only flagged features toward a neutral non-target representation. With one fixed operating point selected on held-out triggered validation, InstantForget reduces average ASR to 0.071 across four non-adaptive CIFAR-10 triggers without triggered samples or parameter updates at deployment. It also reaches 0.981 detection AUROC and transfers to six of eight tested backbones. Reported failures under WaNet, ModelNet10 point blend, two backbone geometries, and adaptive feature-compactness attacks define the method's scope.

Photoplethysmography (PPG) plays a central role in wearable health monitoring and clinical decision support. Yet existing approaches to universal PPG representation learning largely focus on signal-level objectives and often overlook patient-level health context, which limits generalization to complex clinical tasks and heterogeneous cohorts. To address this gap, we construct a large-scale paired PPG-EHR multimodal dataset by distilling fragmented medical histories and clinical records into cohesive, patient-level electronic health records (EHR). Building on this resource, we propose Clinical Anchored Pretraining for PPG (CAP). During pretraining, CAP performs cross-modal contrastive alignment that anchors PPG representations to patient-level clinical semantics, guiding the encoder beyond waveform fitting toward modeling consistency in a patient's overall physiological state. During downstream adaptation, the pretrained PPG encoder provides clinically grounded representations that strengthen inductive bias and improve robustness and transferability. Experiments demonstrate that CAP consistently outperforms strong baselines on four diverse downstream tasks. CAP achieves a particularly large gain on respiratory rate prediction (up to +87.6% relative improvement over the state-of-the-art baseline) and delivers an average relative +26.7% across all tasks. We further enhance the interpretability of our approach through comprehensive analyses, including ablations and multiple complementary visualizations of the learned representations. The code for our experiments is available at: https://github.com/gody123gody/CAP .

Affective and cognitive disorders manifest as distributed, time-varying brain network dynamics across regions, channels, and time, challenging robust representation learning from EEG/sEEG for clinical diagnosis. We propose RECTOR (Masked Region-Channel-Temporal Modeling), an end-to-end self-supervised framework that unifies joint region-channel-temporal representation learning beyond fixed anatomical priors. At its core, RECTOR-SA is a hierarchical, block-sparse self-attention induced by Adaptive Functional Partitioning that evolves region structures from static anatomical definitions to adaptive functional regions. The self-supervision is driven by Masked Topology and Representation Learning, which jointly optimizes three complementary objectives: Masked Predictive Modeling, Topological Structure Modeling, and Cross-View Consistency. Across diverse benchmarks, RECTOR sets a new state-of-the-art in EEG emotion recognition and sEEG task-engagement classification. Crucially, its strong robustness to missing channels and cross-montage generalization underscores its potential for large-scale pre-training on heterogeneous EEG/sEEG, providing interpretable insights at both region and channel levels.

Wireless foundation models offer a path toward reusable channel state information (CSI) intelligence for sixth-generation (6G) systems. However, existing generic-backbone adaptation and CSI pretraining methods often treat CSI as task tensors rather than propagation-conditioned channel responses, thereby failing to capture the intrinsic time-frequency-spatial geometry of wireless environments. This paper presents a channel-adaptive roadmap toward CSI-native foundation models, proposing a unified framework that aligns pretraining, positional modeling, and attention control with three channel requirements: scale-aware heterogeneous exposure, physical time-frequency-antenna coordinates, and correlation-bounded token interaction. Extensive experiments demonstrate the superiority of the proposed framework across three dimensions: zero-shot generalization, reducing NMSE by more than 4 dB across spatial-temporal-frequency tasks; scale extrapolation, yielding up to a 5.4 dB gain under 8 times unseen antenna scaling; and inference efficiency, accelerating mobility-aware processing by up to 18.8%. A system-level evaluation with Sionna SYS further shows that the proposed framework uses only 7.01% of dense-pilot overhead, reaches -18.64 dB average NMSE, and improves average net spectral efficiency by 36.6% over dense LMMSE and 15.5% over WiFo, indicating that CSI-native representation learning can support pilot-efficient radio access.

Jet tagging at the Large Hadron Collider increasingly relies on deep learning models trained on massive simulated datasets, leading to high computational costs and limited robustness to detector mismodeling. We introduce JetParticle-JEPA (JP-JEPA), a self-supervised Joint-Embedding Predictive Architecture that learns physically meaningful jet representations directly from continuous particle clouds without tokenization or reconstruction of raw inputs. Built on a Particle Transformer backbone, JP-JEPA predicts latent representations of masked particles while preserving fine-grained kinematic correlations. On the JetClass benchmark, JP-JEPA achieves performance comparable to fully supervised state-of-the-art methods on the full dataset, surpasses supervised baselines in low-label regimes, and significantly outperforms existing SSL approaches. On Top Quark and Quark-Gluon Tagging benchmarks, it remains on par with supervised methods. The learned representations also exhibit strong robustness to missing detector information and improved uncertainty behavior, highlighting JP-JEPA as a promising foundation-model framework for robust and data-efficient jet physics at the LHC.

Catastrophic forgetting is often viewed as the destruction of previously learned knowledge during sequential learning. Building on the Accessibility Collapse framework, we investigate the geometric structure of recoverability in continual learning. Using Split CIFAR-100 and a sequentially trained ResNet-18, we analyze recoverability, representational drift, and recovery complexity across ten tasks. We introduce Recovery Subspace Dimensionality (k_t), a measure of the minimum number of singular directions required to preserve 90 percent of full probe performance. Contrary to our Recoverability Diffusion hypothesis, recovery dimensionality remains stable throughout training (mean k_t = 8.0) despite substantial representational drift. Principal-angle drift strongly predicts recoverability (r = -0.862), and a simple geometric model explains 82.2 percent of recoverability variance. These findings support the Stable Recovery Manifold hypothesis, suggesting that forgotten knowledge remains compactly decodable despite representational reorganization. The results indicate that catastrophic forgetting is primarily an accessibility and manifold-alignment problem rather than information destruction.

Rapid expansion of urban areas and population growth is causing an immense increase in waste production, which demands the need for efficient and automated waste management. In this scenario, automated waste recycling (AWR) using deep learning methods can assist humans in optimal waste management. Recent deep learning approaches for AWR provide promising waste segmentation performance, however, these methods rely on large backbone networks that are inefficient for AWR systems and suffer from performance deterioration in cluttered scenes. To this end, an optimal waste segmentation network is introduced which effectively utilizes the spatial domain to capture localized structural dependencies and the spectral domain to efficiently extract global contextual relationships. This cascaded design allows the network to progressively leverage both local and global representations across complementary domains to highlight the semantic information necessary for effective segmentation of various waste objects. Furthermore, auxiliary feature enhancement module (AFEM) is introduced to enhance the target objects' boundaries and blob amplification for better segmentation in cluttered scenarios. Extensive experimentation on ZeroWaste-aug, ZeroWaste-f and SpectralWaste datasets reveals the merits of the proposed method.

Learned representations are commonly evaluated through predictive performance, calibration, robustness, uncertainty estimation, and behavior under distribution shift. Yet these criteria do not determine whether the representation itself remains sufficient for organizing observations relevant to an explanatory task. We develop VER (Vigilance Explicative et Representationnelle; explanatory and representational vigilance) around a narrower question: can a system detect when its current representation becomes explanatorily insufficient without confusing insufficiency with ordinary error, missing data, uncertainty, or distribution shift? The current VER framework follows seven stages: TRACE, EVIDENCE, INSUFFICIENCY, REGIME HYPOTHESES, TRANSITION ASSESSMENT, VIGILANCE, and PROBE. It treats structured residuals as signals rather than verdicts, distinguishes data insufficiency from representation insufficiency, preserves multiple hypotheses under non-identifiability, allows a legitimate NON-DETERMINED outcome, and requires a discriminating Probe before stronger conclusions are drawn. It also separates variation, drift, adaptation, and representational transition, and introduces Present Enrichment before attributing explanatory value to history. Two paired thought experiments and a falsifiable benchmark are proposed. VER is not claimed to be empirically validated here; its contribution is an explicit architecture designed for auditability and for selecting observations that discriminate among competing explanations.

Learning compatible representations aims to learn feature representations that can be used interchangeably over time whenever a model undergoes updates. In this paper, we demonstrate that stationary representations learned by d-Simplex fixed classifiers imply compatibility as in its formal definition. This result establishes a foundation for future works and can be directly exploited in practical learning scenarios. We address the challenge of learning compatibility using $d$-Simplex fixed classifiers when the model is sequentially fine-tuned. Learning according to a d-Simplex fixed classifier with the cross-entropy loss aligns feature distributions at the first-order statistics. Consequently, it may not fully capture higher-order dependencies in the representation between model updates. To address this issue, we demonstrate that training the model using a $d$-Simplex fixed classifier through a convex combination of the cross-entropy loss and a contrastive loss not only captures higher-order dependencies, but is also equivalent to learning with the cross-entropy under the compatibility constraints. We confirm our findings with extensive experiments also considering a new scenario where a pre-trained model is sequentially fine-tuned and occasionally replaced with an improved model. We show that stationary representations enable uninterrupted retrieval services (without reprocessing gallery images) while improving performance during model updates and replacements, achieving state-of-the-art. Code at https://github.com/miccunifi/iamcl2r.

Transformer-based models have emerged as leading paradigms in time-series forecasting in recent years, employing self-attention mechanisms to capture long-range dependencies. Despite their success, these single-stage forecasting architectures exhibit persistent systematic residual biases arising from structural discrepancies, unmodeled stochastic components, or inadequate multi-scale temporal representations. This limitation persists when residuals are treated as irreducible noise, precluding adaptive correction of structured error patterns. To address this limitation, we introduce a two-stage, model-agnostic framework that explicitly decouples forecasting and residual learning into distinct stages of representation learning. A base transformer first generates the initial predictions. Subsequently, a dedicated meta-corrector dynamically models structured error patterns across multivariate channels, preserves cross-variable dependencies, and iteratively refines the residual bias of the base transformer. By formalizing this pipeline as a hypothesis space expansion, our framework addresses approximation limitations inherent in single-stage architectures, removes reliance on restrictive assumptions, and enables end-to-end learning of complex error dynamics. Evaluated on eight popular benchmark datasets using established protocols, our approach achieves state-of-the-art performance, with significant improvements in standard metrics (MSE, MAE). The results demonstrate the framework's ability to mitigate systematic biases and enhance robustness to complex temporal dynamics, advancing the practical applicability of transformer-based forecasting models.

The recent receptance weighted key value (RWKV) model combines RNN-style recurrence, offering a linear-complexity alternative to Transformers' quadratic self-attention for modeling global dependencies. However, when directly applied to point clouds, RWKV, originally developed for sequential text, struggles to capture local geometric structures and model spatial dependencies effectively. To address this, we propose the \textbf{P-RWKV} block, which bridges the gap between sequence modeling and irregular 3D geometry while preserving the efficiency advantages of RWKV. It consists of a Local Perception Expansion (LPE) component to expand contextual perception along the spatio-temporal sequence and a Spatial Context Enhancement (SCE) component to strengthen spatial awareness. To validate the effectiveness of P-RWKV for point cloud understanding, we construct PointER, a single-modality self-supervised representation learning framework whose encoder is composed of stacked P-RWKV blocks. Furthermore, we extend P-RWKV to a cross-modality setting and integrate the proposed core sub-modules into multiple architectures, demonstrating strong plug-and-play flexibility and architectural generality. Extensive experiments show that the P-RWKV block and its key sub-modules achieve competitive performance across various tasks with lower computational cost and inference latency. Code will be released upon acceptance.

Metal additive manufacturing enables the fabrication of complex parts, but achieving consistent build quality remains challenging due to interactions induced by repeated layer-wise melting, solidification, and reheating across the 3D build. Advanced sensing provide a great opportunity to collect rich observations of the actual manufacturing process for real-time quality monitoring and control. Yet, existing methods often have limited ability to represent multi-layer interactions and quantify their contributions to quality. In this paper, we develop a novel spatiotemporal graph transformer for modeling 3D neighborhood interactions and learn their effects on build quality in metal additive manufacturing. Specifically, we first introduce a weighted network representation of the manufacturing process, where fusing locations are modeled as nodes, and their spatial- and process-dependent relationships are encoded as edge weights. This representation also enables the integration of multimodal data (e.g., geometric design, process settings, and in-situ sensing data) into a unified structure for downstream learning tasks. Building on this network, we further design a dual-attention graph transformer that captures both within-node feature dependencies and cross-node neighborhood interactions for quality representation learning. Experimental results show that the proposed framework significantly outperforms image-based, sequence-based, and graph-based models in characterizing process-quality relationships. More importantly, the incorporation of cross-layer interactions is critical for improving quality prediction performance. This framework is broadly applicable to other tasks involving network modeling and graph-based representation learning.

Self-supervised learning (SSL) has achieved remarkable representation learning performance, but many existing methods rely on large batch sizes, memory banks, momentum encoders, or global synchronization mechanisms that substantially increase computational cost and training complexity. In this work, we propose Semantic Mutual Information (SMI), a lightweight self-supervised objective derived from a mutual-information-inspired dependency formulation under Gaussian assumptions. Unlike conventional correlation matching objectives that operate on high-dimensional feature correlation matrices, SMI performs optimization on a sample-level dependency matrix through a nonlinear transformation of pairwise correlations. This formulation induces distinct optimization dynamics that emphasize strongly dependent semantic pairs while maintaining representation diversity. Experimental results on ImageNet using a ResNet-50 backbone demonstrate that SMI achieves competitive linear evaluation performance relative to state-of-the-art SSL approaches while substantially reducing computational complexity. Across multiple low-resource benchmarks, SMI consistently improves transfer performance over Barlow Twins, particularly on fine-grained datasets. Furthermore, analyses of optimization dynamics and representation geometry suggest improved alignment--redundancy balance, greater feature diversity, and more spatially localized semantic representations. These results indicate that nonlinear dependency optimization provides an effective and computationally efficient alternative to conventional correlation-based self-supervised learning objectives.

Representation learning is central to modern machine learning, but most research examines how representations are optimized after a framework has been selected. Less attention is given to when a new representational level becomes necessary. This article introduces the Bootstrap Theory of Representational Emergence (TBER), an initial conceptual theory and research program describing how new representations arise when existing ones become explanatorily insufficient. A representation may remain descriptively useful while failing to make certain observations, relations, transformations, or organizational properties intelligible. TBER treats this explanatory insufficiency as a positive signal for representational transition rather than as simple falsification or prediction error. The proposed recursive process follows five stages: stabilized observation, anomaly detection, recognition of explanatory insufficiency, representational emergence, and provisional stabilization. The framework concerns transitions between scientific or computational representations, not equivalent transitions within the physical systems being observed. Its scope includes representation learning, latent spaces, foundation models, world models, digital twins, adaptive biological systems, and scientific discovery. TBER does not propose a new algorithm, model architecture, benchmark, or optimization procedure. Its contribution is meta-representational: it provides a framework for interpreting when and why new representational levels become necessary. A possible implication for future artificial intelligence is the development of systems able to detect when their own internal representations have reached explanatory limits and to initiate representational refinement or transition.

In the current era of deep learning and especially generative models, there is significant investment in training very large deep neural networks. Thus far, such models have been "black boxes" that are difficult to understand in the sense that they have opaque internal mechanisms, leading to difficulties in interpretability, reliability, and control. Naturally, this lack of understanding has led to both hype and fear. This book is an attempt to "open the black box" and understand the mechanisms of large deep networks, through the perspective of representation learning, which is a major factor - arguably the single most important one - in the empirical power of deep learning models. A brief outline of this book is as follows. Chapter 1 will summarize the threads that underlie the whole text. Chapters 2, 3, 4, 5, and 6 will explain the design principles of modern neural network architectures through optimization and information theory, reducing the process of architecture development (long having been described as a sort of "alchemy") to undergraduate-level linear algebra and calculus exercises once the underlying principles are introduced. Chapters 7 and 8 will discuss applications of these principles to solve problems in more paradigmatic ways, obtaining new methods and models which are efficient, interpretable, and controllable by design, and yet no less - sometimes even more - powerful than the black-box models they resemble. Chapter 9 will discuss potential future directions for deep learning, the role of representation learning, as well as some open problems.

Scaling reinforcement learning (RL) to diverse multitask settings remains a central challenge. While recent advances in model-based RL achieve strong performance, they rely on planning and complex training pipelines, making it unclear which components are essential for scalability. We revisit this question and argue that the primary driver of scalable multitask RL is not model-based control, but \emph{representation learning}. In particular, we show that combining predictive, model-based representations with high-capacity value function approximation is sufficient to achieve strong performance, even without planning. We evaluate a simple model-free algorithm, MR.Q, coupled with auxiliary predictive objectives into a scalable actor-critic architecture. This approach outperforms a recent world-model-based method and a range of deep RL baselines across a diverse suite of multitask continuous control tasks, while significantly reducing computational overhead and improving wall-clock efficiency. We observe consistent improvements with increased model capacity and show through ablations that predictive representation learning is critical for performance.

Despite progress in image tokenization, standard methods encode redundant information by mixing all granularities within each token, thus redundancy persists between tokens. The mix of information of different granularity also complicates the training of generators. This paper introduces SelfBootTok, a method that resolves this by cleanly decomposing information into global and local token groups. Through self-bootstrapped learning, the model predicts local details exclusively from global tokens, shifting the burden of visual details from the generator to the tokenizer. Consequently, our generator is far more efficient, requiring only global tokens and reducing computation by approximately 40%, while delivering superior reconstruction and generation. Moreover, this paradigm scales elegantly: by leveraging more data or parameters to self-supervise local representation learning, SelfBootTok achieves a new state-of-the-art gFID score of 1.56 using only 64 tokens.

We consider multi-environment prediction problems. We assume the environments change the distribution of a latent variable, while the mechanisms generating observed covariates and targets remain stable conditional on that variable. For example, hospitals or clinical cohorts may differ in the prevalence of latent patient states, even though the relationships between those states, physiological measurements, and outcomes remain unchanged. Given a dataset from multiple environments, we formulate a Bayesian model for such problems and derive the corresponding variational objective. We show that this objective decomposes into per-environment terms and an additional cross-environment balancing term induced by the model's structure. We use an empirical Bayes method to set the prior and incorporate it into the objective. Based on this objective, we develop an amortized variational algorithm for posterior approximation, and use the resulting learned latent variables to form predictions in new environments.We study our approach through simulations and real-world studies of astronomical source identification, microbiome-based disease detection, and ICU sepsis prediction. Across these settings, our method outperforms previous approaches for prediction in new environments.

The rapid advancement of high-throughput sequencing has led to large, high-dimensional omics datasets. Deep unsupervised learning architectures, particularly Autoencoders (AEs), are increasingly used for dimensionality reduction and representation learning in this domain. However, AEs are highly sensitive to architectural choices and hyperparameters, and unsupervised optimization typically relies on reconstruction loss, which may be a poor proxy for downstream utility. Exhaustive hyperparameter optimization (HPO) is computationally expensive, leading researchers to frequently rely on suboptimal default configurations. To democratize access to large-scale unsupervised HPO research, we introduce $\textbf{BBOmix}$, the first open-source tabular benchmark for unsupervised representation learning on real-world biological data. Our benchmark includes 105,000 evaluations across four AE architectures and seven multi-omics modalities from the TCGA and SCHC datasets. We quantify the correlation between reconstruction loss and downstream task performance and provide an extensive evaluation of state-of-the-art single-fidelity, multi-fidelity, and transfer learning HPO methods, establishing a rigorous baseline for future research in unsupervised biological representation learning.

To leverage the full potential of multimodal data, we need representations that go beyond the state-of-the-art alignment and fusion approaches and exploit all cross-modal interactions without sacrificing modality-specific information. Learning disentangled representations is a principled way to identify these underlying shared and unique factors that are hidden in observational data. However, while multimodal disentanglement is a compelling paradigm, existing methods are largely confined to the two-modality regime due to its inherent scalability bottleneck. To address this, we propose RePercENT, a self-supervised framework designed to surpass these limitations and unlocks scalable pairwise disentanglement beyond two modalities. Through a multimodal `plug-and-play' architecture, our approach operates directly on pre-extracted embeddings, eliminating the need for extensive joint pre-training while making no assumptions regarding the underlying modalities or foundation model backbones. Moreover, we introduce a joint optimization objective for simultaneously deriving the shared and unique components, and provide formal theoretical guarantees that characterize the optimality of our solution. Across diverse modalities and tasks, RePercENT successfully recovers disentangled components while maintaining competitive performance and significantly reducing computational complexity.

Anatomical landmark detection is a fundamental task in medical image analysis supporting a wide range of diagnostic and interventional workflows. Although recent methods have achieved sub-millimetric localisation, accuracy alone is not sufficient for clinical deployment, requiring reliability and robustness in prediction. Despite its clinical relevance, the impact of representation learning in this context is still underexplored. In this work, we introduce CDPM-align, a multi-scale guidance-aligned conditional diffusion pre-training for anatomical landmark detection. Our experimental setup focuses on a few images and a few annotation regimes. Specifically, we employ three popular heterogeneous small-scale benchmark datasets for representation learning via conditional generative pre-training. Furthermore, we consider low-annotation scenarios for the downstream task of landmark detection, with 10 and 25 annotated images, reflecting realistic trade-offs between clinical effort and resource constraints for annotations. Our results confirm that generative pre-training enables the model to learn a robust representation. This improves both accuracy and uncertainty on the downstream tasks, advancing towards safe and efficient clinical deployment.

Ischemic stroke is a major global disease. Treatment decisions are highly time-sensitive, as eligibility for reperfusion therapies relies on the interval between stroke onset and intervention. However, the true onset time is often uncertain in clinical practice, necessitating imaging-based assessment of tissue age as a surrogate marker. Early ischemic changes on routinely acquired non-contrast CT (NCCT) are often subtle, and real-world clinical datasets exhibit pronounced onset-time class imbalance and center-scanner-related heterogeneity. In this work, we propose StrokeTimer, a fully automated framework for onset-time estimation in acute ischemic stroke. StrokeTimer integrates self-supervised disentanglement learning with energy-guided contrastive learning to capture subtle ischemic patterns while addressing long-tailed data distributions under acquisition variability. Onset time is categorized into three clinically relevant windows: <4.5 h, 4.5-6 h, and >6 h. Experimental results on a large multi-center NCCT dataset from two national cohorts, MR CLEAN Registry and MR CLEAN LATE, show that StrokeTimer achieves a macro AUC of 0.69 and a macro F1-score of 0.57, improving the strongest baseline by nearly 50% (p < 0.005). In this realistic, challenging setting, representative baseline approaches exhibit near-chance macro performance. Model explanations further highlight subtle gray-white matter blurring and hypodense regions consistent with established radiological biomarkers. These findings demonstrate the potential of StrokeTimer to support treatment decision-making in acute ischemic stroke. Code is available at https://github.com/BrainVas/StrokeTimer.

Large-scale dynamic weighted directed networks (DWDNs) are widely used to model time-varying interactions among nodes. Latent factorization of tensors (LFT) extracts target knowledge from DWDNs via low-rank embedding. However, similar to many machine learning models, the performance of LFT heavily depends on the selection of hyperparameters. In practice, these parameters are often tuned manually or through grid search, which requires significant computational resources and human effort. Motivated by this challenge, this paper proposes an automated hyperparameter optimization framework based on Differential Evolution (DE) for LFT (DE-LFT). The proposed method integrates DE into the training process of the LFT model to automatically learn optimal regularization parameters $λ_1$, $λ_2$ and $λ_3$. As a result, the model can adaptively search the hyperparameter space and improve prediction accuracy. Experimental results on four real-world datasets demonstrate that the proposed approach achieves lower MAE and RMSE compared with manually tuned baselines while reducing the need for extensive parameter tuning.

Relational Foundation Models (RFMs) promise a single pre-trained predictor that, given any relational database, returns predictions in one forward pass via relational in-context learning (ICL). Yet a substantial gap separates open RFMs from their commercial counterparts, and the origin of this gap has not been systematically understood. We dissect a representative framework, the Relational Transformer (RT), from two perspectives. Model side: we show that RT performs relation-level ICL, and a kernel regression view shows it fails when sparse label-cell coverage yields an underdetermined regression. Data side: we ablate RT's pre-training source and find that existing synthetic-only pre-training and in-distribution pre-training drive the same architecture into different regimes, lazy vs. feature-learning. Probing this gap reveals that the missing ingredient is a support-identifiable relational latent in the label-generation process. These two diagnoses translate into (1) a dual-stage ICL architecture that combines the relational backbone with a batch-level ICL layer lifted from a pre-trained tabular foundation model to overcome relation-level label scarcity, and (2) a homophily-aware synthetic plus continual real-data pre-training mixture, augmented with a prototype-based regularization. These choices define OpenRFM, a simple yet effective RFM that improves average task performance by approximately 30% over the RT backbone and surpasses the commercial model KumoRFMv1 on a large set of evaluation tasks.

Large language models remain vulnerable to jailbreak attacks that hide harmful intent behind seemingly ordinary requests such as role-play, translation, encoding, adversarial suffixes, and multi-turn buildup. Existing defenses still struggle to handle these attacks without over-blocking benign but sensitive requests, partly because they often apply the same action to every prompt and therefore fail to balance safety and helpfulness. We propose NeuroArmor, a white-box runtime defense that uses prompt-specific safe variants as a local safety reference for deciding when intervention is needed and, once triggered, as safe targets for intervention. For each prompt, NeuroArmor builds K safe variants, compares the prompt state against this local safe reference in hidden-state space, and routes anomalies either to a refusal branch for malicious prompts or to a helpful recovery branch for borderline benign prompts. On Llama-3-8B-Instruct, NeuroArmor reduces malicious attack success rate (ASR) from 41.56% to 1.57% while lowering benign false positive rate (FPR) on the shared benign pool from 30.26% to 22.05%; matched baselines remain substantially weaker on this trade-off. External-judge and manual behavioral evaluations further show that the remaining non-blocked outputs are much less likely to be operationally harmful. Overall, NeuroArmor provides a more effective runtime strategy for jailbreak defense by combining prompt-specific consistency checking, routing, and selective intervention.

Representation learning is often described as preserving the information in an input that is relevant for prediction. This work asks what relevance means for a fixed supervised decision problem. A representation is defined to be Bayes-sufficient for a joint distribution and loss if some prediction head can use it to implement a Bayes-optimal action rule. This makes the target information loss-dependent. In the almost-surely unique Bayes-action case, the relevant object is a Bayes quotient, which identifies inputs that require the same Bayes-optimal action. A representation is sufficient when it refines this quotient, and Bayes-minimal when it is informationally equivalent to it. The framework connects naturally to property elicitation: zero-one loss requires the Bayes class, squared loss the conditional mean, Brier loss the conditional probability in binary prediction, and log loss or strictly proper scoring rules the predictive distribution. Controlled finite experiments, learned neural bottleneck experiments, and a real-data iNaturalist taxonomic refinement experiment illustrate the distinction between sufficiency, minimality, and retained non-required information. For a fixed supervised problem, the distribution and the loss determine the Bayes action, the Bayes action determines the quotient, and the quotient determines the minimal information required for Bayes-optimal prediction.

Deep neural networks learn representations where individual features often lack interpretable meaning; a single neuron may activate for scattered, unrelated inputs. We introduce coherence, a geometric property inspired by neural coding in the brain, where neurons like grid cells and head direction cells respond to contiguous regions of state space. A non-negative matrix is coherent if each row (sample) attends to geometrically clustered columns (features) and vice versa, and in addition every sample is well described by some feature and every feature is needed by some sample. We prove that coherent matrices induce a bounded interleaving between the Vietoris-Rips filtrations of samples and features, guaranteeing that both spaces share compatible topological structure. This geometric constraint facilitates interpretability. For example, if data lies on a circle, coherent features must tile that circle into contiguous arcs. We introduce Coh, a differentiable objective function based on Fréchet variance that enforces coherence during training. Unlike sparsity, which bounds how many samples a feature activates on, coherence bounds which samples, requiring geometric connectivity rather than only rarity. This yields not just interpretable features but an interpretable feature space. We validate Coh in an auto-encoder using synthetic and rotated MNIST datasets and in a token embedding of BERT using language data.

Model dimension ($d_{model}$) is a fundamental hyperparameter in transformer language models, yet its role in setting the geometric limits of feature representation remains under-explored. Grounded in the Linear Representation and Superposition Hypotheses - which propose that models encode features as near-orthogonal directions in latent space - we develop a framework for estimating how many such directions a model can support. We first establish the embedding matrix as a measurable proxy for near-orthogonality constraints across the latent space: the boundary between meaningful token relationships and incidental similarity in the pairwise cosine similarity distribution gives a concrete estimate of the model's accepted deviation $\varepsilon$ from perfect orthogonality. Applying this metric across dozens of open-source models reveals two classes: models with high $\varepsilon$ whose embeddings lack near-orthogonal structure, and models with low $\varepsilon$ that maintain it. We then show that the standard Johnson-Lindenstrauss lemma greatly underestimates the packing efficiency of trained representations, and derive an adjusted capacity formula in which the number of near-orthogonal directions depends on the ratio of vectors to dimensions ($k/d$) rather than the raw count - a single modification that cuts prediction error by two orders of magnitude with no extra parameters. Combining these results, we define representational capacity as an upper bound on the number of distinguishable directions available for features and embeddings in a model's latent space. Capacity is exponentially sensitive to $\varepsilon$, and larger models favor tighter orthogonality constraints over maximizing raw capacity - a pattern compatible with several explanations (a stability-capacity trade-off, a ceiling on usable concepts, or confounds with model scale) that we leave to future work.

Geometric analysis fundamentally distinguishes between \textit{extrinsic} and \textit{intrinsic} perspectives. The dominant paradigm in current 3D representation learning relies on either extrinsic spatial structures or high-level semantics, struggling to capture the essence of shape identity and underlying manifold topology. To bridge this gap, we introduce a novel 3D representation learning paradigm, namely \textbf{PRISM}, for \textbf{P}re-training, which learns isometric embeddings by \textbf{R}ecovering the \textbf{I}ntrinsic \textbf{S}urface geodesic \textbf{M}etric. PRISM incorporates a topology-enforcing objective that explicitly constrains the structure of latent space, alongside a specialized two-stage training recipe mitigating sample imbalance inherent in the distribution of geodesic distances. Experiments demonstrate that our approach shows satisfactory accuracy, robustness, and high efficiency in geodesic distance prediction and achieves superior performance across diverse downstream tasks, including shape recognition, surface parameterization, and non-rigid correspondence. The code will be publicly available at https://github.com/AidenZhao/PRISM.

Reinforcement Learning (RL) has long served as a model for goal-directed animal behavior in neuroscience. Modern deep RL has shown remarkable success across many domains, further strengthening this connection. The ability to learn abstract representations of high-dimensional state spaces underlies much of this success. However, theoretical understanding of these learned representations remains limited, hindering direct comparisons between models and animal learning. We address this gap by analyzing deep RL representations through the lens of MDP reduction theory. Investigating canonical RL algorithms in a navigation task, we find that even when performance is comparable, the value-based method (DQN) learns representations that are invariant to MDP homomorphism symmetries, while the policy-gradient method (PPO) learns representations invariant to action symmetries. These differences emerge consistently across domains, have downstream consequences for transfer learning, and appear in LLMs in a prompt-dependent manner. Our findings provide a principled approach to comparing learned representations across RL algorithms, with demonstrated practical implications and possible insights for neural coding in the brain.

Sparse high-dimensional representations are conducive to uncovering nontrivial structures in unsupervised exploration of data. Such a representation can deal with the dense connectivity in graphs relevant to community detection problems. However, sparse high-dimensional representations are capable of doing more, including manifold tiling and feature learning. Conventional algorithms optimize in the space of computationally intractable completely positive matrices or relax the problem to the space of doubly nonnegative matrices that scale with sample size in a way rendering them impractical for large data sets. Some of these methods also impose a row sum constraint, such as double stochasticity. Row sum constraints have the added advantage of being shift-invariant, in the context of manifold tiling. Constraints on the row sum of output similarity matrices require nontrivial online learning rules. Addressing these needs, we propose a versatile online biologically plausible learning algorithm capable of learning sparse shift-invariant representations, useful for clustering, manifold tiling, or sparse coding, depending on the data structure.

Offline meta-reinforcement learning leverages static datasets to enable agents to generalize to unseen environments by combining offline efficiency with meta-learning adaptability, yet it faces key challenges from context and policy distribution shifts. These issues hinder agents from adapting to online environments, and are further exacerbated under sparse-reward settings. As a result, agents often become trapped in an inherent pattern dilemma, failing to achieve robust generalization. In this work, we propose a novel framework that integrates information-theoretic task representation learning with a Transformer-based stochastic world model. Our approach extracts task-defining latent variables that are invariant to behavior policy, thereby effectively mitigating the context distribution shift. To further handle policy shift and model exploitation, we apply a conservative value penalty to imagination-based rollouts, preventing the policy from exploiting model inaccuracies while maintaining robust adaptation. Extensive evaluations demonstrate that our method outperforms state-of-the-art approaches, with superior stability and generalization under out-of-distribution and sparse-reward settings.

Neural algorithmic reasoning has emerged as a popular research direction. It aims to train neural networks to mimic the step-by-step behavior of classical rule-based algorithms. More specifically, the execution of such algorithms can be abstracted as a sequence of states, where each state represents the intermediate outcome after an execution step. The training objective is to generate state sequences that replicate the underlying algorithmic process. A common framework for this task adopts an encoder-processor-decoder architecture, where the encoder learns representations of states, the processor simulates algorithmic steps, and the decoder reconstructs output states. While prior work has focused on improving the processor, the role of the encoder in representation learning has received little attention. Most methods rely on simple MLP encoders, raising the question of whether such representations are sufficiently informative for supporting algorithmic reasoning. This paper investigates how to improve encoder representations for neural algorithmic reasoning. We propose a reconstruction module that aims to recover the input state from its encoded representation. This auxiliary reconstruction task encourages the encoder to retain critical information about the input. We demonstrate that incorporating this task during training improves the performance of existing neural architectures on standard benchmarks. Furthermore, we observe that current encoders often underutilize the correlations among features within a state. To address this, we draw inspiration from self-supervised learning and design an enhanced variant of the auxiliary task that encourages the encoder to capture intra-state feature dependencies. Experimental results show that our method enables the encoder to learn richer representations, thereby enhancing the performance of existing processors on algorithmic reasoning tasks.

Modern recommendation systems predominantly train retrieval and ranking as separate models despite both increasingly relying on large transformers encoding the same user behavior data, duplicating parameters, compute, and serving cost. Prior work unifies the model architecture but not the full pipeline: input formats, training procedures, and serving stacks remain fragmented across stages. We present UniPinRec, which achieves full-stack unification of retrieval and ranking at Pinterest: one input format, one model, one training stage, deployed within existing serving infrastructure. A shared transformer encodes the user action sequence into candidate-independent representations that branch into retrieval (ANN dot-product) and ranking (cross-attention) via task-specific heads. Three ideas make this work: (1) Masked Action Modeling (MAM) eliminates interleaving, enabling weight sharing without doubling context length; (2) Blended training examples pair action sequences with feedview impression slates to satisfy both objectives jointly; (3) Cross-stage KV cache sharing reuses user-history computation from retrieval for ranking, reducing total FLOPs versus serving two independent models. Deployed in the Pinterest core surfaces, UniPinRec delivers approximately +1% online engagement lift while cutting end-to-end serving latency by 11.1% and lifting QPS by 63.6%. To our knowledge, this is the first full-stack unification of retrieval and ranking, covering inputs, model, training and serving, deployed in a production recommendation system.

Transformer-based architectures have advanced sequence modeling in language and vision, yet general-purpose representation learning for heterogeneous multivariate time series remains underexplored. We introduce CHARM (Channel-Aware Representation Model), which incorporates channel-level textual descriptions into a Transformer encoder equivariant to channel order. CHARM is trained with a Joint Embedding Predictive Architecture (JEPA) and a novel loss promoting informative, temporally stable embeddings; latent-space prediction encourages robustness to sensor noise while description-aware gating provides interpretability through learned inter-channel relationships. Across anomaly detection, classification, and short- and long-term forecasting, the learned embeddings achieve strong performance using only a linear probe. Performance is driven primarily by the JEPA objective and conditioning architecture, with text descriptions serving as channel identifiers for cross-dataset generalization.

RNA sequencing produces rich and diverse datasets of gene expression, offering compelling insights into cellular state and function that have many applications in drug discovery. Modeling such data is challenging due to inherent technical noise and experimental batch effects, as evidenced by many existing transcriptomic foundation models (FMs) underperforming relative to linear baselines. Such results raise the question of whether deep representation learning provides a distinct advantage over the direct use of raw transcript counts. Our work explores this by developing a new self-supervised model, TxFM, with a focus on inductive representation learning evaluations. TxFM employs a masked autoencoding approach tailored to diverse RNA-seq count data, and our ablation study empirically identifies crucial architecture configurations required for strong transfer performance. Additionally, we curate a public training corpus, DiverseRNA-1.4M, and find that TxFM trained on this curated dataset yields high-fidelity gene representations that outperform FMs trained on atlas-scale corpora over 100x larger. Overall, our results indicate that inductive self-supervised learning is a viable modeling approach for transcriptomics representation, provided a careful synthesis of model architecture and training data curation.

Large perturbation models require training data encompassing chemical, cellular, and assay diversity. Current transcriptomic resources for small-molecule modeling, however, are fragmented across technologies, metadata conventions, controls, doses, and preprocessing pipelines. We introduce Chem-PerturBridge, a harmonized multi-dataset resource comprising over 37k compounds, 136 cellular contexts, and 1.25M transcriptomic samples across eight assay types, with standardized identifiers, metadata, and replicate-aware condition-level effects. We use the resource to evaluate matched-condition agreement across datasets and replicate agreement within datasets. Matched same-compound conditions generally show weak agreement in fine-grained logFC rankings and magnitudes across most dataset pairs, often falling below same-context different-compound baselines. In contrast, logFC direction agreement is substantially more stable and usually exceeds these baselines. We further evaluate Chem-PerturBridge as a pretraining resource for compound representation learning. Under a compound-held-out OP3 evaluation split, embeddings pretrained on Chem-PerturBridge improve over L1000-only embeddings, Morgan fingerprints, and the descriptor-free OP3 baseline across metrics. An extensive molecule-holdout evaluation across 11 datasets further shows that models trained on Chem-PerturBridge outperform or match those that are not. Chem-PerturBridge therefore supports both diagnostic evaluation of cross-dataset signature agreement and model-oriented reuse of heterogeneous perturbation transcriptomic data.

Representation learning is a powerful tool for spatio-temporal abstraction within reinforcement learning (RL). Two well established approaches are through the successor representation (SR) and the default representation (DR). The SR encodes states by the future trajectories they induce, capturing information flow decoupled from reward. The DR builds on this by weighting trajectories with reward, integrating credit-assignment structure into the representation. Eigenvectors of both representations have been used to support a range of downstream tasks -- including option discovery, reward shaping, transfer learning, and exploration. We introduce a structurally distinct formulation: the terminal representation (TR). The TR encodes reward-weighted trajectories similarly to the DR, but can be learned as a lower-dimensionality object, and can be used directly for the mentioned applications without eigenvector computations. Eigendecomposition also imposes the assumption of symmetric transition dynamics, which the TR can bypass. In this work we develop the theoretical foundations of the TR: its derivation, convergence of two learning algorithms, its use for zero-shot compositionality, and equivalences between alternative reward formulations. We further show the TR is embedded in the top DR eigenvector, allowing it to capture the same underlying knowledge without eigendecomposition. Additionally, we provide empirical evidence of the TR as a viable alternative to existing representations in subsidiary applications, while requiring less computational overhead to learn, store, and use.

Learning generalizable vision-language-action (VLA) models from large-scale human videos is promising but challenging due to cross-embodiment discrepancies in both visual observations and executable actions. While latent action models reduce the action execution gap by learning action abstractions, they still rely on visual features. Thus, misaligned human and robot visual representations can lead to inconsistencies in policy inputs and induce domain-dependent latent actions, hindering effective co-training with human videos. To address this, we propose HARP, a human-robot aligned representation learning framework for more effective VLA pretraining from human videos. Specifically, HARP uses limited paired human-robot demonstrations as cross-embodiment bridges and abundant unpaired human and robot videos as a scalable dynamics supervision data source. It trains a robot-adapted visual encoder and a latent action model with manipulation-centric auxiliary cues and a source-relative pair-discriminative alignment loss, which adapts robot representations toward human semantics while preserving pair-level discrimination. The learned aligned vision encoder and latent action model provide a unified vision and action representation for VLA-style policy learning, where human and robot videos provide vision-language-to-latent-action supervision and a lightweight robot action head grounds latent actions into executable commands. Experiments on feature visualization, simulation, and realworld manipulation show improved human-robot alignment and downstream policy performance, achieving 4.481 average length on CALVIN ABC$\rightarrow$D and a 7.1% realworld success rate gain over the strongest baseline.

Out-of-distribution (OOD) detection for time-series data remains comparatively underexplored compared to vision and language, with a limited principled understanding of how supervised time-series representations can be leveraged for reliable detection under distributional shifts. This work formulates time-series OOD detection as representation learning with hyperspherical embeddings, where class-conditional structure is induced by a von Mises-Fisher (vMF) likelihood-based objective on the unit sphere. The learned representation combines time- and frequency-domain views of the input signal via domain-specific encoders, integrating them into a joint embedding space for OOD detection. Detection uses distance-based scores over the learned embeddings, including k-nearest neighbors (k-NN) and Mahalanobis scores. We evaluate the approach at scale on the complete UCR and UEA time-series archives under a cross-dataset protocol. Empirical results show consistent improvements under both k-NN and Mahalanobis scoring over strong contrastive learning and post-hoc baselines in the same setting. Code is available at https://github.com/tiiuae/hypertf-time-series-ood.

We introduce HQ-JEPA, a hybrid quantum-classical joint-embedding predictive architecture for cross-modal remote sensing representation learning. The proposed framework extends JEPA-style masked latent prediction to paired Sentinel-1 and Sentinel-2 imagery by predicting masked target representations from visible context regions while aligning heterogeneous modality features in a shared embedding space. To improve representation quality, HQ-JEPA combines four complementary objectives: latent token prediction, cross-modal token alignment, SIGReg-based Gaussian regularization in the fused latent space, and a differentiable SWAP-test-based Fidelity Quantum Similarity (FQS) loss. Unlike pixel reconstruction methods, HQ-JEPA learns semantic representations directly in latent space and uses quantum state-overlap-based similarity as an additional regularization signal. We evaluate the pretrained encoder on GeoBench classification and segmentation tasks under linear probing and fine-tuning settings. Results show that HQ-JEPA achieves competitive and often superior performance over strong self-supervised and remote sensing foundation-model baselines, demonstrating the benefit of integrating predictive self-supervision, cross-modal geometric regularization, and quantum fidelity-based representation learning for remote sensing applications.

In many practical reinforcement learning environments, observations are far higher-dimensional than the variables that matter for control. In this work, we ask: can we learn representations that capture only control-relevant features of the environment? We study this question through the empowerment objective, which maximizes an agent's influence over the environment and is widely used for unsupervised skill learning. We show that empowerment agents induce two distinct representations -- forward and backward -- that capture complementary aspects of the state, and both of which are invariant to control-irrelevant features. Thus, empowerment maximization leads agents to learn an implicit, control-centric model of the world. Our analysis highlights the importance of learning representations through interaction rather than from passive datasets: interaction aimed at maximizing control is essential for learning useful invariance properties, a perspective that aligns closely with the causal learning literature.

Traditional multi-modal financial forecasting often relies on scalar sentiment scores, which fail to capture the nuances of financial news. To address this information loss, this paper explores high-dimensional representation learning by replacing discrete polarity ratings with dense FinBERT embeddings within a Transformer-based forecasting architecture. We benchmarked various embedding strategies on the FNSPID dataset, including raw embeddings, attention-weighted aggregation, and a custom Siamese network. While the attention-based mechanism struggled with the low signal-to-noise ratio typical of financial data, the integration of Siamese-optimized embeddings outperformed both the scalar baseline and raw embedding approaches, demonstrating that preserving high-dimensional narrative context yields improved predictive accuracy for short-term stock price movements.

Standard Set Representation Learning methods typically excel on curated data but often overlook the challenge of inference-time element corruption. This refers to scenarios where deployed models encounter element-level degradations, such as outliers or missing components, that may distort set representation and degrade performance. We propose SW-DRSO, a distributionally robust optimization framework tailored for sets. Rather than minimizing loss solely on observed training data, SW-DRSO optimizes a tractable surrogate of the worst-case expected loss over a family of plausible inference-time variations. We introduce a barycentric adversary that approximates the intractable search over corrupted sets by a differentiable training-time optimization over simplex weights. Extensive experiments across four tasks demonstrate that SW-DRSO effectively enhances robustness against corruption while maintaining high overall performance.

Large Language Models have demonstrated remarkable progress in general-purpose capabilities and can achieve strong performance in specific domains through fine-tuning on domain-specific data. However, acquiring high-quality data for target domains remains a significant challenge. Existing data synthesis approaches follow a deductive paradigm, heavily relying on explicit domain descriptions expressed in natural language and careful prompt engineering, limiting their applicability in real-world scenarios where domains are difficult to describe or formally articulate. In this work, we tackle the underexplored problem of domain-specific data synthesis through an inductive paradigm, where the target domain is defined only through a set of reference examples, particularly when domain characteristics are difficult to articulate in natural language. We propose a novel framework, DOMINO, that learns a minimal sufficient domain representation from reference samples and leverages it to guide the generation of domain-aligned synthetic data. DOMINO integrates prompt tuning with a contrastive disentanglement objective to separate domain-level patterns from sample-specific noise, mitigating overfitting while preserving core domain characteristics. Theoretically, we prove that DOMINO expands the support of the synthetic data distribution, ensuring greater diversity. Empirically, on challenging coding benchmarks where domain definitions are implicit, fine-tuning on data synthesized by DOMINO improves Pass@1 accuracy by up to 4.63% over strong, instruction-tuned backbones, demonstrating its effectiveness and robustness. This work establishes a new paradigm for domain-specific data synthesis, enabling practical and scalable domain adaptation without manual prompt design or natural language domain specifications.

Reconstruction-based inference assigns a class by comparing class-wise reconstruction residuals; Sparse Representation Classification (SRC) is a canonical instance whose reliability depends on the geometry of the learned representation. We adopt a strict training-inference separation: SRC is used only as a fixed test-time rule and is never differentiated, unrolled, or optimized during training. In a span-level idealization based on class-conditional spans and their associated projection residuals, we formalize residual-ordering stability through a residual margin and characterize geometric obstructions -- span overlap, dominance, and near-overlap via small principal angles -- that can collapse this margin in worst-case directions. This span-level theory is primary: it specifies when the idealized residual family is well-separated, and it provides a conditional solver-level interpretation for practical residual approximations (e.g., OMP) insofar as they remain close to the span-level residual ordering. Under explicit coverage and separation assumptions, we derive a quantitative lower bound on the (idealized) residual margin. Guided by these targets, we propose geometry-shaping objectives that promote masked within-class self-expressiveness, discourage cross-class reconstruction pathways and inter-class span alignment, and prevent collapse -- without invoking SRC residuals or predictions during training. Experiments on images (COIL-100), text (TREC), and EEG connectivity evaluate all representations under identical fixed SRC/OMP inference and report residual margins and geometric diagnostics; cross-entropy is included only as a reference geometry under the same evaluation protocol.

3D Gaussian Splatting (3DGS) is a recent approach for scene rendering. Although primarily designed for view synthesis, its potential for scene understanding tasks remains underexplored. In this work, we conduct a comparative evaluation of various geometric deep learning architectures for the classification of 3D scenes represented using Gaussian Splatting. We benchmark point-based and graph-based models across both traditional point cloud datasets and dedicated Gaussian Splatting datasets. Scenes are embedded into latent representations, which are evaluated through end-to-end classification, linear probing, and clustering analysis. Our study provides insight into the suitability of different geometry-aware architectures and input feature configurations for learning effective 3D Gaussian Splat representations. The results highlight consistent differences between architectural families and reveal the impact of Gaussian-specific attributes on the quality of representation.

Knowledge distillation (KD) transfers a single scalar prediction from a large foundation model (FM) to compact vertical models (VMs), suffering from diminishing transfer ratio -- the fraction of FM improvement captured by the VM -- as a single scalar cannot convey the rich intermediate knowledge that larger FMs learn. To address this bottleneck, we propose LoopFM (Learning frOm HistOrical RePresentations of FM), a framework that opens a high-bandwidth transfer channel by structuring FM intermediate embeddings as input features (e.g., user history sequence) for downstream VMs, without requiring real-time FM inference at serving and architectural coupling between FM and VM. We provide a theoretical framework for LoopFM with a gain decomposition and transfer-ratio analysis. On three public benchmarks, LoopFM demonstrates strong AUC improvements (e.g., 6%+ on TaobaoAd) and complementary knowledge transfer capability with KD. On industrial-scale systems (billions of examples, trillion-parameter FMs), LoopFM approximately doubles the knowledge transfer ratio on top of KD, delivering a +0.5% conversion improvement in the first half after its initial launch, and +1.03% and +1.22% conversion improvement from two individual launches in the subsequent half.

Functional magnetic resonance imaging (fMRI) is a powerful tool for investigating human brain function. However, the high cost of data acquisition and the inherent subjectivity of psychiatric rating scales often lead to datasets with small sample sizes and variable label quality, especially when targeting a specific neurological condition. Combined with the inherently high dimensionality of fMRI data, these limitations substantially increase the risk of model overfitting. Recent years have seen growing interest in developing fMRI foundation models by combining multiple datasets; however, the computational resources needed for pretraining and fine-tuning are often prohibitive. We show that a lightweight self-supervised framework yields representations that generalize across diverse downstream tasks, outperforming fully supervised baselines and approaching the performance of large-scale models. We introduce BrainSimSiam, a data-efficient self-supervised representation learning framework that leverages positive-only data pairs to learn robust and generalizable features. We demonstrate that the learned representations achieve strong performance across multiple downstream classification and regression tasks, highlighting the potential of BrainSimSiam for data-limited neuroimaging applications.

Many learning problems require predicting how populations evolve under an unknown transformation. A natural representation for such populations is a probability measure, with point clouds as a key example. In this work, we study the measure-to-measure (M2M) regression problem, in which one seeks to learn a map between probability measures from a finite collection of observed input-output pairs. In contrast to classical regression, where individual samples are transformed independently, M2M regression treats entire distributions as the data points. This perspective is vital in certain scientific applications, for example, cellular and molecular biology, where cells are known to evolve not as independent data points but as a collection. However, few existing approaches address the problem of M2M regression with sufficient expressivity and scalability. We present a formalization of nonlinear M2M regression and introduce two easy-to-use, expressive, and scalable approaches to learn such operators: transformers as static M2M maps and transformers as dynamic M2M velocity fields. Our approach leverages the natural measure-dependent and mean-field structure of transformers to learn nonlinear M2M maps on the space of probability distributions. We illustrate the effectiveness of our proposed method to generalize to unseen measures on synthetic experiments, interacting particle systems, and a large-scale patient-derived organoid dataset for predicting treatment response in colorectal cancer.