Tabular Learning

Relational table learning has recently emerged as an important research direction for modeling multiple tables connected through primary key-foreign key (PK-FK) relationships. Despite recent advances, a principled modeling framework tailored to this task remains underexplored. In this paper, we propose Intra-Inter Relational Table Learning (InRTL), a unified framework that explicitly models dependencies both within and across relational tables. Specifically, InRTL formalizes two complementary interaction patterns: intra-table interactions, describing associations among rows within the same table, and inter-table interactions, describing dependencies between rows across PK-FK-linked tables. To model these dependencies, we develop a column-aware table encoder to generate initial row representations, followed by Transformer-based self-attention and cross-attention modules for intra-table and inter-table learning, respectively. To further improve scalability, InRTL incorporates linearized attention and heterogeneous graph neural networks to simplify the self-attention and cross-attention operations. Extensive experiments on ten datasets covering 24 real-world tasks demonstrate the effectiveness of our approach. Code is available at https://github.com/W1nterFloW/InRTL.

Feature transformation improves predictive performance on tabular data by constructing informative abstractions from raw features. Recent generative approaches encode transformation knowledge into continuous embedding spaces for efficient exploration of candidate strategies, but face three key limitations: (1) overlooking hierarchical relationships between low-level features, operations, and high-level abstractions; (2) enforcing order-sensitive embeddings on inherently permutation-invariant transformation sequences, thereby introducing systematic bias; and (3) relying on gradient-based search, which is ill-suited to non-convex transformation spaces. We propose a framework with two complementary components. First, a permutation-invariant hierarchical module captures interactions across features, operations, and abstraction levels, with a self-attention pooling mechanism that maps semantically equivalent structures to consistent embeddings aligned with downstream performance. Second, a policy-guided multi-objective reinforcement learning strategy initializes the search from empirically strong seeds and jointly optimizes predictive accuracy and transformation efficiency. Extensive experiments on diverse tabular benchmarks demonstrate the effectiveness and robustness of our framework against strong baselines. Our code and data are publicly available at: https://github.com/RayLiu1103/PHER.

Biomedical tables often combine thousands of measured variables with only tens or hundreds of labelled samples, a regime that is poorly represented in general-purpose tabular benchmarks. We introduce TabBench-Bio, a living and interactive benchmark of 43 biomedical datasets spanning multiple domains. Under a shared cross-validation protocol, we compare classical estimators, neural networks, and tabular foundation models across 28 feature-by-sample operating points. At the reference cell of 10,000 features and 100 training samples, RealTabPFN v2.5 has the highest point estimate, followed by Logistic Regression and TabDPT, whose point estimates are nearly identical. A paired bootstrap over the target pool separates RealTabPFN v2.5 from Logistic Regression by 145 Elo (95% interval [59, 232]). Tabular foundation models generally occupy the leading ranks, while the strongest configuration depends on the operating point and biomedical modality. The AutoML framework AutoGluon, using its one-hour "extreme" preset, is configured as a separate resource-intensive reference and is reported here at the reference cell. Fold-level predictions, run status, and deterministic aggregations make every reported result reproducible and reusable. We invite the community to contribute: TabBench-Bio is designed to grow, and we welcome submissions of new biomedical tabular datasets, particularly from underrepresented assays and clinical endpoints, for inclusion in future releases. The interactive leaderboard is available at: https://tabbench-bio.eu

Scaling laws in modern deep learning describe how held-out loss improves as model capacity, training data, and compute increase, often following power-law trends. We investigate whether analogous scaling regularities arise in actuarial ratemaking, where data are tabular, heterogeneous, and noisy, and where classical models such as GLMs remain strong baselines. Using a real-world motor insurance portfolio, we train models from different families across increasing fractions of the training data and multiple random seeds, evaluating out-of-sample Poisson deviance, a likelihood-based loss for Poisson count predictions in which lower values indicate better held-out fit. We find that all model families improve with additional data, but scaling exponents differ substantially: TabM exhibits markedly stronger data scaling than purely supervised tabular Transformers and standard MLP baselines. Transformer variants show weak parameter scaling unless augmented with additional inductive biases (TabM-style adaptation or self-supervision). These results provide quantitative guidance on model selection by data regime and suggest that effective scaling on actuarial tabular tasks depends on architecture and loss function objective design, with simple increases in Transformer size providing limited gains.

Relational Deep Learning (RDL) has become a powerful paradigm for learning from multi-tabular data. However, manually defining RDL prediction tasks is a laborious process that frequently results in data leakage. To address this issue, we introduce Relational Task Generation Language (RTGL) - an open-source declarative language that streamlines RDL task formulation by abstracting away low-level SQL details. We showcase RTGL by reconstructing existing RDL benchmark tasks and uncovering their inconsistencies stemming from manually crafted SQL definitions of RDL prediction targets, thereby underscoring the value of a dedicated declarative language. In addition, we demonstrate the practical utility of RTGL by designing various new tasks with diverse forms and target types. Our experiments confirm the robustness and usability of RTGL, as well as its seamless integration with the existing RDL frameworks, making it widely accessible to the community.

Tabular deep learning (TDL) leverages neural networks (NN) to extract patterns from tabular data. Traditional TDL methods follow a supervised learning paradigm, where a target feature is explicitly given. In this work, however, we explore a different approach by employing deep NNs to learn relationships among individual columns within a given table. We investigate whether NNs can predict the values of arbitrarily selected columns in a given table based on the remaining known columns. We call this problem In-Table Prediction (ITB), which is slightly different from table imputation methods and the pretraining task of TDL. Three potential usage scenarios are identified, which, to our best knowledge, have not been extensively studied in the literature. A self-supervised learning approach is applied to address this problem by randomly selecting columns to be masked out and used as learning targets. This work focuses on tabular datasets containing only continuous features. To handle missing values in continuous features, a novel neural layer is proposed to embed both numerical and empty values. Synthetic data is generated based on predefined column relationships, with empty values inserted using two distinct mechanisms. Additionally, an adapted masking strategy is employed to create test data. Performances of three NN architectures, namely MLP, Resnet and Transformer, are evaluated using the generated synthetic data. We conclude that, the attention-based structure outperforms the other two networks, when a sufficiently large number of training examples is available and a relatively large embedding length is chosen. We stress that these findings are obtained under controlled, synthetic conditions with a small number of columns and it should therefore be regarded as an initial, narrowly-scoped investigation rather than a general characterization of ITP on real-world tabular data.

Explainable artificial intelligence (XAI) increasingly calls for actionable counterfactual recourse, yet current methodologies face challenges related to causal invalidity, excessive cognitive burden, and predictive failure. Exhaustive causal search algorithms often require modifications to multiple attributes, whereas additive attribution-guided methods, such as SHAP, ignore higher-order feature synergies, leading to suboptimal predictive momentum and diffuse intervention effort in complex nonlinear models, such as XGBoost. To bridge this gap, we introduce actionable case-based feature importance (A-CBFI), a diagnosis-prescription integrated framework for tabular machine learning. Grounded in structural causal models (SCMs), A-CBFI isolates synergistic interaction bottlenecks and releases suppressive structural locks, translating them into targeted interventions. By mathematically separating the active user intervention space (L_{\mathrm{active}}) from downstream effects and concentrating over 98.3% of the intervention effort on diagnosed root causes, A-CBFI enables highly targeted interventions. Empirical evaluations across the financial and healthcare domains demonstrate that A-CBFI reduces the active human intervention burden by 77.0% while maintaining comparable global recourse cost to exhaustive causal baselines. By prioritizing the diagnosed causal bottlenecks, A-CBFI provides targeted and actionable recourse while maintaining causal validity and achieving full relative convergence across all causally feasible instances.

This first release of Prior Labs in relational learning shows our continued commitment to open science. We open-source three pieces of software that we expect to accelerate research in the field towards meaningful real-world impact. We aim to steer further development based on feedback from, and in collaboration with, the community. Given the early stage of development, our $α$-release targets researchers and early-adopting practitioners. Over the past years, a variety of datasets and tasks for relational learning have emerged, but the community has not converged on a reliable, reproducible way to compare different methods on these tasks. Our $α$-release, RelArena-$α$, provides a unified framework for running and comparing baselines on RelBench v1 by standardizing data loading, evaluation protocols, tuning regimes, and support for systems with custom tuning, inspired by established tabular benchmarks such as TabArena. We plan to work with the research community to further develop RelArena-$α$ into a catalyst for progress in the relational learning community. We release the initial version of TabPFN-Rel, a purpose-built relational harness for TabPFN-3. Currently ranked first among models on RelArena-$α$, TabPFN-Rel makes key improvements upon RDBLearn. Beyond its ranking, TabPFN-Rel serves as a strong baseline, adding to the growing evidence that flattening a relational database into a single table remains competitive with specialized relational architectures on real-world tasks. To facilitate adoption of relational learning methods in research and industry, we release an initial $α$-version of our Relational Predictive Interface, RPI, an open-source, model-agnostic interface that enables early adopters to easily define problems on new databases and apply any model implemented in RelArena-$α$, including TabPFN-Rel, to these problems.

Tabular-to-image methods have emerged as novel approaches to leverage the high predictive performance of convolutional neural networks and vision transformers. They convert tabular data into image representations, mapping each feature at a fixed pixel location derived from a dimensionality-reduction method (e.g., t-SNE, UMAP, PCA). However, they encode only the marginal value of each feature and discard information about feature relationships. We propose TabSOM, a tabular-to-image encoding built on the Self-Organizing Map (SOM), which provides: (i) a spatial layout in which every input feature occupies a fixed canvas position derived from its component plane via collision-free Hungarian assignment; and (ii) a graph that captures pairwise feature relationships derived from the SOM component planes. The resulting image stacks two multi-scale node channels: one encodes feature values at fixed scales, while the other encodes pairwise feature interactions as spatial connections between related features. Two SOM-derived interpretability approaches are introduced: a prototype-inspired partial dependence plot and a class--separation importance score. Benchmarked against twelve existing tabular-to-image methods across public binary-classification datasets, TabSOM ranks first or second on every dataset and achieves the lowest variance of any method evaluated. Interpretability obtained with TabSOM was validated against Random Forest, XGBoost, and SHAP, the class-separation score shows reasonable agreement with established baselines on the top-ranked features while capturing complementary structural information from input data. These results demonstrate that TabSOM provides an effective and interpretable approach for applying deep learning architectures to tabular data, bridging the performance--interpretability gap in this domain.

Relational Deep Learning (RDL) models multi-tabular databases as temporal heterogeneous graphs to enable end-to-end representation learning. However, prevailing RDL evaluation practices rely on static, single-episode dataset snapshots, overlooking the continuous, time-evolving nature of real-world databases. Consequently, current RDL benchmarks fail to capture how model performance changes as new data accumulates over time. To address this limitation, we introduce an incremental, multi-episode evaluation and training paradigm to assess and improve the temporal robustness and adaptability of state-of-the-art RDL models. Using established large-scale datasets, we examine data evolution and model training dynamics, demonstrating that temporal concept drifts occur in the majority of predictive tasks. We present multiple incremental training regimes for fine-tuning the models and demonstrate that transfer learning is both feasible and highly effective in the RDL setting. Alongside a new temporal evaluation metric that prioritizes near-future accuracy, we show that our incrementally fine-tuned models consistently outperform the standard, expensive, from-scratch trained baselines.

The strong performance of foundation models for tabular tasks comes at substantial inference costs. Distilling models into task-specific architectures reduces model size and computational demands but also sacrifices in-context adaptability. Here we introduce TACTICL, an automated task-aware compression framework for tabular in-context learning models that jointly prunes transformer layers and replaces them with lightweight adapters trained on downstream tasks, thus blending in-context with in-weight learning. We study TACTICL on 47 benchmark datasets and show that we can substitute up to 85% of layers without substantial performance drop on a given downstream task. We further show that TACTICL maintains robustness to data shifts, leaving its in-context ability intact. Overall, TACTICL provides a robust framework for exploiting the depth-wise redundancy of tabular foundation models by combining task-specific adaptation and structured compression. We provide the code at: https://github.com/Hebog/tfm_compression

While vision-language models dominate medical representation learning, unstructured text lacks the dense, quantitative diagnostic phenotypes inherent in structured clinical tables. However, existing multimodal pre-training methods underutilize this potential due to semantic-agnostic designs that treat tabular inputs as flat vectors and employ unstable continuous regression objectives. To overcome this, we propose a novel semantic-aware framework explicitly modeling the intrinsic two-dimensional structure of tabular data. First, addressing the inter-feature hierarchy of varying diagnostic importance, we introduce Importance-Aware Adaptive Masking to construct a label-free curriculum prioritizing salient features. Second, addressing the intra-feature continuity-discreteness duality, we propose a Soft-Label Discretized Module that replaces unstable numerical regression with stable distribution matching, thereby mathematically preserving ordinal relationships. Extensive experiments across large-scale dermatology (SLICE-3D, HOP) and ophthalmology (EyePACS) datasets establish a new state-of-the-art (SOTA), demonstrating exceptional robustness and cross-domain generalizability.

Tabular data presents unique challenges for deep learning due to its heterogeneous nature, where numeric features exhibit diverse distributions, scales, and statistical properties. Although recent advances have improved how models learn from tabular data, how numeric data are transformed into model-friendly representations remains comparatively underexplored. We introduce the stretch transformation framework, which formulates numeric feature preprocessing as an optimization problem to make the target function smoother and thus more learnable. Our framework has two variants: (1) unsupervised stretch, which uniformly redistributes feature density via minimax optimization, and (2) supervised stretch, which optimizes target-aware numeric feature transformations from the perspective of target-function smoothness by minimizing the target function's Dirichlet energy in the transformed space. Our theoretical analysis further connects this framework to several popular transformations: unsupervised stretch is closely related to Piecewise Linear Encoding through a shared piecewise-linear geometry and approaches the empirical CDF transformation as the number of bins grows, while supervised stretch becomes closely related to target encoding in the fine-binning limit. Comprehensive experiments on 38 datasets from the TALENT benchmark demonstrate that supervised stretch consistently outperforms all baselines. These results show that explicitly optimizing for target function smoothness is a powerful and underexplored strategy for tabular deep learning.

Tabular data are ubiquitous in real-world applications and are crucial for data-driven prediction and decision-making across science, industry, finance, healthcare, and public services. Tabular foundation models (TFMs) have emerged as a promising paradigm for general-purpose tabular learning, offering reusable predictors across diverse datasets and substantially reducing the need for task-specific training, tuning, and model development. However, their practical deployment remains constrained by distribution shifts, heterogeneous feature semantics, and task-specific patterns that are difficult to capture without costly fine-tuning or additional labeled data. To this end, we propose SkillTFM, a training-free system that shifts TFM adaptation from parameter updates to the gated evolution of agentic skills. The core of SkillTFM is a verifiable and extensible skill bank that couples boundary evidence identification with gated skill evolution: the former characterizes task structure and base-model failure patterns, whereas the latter retrieves and extends reusable skills subject to explicit validation. Across simulated boundary settings and real-world electricity-price forecasting, SkillTFM improves AUC by 0.128--0.142, raises nonlinear-boundary AUC from 0.699 to 0.898. Furthermore, experiments across TFM backbones demonstrate the effectiveness and generality of SkillTFM.

Multimodal learning of images and tabular data is often impaired by ineffective representations, resulting in redundancy, dispersion, and generalization problems. To tackle this challenge, we introduce Graph-Enhanced Descriptor Sequencing (GEDS), a structured feature sequencing algorithm grounded in principles from the Column Permutation Problem (CPP). GEDS refines statistical descriptors of the features through similarity graph-based computations, systematically determining an effective feature sequencing. We incorporate GEDS within an order-aware efficient transformer framework, utilizing order-aware memory tokens that explicitly adhere to the derived feature sequencing via a dedicated loss function. Experimental results across multimodal benchmarks demonstrate that iStructTab effectively minimizes feature dispersion, improving predictive performance and robustness, and highlighting the significance of structured feature sequencing in multimodal learning.

While modern tabular learners excel at capturing statistical patterns, they frequently operate in a semantic vacuum, treating textual features as discrete symbols, ignoring the rich semantics inherent in feature names or cell entries. We propose CASE (Context-Aware Semantic Embeddings), a novel framework that bridges the gap between the semantic understanding of Large Language Models (LLMs) and the statistical capabilities of tabular learners. Unlike existing methods that embed rows in isolation, CASE utilizes a contextualization strategy: we pre-fill the KV cache of a custom-trained Gemma 3-based Tabular Language Model with a representative sample of rows to establish a persistent anchor of the dataset's semantics. This ensures that generated row embeddings are dynamically contextualized, resolving semantic ambiguities and anchoring representations in domain-specific context. Our experiments across several benchmarks (CARTE, TextTab, and TabArena) demonstrate that CASE substantially improves the performance of tabular learners on semantically rich datasets, particularly in low-data regimes.

Tabular model performance degrades when feature distributions change over time or the relationship between features and outcome variables change over time, known as data drift and concept drift, respectively. These issues are challenging to mitigate in real time because labeled data may not be immediately available, or re-training a model could be impractical. While tools exist to reduce drift, they are typically bespoke to neural network architectures and adapt how models are trained. In this paper, we offer an alternative post-hoc method to reduce concept drift, which is applicable to a variety of models, from trees to neural networks to tabular foundation models. This new tool is especially useful when constraints, such as high model accuracy, bounded inference time, or model size requires users to choose between different models for their specific use-cases. Our algorithm fits the base model separately on each labeled training period, measures how its parameters evolve against a single anchor model pooled over all of those periods, compresses those changes with a low-rank factorization, and extrapolates each latent factor forward with a damped, regularized forecast. On the 18-dataset Drift-Resilient TabPFN benchmark, evaluated under that benchmark's own protocol and metric, the extrapolation improves every base family it is applied to, and achieves performance competitive with the state-of-the-art Drift-Resilient TabPFN with seconds of training. In contrast, Drift-Resilient TabPFN requires pre-training on millions of synthetic datasets over approximately 1,300 GPU-hours, and is orders of magnitude slower in inference (depending on the model). In the discussion, we explore the promise and challenges of extending this tool to other modalities.

Tabular data is used extensively in many real-world use cases. Deep learning models have been developed to deal with tabular data, but generally perform poorly when the test data distribution differs from that of the training data. Researchers have proposed test-time adaptation approaches to deal with this problem. The fully test-time adaptation (FTTA) setting involves adapting deployed classifiers to shifted target distributions using only unlabeled test data. Leading FTTA methods inherit a batch-dependent approach from computer vision literature. This paper demonstrates for the first time that such approaches degrade sharply in strict streaming regimes where examples arrive and must be classified one at a time. This occurs because at a batch size of one, batch-level statistics become unavailable or poorly estimated. We argue that singleton tabular FTTA is not merely a small-batch variant of ordinary FTTA, but a distinct identifiability problem where only the location of the model's score stream remains directly observable. To address this, we propose Prequential Logit-Origin Centering (PLOC), a lightweight approach that keeps the source model frozen and shifts the logit space at each step. PLOC stores only a single running number (the mean of past logits), requires no labels, estimates no priors, and bypasses weight updates entirely. A deferred variant applies a static shift that preserves the source ranking, and thus the AUROC, exactly. Evaluated across five tabular benchmarks, three architectures (MLP, FT-Transformer, and TabTransformer), and five independent source checkpoints, PLOC significantly outperforms strong tabular and entropy-based baselines.

Data imbalance poses a major challenge in supervised classification, where the majority-class bias contributes to false negatives and overestimates classification accuracy. Unsupervised deep clustering can be immune to class imbalance because representation learning for clustering is performed without class labels. Deep clustering has been proposed for images, languages, and graphs, while its application to tabular data has only emerged recently. This paper is among the first to examine the performance of state-of-the-art deep clustering methods under varying levels of data imbalance. We introduce two novel cluster ensemble approaches: one aggregates deep clustering assignments across different embedding dimensions, and the other applies majority voting to the best-performing clustering algorithms. Experiments on 16 binary tabular datasets with varying and artificially induced levels of imbalance reveal distinct strengths of different deep clustering methods. On average, our ensemble methods outperform individual clustering methods in ACC, NMI, and ARI scores, offering greater resilience to data imbalance when identifying ground-truth classes without supervision. Therefore, in an imbalanced data scenario, deep clustering can serve as a strong alternative to supervised classification.

Tabular Foundation Models, such as TabPFN, have received a large amount of recent attention due to their performance on in-context tabular machine learning tasks, which often exceeds classical baselines. However, practical deployment considerations of these models has received less attention. In this paper we investigate the memory requirements for these models. We demonstrate that employing model compression approaches can enable memory reductions of up to 7.6 with similar levels of performance, reducing deployment requirements by nearly 87%. Our work provides insight to practitioners seeking efficient deployment of these models in practical settings.

TabPFN performs classification through in-context learning: it conditions on a set of labeled training rows (the context, or prototypes) and predicts test labels without gradient updates. On small tabular datasets, practitioners must still choose the context size and which rows constitute the context. We study how these choices affect prediction stability, accuracy, and selection cost using repeated context sampling on 15 OpenML datasets. Specifically, we investigate (i) whether larger contexts reduce prediction variability across random draws, (ii) whether accuracy depends on preserving the training distribution or on feature-space coverage, and (iii) whether expensive selection methods such as K-Means and farthest-point sampling provide benefits over uniform random sampling. We find that larger contexts are both more accurate and substantially more stable, with AUC coefficient of variation decreasing from roughly 6 to 18% at k=16 to 1 to 4% at larger context sizes on datasets with room for improvement. Although accuracy correlates with distribution representativeness in random contexts, controlled experiments show that matching feature means alone can reduce accuracy by up to 0.5 AUC because it reduces context diversity. Mixed-effects analysis identifies diversity and coverage, rather than feature-mean matching, as the stronger predictor of accuracy (diversity beta=+0.23, p=3x10^-12; feature-mean shift beta=-0.01, p=0.71). K-Means and farthest-point sampling achieve similar accuracy to random selection while requiring two to three orders of magnitude more selection cost. These results show that random sampling succeeds because it provides feature-space coverage in expectation, not because it reproduces the underlying data distribution.

Consider a model trained at a single hospital to predict patient recovery, where the measured feature $X$ bundles the patient's true health signal ($C$) with a systematic artefact from that hospital's equipment ($S$). Within that hospital, the artefact correlates with outcomes through unmeasured confounders such as patient demographics; an in-context learner rationally routes predictions through $S$, not $C$, and fails silently when deployed at a new hospital with different equipment. We formalise this as \emph{spurious routing in composite representations}: when a feature $X = [C;\,αS;\,η]$ encodes a causal signal $C$ and a spurious signal $S$ in distinct subspaces, the ICL cannot determine which drives predictions. We prove that under ridge ICL, a linear in-context learner, this routing is unavoidable regardless of context size; TabPFN, a state-of-the-art pretrained tabular ICL model, shows qualitatively consistent behaviour empirically. We derive a closed-form characterisation, $\mathrm{CSR} \propto ρ_S/ρ_C$, confirmed at $r = 0.997$ for linear ICL and $r = 0.979$ for TabPFN. Contrary to intuition, larger context sharpens commitment to the dominant in-context signal, amplifying spurious routing by up to $1.74\times$; in the high-spurious corner, more expressive models show greater vulnerability empirically ($+2.22$ CSR gap at high entanglement). We introduce two lightweight mitigations: environment-stratified context construction and S-swap augmentation, that require only weak environment labels and no knowledge of the causal partition. S-swap reduces spurious routing by $74\%$ for linear ICL and $98.8\%$ for TabPFN, with TabPFN's causal sensitivity increasing $8.4\times$ simultaneously: the model does not become agnostic, it reroutes through the causal signal.

Internet of Things (IoT) applications generate vast amounts of Correlated Time Series (CTS) data that often contain missing values and require imputation. Existing methods emphasize accuracy but often lack adaptability to changing IoT environments: they are vulnerable to sensor failures, cannot selectively impute only incomplete sensors, and use static architectures that do not adapt to resource availability. To address these limitations, we propose AdaCTSi, an adaptive CTS imputer for changing environments. AdaCTSi combines a One-shot Temporal Convolutional Network with a Learned Time-Sensor Index Table to extract and decouple complex spatio-temporal features into sensor-wise embeddings, enabling adaptation to varying sensor subsets. Sparse Spatial Attention efficiently extracts dynamic spatial correlations, while Correlation-Weighted Sensor Selection selects informative sensors to provide sufficient spatial context. Experiments with twelve baseline methods, three adaptability scenarios, and five benchmark datasets covering traffic, air quality, and trajectory data show that AdaCTSi reduces MAE by an average of 33.1% relative to the strongest baseline on each dataset. A single trained model supports sensor-subset and resource-adaptive inference, and its modest memory footprint enables deployment on commodity computing devices, including MCUs.

Automatic feature engineering (AutoFE) for tabular data requires discovering informative transformations from a large program space. Existing approaches suffer from three limitations: classical methods rely on fixed operator libraries with limited expressivity, LLM-based methods generate proposals from static prompts without retaining search experience, and evolutionary methods use fixed migration policies that ignore task-specific cross-family transfer utility. We introduce TOPOFE, a framework that formulates AutoFE as graph-structured multi-island evolutionary program search. The transformation space is partitioned into semantically coherent families, each explored by an island through LLM-guided mutation and crossover. Each island maintains a Prompt Adaptation Memory that accumulates accept/reject feedback to steer proposals toward productive regions without parameter updates. To coordinate global exploration, TOPOFE dynamically learns a directed topology graph whose edge weights encode transfer utility between transformation families. Cross-island transfer is triggered by adaptive saturation detection and performed through LLM-mediated hybrid synthesis, enabling discovery of compositional feature programs that cannot emerge from isolated local search. Experiments on 29 tabular datasets show that TOPOFE consistently outperforms most state-of-the-art AutoFE methods on classification and regression tasks. Beyond predictive performance, TOPOFE produces feature sets with lower redundancy and higher representational coverage, while the learned topology graph acquires meaningful task-specific transfer structure correlated with downstream gains. The discovered feature programs transfer reliably across diverse predictors and LLM backbones, demonstrating that improvements arise from TOPOFE's structured search and adaptive coordination rather than backbone-specific generation capability.

Dual-source trolleybuses alternate between overhead catenary supply and on-board battery operation, creating energy-use patterns driven by route attributes, high-frequency trajectories, and hourly weather. Existing models struggle to represent these heterogeneous inputs and rarely explain the causal drivers of consumption. This paper proposes a time-aware tabular deep learning framework for inter-stop energy management. Periodic time encoding is integrated into a parameter-efficient batch-ensemble backbone to jointly learn static and sequential features, while Bayesian optimization with tree-structured density estimation tunes hyperparameters. To move beyond prediction, a three-layer causal explanation pipeline combines feature attribution for marginal effects, a linear non-Gaussian acyclic model for causal direction discovery, and a meta-learner for net average treatment effects. Experiments on the Zurich trolleybus dataset enriched with meteorological records achieve a MAPE of 6.52% and R of 0.982, outperforming ten statistical, tree-ensemble, and deep learning baselines. Ablation results show that periodic time encoding contributes most to the accuracy gain. Causal analysis identifies regenerative braking ratio and average speed as the strongest energy-saving factors, while coasting distance is the main driver of excess consumption. The findings offer actionable thresholds for vehicle technology, driving behavior, capacity allocation, and catenary network planning.

Tabular learning is still dominated by gradient-boosted decision trees (GBDTs), while recent deep learning approaches have become increasingly competitive. However, applying deep tabular models to large-scale datasets remains challenging, as large sample sizes, high feature dimensionality, or many target classes can introduce substantial computational cost. We propose TabLoRA, a parameter-efficient trainable neural ensemble for large-scale tabular learning. Instead of using fully independent ensemble backbones, TabLoRA shares a common backbone across predictors and introduces predictor-specific low-rank adaptations, enabling ensemble-style prediction without full parameter duplication. Across benchmarks, TabLoRA achieves a favorable balance between predictive performance and practical efficiency compared with GBDT methods and recent deep learning baselines under the same resource constraints. Memory analysis and ablation studies further show that the proposed design improves the feasibility of neural ensemble learning while preserving much of the benefit of full ensembles.

Multimodal learning usually requires a dedicated encoder per modality. When a tabular modality is involved, prior work has been mostly using a \emph{plain MLP} as the encoder. Yet if it were a strong encoder, the tabular domain would not be ``the last unconquered castle for deep learning''. This study evaluates state-of-the-art tabular models as encoders in the image-tabular setting for the first time. An obstacle stands out. In-Context Learning models, among the best performing methods in the tabular domain, require labels to process instances, making it non-trivial to embed training and test instances the same way. We addressed this problem across multiple models of this family. With this study, we would like to highlight the importance of encoder factor in the multimodal learning.

Inherently interpretable classifiers for tabular data typically rely on sparse features, rules, or patterns that users can inspect directly. The marginal feature-screening step common to these methods can discard variables whose predictive value emerges only through joint configurations with other variables. We present Interaction Aware Interpretable Machine Learning (IAIML), a framework that addresses this limitation through three coordinated mechanisms: adaptive per-feature discretization, finite-grid pairwise interaction scoring, and a partitioned explanation budget. Detected interactions are routed through one of two strategies: relaxing the screening filter so that interaction-supported variables enter the pattern search, or constructing explicit pair terms for a sparse downstream classifier. On a 40-dataset panel comprising 24 real-world tabular benchmarks and 16 synthetic interaction stress tests, evaluated under nested cross-validation, IAIML achieves mean AUC within 1.4 points of tuned gradient-boosted ensembles while requiring roughly 14--28 times fewer fitted explanation components. On datasets with strong pairwise interaction structure and low marginal signal, IAIML outperforms all baselines. Among compact interpretable methods, IAIML is comparable to RuleFit in AUC and component count and is less expensive to tune. EBM obtains a small but significant AUC advantage across the full panel, with a substantially larger lookup-table footprint. Performance degrades on datasets requiring higher-order interactions beyond the pairwise scope. Component-isolated ablations confirm that adaptive discretization and interaction-aware admission each contribute incrementally. These results support IAIML as a compact, interaction-aware framework appropriate for settings where bounded explanation size and controlled treatment of feature interactions are design requirements.

In deep learning for tabular data, efficient ensembles of multilayer perceptrons (MLPs) have recently emerged as effective and practical architectures. Existing methods of this kind use the same hyperparameters for all underlying MLPs, which requires hyperparameter tuning for achieving the best performance. In this work, we introduce TabPack, an efficient MLP ensemble with strong out-of-the-box performance and reduced reliance on traditional tuning. In a single run, TabPack samples and trains many MLPs with different hyperparameters efficiently in parallel and selects ensemble members on the fly during training. Thus, TabPack only requires specifying ranges from which to sample MLP hyperparameter rather than exact hyperparameter values, which naturally demands less precision for good performance. In experiments on medium-to-large public datasets, TabPack with default settings performs on par with extensively tuned prior methods, thus substantially reducing effort and compute resources needed to achieve competitive results on tabular tasks. Notably, running the default TabPack configuration on a modern MacBook took less time than tuning some baselines on an industry-grade GPU.

Parallel ensemble methods were compared on $56$ small-to-medium tabular classification tasks drawn from OpenML CC18. A set of ``best practice'' recommendations on the use of ensemble methods was derived from these observations. It was later validated on 28 additional tasks using TabArena's precomputed data, where the recommendation set significantly outperformed Single Best and matched or exceeded individual ensemble methods. Two key observations were made. First, Blending and Stacking are inconsistent, but their inconsistencies are independent and happen on different tasks. Second, while Hard Voting's probabilistic classification is rather weak, a consequence of using vote proportions as posterior estimates, Robust Soft Voting's probabilistic classification is particularly successful, especially in the multiclass case.

Learning from few labeled examples is a central challenge in tabular machine learning, and it becomes the binding constraint in domains where labeling is costly, such as crowd monitoring during Hajj and Umrah. Tabular foundation models, which predict from only a handful of examples without task-specific training, were recently introduced to address this very-few-label regime. In this study we test them on crowd-state classification to assess how much they help when labels are scarce, and we compare them against standard machine learning methods to characterize the accuracy and efficiency trade-offs between the two approaches. Using three real datasets we evaluate different machine learning models, in untuned and tuned forms, against three foundation models. Results show that no single family is best everywhere. The right choice depends on the label budget. When labels are very few, foundation models lead. As labels grow, tuned conventional models catch up and significantly surpass the foundation models on the more structural geometry target. Efficiency separates them further where tuned machine learning models incur a large tuning cost that foundation models avoid, although foundation models reprocess their context at every prediction. We summarize these results as a practical map of which approach to prefer under a given label budget and computational budget.

Relational databases (RDBs) are the primary data infrastructure in many enterprises, yet recent deep learning methods designed for RDBs have been evaluated under inconsistent experimental protocols, making fair comparison difficult. We present one of the first systematic benchmarking studies of recently released deep learning methods for RDBs, evaluating them across five relational databases, with one classification and one regression task for each. We refactor all deep RDB models to allow the full range of experimental procedures to be applied consistently across all methods. Our findings indicate that the relational transformer (RT) approach delivers the strongest overall performance on both classification and regression tasks compared to the state-of-the-art graph-based modeling and learning of RDBs. Even for single-table learning tasks, deep learning methods designed for RDBs outperform the leading tabular foundation model, TabPFN 2.5. Extending learning from a single table (hop = 0) to multiple tables (hop = 1, 2) by connecting neighboring tables in relational databases enhances performance, but the additional benefit from higher hops diminishes as computational overhead grows. Deep RDB learning methods have the potential to challenge state-of-the-art tabular foundation models, especially on large-scale enterprise data. The source code for this benchmarking study is publicly available.

Tabular foundation models enable accurate in-context learning (ICL) from small labeled datasets, but the private records placed in context can leak through model predictions. We first show that even basic membership inference attacks succeed against tabular ICL, motivating formal privacy protection. We then introduce TabPATE, a differentially private PATE-style defense for tabular ICL that does not require public in-distribution data. TabPATE partitions the private context across teacher models, privately aggregates their labels on synthetic tabular queries, and releases the resulting labeled queries as a student context. Because tabular features are bounded and relatively low-dimensional, useful queries can be generated from feature ranges alone or from lightly privatized marginals. Across tabular benchmarks, TabPATE preserves competitive utility while reducing membership inference to near-random success, providing a practical path to private tabular ICL without public data.

Large tabular models (LTMs), i.e., tabular foundation models leveraging in-context learning (ICL), achieve state-of-the-art performance on tabular tasks. While LLMs are known to unintentionally memorize training data, the memorization dynamics of LTMs remain largely unexplored. We investigate the potential for parametric memorization in tabular ICL. We introduce ICLMEM, a probing framework designed to separate context-based predictions from parametric memorization. Our zero-information multiple-choice context strips away valid contextual patterns to force the model to fall back on its parametric memory. Our controlled fine-tuning setup establishes membership ground truth and accounts for common pitfalls, e.g., distribution shift, feature contamination, base-rate fallacy, and the pre-trained base model acts as reference to calibrate for sample difficulty. Our controlled evaluation on a leading real-world-trained LTM detects moderate memorization signals in 8 out of 10 tasks ($\text{AUC}$ up to $0.67$ and TPR at $1\%$ FPR $>0.1$). Notably, memorization signals are strongest for low-cardinality and binary tasks. However, they largely vanish under realistic training conditions. Our findings show LTM memorization signals under specific circumstances (single-task fine-tuning with fixed samples across many epochs and small query size). To protect sensitive data, appropriate measures must be taken, which we discuss.

Predicting biomolecular properties from limited labeled data is a central bottleneck in protein engineering and small-molecule design. As strong pretrained encoders now supply rich fixed-length representations, the difficulty has shifted from representation learning to building a data-efficient predictor for the few-shot regime. Tabular foundation models such as TabPFN and TabICL are unlikely candidates for this role: they are in-context learners pretrained on synthetic tables drawn from random causal graphs, a generative prior with no obvious correspondence to the processes that produce protein sequences or molecular graphs. That this tabular, causal inductive bias should transfer to biomolecular data at all is counter-intuitive, yet we find it does. Treating each method as a predictor-representation pair, we evaluate across two domains. We find that on protein fitness regression tasks these in-context learning models coupled with ESM Cambrian representations achieve or exceed state-of-the-art results on ProteinGym, and outperform task-specific supervised regressors on a diverse esterase catalytic activity dataset. For small-molecule classification with ECFP/RDKit descriptors, no single predictor-representation pairing dominates across TDC ADMET, MoleculeNet, FS-Mol, and DrugOOD, but they are competitive with the existing task-specific state-of-the-art. Crucially, on both protein and small-molecule few-shot tasks, these predictor-representation pairs offer strong performance. We conclude that tabular foundation models can be strong biomolecular predictors, but only when coupled with expressive representations.

We introduce FlexTab, a flexible encoder-decoder architecture for in-context learning on tabular data that pairs a single, task-agnostic encoder with a suite of task-specific decoders. Unlike existing tabular in-context learners, which entangle feature representations with a specific prediction target, our design produces target-agnostic row embeddings that can be leveraged across a wide range of downstream tasks within a table-native in-context learning setup. We demonstrate this flexibility on six distinct problems: classification, regression, anomaly detection, clustering, entity matching, and entity classification in relational databases. Both the encoder and the task-specific decoders are trained on a large corpus of real-world, unlabeled tables. FlexTab achieves state-of-the-art performance on classification, regression, anomaly detection and entity matching, while remaining competitive with specialized models on entity classification in a relational setting. These results demonstrate that a single shared encoder, paired with task-specific decoders, can serve as an effective general-purpose backbone for diverse tabular prediction problems. The inference code and checkpoints will be made publicly available at https://github.com/SAP-samples/flextab.

Structured tabular data dominates clinical medicine, yet existing benchmarks fail to reflect real-world properties like complex survey sampling, demographic oversampling, and subgroup fairness. We introduce the NHANES Accelerometry Cardiometabolic Benchmark, derived from NHANES 2003-2006, comprising 1,381 adults with hip-worn accelerometry, fasting laboratory biomarkers, dietary intake, and anthropometrics. We evaluate three tabular learning methods -- ridge regression, XGBoost, and the foundation model TabPFN v2 -- to predict glycated haemoglobin (HbA1c), fasting triglycerides, and C-reactive protein (CRP) from activity phenotypes and lifestyle covariates. TabPFN v2 achieves the best overall performance (HbA1c R^2=0.156, CRP R^2=0.383), while triglycerides remain largely unpredictable (R^2 < 0.05), consistent with known genetic dominance. We apply split conformal prediction to generate distribution-free 90% prediction intervals and evaluate demographic coverage equity across sex and race/ethnicity subgroups. Marginal coverage aligns with the 90% target for CRP and HbA1c but falls below for triglycerides. At the subgroup level, we observe localized undercoverage (e.g., HbA1c for Mexican American participants), illustrating the gap between marginal guarantees and the conditional coverage required for clinical fairness. Code and data are at https://github.com/felizzi/nhanes-accel-cardiometabolic-benchmark.

Unsupervised tabular anomaly detection requires methods that are accurate, robust across heterogeneous datasets, and computationally efficient. Classical statistical detectors are often efficient, but they usually rely on a fixed data view and a single notion of abnormality. Deep anomaly detectors can learn more flexible scoring functions, but they are substantially slower and difficult to tune in unsupervised settings due to the lack of a reliable supervisory signal. We propose RGLD, a randomized global-local density estimator for efficient unsupervised tabular anomaly detection. RGLD combines a global random-feature density branch, which identifies samples in broadly low-density regions, with a local neighbor branch, which detects samples that are weakly supported by nearby observations. Both branches operate over feature-bagged randomized views, allowing RGLD to expose anomaly evidence that may be hidden in any single representation. We conduct experiments on 47 tabular datasets against 23 statistical and deep anomaly detection baselines under fully unsupervised setting. RGLD achieves the strongest dataset-level AUROC performance, ranking 1st in dataset wins, and ranks 2nd in AUPRC wins. RGLD is also faster than all evaluated deep detectors, achieving 50x-580x speedups, and remains competitive with statistical methods in runtime, yielding a favorable accuracy-efficiency tradeoff.

Tabular classification is often governed by local, condition-triggered rules rather than smooth global patterns. However, tabular deep neural networks (DNNs) are typically built upon Euclidean representations that favor smooth variations and semantic locality. This potential geometric mismatch can make it challenging for tabular DNNs to efficiently represent the discrete, rule-partitioned structures often underlying tabular classification. To address this issue, we propose HDE-Net, a manifold-constrained DNN that enables hierarchical decision modeling in hyperbolic space. We first abstract heterogeneous features into unified Latent Decision Nodes (LDNs) and embed them in the Poincaré ball, forming a continuous representation that resembles tree-structured reasoning. For numerical features, we introduce a Soft Decision Routing mechanism that approximates range-based local rules in a differentiable manner, bringing their LDN semantics closer to those of categorical features. An entropy-aware capacity allocation algorithm further adapts the number of LDNs per numerical feature to balance expressiveness and complexity. On the TALENT-tiny-core classification benchmark (30 datasets), HDE-Net achieves the \textit{best average rank}, outperforming both industrial GBDTs and recent tabular DNNs while maintaining high efficiency.

Relational Deep Learning (RDL) models multi-tabular databases as temporal heterogeneous graphs for end-to-end representation learning. While RDL is evolving rapidly, existing approaches face significant generalization obstacles. They are either schema-specific, requiring training from scratch for every new database, or they rely on monolithic architectures that entangle feature encoding with graph message-passing. Analyzing these limitations, we establish four core pillars for building foundational relational models: semantic granularity, structural topology, temporal causality, and unified optimization. Addressing these pillars, we propose a modular approach that decouples row encoding from graph message-passing. We introduce the Universal Row Encoder, a transformer-based module that integrates raw cell data with schema metadata$-$including column semantics, table names, and global distribution statistics$-$to produce table-width invariant row embeddings. By explicitly feeding global statistics to an intra-row self-attention mechanism, the encoder natively contextualizes unseen features and handles sparse data. Serving as a flexible "backend" for any downstream graph architecture, our pretrained encoder enhances cross-database knowledge transfer on the established RelBench benchmarks while improving learning convergence and memory footprint.

Bayesian predictive inference provides a principled framework for uncertainty quantification, data efficiency, and robust generalization. However, exact inference is often intractable, and scalable approximations may remain computationally expensive or require restrictive modeling assumptions that degrade predictive performance. Prior-Data Fitted and in-context models have recently emerged as an amortized alternative by learning to map datasets directly to predictive distributions, but existing approaches are tightly coupled to the support of the training prior and lack explicit mechanisms for adapting to new priors at test time, resulting in limited robustness under distribution shift. We introduce a multi-task in-context learning framework for amortized hierarchical Bayesian predictive inference that explicitly represents prior information as a prefix of in-context datasets. A transformer trained on sequences of prior and target tasks learns to adapt its predictions across families of priors. On a suite of evaluations with increasing difficulty, including out-of-meta-distribution priors and priors with high-dimensional latent structures, our method matches oracle Bayesian predictors while being orders of magnitude faster. We further demonstrate its practical relevance on a real-world spatiotemporal temperature prediction benchmark. Code is available at https://github.com/martianmartina/multi-task-bayesian-icl/.

Medical tabular data are ubiquitous in clinical research, but deep learning for tables remains underexplored because reliable labels often require costly expert adjudication, even though structured clinical variables are routinely available in tabular form. Self-supervised learning can leverage these unlabeled tables, and recent binning-based pretexts offer a promising inductive bias, but existing objectives fix a single global quantile discretization and apply feature-agnostic supervision. We propose Adaptive Binning, a training-adaptive discretization pretext for tabular SSL that couples discretization to learning through a feature-wise coarse-to-fine curriculum. Motivated by the spectral bias of neural networks and the principles of curriculum learning, our method progressively refines discretization per feature upon plateau detection and selects representation-aware splits to jointly improve value-space concentration and representation-space coherence. A heterogeneity-aware objective unifies categorical reconstruction with ordinal supervision for numerical features, and experiments on public medical tabular datasets under unified evaluation protocols show consistent gains for linear probing and fine-tuning without dataset-specific discretization tuning. We further introduce a medical tabular SSL benchmark with standardized protocols to support reproducible progress in this underexplored domain. Our code is available at https://github.com/labhai/Adaptive-Binning.

Tabular stream learning requires predictions on sequentially arriving examples under distribution shift. While standard methods adapt by updating model states, tabular foundation models (TFMs) make predictions conditioned on a labeled context in an in-context manner, making them a natural alternative for stream learning. This shifts the challenge from how to update the model to how to manage the context. We propose a future information view that yields three practical requirements for context management: preserve recent examples, retain uncertain examples, and remove redundant examples. We instantiate these requirements as CURE (Context management via Uncertainty-aware admission and Redundancy aware Eviction), a context-managing policy with entropy-gated admission and redundancy-aware eviction. Across seven streams, CURE shows up to 27.0% relative improvement over classical stream learners, remains robust across multiple TFM backbones, and ranks first among other policy variants. Code and datasets are available at https://github.com/morcellinus/CURE-ICML-FMSD.

Multi-task table recognition jointly addresses table structure prediction, cell localization, and cell content recognition within a unified framework. Existing approaches often rely on autoregressive decoders to generate table structures and reuse their hidden states for cell localization and content recognition. This autoregressive generation process can make cell representations order-dependent, degrading global consistency across cells. This paper proposes a structural refinement module that produces order-independent cell features through non-causal attention. This design enables parallel inference of cell contents while conditioning each cell on global context encoded in the refined features. Experiments on two large datasets demonstrate consistent gains in cell localization and end-to-end recognition, while reducing overall inference time by around threefold.

Continual anomaly detection in tabular data is challenging and remains largely underexplored, particularly in settings with heterogeneous feature schemas, distribution shifts, and severe class imbalance. In many real-world applications, data arrive sequentially from diverse domains, rendering conventional continual learning methods ineffective due to their reliance on a fixed input space. We propose a continual learning (CL) method, which can overcome these challenges and continually learn from different tasks. Our method consists of three main parts: our AGF model, Taskfusion augmentation, and outlier exposure. The AGF-model maps task-specific features into a shared space, then aligns distributions to reduce representation drift, and learns anomaly decision boundaries in the aligned space. To improve stability, we introduce Taskfusion augmentation, combining boundary-aware interpolation within tasks to refine the model anomaly boundaries and cross-task mixing to transfer anomaly structure across datasets. To handle class imbalance and memory constraints, we employ tabular dataset distillation to store compact synthetic replay samples, which are jointly used with augmented data in an outlier exposure objective for robust anomaly detection. We evaluate the approach on 21 heterogeneous datasets across multiple domains. Results show that our approach substantially improves continual anomaly detection performance over sequential fine-tuning and other CL baselines while reducing catastrophic forgetting and maintaining stable detection across heterogeneous datasets.

Tabular-image multimodal learning aims to improve predictive modeling by jointly using structured tabular attributes and visual data. Although pretrained encoders provide strong modality-specific representations, full fine-tuning can be computationally expensive, while keeping encoders frozen may limit task-specific adaptation. We propose the Tabular-Image Adapter (TI-Adapter), a modality-specific adapter-based fine-tuning framework for efficient multimodal adaptation. TI-Adapter freezes the pretrained tabular encoder and learns an adapter after the extracted tabular embedding, while adapting the image branch with embedding-level and bottleneck-level adapters instead of full fine-tuning. Experiments on 20 tabular-image datasets show that TI-Adapter achieves competitive or better predictive performance than full fine-tuning while using substantially fewer trainable parameters. Ablation studies further demonstrate the importance of adapter placement for balancing performance and practical efficiency.

Few-shot tabular learning provides a cost-effective approach for real-world applications where annotation is costly and collecting sufficient samples for new tasks is difficult. Existing Traditional and LLM-based methods have demonstrated effectiveness in few-shot scenarios. However, traditional methods need additional training on unlabeled or generated data, which incur significant computational overhead. In addition, LLM-based methods that directly feed raw tabular data into LLMs raise privacy and compliance concerns. More importantly, both paradigms largely overlook the semantic relationships between features, which provide structural and semantic prior for constructing a semantic graph. Semantic graph is essential for modeling meaningful feature interactions in few-shot scenarios. In this paper, we propose TAROT, a GNN-based framework that encodes the structural and semantic prior by constructing and refining a task-adaptive semantic graph from this prior, thereby improving predictive performance in few-shot tabular learning. TAROT first encodes heterogeneous tabular data into unified node semantic representations via a Unified Semantic Tabular Node Encoder (USTNE). Then, it prompts LLMs to infer the semantic relationship between features based on the task description and feature names to construct a semantic graph. To mitigate structural noise introduced by the hallucination of LLMs, TAROT introduces Task-adaptive Semantic Graph Refinement that prunes spurious or task-unrelated edges and adds missing task-related ones, aligning the graph structure with the downstream objective. Finally, a GNN performs message passing over the refined graph to capture task-related semantic dependencies for prediction. Extensive experiments on various few-shot tabular learning benchmarks demonstrate the superior performance of TAROT, establishing it as a state-of-the-art approach in this domain.

Tabular encoders are usually evaluated inside task-specific end-to-end pipelines, so models from different training paradigms are difficult to compare directly even when they operate on similar tabular signals. We introduce TRL-Bench, a multi-granular tabular representation learning (TRL) benchmark that standardizes cross-paradigm representation-level evaluation: each encoder exports row-, column-, or table embeddings through its supported wrapper, and shared lightweight heads probe them across three suites: TRL-CTbench (column/table), TRL-Rbench (row), and TRL-DLTE (compositional Data-Lake Table Enrichment spanning all three granularities). To support this standardized setting, we release curated benchmark assets and task reformulations, including 50 OpenML tables with 123 verified targets, 16 row-pair linkage rewrites, and a 47,772-table DLTE lake derived from 1,379 parent tables. Across 20 models and 16 tasks, TRL-Bench shows that once downstream conditions are standardized, encoder quality is capability-specific rather than captured by a single leaderboard. In TRL-CTbench, generic text encoders often lead on tasks with strong surface-text signal, while tabular specialists win where their pretraining objective aligns with the task. In TRL-Rbench, within-table prediction and cross-table linkage favor different training regimes, with atomic linkage performance correlating strongly with the row-matching stage of DLTE pipelines. In TRL-DLTE, the strongest pipelines combine capability-matched specialists rather than reuse a single encoder, and top end-to-end quality depends on non-additive compositional fit rather than per-stage marginal rank alone. TRL-Bench provides a common protocol for measuring reusable signal in exported tabular representations under shared downstream conditions. Code and data: https://github.com/LOGO-CUHKSZ/TRL-Bench

Schema matching, a critical task for integrating data from diverse sources, seeks to identify correspondences between columns across different schemas. In multi-table holistic schema matching, columns with similar semantic meaning may reside in tables with different contexts due to heterogeneous schema designs, where similarity-based techniques are inadequate. The focus of this paper is exploiting referential context into schema matching by introducing RACT learning and prediction, a self-supervised framework enabling the probabilistic retrieval of candidate tables for source columns to constrain relevant column candidates. Experiments demonstrate that this approach outperforms similarity-based baselines on matching multi-table schemas. In subsequent matching experiments, constraining the column search space via top-t tables improves both average matching precision and completeness by up to +70%.

Background: Since 1990 many feature selection methods have been proposed across heterogeneous applications. To validate the usefulness of a new method, it needs to be compared against at least one baseline method from the existing literature on a feature selection task using at least one dataset. Recent developments in tabular Deep Learning (DL) and data valuation in Machine Learning (ML) suggest that the evaluation of new methods, algorithms, and models may be consciously or unconsciously biased. We hypothesise that a similar trend exists in feature selection (FS), particularly in filter feature selection (FFS). The aim of this study is therefore to examine FFS studies to identify factors that influence the evaluation and that might consist entry point for biases in order to recommend stronger principles for FFS evaluation. Methods: We analyse a sample of 28 high profile FFS studies published between 1994 and 2025. The analysis provides reflections on how to examine FFS studies, highlights lessons learned throughout the process, and gives five evidence-based recommendations for future FFS evaluation. Results: Multivariate Linear Regression analysis achieved a score of $R^2=0.33$. It means that 33% of the variance in the performance of new methods against chosen baselines (win rate) is explained by the number of datasets (#Datasets), the number of baselines (#Baselines), and the number of new methods (#NewMethods). Discussion: $R^2=0.33$ is considered medium explanation; which is promising given that this is the first such study. The medium explanation result is due to the fact that win rate is influenced by additional factors such as the maturity of the feature selection domain, the type of datasets and baselines, and the simplicity of the regression model used to explain the relationship.

Real estate valuation is a structured regression problem in which prices are governed by heterogeneous feature types, sparse regional effects, nonlinear interactions, and the practical logic of comparable properties. Standard multilayer perceptrons treat each row as an isolated vector and must learn locality, scale sensitivity, and categorical matching from supervision alone. Gradient-boosted decision trees provide strong tabular baselines, but their feature-centric splitting mechanism does not explicitly model the retrieval of similar historical observations. This paper presents RowNet, a retrieval-based neural architecture for real estate price-per-square-meter prediction. RowNet represents a query property through pairwise similarity features against a memory bank of labeled properties. A first retrieval layer estimates a coarse target from feature-only similarities. A second layer augments the memory comparison with target-consistency features and uses multiple learned attention heads to retrieve complementary comparable sets. A final mixture-of-experts module combines learned gating, residual correction, entropy regularization, and head-diversity regularization to produce the prediction.

Relational databases underpin modern enterprise, scientific, and healthcare systems, yet predictive machine learning on such data remains challenging due to their multi-table, heterogeneous, and temporal structure. Relational Deep Learning (RDL) addresses this by representing databases as heterogeneous graphs and applying graph neural networks (GNNs) directly. RelBench v2 recently introduced autocomplete tasks -- a practically motivated task type where the goal is to predict an existing column value from relational context, analogous to an intelligent form-filling assistant. We propose RelGT-AC (Relational Graph Transformer for Autocomplete), extending the RelGT architecture with three targeted contributions: (1) a column masking strategy that prevents trivial solutions by masking the target column during subgraph encoding; (2) a unified task head supporting binary classification, multiclass classification, and regression autocomplete tasks within a single model; and (3) a TF-IDF text encoder that automatically detects and encodes free-text columns, recovering strong lexical signal that categorical encoders discard. Across 7 tasks spanning 3 RelBench v2 datasets (rel-trial, rel-f1, rel-stack), RelGT-AC outperforms the GraphSAGE baseline on all 3 regression autocomplete tasks and achieves up to +10 AUROC points on text-heavy eligibility tasks via the TF-IDF encoder.

Progress in tabular machine learning has largely focused on increasingly sophisticated model architectures. At the same time, feature engineering remains a critical yet underexplored component of real-world modeling pipelines that is entirely absent from modern benchmarks, which creates an unquantified evaluation gap. In this work, we introduce TabPrep, a lightweight preprocessing pipeline composed of feature generators that are carefully designed to target three specific structural data patterns. We show that many widely used model classes exhibit predictable blind spots to these patterns and that systematic feature engineering alone can establish new peak performance. Across the TabArena benchmark, integrating TabPrep into model training and tuning consistently improves performance for tree-based, neural, linear, and foundation models, often surpassing gains achieved by model-centric innovations alone. TabPrep outperforms previous automated feature engineering approaches in performance, efficiency, and applicability across datasets, enabling integration into large-scale benchmarks. By releasing TabPrep (see https://github.com/atschalz/tabprep), we enable researchers to integrate feature engineering into their benchmarking setup, filling a longstanding gap in tabular evaluations.

Real-world domains often contain heterogeneous tables whose headers vary while their underlying attribute semantics are shared, making it difficult to induce domain-specialized semantics from table-local evidence alone. Existing encoders model parts of this problem, but often underuse column-level value distributions and apply uniform objectives across attributes with different semantic roles. We propose NAVI, a segment-centric pretraining framework that treats each header-value pair as the unit for aggregating schema-level structural evidence and column-level distributional evidence. We realize this design through Masked Segment Modeling and Entropy-driven Segment Alignment, which jointly enforce structured header-value coupling and semantic alignment across stable and instance-specific attributes. Experiments on heterogeneous in-domain tables show improved reconstruction, semantic consistency, and downstream utility across evaluation settings overall.

As predictive models are increasingly deployed in high-stakes settings such as credit approval, there is a growing need for post-hoc methods that provide recourse to affected individuals. Many such models operate on tabular data, where features correspond to real-world attributes. Recently, in-context learning (ICL) has enabled large language models to perform tabular prediction by conditioning on labeled examples at inference time, without explicit training. However, algorithmic recourse for tabular decision-making under ICL remains largely unexplored. In this work, we present the first study of algorithmic recourse for tabular data under ICL. We carry out a theoretical analysis, showing that recourse remains well-defined and bounded, and we characterize how recourse converges toward classical solutions as the context size increases. In practice, we propose a novel zeroth-order recourse framework, Adaptive Subspace Recourse for In-Context Learning (ASR-ICL), that efficiently generates actionable and sparse recourse for black-box ICL models. The proposed framework naturally extends to multi-class tabular tasks. Experiments across multiple real-world datasets and models demonstrate that ASR-ICL achieves recourse quality comparable to existing methods with fewer queries and empirically confirm the predicted convergence behavior, supporting our theoretical analysis.

Schema matching is a fundamental step in integrating heterogeneous data sources. While Pre-trained Language Models (PLMs) have revolutionized this task by capturing linguistic semantics, they typically process tabular data as serialized text sequences of standalone column descriptions. This serialization discards critical structural information -- specifically, the row-level co-occurrences, i.e. the relational context -- forcing models to rely solely on column header semantics or standalone distributions. To bridge this gap, we propose SemStruct, a framework that joins the semantic power of frozen PLMs with the structural inductive bias of Graph Neural Networks (GNNs). We model the table as a heterogeneous graph where columns and values are nodes connected by rows, allowing the GNN to propagate disambiguating context across the structure. Unlike other state-of-the-art methods that require proprietary LLM access and fine-tuning of language models, SemStruct keeps the language model frozen and trains only a lightweight structural encoder. Extensive experiments on the Valentine and SOTAB-SM benchmarks demonstrate that SemStruct achieves state-of-the-art performance, outperforming fully fine-tuned baselines on complex, semantically joinable datasets. Furthermore, our ablation studies reveal that row representations serve primarily as topological conduits rather than semantic entities, validating the necessity of explicit structural modeling in schema matching.

Selecting which instances to label is a key challenge in low-label tabular learning. For recent Tabular Foundation Models such as TabPFN, context selection directly determines predictive performance. Supervised oracle experiments show that carefully chosen labeled context sets can strongly outperform random selection under the same labeling budget. However, the cold-start setting, where instances must be selected before any labels are available, has received little attention in the TFM literature. This problem is fundamentally geometric. In vision and language, foundation models induce embedding spaces where simple geometric selection methods are effective. In contrast, tabular instance selection has so far been performed predominantly in the original tabular space, which lacks a natural metric; heterogeneous types, mixed scales, and nonlinear interactions make raw-space distances unreliable for context construction, and original-space selection falls below random on the majority of datasets as the budget grows. We propose LUCoS (Latent Unsupervised Context Selection), which replaces raw-feature geometry with the latent geometry induced by embeddings from an unsupervised Prior-Fitted Network (PFN) and selects representative medoids as context. Evaluated on 67 OpenML-CC18 datasets across six low-label budgets, LUCoS ranks first under mean AUC, ACC, and F1, with conclusions stable across metrics and dataset-level robustness checks. A gain decomposition reveals a simple mechanism: at the smallest budgets, the main benefit comes from enforcing coverage; as the budget increases, the decisive factor becomes the representation space in which coverage is measured. LUCoS mitigates failures of original feature space selection, showing that reliable unsupervised context selection depends less on selector sophistication than on defining representativeness in a meaningful representation geometry.

Childhood anemia affects around 40% of children aged 6-59 months globally and arises from heterogeneous factors, limiting model generalizability. We evaluate a transformer-based tabular foundation model against classical supervised methods under cross-country and data-scarce settings. We used DHS data from 16 countries across Africa, Asia, Latin America, the Caucasus, and the Middle East (n=68,856). We compared Logistic Regression, XGBoost, LightGBM, and TabPFN v2.6. Performance was assessed using AUC-ROC, Brier score, and ECE. Generalization was evaluated using leave-one-country-out (LOCO), reverse-LOCO, and few-shot settings. Subgroup analyses included sex, age, residence, maternal education, and wealth. Feature importance was estimated using SHAP. TabPFN outperformed classical models in low-data regimes (<200 samples), showing higher discrimination and better calibration. Across countries, it achieved the lowest Brier score (0.042) and ECE (0.203). Under full-data settings, AUC-ROC ranged from 0.59-0.76 with small between-model differences ($\leq 0.05$). LOCO performance was stable (0.58-0.69), driven by country context. Reverse-LOCO showed asymmetric transferability. Subgroup performance was consistent with no systematic demographic bias. SHAP identified child age, altitude, and height-for-age z-score as dominant predictors, followed by wealth and maternal education. Performance in childhood anemia prediction is driven more by population variation than model choice. TabPFN provides advantages in low-resource settings through improved discrimination and calibration, highlighting foundation models as promising tools for data-scarce global health prediction.

Supervised classification on tabular data remains a central machine learning task, but its dependence on large labeled datasets limits its applicability in data-scarce settings. Few-shot methods such as TabPFN achieve strong performance through large-scale synthetic pretraining, yet still require labeled context examples. Large Language Models (LLMs) offer a more flexible alternative through zero- and few-shot in-context learning from task descriptions, but their behavior on tabular data remains inconsistent. We introduce LLMTabBench, a benchmark for evaluating LLMs on tabular classification under low-data conditions. The benchmark studies how LLM prior knowledge interacts with task descriptions and few-shot examples, and how performance changes with increasing data complexity across real-world and controlled synthetic datasets. We find that LLMs can be highly competitive in zero-shot settings, sometimes outperforming models given few-shot examples. However, additional examples may conflict with prior knowledge, thereby degrading performance. We also observe a complexity threshold at which LLM performance declines and few-shot examples become less useful. These results clarify key limits of in-context learning for tabular data and inform the deployment of LLMs in low-data regimes.

Deep learning over relational databases is conventionally realized by translating data into graph representations and applying graph-based neural networks within external frameworks. This round-trip between the database and external machine learning (ML) systems introduces non-trivial engineering overhead. In effect, these graph neural networks operate on tuple embeddings and manipulate them in ways that capture the interactions induced by relational joins. Given this natural correspondence, there is no fundamental reason why specifying a neural network over relational data should be substantially harder than querying it. We propose an approach that naturally integrates deep learning with database queries. The key idea is to associate each tuple with provenance, represented as a vector embedding with learnable parameters. Queries are lifted to operate jointly on data and embeddings, mapping input relations with embedded tuples to output relations with embedded tuples. This approach provides a declarative foundation for relational deep learning, facilitating integration with database systems, optimization, and wide adoption. We describe RelaNN, a proof-of-concept implementation of this approach built on top of PyTorch and cuDF. We illustrate the utility of RelaNN by implementing various graph-learning models, including graph convolutional networks, heterogeneous graph transformers, hypergraph neural networks and deep homomorphism networks. The simplicity of the programs and their competitive runtime performance demonstrate a concrete path toward making the implementation of state-of-the-art neural networks over databases as simple as writing a query.