Electroencephalography

Low-density EEG is more suitable for wearable and IoT-based brain sensing, but sparse electrode sampling often lacks sufficient spatial information to characterize cross-regional neural activity. EEG spatial super-resolution aims to recover dense-channel EEG from sparse recordings, yet remains challenging because channel missingness typically occurs at the whole-channel level, spatiotemporal dependencies over the full electrode layout are often underexplored, and the mapping from sparse to dense signals is inherently ambiguous. To address these issues, we propose TGSD, a topology-guided state-space diffusion framework for EEG spatial super-resolution. TGSD first employs a Hierarchical Spatial Prior Encoder to learn topology-aware priors over the complete electrode layout by integrating local geometric relationships with region-level contextual information. Based on these priors and sparse observations, a Conditional State-Space Diffusion Reconstructor progressively generates missing-channel signals through reverse diffusion, while alternating temporal and channel-wise state-space modeling captures long-range temporal dynamics and inter-channel dependencies in a unified framework. Experiments on the SEED and PhysioNet MM/I datasets show that TGSD consistently outperforms representative baselines under different super-resolution factors in both reconstruction fidelity and downstream classification performance. These results demonstrate the effectiveness of combining topology-aware spatial priors with conditional diffusion for enhancing practical low-density EEG sensing in wearable and IoT scenarios. The official implementation code is available at https://github.com/jtggz/TGSD.

Reliable seizure prediction is a prerequisite for closed-loop neurostimulation therapy, yet existing methods rarely account for the variability in EEG signal quality encountered in real-world deployment, and the overwhelming majority adopt non-strict evaluation protocols that overestimate generalisation performance. We propose CLSP-REQA (Closed-Loop Seizure Prediction with Real-time EEG Quality Assessment), a unified framework that embeds a lightweight signal quality estimator directly within the prediction pipeline. A Real-time EEG Quality Assessment (REQA) module runs in parallel with a Mamba-BiLSTM backbone, producing a scalar quality score q in [0,1] that modulates output confidence through a tiered non-linear fusion function (ECLO). Under strict cross-patient evaluation on the CHB-MIT Scalp EEG Database (n = 23 subjects, 198 seizures), CLSP-REQA achieves an AUC-ROC of 0.7426 +- 0.0199, outperforming the unadapted cross-patient baseline of 0.69 reported by Jemal et al., using only 16 EEG channels compared to 23 in prior work, and without requiring any target-patient data or domain adaptation. On the SIENA Scalp EEG Database (n = 14 subjects, 47 seizures), CLSP-REQA achieves AUC 0.7012 +- 0.0249, substantially surpassing the best domain-adapted cross-patient result of 0.61 on the same dataset, demonstrating strong cross-dataset generalisation. The framework outputs a structured four-tuple (p, q, c, Phi_SHAP) directly compatible with closed-loop neurostimulator interfaces.

We introduce a novel Longitudinal Focused Attention Meditation Electroencephalography (L-FAME) dataset and an accompanying benchmark, designed to foster research into the neural effects of various meditation practices and the evolution of these effects over a six-week training period. The dataset contains EEG recordings and psychological assessments from 74 healthy college participants, collected at two distinct time points: pre-intervention and post-intervention. Participants were randomly assigned to one of three distinct meditation groups: two mantra-based techniques (SA-TA-NA-MA and Hare Krishna) and one Breath Focus practice. Leveraging this unique longitudinal and comparative dataset, we propose a benchmark suite comprising three distinct classification tasks: (1) cognitive state decoding to distinguish between resting and meditation states, (2) fine-grained classification of the specific meditation techniques, and (3) cross-session adaptation to evaluate model generalization across the longitudinal time gap. We provide comprehensive baseline results for these tasks utilizing a range of classical machine learning algorithms and deep learning architectures. The complete dataset, preprocessing pipelines, and benchmark evaluation code will be publicly released, offering a valuable resource and a standardized framework for the development and comparison of new analytical methods in computational meditation research and EEG-based machine learning. The dataset is available at https://huggingface.co/datasets/L-FAME-Dataset-Benchmark/L-FAME

High-fidelity EEG generation is critical for alleviating data scarcity and addressing privacy constraints in large-scale neural modeling. Despite recent progress, most existing approaches formulate EEG generation via discrete denoising objectives, which inadequately reflect the inherently continuous temporal dynamics and spectral structure of neural activity. As a result, these methods often struggle to preserve long-range temporal dependencies and exhibit mismatches in the spectral and temporal structure of the generated signals. In this work, we argue that effective EEG generation requires models that operate directly on the continuous evolution of neural signals. We introduce Just EEG Transformer (JET), a generative framework based on conditional flow matching that models EEG as raw sequences evolving along continuous trajectories. By learning a smooth vector field that transports noise to the EEG data distribution, JET captures temporal continuity and transient dynamics without relying on discretized denoising schemes or domain-specific representations. To ensure that the learned dynamics remain consistent with key properties of EEG signals, we introduce principled constraints that preserve spectral structure, temporal stationarity, and signal-level statistics. Across three large-scale benchmarks, JET consistently achieves state-of-the-art performance, reducing TS-FID by over 40% compared to strong baselines. Extensive analyses show that JET captures key structural properties of neural dynamics, providing a scalable and principled approach to EEG generation. Project page: https://y-research-sbu.github.io/JET/ .

Learning universal representations from electroencephalogram (EEG) signals is a cutting-edge approach in the field of neuroinformatics and brain-computer interfaces (BCIs). Conventionally, EEG is treated as a multivariate temporal signal, where time- or frequency-domain features are extracted for representation learning. This paper investigates a simple yet effective EEG representation, i.e., microstates. Microstates represent the building blocks of brain activity patterns at a microscopic time scale. We build a universal microstate tokenizer from a large medical EEG dataset by clustering continuous EEG signals into sequences of discrete microstates. The microstate tokenizer is then adopted universally across a series of downstream tasks, including sleep staging, emotion recognition, and motor imagery classification. Experimental results show that EEG representation learning with microstates outperforms traditional time-domain and frequency-domain features under different models and across different tasks. Further analysis shows that microstates offer greater interpretability and scalability, thereby opening up applications in both cognitive neuroscience and clinical research.

Diagnosing epilepsy is challenging when routine EEGs lack interictal epileptiform discharges (IEDs). Intermittent photic stimulation (IPS) and hyperventilation (HV) can increase diagnostic yield, but their interpretation is subjective. We propose a reproducible pipeline that classifies EEG recordings acquired during stimulation procedures, using machine-learning features spanning temporal, spectral, wavelet, and connectivity domains, and a stacked ensemble to combine complementary feature sets. Performance is evaluated with leave-one-subject-out (LOSO) cross-validation on the TUH Epilepsy Corpus and a clinical Erasmus MC (EMC) cohort, including IED-free analyses on TUH. On TUH, ensembles achieve up to 97.8% AUC / 93.1% BAC on IED-free resting-state EEG and 94.1% AUC / 86.8% BAC on IED-free IPS. On EMC, IPS provides the strongest discrimination (79.4% AUC / 73.9% BAC), while HV performance benefits from stratifying subjects by responsiveness. These results indicate that stimulation-evoked activity, particularly IPS, contains meaningful discriminative information for IED-free epilepsy classification and that multi-domain ensembling improves robustness.

Self-initiated attention shifts play a critical role in voluntary behavior but are difficult to study due to the absence of explicit temporal markers. While previous studies have examined their neural correlates, it remains unclear how multi-dimensional electroencephalography (EEG) features contribute to their characterization within an interpretable computational framework. In this study, we build on an experimental paradigm developed in our previous work, which enables controlled comparison between task-constrained self-initiated shifts and externally instructed shifts under identical visual stimulation. Within this setting, we investigate whether preparatory EEG activity can distinguish these two types of attention shifts. We adopt a machine learning-based approach and conduct two complementary analyses: (1) a performance-oriented assessment of frequency-specific topographic patterns, and (2) a model-based feature attribution analysis using SHapley Additive exPlanations (SHAP). These analyses provide a structured view of how spectral features across regions of interest contribute to model behavior. Our results demonstrate reliable within-subject classification performance, indicating that preparatory EEG activity contains subject-specific discriminative information within this paradigm. The analysis shows that higher-frequency bands and frontal regions contribute strongly to model decisions, although such contributions should be interpreted cautiously due to the potential influence of non-neural artifacts in high-frequency EEG signals. Overall, this work highlights the value of interpretable machine learning for analyzing subject-specific EEG signal patterns in a controlled experimental setting, with potential applications in personalized and asynchronous brain-machine interface systems.

Intracranial EEG (iEEG) provides high-fidelity neural recordings essential for clinical and brain-computer interface applications, but acquiring these signals requires invasive surgery. While recent studies have attempted to estimate iEEG from non-invasive scalp EEG, most rely on patient-specific models, creating a circular dependency: if surgery is required to collect training data, the non-invasive model offers limited practical benefit. In this study, we address the challenge of cross-subject iEEG reconstruction by predicting intracranial signals for unseen patients using models trained on other individuals. We propose CAST (Cross-Attention Spatial-Temporal Transformer), a machine learning framework that translates scalp EEG into multi-channel iEEG waveforms through a two-stage transfer learning strategy. First, a temporal encoder extracts multi-scale neural representations at three different resolutions. Then, because electrode placements vary substantially across patients, a channel-aware decoder is calibrated using only a few minutes of data from the target subject. We evaluated the proposed method using leave-one-subject-out cross-validation on two public datasets comprising 1,282 iEEG channels. Experimental results demonstrate that CAST reconstructs cortical signals located near the scalp surface substantially better than deep subcortical activity. In highly observable sensorimotor regions, the model achieved peak correlations of up to r=0.864 in the precentral gyrus. Furthermore, with a channel selection strategy, CAST obtained a mean correlation of r=0.545 on viable subjects, outperforming previous within-subject baselines. These findings indicate that cortical iEEG signals can be reconstructed for unseen subjects from scalp EEG without extensive patient-specific training, and that only a brief calibration phase is sufficient to adapt the model to new hardware configurations.

Electroencephalograph (EEG) timeseries signals are characterized by significant noise and coarse spatial resolution, which complicates the classification of neurodegenerative diseases. Even SOTA deep learning architectures struggle to distinguish between healthy controls and diseased subjects, or between different disease types, due to high intergroup similarity. In this paper, we show that a spectrally selective approach to feature construction enhances class separability. By isolating signal strengths within the primary brainwave bands, we transform high dimensional raw data into high value spectral features. Our results demonstrate that in small datasets a) features derived from frequency and time frequency domain allow traditional machine learning models to match or exceed the performance of SOTA deep learning models, b) Attention mechanism is unable to distill the stable feature signatures that characterize healthy neural activity in both resting and task EEGs, and c) the limitations of attention based models in finding relevant spectral features appear to be robust in that providing frequency selective time domain input do not appreciably improve their performance. We validate our methodology across three open source resting EEG datasets and one task EEG dataset, providing robust empirical evidence for our claims.

The detection of Alzheimers disease (AD) is considered crucial, as timely intervention can improve patient outcomes. Electroencephalogram (EEG)-based diagnosis has been recognized as a non-invasive, accessible, and cost-effective approach for AD detection; however, it faces challenges related to data availability, accuracy of modern deep learning methods, and the time-consuming nature of expert-based interpretation. In this study, a novel lightweight and high-performance model, DeepTokenEEG, was designed for the diagnosis of AD and the classification of EEG signals from AD patients, individuals with other neurological conditions, and healthy subjects. Unlike traditional heavy-weight models, DeepTokenEEG ultilizes spatial and temporal tokenizer that effectively captures AD-related biomarkers in both temporal and frequency domain with only 0.29 million paramaters. Trained in a combined dataset of 274 subjects, including 180 AD cases, and 94 healthy controls, the proposed method achieves a maximum recorded accuracy of 100% on specific frequency bands, representing an improvement of 1.41-15.35% over state-of-the-art methods on the same dataset. These results indicate the potential of DeepTokenEEG for early detection and screening of AD, with promising applicability for deployment due to its compact size.

Electroencephalogram (EEG) signals are highly susceptible to artifacts, resulting in a low signal-to-noise ratio which makes extraction of meaningful neural information challenging. Artifact Subspace Reconstruction (ASR) is one of the most widely used artifact filtering techniques in EEG-based BCI applications, owing to its real-time applicability. ASR reconstructs artifact-free signals by operating in Principal Component (PC) space within sliding windows. However, ASR performance is critically sensitive to its threshold parameter - an incorrect threshold risks removing task-relevant neural features alongside artifacts. Furthermore, since PCs are linear combinations of all channels, subspace reconstruction in PC space may alter the underlying data structure, potentially discarding essential neural information. To address these limitations, we propose nASR, a novel end-to-end trainable Keras layer that jointly optimizes artifact rejection and downstream decoding. nASR introduces two trainable threshold parameters: K, which governs artifact detection in PC variance space, and L, which quantifies eigen-spread to pinpoint the primary artifact--contributing channels, enabling selective channel-level reconstruction that preserves clean channel information. An ablation study comprising five model variants (m01 - m05), evaluated across two subjects from the BCI Competition IV Dataset 1, confirms that nASR variants consistently outperform traditional ASR on test classification metrics, while achieving a 6-8x reduction in inference time, making nASR a strong candidate for real-time BCI applications demanding both low latency and high decoding performance.

Foundation models (FMs) promise to extract unified representations that generalize across downstream tasks. They have emerged across fields, including electroencephalography (EEG), but it is less clear how effective they are in this particular field. Published evaluations differ in datasets, in the EEG-specific preprocessing that might influence reported results, and in the reported metrics, frequently obscuring the clinical relevance in EEG. We introduce NeuroAtlas, the largest EEG benchmark to date: 42 datasets and 260k hours covering clinical EEG (epilepsy, sleep medicine, brain age estimation) and brain-computer interfaces, and include multiple datasets per task along with bespoke clinical evaluation metrics. Besides evaluating EEG-FMs with respect to supervised baselines, we present results from generic time-series FMs. We report three findings. First, EEG-specific FMs do not consistently outperform time-series FMs, which have neither EEG-focused architectures nor been pretrained on EEG. Second, standard machine learning metrics are insufficient to assess clinical utility: thus, we thoroughly evaluate more appropriate measures such as the quality of event-level decision-making, hypnogram-derived features, and the brain-age gap in the domains of epilepsy, sleep, and brain age, respectively. Third, model rankings and performance can vary substantially within domains. We conclude that pretrained models perform largely on par, with only narrow advantages for a few, and that current models do not yet deliver on the promise of an out-of-the-box unified EEG model. NeuroAtlas exposes this gap and provides the datasets and metrics for the next generation of unified EEG FMs.

Clinical EEG interpretation requires reasoning over full EEG sessions and integrating signal patterns with clinical context. Existing EEG foundation models are largely designed for short-window decoding and do not incorporate clinical context. We introduce CLEF, a clinically grounded long-context EEG foundation model. CLEF represents EEG sessions as 3D multitaper spectrogram tokens, enabling tractable Transformer modeling at session scale, and aligns embeddings with neurologist reports and structured EHR data through contrastive objectives. We evaluate CLEF on a new 234-task benchmark spanning disease phenotypes, medication exposures, and EEG findings, with more than 260k EEG sessions from over 108k patients. CLEF outperforms prior EEG foundation models on 229 of 234 tasks, improving mean AUROC from 0.65 to 0.74. Reconstruction-only pretraining surpasses prior EEG foundation models, while report and EHR alignment yields further gains. Held-out concept and external-cohort experiments suggest that these representations transfer beyond observed alignment targets. These results support session-scale, clinically grounded representation learning as a promising foundation-model paradigm for clinical EEG.

Event identification in continuous neural recordings is a critical task in neuroscience. Decoding in EEG is dominated by classifying windows aligned to known event onsets. However, while available in controlled experiments, such onsets are absent in continuous real-world monitoring. Here, we introduce DANCE, a deep learning pipeline that frames neural decoding as a set-prediction problem and jointly detects and classifies events directly from raw, unaligned signals. Evaluated separately on ten datasets curated from the literature with a wide variety of event types (ranging from milliseconds to minutes in duration), our model outperforms existing methods on a broad range of cognitive, clinical and BCI tasks. This single architecture establishes a new state of the art in the competitive task of seizure monitoring and matches the accuracy of onset-informed models for BCI tasks. Overall, our method marks a step towards end-to-end asynchronous neural decoding models

Accurate sleep stage classification across datasets remains challenging due to variability in EEG channel montages, sampling rates, recording environments, and subject populations. Although deep learning has shown considerable promise for automated sleep staging, most existing cross-dataset methods rely on one-dimensional EEG signal representations, whereas the use of two-dimensional spectrogram-based inputs within an unsupervised domain adaptation framework has remained largely unexplored. Here, we propose STDA-Net (Spectrogram-based Temporal Domain Adaptation Network), a framework that combines a convolutional neural network (CNN) for spectrogram-based feature extraction, a bidirectional long short-term memory (BiLSTM) module for temporal modeling of sleep dynamics, and a domain-adversarial neural network (DANN) for source-to-target feature alignment without requiring any labeled target-domain data during training. Experiments are conducted on three publicly available datasets Sleep-EDF, SHHS-1, and SHHS-2 under six cross-dataset transfer settings. Results show that the proposed framework achieves an average accuracy of 89.03% and an average macro F1-score of 87.64%, consistently outperforming existing 1D baseline methods in terms of balanced classification performance, with substantially lower variance across five independent runs, indicating improved stability and reproducibility. Overall, these findings demonstrate that 2D spectrogram-based representations, combined with temporal modeling and adversarial domain adaptation, provide a robust and competitive alternative to conventional 1D EEG inputs for cross-dataset sleep staging.

Denoising wearable electroencephalogram (EEG) is inherently challenging since neural activity is not only subtle but also inseparable from spectrally overlapping noise artifacts. Classical signal processing methods, relying on fixed or heuristic rules, cannot handle the time-varying pervasive artifacts in wearable EEGs. Deep learning methods, on the other hand, show promise in decomposition-free EEG denoising using highly expressive neural networks, but the training requires artifact-free EEG, which is inherently unobtainable. To address this, we propose Intelligent Partitioning for Self-supervised Denoising (iPSD). Our method eliminates the need for clean references by learning to partition an input EEG segment into independent noisy realizations with the same underlying signal. This enables self-supervision of deep learning denoisers, even in zero-shot settings where only a single EEG segment to be denoised is available. We validate iPSD through extensive experiments, including validations on wearable EEG from in-ear sensors. The results show that iPSD achieves state-of-the-art performance, most notably under extremely low signal-to-noise ratios (down to -10 dB) and challenging artifacts (e.g., EMG), with spectral fidelity orders of magnitude higher than competitive baselines.

This research addresses a validated TMS EEG cleaning pipeline and a corresponding benchmark dataset. It evaluates two widely used artifact removal pipelines. A reference dataset of carefully preprocessed EEG signals was established to support future algorithm development and enable systematic comparison of automated artifact removal strategies, despite the absence of a true physiological ground truth. The study evaluates the effectiveness of two widely used source based artifact removal approaches and examines their impact on signal quality improvement and preservation of TMS-evoked potentials. The results support the robustness of the proposed preprocessing workflow and demonstrate its potential for improving data reliability in both research and clinical applications. A key goal is integrating TMS EEG and embedding it within a larger BCI framework. Ultimately, these efforts aim to enhance understanding of cortical dynamics and expand the clinical and research applications of TMS EEG.

Electroencephalography (EEG) signals provide millisecond-level temporal resolution but their analysis is limited by remarkable noise and inter-subject variability, making robust personalization difficult under limited annotations. Unsupervised Individual Continual Learning (UICL) has been proposed to address this practical challenge, where a model pretrained on a labeled cohort must adapt online to unlabeled subject streams under strict memory constraints. However, existing UICL methods typically store full past samples, which undermine the continual learning goal of avoiding retraining. Observing that EEG signals exhibit well-structured morphologies to be exploited via morphology-aware selection, compression, and reconstruction, here we propose Adaptive Data Compression and Reconstruction (ADaCoRe) for UICL. This is a memory-efficient pipeline composed of saliency-driven keyframe protection, rational polyphase compression, adjoint reconstruction with verbatim overwrite on protected indices, and prototype-confidence selection for adaptive exemplar maintenance. Across three representative benchmarks, ADaCoRe consistently outperforms recent strong baselines under tight buffer regimes (eg., the performance gains are at least +2.7 and +15.3 ACC on ISRUC and FACED datasets, respectively). Ablation studies quantify compression-fidelity trade-offs and highlight the contribution of each design, while visualizations confirm the preservation of key EEG morphology during compression and reconstruction.

Electroencephalogram (EEG) signals are vital for automated seizure detection, but their inherent noise makes robust representation learning challenging. Existing graph construction methods, whether correlation-based or learning-based, often generate redundant or irrelevant edges due to the noisy nature of EEG data. This significantly impairs the quality of graph representation and limits downstream task performance. Motivated by the remarkable reasoning and contextual understanding capabilities of large language models (LLMs), we explore the idea of using LLMs as graph edge refiners. Specifically, we propose a two-stage framework: we first verify that LLM-based edge refinement can effectively identify and remove redundant connections, leading to significant improvements in seizure detection accuracy and more meaningful graph structures. Building on this insight, we further develop a robust solution where the initial graph is constructed using a Transformer-based edge predictor and multilayer perceptron, assigning probability scores to potential edges and applying a threshold to determine their existence. The LLM then acts as an edge set refiner, making informed decisions based on both textual and statistical features of node pairs to validate the remaining connections. Extensive experiments on TUSZ dataset demonstrate that our LLM-refined graph learning framework not only enhances task performance but also yields cleaner and more interpretable graph representations.

EEG microstate analysis segments continuous brain electrical activity into brief, quasi-stable topographic configurations that reflect discrete functional brain states. Conventional approaches such as Modified K-Means operate directly in electrode space with hard assignment, offering no learned latent representation, no generative decoder, and no mechanism to decode latent configurations into verifiable scalp topographies, limiting both model transparency and interpretability. To address this, we present a Convolutional Variational Deep Embedding (Conv-VaDE) model that jointly learns topographic reconstruction and probabilistic soft clustering in a shared latent space. Conv-VaDE enables generative decoding of cluster prototypes into verifiable scalp topographies, replacing opaque hard partitioning with probabilistic soft assignment. A polarity invariance scheme and a four-dimensional grid search over cluster count (K from 3 to 20), latent dimensionality, network depth, and channel width are conducted to systematically reveal how each architectural design choice shapes the quality, stability, and interpretability of learned EEG microstate representations. The model is evaluated on the LEMON resting-state eyes-closed EEG dataset with ten participants using topographic template formation, clustering stability, and global explained variance (GEV). The architecture search reveals that depth L = 4 appears consistently across all 18 best-performing configurations, yielding a best-case GEV of 0.730 and a silhouette of 0.229 at K = 4 across the model sweeps, where moderately deep networks with compact channel widths and small latent dimensionality dominate across the full K range. These results establish that principled architecture search, rather than model scale, is the key to interpretable and stable EEG microstate discovery via variational deep embedding.

Reliable seizure detection in mouse models is essential for preclinical epilepsy research, yet manual review of synchronized video-EEG recordings is labor-intensive and single-modality systems fail for complementary reasons: video-based methods are easily confounded by benign behaviors, whereas EEG-based methods are vulnerable to ictal motion artifacts. We present EEGVFusion, a multimodal framework that combines self-supervised EEG representation learning, spatio-temporal video encoding, optimal-transport alignment, and bidirectional cross-attention to integrate neural and behavioral evidence. We also curate an expert-annotated dataset of synchronized EEG and video recordings comprising 93 sessions from 15 mice for training and evaluation. In the random-session split, EEGVFusion achieved a Balanced Accuracy of 0.9957 with perfect event sensitivity and an Event FAR of 0.6250 FP/h, indicating strong seizure detection performance with a low false-alarm burden. In a single held-out-subject evaluation with Subject 110 reserved for testing, EEGVFusion achieved a Balanced Accuracy of 0.9718 and reduced Event FAR from 2.7250 FP/h for the EEG-only counterpart to 0.4833 FP/h while preserving perfect event sensitivity. Targeted ablations further showed that EEG pre-training and OT alignment help reduce false alarms while preserving event sensitivity.

Brain encoding models not only serve to decipher how visual stimuli are transformed into neural responses, but also represent a critical step toward visual prostheses that restore vision for patients with severe vision disorders. Brain encoding involves two fundamental steps: achieving faithful reconstruction of neural responses and establishing cross-modal alignment between visual stimuli and neural responses. To this end, we propose ViBE, a novel brain encoding framework for generating magnetoencephalography (MEG) and electroencephalography (EEG) signals from visual stimuli. Specifically, we first design a spatio-temporal convolutional variational autoencoder (TSC-VAE) that captures the spatio-temporal characteristics of M/EEG signals for effective neural response reconstruction. To bridge the modality gap between visual features and neural representations, we employ Q-Former to map CLIP image embeddings to the TSC-VAE latent space, producing neural proxy embeddings. For comprehensive cross-modal alignment, we combine mean squared error (MSE) loss for point-wise feature matching with sliced Wasserstein distance (SWD) for probability distribution alignment between the neural proxy embeddings and TSC-VAE latent embeddings. We conduct extensive experiments on the THINGS-EEG2 and THINGS-MEG datasets, demonstrating the effectiveness of our approach in generating high-quality M/EEG signals from visual stimuli.

Recent self-supervised pre-training methods for electroencephalogram (EEG) have shown promising results. However, the pre-trained models typically require full fine-tuning on each downstream task individually to achieve good performance. In practical applications involving multiple tasks, utilizing a separate model for each task is not ideal regarding computational and spatial cost. In this study, we go one step further and explore the simultaneous adaptation of a pre-trained model to multiple different tasks. The EEG signals exhibit significant heterogeneity due to their collection from various subjects using diverse devices and experimental setups, resulting in potential conflicts among different tasks that impede joint optimization. To tackle this challenge, we propose MTEEG, a multi-task EEG analysis framework which incorporates task-specific low-rank adaptation (LoRA) modules to disentangle the parameter space and alleviate task conflicts. To investigate the trade-off between task specification and interaction, we propose three variants of MTEEG that integrate the LoRA modules in different ways and evaluate them on six downstream tasks, demonstrating that MTEEG can surpass state-of-the-art single-task methods on the majority of metrics. MTEEG shows the potential of multi-task EEG analysis and promotes the development of general-purpose brain-computer interfaces in the future.

Electroencephalography (EEG) is highly susceptible to artifact contamination, such as electrooculographic (EOG) and electromyographic (EMG) interference, which severely degrades signal quality and hinders reliable interpretation in applications including neurological diagnosis, brain-computer interfaces (BCIs), etc. Effective EEG denoising remains challenging because different artifact sources exhibit diverse and temporally varying distributions, together with distinct spectral characteristics across frequency bands. To address these issues, we propose BandRouteNet, an adaptive frequency-aware neural network for EEG denoising that jointly exploits band-specific processing and full-band contextual modeling. The proposed model performs band-wise denoising to explicitly capture frequency-dependent artifact patterns. Within this framework, we introduce a routing mechanism that adaptively determines where and to what extent denoising should be applied across temporal locations within each frequency band. In parallel, a full-band conditioner directly processes the original noisy EEG to extract global temporal context, producing both conditional parameters for modulating the band-wise pathway and a coarse-grained signal-level refinement to supplement the final reconstruction. Extensive experiments on the EEGDenoiseNet benchmark dataset demonstrate that BandRouteNet outperforms other methods under EOG, EMG, and mixed-artifact conditions in terms of Relative Root Mean Square Error (RRMSE) and Signal-to-Noise Ratio Improvement (SNR$_{\text{imp}}$) under unified experimental settings, while remaining highly parameter-efficient with only 0.2M trainable parameters. These results highlight its strong potential for high-performance EEG artifact removal in resource-constrained applications.

Patients with dementia typically exhibit cognitive impairment, which is routinely assessed using the Mini-Mental State Examination (MMSE). Concurrently, their underlying neurophysiological abnormalities are reflected in Electroencephalography (EEG), providing a basis for joint modeling. However, traditional multi-task approaches suffer from feature entanglement, which leads to inter-task interference when handling heterogeneous objectives.To address this challenge, we propose a task-guided spatiotemporal network (TGSN) with diffusion augmentation for EEG-based dementia diagnosis and MMSE prediction. Specifically, TGSN integrates a multi-band feature fusion module to capture complementary spectral information from EEG. Meanwhile, a pre-trained data augmentation module utilizing a diffusion process is introduced toincrease sample diversity. To model the complex spatiotemporal patterns of EEG, we propose a gated spatiotemporal attention module that captures long-range spatial dependencies and temporal dynamics. Moreover, we design a task-guided query module to achieve task-specific feature extraction, thereby mitigating task interference. The effectiveness of TGSN is evaluated on the XY02 dataset. Experimental results demonstrate that the proposed network outperforms several state-of-the-art methods, achieving classification accuracies of 97.78% for Alzheimer's Disease (AD)/Frontotemporal Dementia (FTD) and 83.93% for AD/FTD/Vascular Cognitive Impairment (VCI), which exceed the best baselines by 16.39% and 8.28%, respectively. In parallel, it reduces the RMSE for MMSE prediction to 1.93 and 2.38, achieving significant error reductions of 1.44 and 1.43 compared to the best baselines. Additionally, validation on the DS004504 dataset demonstrates strong cross-dataset generalization...

Developing robust and clinically reliable EEG biomarkers requires evaluation frameworks that explicitly address cross population generalization in multi site settings such as Parkinsons disease (PD) detection. Models trained under i.i.d. assumptions often capture population specific artifacts rather than disease relevant neural structure, leading to poor generalization across clinical cohorts. EEG further amplifies this challenge due to low signal to noise ratio and heterogeneous acquisition conditions. We propose a population aware evaluation framework to assess the robustness and clinical reliability of EEG biomarkers under distribution shift. Using an n gram expansion strategy, we enumerate all cross population train test configurations across five independent cohorts, resulting in 75 directional evaluations. A nested cross validation design with integrated channel selection ensures prospective biomarker identification without population leakage. Results show that cross population transfer is asymmetric and that both accuracy and biomarker stability improve with increasing training population diversity, achieving up to 94.1% accuracy on held out cohorts. A theoretical analysis based on mixture risk optimization and hypothesis space contraction explains these trends, showing that multi population training promotes population robust representations. This work establishes a principled framework for learning robust, generalizable, and clinically reliable EEG biomarkers for multi site biomedical applications.

State space models (SSMs) achieve linear-time complexity but struggle with multi-channel physiological signals due to three limitations: fixed kernels cannot capture multi-scale temporal dynamics (motor preparation over hundreds of milliseconds vs. execution transients in tens of milliseconds), Markovian state updates restrict global context for periodic oscillations, and channel-independent processing ignores spatial electrode topology. We introduce NAKUL, extending SSMs for medical signal analysis through three contributions: (1) Dynamic Kernel Generation-parallel SSM branches with varying kernel sizes (3, 5, 7, 11 timesteps) are weighted by a meta-network that analyzes input statistics, enabling adaptive temporal scale selection; (2) Spectral Context Modeling-FFT-based operations with learnable Gaussian frequency band filters capture global periodic patterns in $O(N \log N)$ complexity; (3) Graph-Guided Spatial Attention-fixed electrode topology provides spatial biases to multi-head attention for principled cross-channel interaction. On BCI Competition IV-2a motor imagery (our primary benchmark), NAKUL achieves 91.7$\pm$0.6% accuracy, matching EEG-Conformer (92.1$\pm$0.7%) while using 28% fewer parameters (2.5M vs 3.5M) and 2.0$\times$ faster inference (4.3ms vs 8.7ms). The model generalizes to EEG emotion recognition (83.6%), multimodal EEG-fMRI (91.4%), and medical imaging (92.8% on ultrasound), demonstrating architectural versatility. Ablations show dynamic kernels contribute +2.6% and exhibit interpretable scale selection patterns correlated with known neural dynamics.

We tested whether auditory-evoked EEG supports subject-independent five-vowel perception decoding when trial identity, model identity, prediction provenance, and participant-level inference are controlled within a single benchmark. We reconstructed Study 2 event tables from OpenNeuro ds006104 version 1.0.1 and analysed the consonant-vowel pair task. One-to-one marker-stimulus pairing yielded 3,840 independent trials; control-condition selection and artifact rejection retained 1,094 epochs from 16 participants and 61 EEG channels. Thirteen unique implementations were evaluated using leave-one-subject-out testing, with participant metrics reconstructed from 36,102 trial predictions across 33 complete prediction replicas. Random Forest was numerically highest at 21.474% balanced accuracy (95% participant-bootstrap interval, 19.526-23.482%; chance, 20%), but neither its participant-level tests nor any implementation survived correction across the 13-model family. Deep-model performance was close to chance, and several architectures showed substantial seed-dependent variation and low trial-label agreement. An exploratory MDM analysis comprising 9,616 genuine refits across training cohorts of 3-15 participants showed no monotonic performance gain. Within this dataset and protocol, evidence for reliable cross-subject five-vowel decoding is limited. The benchmark provides a reproducible chain from source rows to retained epochs, predictions, participant-level metrics, multiplicity-adjusted inference, and bounded diagnostic analyses.

Predicting driver intention from neurophysiological signals offers a promising pathway for enhancing proactive safety in advanced driver assistance systems, yet remains challenging in real-world driving due to EEG signal non-stationarity and the complexity of cognitive-motor preparation. This study proposes and evaluates an EEG-based driver intention prediction framework using a synchronised multi-sensor platform integrated into a real electric vehicle. A real-world on-road dataset was collected across 32 driving sessions, and 12 deep learning architectures were evaluated under consistent experimental conditions. Among the evaluated architectures, TSCeption achieved the highest average accuracy (0.907) and Macro-F1 score (0.901). The proposed framework demonstrates strong temporal stability, maintaining robust decoding performance up to 1000 ms before manoeuvre execution with minimal degradation. Furthermore, additional analyses reveal that minimal EEG preprocessing outperforms artefact-handling pipelines, and prediction performance peaks within a 400-600 ms interval, corresponding to a critical neural preparatory phase preceding driving manoeuvres. Overall, these findings support the feasibility of early and stable EEG-based driver intention decoding under real-world on-road conditions. Code: https://github.com/galosaimi/Mind2Drive.

Electroencephalography (EEG) foundation models have shown strong potential for learning generalizable representations from large-scale neural data, yet their clinical deployment is hindered by distribution shifts across clinical settings, devices, and populations. Test-time adaptation (TTA) offers a promising solution by enabling models to adapt to unlabeled target data during inference without access to source data, a valuable property in healthcare settings constrained by privacy regulations and limited labeled data. However, its effectiveness for EEG remains largely underexplored. In this work, we introduce NeuroAdapt-Bench, a systematic benchmark for evaluating test-time adaptation methods on EEG foundation models under realistic distribution shifts. We evaluate representative TTA approaches from other domains across multiple pretrained foundation models, diverse downstream tasks, and heterogeneous datasets spanning in-distribution, out-of-distribution, and extreme modality shifts (e.g., Ear-EEG). Our results show that standard TTA methods yield inconsistent gains and often degrade performance, with gradient-based approaches particularly prone to heavy degradation. In contrast, optimization-free methods demonstrate greater stability and more reliable improvements. These findings highlight the limitations of existing TTA techniques in EEG, provide guidance for future development, and underscore the need for domain-specific adaptation strategies.