AI Code Generation

This study empirically evaluates whether cost-efficient Large Language Models (LLMs) can be trusted to generate enterprise code to a written specification. Three models (Gemini Flash 3, GPT-5.4 mini and Claude Haiku 4.5) were asked to solve 992 algorithmic problems as Java Spring Boot service methods conforming to a mandated signature and data-transfer-object specification, crossing four model and agentic coding tool combinations with two prompt variants to yield eight configurations, with iteration forbidden and hardcoded answers explicitly prohibited. Eight problem statements were withheld to probe how models respond to missing input. The 7,593 resulting methods were classified by an eight-class outcome taxonomy describing what each does about producing an answer, then deployed and executed, giving 7,936 measured requests joined to that classification. Structural conformance approached ceiling, yet 38.4% of methods do not compute the value they returned and only 12.9% of returned answers were correct. Conditioning on outcome class shows that response reliability and correctness are inversely related, whereas genuinely computing methods answered least often and were correct 19.3%. Limitations include single generation runs per configuration, partial harness coverage, single-pass timing, syntactic classification, and probable corpus contamination.

Post-training with reinforcement learning (RL) is a critical phase in the development of code-generating large language models (LLMs), as it ensures adherence to instructions and the production of functionally correct code. This process typically requires computationally intensive code sample generation from Transformer-based LLMs and substantial GPU-CPU communication for sequence verification. To address these computational challenges, this work examines whether RL-based post-training can be performed entirely offline by leveraging existing datasets rather than generating new samples. The findings indicate that, with only a few hours of training, zero-shot code generation performance of LLMs can be substantially improved without online sampling. Additionally, offline RL produces performance gains across models ranging from 0.5B to 7B parameters, although the extent of improvement varies among model families.

This study evaluates Vibe Coding, an emerging AI-led conversational programming paradigm that enables developers to generate software through natural-language interaction with large language models. Using a mixed-methods design, the study assessed performance efficiency, cognitive implications, and responsible adoption in comparison with traditional and AI-assisted coding environments. Thirty participants, including professional developers and advanced computing students, completed equivalent programming tasks under three experimental conditions. Quantitative data were analyzed using descriptive statistics and repeated-measures ANOVA, while qualitative data were examined through thematic analysis. Results show that vibe coding significantly improved development efficiency, reducing task completion time by 27% compared with traditional coding and 12% compared with AI-assisted coding. However, these gains were accompanied by lower maintainability indices and higher security vulnerabilities, indicating trade-offs in software quality. Usability results yielded a good rating (SUS = 71.4), while cognitive workload remained moderate (NASA-TLX = 55.5), reflecting reduced syntactic effort but increased linguistic reasoning. Thematic analysis identified trust calibration, loss of control, cognitive adaptation, and prompt-engineering strategy as key constructs. Notably, perceived loss of control was associated with increased security risks due to reduced transparency and validation of AI-generated outputs. Based on these findings, the study proposes a three-pillar framework for responsible adoption: hybrid integration of human and AI capabilities, human oversight and transparent accountability, and context-aware deployment. Overall, vibe coding enhances productivity but requires critical oversight, reinforcing its role as a transformative yet transitional paradigm in software development.

Large Language Models (LLMs) often generate natural-language comments while writing code, and these comments become part of the context used to generate the code that follows. However, it remains unclear which properties of comments affect code-generation performance. We study this question through observational analyses and controlled interventions. On LiveCodeBench, neither comment frequency nor broad comment intent reliably predicts pass@1. We then prefill weaker recipient models with comment blocks written by stronger source models, allowing us to separate comment surface form from the solution content they convey. Comments from source solutions that pass the tests raise recipient pass@1 by 17.2% on average. In contrast, comments describing failed solutions provide no reliable gain, while comments written for a different problem reduce pass@1 by 20.8%. Finally, across a wide range of models and prompt variants, most recipient models show no significant recovery of the external-comment gain, and the best case recovers only 24%. These results show that comments help code generation not merely because they are comments, but because they can provide correct solution content that prompting cannot reliably elicit.

When an agent writes code, the development framework becomes the control system for a non-deterministic worker. Spec-first, agent-driven frameworks have gained rapid traction since 2025; the installable ones, GitHub Spec Kit, obra/superpowers, BMAD, and GSD, and our own, all capture intent through a specification or durable planning artifacts. Since they agree on capturing intent up front, what separates them is how each enforces the engineering discipline that keeps agent-written code clean, correct, and maintainable. Every framework enforces that discipline somehow; they differ in how. We characterize three modes: enforcement by persuasion (prompt discipline the model may ignore), by front-loaded structure (strong specs, then a trusted build), and through controls the agent cannot edit (a deterministic orchestrator, human-approved gates, immutable tests, and a green result that must pass against a live, branched database). We introduce Consort, a spec-first, test-driven agent framework built on the third, enforcing that discipline through controls the agent runs inside but cannot bypass, in which a deterministic orchestrator drives separate role agents through a spec-first design lane and a test-driven build lane on a live database branch. We argue that enforcing the tests and gates in code keeps agent-written code honest and verifiable, while its specialized roles, like the human roles before them, are what make it maintainable, claims we frame as a pre-registered, testable hypothesis.

Exception Related Code (ERC), which includes throw statements, conditions (if statements) that guard those throw statements, and try/catch blocks, is an essential component of software systems, allowing developers to detect and handle exceptional states that deviate from the expected program behavior. However, manually writing ERC across large codebases is tedious. We propose a novel task: retrofitting existing code with ERC. Namely, given code (without ERC) and Exceptional Behavior Tests (EBTs) (e.g., check if method throws InvalidArgumentException if null is given as the value to the argument) we aim to automatically generate missing ERC, such that the given tests pass. We design and implement Exception Coder (EXCODER) that performs context engineering to help Large Language Models (LLMs) tackle this task. EXCODER integrates static and dynamic program analysis with LLMs by providing the extracted contextual information to the LLMs. To evaluate EXCODER, we build a benchmark constructed from GitHub Java repositories, where we systematically remove ERC in 304 methods from 75 projects. Our results demonstrate that EXCODER provides an effective, though imperfect, solution to this problem in automated code generation, offering developers the first way to implement ERC following test-driven development. When combined with Qwen 2.5 Coder 32b, EXCODER achieves pass@1, 5, and 10 rates of 85.92% (12.56 percentage points over baseline), 86.18% (12.82 p.p. over baseline), and 86.51% (13.15 p.p. over baseline), respectively, on developer-written test suites. Our manual inspection of the generated code further reveals limitations of EXCODER, pointing to directions for future work.

Dense change detection in remote sensing requires vision-language models (VLMs) to compare bi-temporal images and generate accurate pixel-level masks. Existing VLMs are largely confined to change captioning outputs, and the few that produce pixel-level masks still rely on external decoders or flat text-as-mask serialization, which are less effective for small and fragmented changes. We introduce QUAKE-CD, a framework that recasts dense change prediction as syntax-verifiable structured generation. QUAKE-CD represents binary change masks as grammar-constrained quadtree token sequences, making the masks compact, syntactically checkable, and deterministically decodable within an autoregressive generation space. We further construct QUAKE-CoT, which pairs these sequences with chain-of-thought traces grounded in visual evidence, and jointly optimizes textual reasoning and spatial dense prediction through a progressive curriculum followed by grammar-gated dual-reward RL. On QUAKE-CoT, QUAKE-CD achieves 78.31% accumulated F1, outperforming decoder-based and flat text-as-mask VLMs while producing more faithful bi-temporal reasoning.

Large language models (LLMs) have been ex- ploited to generate malware, but the effective- ness of guardrails for code generation secu- rity remains unclear. We introduce CS-Guard, the first benchmark to systematically evalu- ate guardrails for code generation security. It covers 1) text-to-code generation with 1000 high-quality malware-generation prompts, 7 jailbreak attacks, and a novel fictional scenario attack (FSA) that embeds malicious intent in a legitimate fictional software-development sce- nario; and 2) code-to-code generation with 331 code prompts spanning code infilling, code completion, and code translation. We empiri- cally evaluate 9 guardrails across seven LLMs. We find that current guardrails perform poorly against malicious code-generation re- quests: for text-to-code, the average attack success rate (ASR) after jailbreaks reaches about 50% for many guardrails; for code-to- code, average ASR approaches 100% on base LLMs and remains high across many guardrails (14.4% to nearly 100%). Our FSA also achieves ASR close to 100% across many guardrails, raising major reliability concerns for real-world software development. To sup- port future research, CS-Guard uses a modular three-layer guardrail taxonomy that lets devel- opers register guardrails for evaluation. We release the benchmark and data to enable fur- ther community evaluation.

Existing methods for test-time reinforcement learning (TTRL) derive rewards from answer-level self-voting on unlabeled test-time tasks with canonical answers, but this breaks down for code generation because programs cannot be compared by surface form and therefore do not directly provide a usable training signal. To make TTRL applicable to code generation, we propose probe-driven TTRL, which constructs output-free probe inputs from the problem statement, executes candidate programs on these probes, and defines a Probe Consensus Reward (PCR) from the resulting behavioral agreement. PCR provides a behavioral training signal for open-vocabulary programs, but it is not a fully reliable verifier and remains susceptible to reward hacking through spurious consensus. We therefore introduce Entropy-Regularized Rank-Masked Policy Optimization (ERPO), which converts low PCR into conservative negative updates through rank masking and controls policy drift with an entropy ceiling. On coding benchmarks, ERPO substantially improves pass@1 and pass@k in both in-domain adaptation and zero-shot transfer.

Existing causal-inference benchmarks for LLMs mostly score method descriptions or whether generated code runs, not whether the executed workflow recovers the target causal estimate. CausalVerify studies this verification problem for structured econometric causal-estimation workflows by separating realistic interpretation from verifiable computation. It pairs 259 published economics papers (reconstructed research question, data description, institutional context) with 100 fixed-seed synthetic scenarios that realise CSV datasets for difference-in-differences, event study, instrumental variables, and regression discontinuity designs. Experiment A (real-paper text agreement) scores method-family and direction agreement against four-LLM consensus labels. Experiment B (synthetic execution) runs model-written R code and checks whether the extracted treatment-effect estimate matches a canonical estimator on the same realised dataset; this execution-grounded correctness layer is L2b+, distinct from L2b, which records only whether the code executes. A calibration arm asks whether self-reported confidence separates correct from incorrect workflows. On Experiment B, seven LLMs reach L2b+ pass rates of 10% to 88% at the default 50% tolerance, and 66 of the 426 workflows that execute (15.5%) return a wrong estimate. Execution ranking (L2b) agrees with L2b+ far better than text-direction scoring (L4): Kendall $τ=0.81$ and Spearman $ρ=0.93$, versus Kendall $τ$ between $-0.20$ and $0.10$ for L4. Llama-3.3-70B-Instruct shows the same qualitative gap, and reported confidence does not reliably separate correct from incorrect workflows. The claims are confined to standardized single-shot workflows in these four design families under the evaluated R backend and model panel; the benchmark does not measure general causal-inference ability. Code, data, cached outputs, and a datasheet are released.

As AI-code assistant tools become widespread, automatic assessment of the correctness of generated code becomes a significant challenge. Code LLMs are prone to hallucinations, which may lead to code that does not solve the required problem, or even to code with severe security vulnerabilities. In this paper, we introduce CodeTD -- the first approach to pre-execution assessment of code correctness based on topological data analysis (TDA) of Code LLMs' attention maps. Our method quantifies prompt-generation mismatch using topological patterns of attention maps. We carry out experiments with common benchmarks (HumanEval, MBPP, BigCodeBench, MultiPL-E), 5 programming languages and 10 Code LLMs of size up to 34B parameters. The experimental results show that the proposed method outperforms recent baselines. Moreover, CodeTD is transferable between coding benchmarks.

AI coding assistants now select, install, and configure software, and attackers have exploited that position through invented package names, compromised maintainer accounts, and manipulated repository text. In response, the supply-chain community publishes machine-checkable trust signals: software bills of materials, signed releases, build provenance attestations, and declared official channels. Whether coding assistants read or act on those signals has not been measured for any of these classes on research software. We pre-registered and ran a controlled study on six open-source research software projects (three HPC, three quantum computing) drawn from an 87-project corpus, with protocol, seed, panel, and analysis plan deposited with a DOI before any trial. W created nine modified copies for each project: no signal, one per signal class, two with a signature or attestation from the wrong issuer, one with all four signals, and one reproducing documented conflicts in the project's own metadata. Three models under two ways of operating an assistant, with and without an approval step, gave 1,920 registered trials, plus a supplement on three frontier models. We scored behavior from container logs rather than from what the assistant said, and recorded the cost of every trial. Verification was rare under every condition: in 9 of 1,920 registered trials (0.5%), the assistant opened any provenance signal before installing in 0 of 384 control trials, and no trial ran a verification command, so signal presence had no measurable effect. We drew three conclusions: publishing signals is necessary but not sufficient; price did not buy verification (the model that verified most often costs $0.10 per trial; the most capable, at$1.00, verified nothing); verification must be built into the program that runs the assistant. We release the per-trial cost ledger, the protocol, and every log.

Natural-language Computer-Aided Design (CAD) code generation aims to turn design intent into executable and editable parametric programs. Large language models (LLMs) make this goal increasingly practical, but useful systems must preserve the construction process behind the rendered geometry. Existing benchmarks and methods mostly focus on how closely the generated CAD model matches the reference geometry, often using metrics such as Intersection over Union (IoU). Such metrics can miss errors in part decomposition, construction hierarchy, Boolean operations, sketch structure, and geometric relations. This gap calls for a representation that makes design intent explicit and lets a system check generated code against that intent. We propose CIT-CAD, a framework that infers a Constraint Intent Tree (CIT) from the input description to represent the intended entities, hierarchy, operations, and relations. The tree has two roles: it guides CAD code generation and defines expected constraints for verification. The framework extracts actual constraints from the generated program, compares them with the expected constraints, and uses mismatches to localize and repair design violations. Experiments show that the framework improves CAD generation performance, with larger gains on more complex multi-entity designs. By turning design intent into an explicit and checkable object, this work is the first attempt to move text-to-CAD generation beyond rendered-geometry matching toward construction-aware synthesis, verification, and repair.

The repository-level code generation task requires synthesizing code that satisfies task requirements while remaining consistent with the target repository context. Since real-world repositories often exceed the input length limits of LLMs, existing approaches commonly adopt retrieval-augmented generation (RAG) to provide repository-specific context. Despite improving repository-context retrieval, existing methods typically provide context as task-level support, without explicitly identifying the critical tokens that require fine-grained repository context during generation. During the autoregressive generation process of LLMs, errors often concentrate at a small number of decisive positions: once such tokens are generated incorrectly, subsequent code may follow an incorrect semantic path and eventually lead to functional failure. We refer to these positions as "critical tokens". In this paper, we propose ACToR, an adaptive critical token-aware retrieval framework for repository-level code generation. ACToR identifies critical tokens during generation and triggers targeted retrieval on demand to provide repository context at these decisive positions. In addition, we design a position-aware weighting method for dense retrievers to prioritize context that is more informative for generation. We evaluate ACToR on two representative repository-level benchmarks, RepoExec and CoderEval. Experimental results show that ACToR consistently outperforms state-of-the-art methods, achieving relative improvements of 8.4% on RepoExec and 15.4% on CoderEval. Beyond performance gains, we systematically quantify the impact of critical tokens, revealing their central role in major generation failures and highlighting the necessity of targeted retrieval strategies. We provide the code and data at https://github.com/DeepSoftwareAnalytics/ACToR.

Writing involves diverse cognitive activities, from ideation to revision, and writers' needs vary across individuals and moments. Proactive AI promises to provide the right support at the right time, yet existing proactive tools largely focus on generic textual assistance, such as autocomplete. This paper studies the design space of proactive thought partners: AI agents that proactively offer customizable, higher-level cognitive support during writing. We instantiated this concept in a technology probe and deployed it with 16 participants for one week. The probe allows users to create partners by configuring their roles and proactivity. As users write, relevant partners take the initiative at appropriate moments to offer suggestions. Our findings show that participants configured proactive support through prospective planning, used suggestions for both idea generation and self-monitoring, and valued lightweight visual representations alongside non-directive rhetorical framing for non-intrusive interventions. We derive implications for designing proactive writing assistants around customization, timing, engagement, and representation.

When a hint turns a failing generated program into a passing one, does it provide missing information or merely steer the model toward a solution it could already produce? We test these hypotheses on HumanEval+ and MBPP+ using executable evaluation. For Qwen2.5-3B-Instruct, adaptive relevant hints rescue 36 of 79 selected failures; an unrelated hint rescues 19, while eight unhinted samples solve 46 and recover 31 of the 36 relevant-hint rescues. Phi-3.5-mini shows the same pattern: relevant hints rescue 42 of 101 failures, an unrelated hint rescues 17, and unhinted sampling solves 57, including 36 of the 42 relevant-hint rescues. Because the hint conditions use different attempt budgets, these comparisons do not isolate a purely semantic effect. Mechanistic tests on Qwen identify a stable activation direction shared by relevant and unrelated hints. Persistently adding this direction yields 14 rescues and 18 regressions, with no detectable net accuracy gain; learned low-rank interventions have a positive but imprecise estimated effect. Full textual specifications solve 22 of 24 context-defined problems, versus 5-11 for tested virtual-KV prefixes. Post-generation hidden-state probes transfer across benchmarks, with pooled AUROC 0.806 and 0.780, but their top-one selection advantage over token confidence is statistically unresolved. Overall, relevant hints can rescue failures, but most rescued solutions are already reachable through ordinary sampling, and the internal interventions tested here do not establish task-general capability transfer.

Feedback-based coding schemes have demonstrated substantial performance gains over today's open-loop coding schemes. Unfortunately, these gains are usually achieved in idealized settings with perfect feedback. Over the last few years, machine learning-based schemes have been shown to be promising solutions for implementing feedback-based codes, particularly when combined with short-block-length open-loop error correcting codes (ECCs) in a concatenated coding structure. However, existing ML-based feedback schemes remain agnostic to the outer code's structure, potentially misallocating feedback resources on error patterns already correctable by the outer ECC. To address this, we propose MaskCode, a Transformer-based inner feedback code for concatenated coding systems, which explicitly incorporates structural knowledge of the outer linear block code into the inner feedback encoder design via two synergistic mechanisms: 1) a soft syndrome-based input that informs the encoder about potential parity constraint violations, and 2) a code-aware attention mask derived from the Tanner graph. We further show that end-to-end training with a differentiable belief propagation (BP) decoder offers no additional gain, as MaskCode's structure-aware design already internalizes the structural knowledge of the outer code; in fact, backpropagation through the iterative BP decoder introduces gradient explosion, which degrades rather than improves performance. Extensive evaluations on BCH and LDPC outer codes demonstrate that MaskCode consistently outperforms all baselines, achieving up to 1.5 dB SNR gain.

Code generation aims to automatically generate source code from task requirements and has attracted significant attention with the rapid advancement of large language models (LLMs). Despite remarkable progress, LLMs often struggle to generate correct code for complex software engineering tasks because task descriptions are frequently incomplete, ambiguous, or lack critical contextual information. Existing approaches primarily improve the capabilities of coding agents through more sophisticated tools, skills, and workflows, while largely overlooking the quality of the task requirements themselves. To address this limitation, we draw inspiration from software requirements engineering and propose WiseSpec, a novel requirements-driven agent framework for repository-level code generation. WiseSpec automatically constructs structured and information-rich requirements, assesses their quality through execution-based evaluation, and iteratively refines them to better guide code generation. Experimental results show that WiseSpec consistently outperforms all baselines, achieving an average improvement of 13.17% in %Resolved.

Industrial post-training is a brownfield regime. Teams inherit a deployed checkpoint and must land targeted improvements under fixed compute and mixture budgets without regressing the rest. The maintained artifact is increasingly dataware: behavior governed by a curated post-training mixture, updated via bounded mixture patches rather than clean-slate retraining. From an industrial code-generation improvement effort, we offer a maintainer's perspective on why this work is hard in practice, distilling three recurring challenges, zero-sum mixture design, yield as the binding metric, and end-to-end integration under uncertainty, and arguing that progress depends less on one-off recipes than on an engineering discipline for programming dataware. In our case study, interventions that raised the conversion of teacher distillation into usable training data increased accepted supervision by 2.84 times while using the same solution teacher and four solution attempts per candidate problem. In our primary evaluation, the yield-engineered patch improved CodeForces pass@1 by +2.59 points (+3.11 pass@3) and held-out LiveCodeBench v6 pass@1 by +6.11 (+8.05 pass@3), all statistically significant across 16 stochastic evaluations of each benchmark from one fixed checkpoint per condition, with internal AIME and MATH regression suites within tolerance.

Large language models (LLMs) frequently generate source code containing vulnerabilities, yet little work studies the internal mechanisms that distinguish safe from vulnerable generation in them. In this work, we systematically perform a mechanistic interpretation of LLMs, aiming at both understanding how code safety-vs-vulnerability is represented or driven by components in an LM and turning the insights into actionable steering strategies to encourage safer code generation. To this end, we introduce CodeSec-Pairs, a dataset of 9,342 Python safe-and-vulnerable contrastive code pairs, sampled from Llama-3.1-8B-Instruct. Utilizing the dataset, we explore approaches to localize layers and attention heads that relate to code safety, and further experiment with different steering strategies for inference-time vulnerability reduction. In particular, we propose DuoSteer, a double-steering approach that simultaneously applies safety and code-correctness steering to attention heads. In experiments over five vulnerability types, DuoSteer leads to an average of -26.9% vulnerability rate reduction and +7.5% functional correctness improvement, which outperforms not only other steering variants but also prompting and supervised fine-tuning baselines. The advantage also replicates on Qwen-2.5-Coder-7B-Instruct with another 2,500 contrastive pairs sampled from that model.

Interactive web application generation requires models to produce usable HTML, CSS, and JavaScript applications from natural language requests. Unlike conventional code generation, application quality depends on multiple user-facing functional requirements, each often tied to localized code regions such as event handlers, state updates, DOM fragments, or CSS selectors. Standard GRPO collapses these structured outcomes into a single sequence-level reward and applies the resulting advantage uniformly to all tokens, weakening credit assignment. We propose \textbf{Rubric-to-Code Credit Assignment} (RCCA), a reinforcement learning framework that converts rubric-level functional feedback into localized optimization signals over generated code. RCCA builds training tasks around explicit functional rubrics, uses a hierarchical reward to separate format, source-code, runtime, and functional failures, and aligns evaluator-generated textual attributions with responsible code spans and generated tokens. The resulting model, \textbf{Ling-RCCA-Flash}, scores 41.25 on MiniAppBench, improving Ling-3.0-Flash by 32.20 points and slightly surpassing Claude Opus 4.5. It also reaches 76.19 on ArtifactsBench, improving the SFT model by 4.48 points and establishing a new top score under the official ArtifactsBench leaderboard setting by surpassing the GPT-5 score by 3.64 points, suggesting transferable implementation-level gains.

With the rapid advancement of large language models (LLMs), research idea generation has attracted increasing attention. Existing approaches enable LLMs to retrieve relevant literature and propose novel ideas for research areas. However, current evaluation practices for idea generation remain fragmented and lack objective standards, often relying on direct LLM scoring, which limits their ability to provide unified and reliable assessments across a coherent distribution of generated ideas. To address this challenge, we propose LigBench, an automated evaluation benchmark that enables fine-grained and reliable evaluation of AI research ideas, consistently applicable across different generation distributions. In addition, we introduce PAIR-IQ, a dataset tailored for training pairwise idea judgment models and serving as an auxiliary reference to support more objective comparative evaluation. Extensive experiments demonstrate that LigBench achieves stable and interpretable evaluations, significantly improving alignment with expert judgments. Furthermore, models trained on PAIR-IQ exhibit enhanced ranking accuracy and robustness, establishing a principled standard for scalable and objective research idea assessment.

The extent to which large language models for code rely on memorization over genuine understanding remains highly debated. While current literature frequently reports widespread memorization, evaluating the underlying probing techniques across dense architectures reveals a severe breakdown in their utility at scale. Traditional encoder-style probes using perturbations such as synonym fuzzing or dead-code insertion struggle to expose memorization in scaled models, even on known-contaminated benchmarks, and decoder-style probes that rely on log probabilities show similar performance degradation. The specific mode of failure for these probes, particularly why such techniques disrupt smaller models but fail to impact larger ones, motivates us to untangle representation load from memorization rather than treating them as a single phenomenon. By applying invertible mathematical transforms to numeric problems, we isolate these two factors and reveal that scaled encoders successfully absorb substantial representation load while still converging on the correct family of solutions. In practical software engineering, this ability to adapt to varying surface forms is what truly matters for usability and generalizability in LLM and agentic applications. Whether a specific solution was seen during training becomes a much less pressing question because although memorization inflates scores on contaminated benchmarks, factoring out representation load makes it debatable how much we should truly care if a functional answer was originally memorized. Future evaluations must therefore be built around separating these phenomena rather than relying on methodologies that quietly entangle them.

Existing screenshot-to-code systems face a trade-off between flexibility and controllability. Direct multimodal generation can hallucinate visible details, whereas structured pipelines reduce such errors through component-wise decomposition, predefined templates, and customized intermediate representations. These structures, however, introduce additional generative orchestration and restrict outputs to designs covered by the representation. We investigate whether selective tool grounding can improve the fidelity--efficiency trade-off of direct widget-to-code generation. We introduce \textbf{WidgetGen}, a lightweight tool-grounded framework that extracts observable text and color evidence, performs high-level layout and optional chart reasoning, and directly generates executable JavaScript XML (\emph{JSX}). This design reduces reliance on component-wise generation while avoiding a fixed UI schema. Across six multimodal models and $1{,}000$ held-out widgets, WidgetGen outperforms direct prompting and the structured Widget2Code pipeline on most visual reconstruction metrics, with consistent gains in area, legibility, and style. Finally, reconstruction-derived image-code pairs improve six Qwen-family open-weight models across every reported metric through supervised fine-tuning. These results establish WidgetGen as a strong lightweight baseline and show that selective evidence grounding offers an effective alternative to extensive representation constraints.

Turning a research idea into a complete paper requires more than text generation: the system must retrieve literature, design and execute experiments, revise claims according to evidence, produce publication-ready figures, and maintain consistency across a long generation process. We present Spark-to-Paper, an end-to-end research paper generation system implemented as thirteen composable skills inside an existing coding assistant, without requiring a separate agent platform or orchestration service. Spark-to-Paper separates model-based judgment from deterministic operations that can be directly executed and checked. It further separates experiment planning from reporting, so that required evidence is specified before results are observed and manuscript claims are revised according to measured outcomes. To improve reliability over long research trajectories, the system combines deterministic integrity checks with self-critique and bounds a failure mode we call the Self-Refutation Loop, in which repeated experiments continue to reject the original research objective. Spark-to-Paper also produces editable vector figures through programmatic plotting for experimental results and code-based reconstruction for generated method diagrams. Across eight controlled research topics, Spark-to-Paper achieves 99.5% citation validity and 96.4% figure editability. A controlled ablation increases fabrication detection from 14% for a single-pass draft to 92% with the full integrity and review stack, while adversarial review achieves 74% precision. The full system uses 11.9M tokens, costs $8.1 per manuscript, and requires 3.2 hours on average. These results show that end-to-end research paper generation can be implemented as a lightweight, composable workflow inside existing coding assistants while keeping experimental evidence central to how claims are accepted, revised, or abandoned.

Large Language Models (LLMs) are increasingly integrated into software engineering workflows, helping developers write, debug, test, and maintain code. While prompt wording and structure are known to influence model performance, the impact of psychologically inspired prompt framings remains unexplored. This study investigates whether different psychology-based communication strategies that humans use to persuade or motivate others can lead to more effective prompt framing, which may, in turn, affect LLM behaviour in coding tasks. Drawing on Yukl & Falbe's well-known taxonomy, we operationalized eight influence tactics (like rational persuasion, ingratiation, and exchange) into reproducible prompt templates. These prompt templates were evaluated across five leading open-weight LLMs using two widely adopted benchmarks: LiveCodeBench and SWE-bench Verified. We assessed the resulting code output on four key software quality dimensions: functional correctness, quality, maintainability, and security. Our results show that certain influence-induced prompt framings, particularly those emphasizing urgency, were associated with reduced correctness and security. This work presents the first large-scale empirical study of influence-induced prompt framing in software engineering tasks, offering insights into how linguistic cues may shape LLM outputs. We conclude with practical insights for designing transparent and interpretable human-AI interactions in code generation.

Large Language Models (LLMs) have undergone a shift from stateless conversational interfaces to autonomous agents capable of multi-step planning, tool invocation, code execution, and maintaining persistent memory. When these agents operate with real-world privileges---calling APIs, modifying files, and querying databases---a compromised reasoning step can trigger unauthorized data access, irreversible state changes, or cascading failures, yet the security research community has not kept pace. To quantify the state of the field, we conducted a systematic literature review under PRISMA 2020 guidelines across six databases, screening 743 records and retaining 85 papers (2023--2025) on agentic LLM security. Attack research outpaces defense work by 3.9:1. Perception-layer vulnerabilities (prompt injection, jailbreaking, adversarial perturbations) dominate, accounting for 66% of papers, while action-layer vulnerabilities (tool misuse, code injection, sandbox escape) appear in only 4.7%, misaligned with real-world risk. Code execution security accounts for 3.5%, and tool-augmented agents 12%. We contribute a four-layer taxonomy mapping 13 vulnerability types across perception, brain, action, and interaction layers, and identify seven open problems centered on containment. Agentic LLM insecurity stems from architectural coupling, where weak isolation allows vulnerabilities to propagate across layers.

Verified code generation asks a large language model (LLM) to generate both an executable program and a machine-checkable proof that the program meets a formal specification, promising software that is correct by construction. The de facto workflow decouples the two halves of the problem: first synthesize a program, then attempt to prove it correct. We observe that this sequential pipeline can be both ineffective and inefficient in practice. A program generated without anticipating its proof can be subtly incorrect or structurally difficult to verify, forcing the LLM into brittle repair loops that alternate between patching the code and patching the proof. Inspired by Dijkstra's view that a program and its correctness argument should be developed hand in hand, we propose $P^3$, an LLM-based agentic workflow that first derives a unified program-and-proof plan from the specification, then elaborates the implementation and proof scaffold under this shared plan. To evaluate verified code generation in realistic settings, we further introduce Lean4Commit0, a repository-derived, library-level benchmark built by extracting core APIs from real-world software repositories and translating their requirements, including relational specifications across APIs, into Lean tasks. Using four frontier LLM backends, we evaluate $P^3$ on Verina, AlgoVeri, and our Lean4Commit0 benchmark, where it achieves the highest solve rate in every benchmark--model setting. Compared with the stronger baseline, it improves solve rates by 4.6--11.2 percentage points and reduces per-task API cost by up to roughly 40% and wall-clock time by up to roughly 37% on the difficult subset of each benchmark. A targeted ablation further shows gains of 3.3--8.3 points over implementation-only planning, isolating the benefit of planning the program and proof jointly.

Large language model-powered coding agents are increasingly used to modify existing code repositories, for example, by adding features or fixing bugs. Yet existing repository-level benchmarks typically evaluate only whether the final patch passes tests. Satisfying a user request requires a long chain of interdependent reasoning and decisions: an agent must recover explicit and implicit requirements, formulate a repository-grounded implementation plan, and translate it into correct code. A pass/fail outcome cannot characterize how an unsuccessful trajectory diverges from the requirements and implementation process needed for a correct patch. To address this gap, we introduce SWE-RPG, a repository-level benchmark that combines executable patch evaluation with validated ground-truth references (GTs) for (1) Requirement Clarification and (2) Implementation Planning. These intermediate GTs support retrospective, GT-aligned diagnosis of complete coding-agent trajectories across clarification, planning, code generation, and artifact submission. SWE-RPG comprises 163 tasks from 31 Python and Java repositories, including 113 bug fixes and 50 feature additions. We evaluate 3 coding agents, including Claude Code, Codex, and OpenCode, with 6 large language model backends, including Claude-Sonnet-5 and GPT-5.6-Terra. Results show that the evaluated popular coding agents still struggle to implement user requests in existing repositories, achieving an average resolved rate of only 31.5% on SWE-RPG. Intermediate-GT diagnosis further identifies implicit requirement recovery as the main bottleneck, accounting for 24.5%--46.0% of agent runs. This result suggests implicit-requirement recovery as a key candidate direction for improving coding agents. The benchmark data and evaluation code are available at https://github.com/Xin-Zhou-smu/SWE-RPG-Bench.

Contribution: This paper presents a six-phase AI-assisted instructional design architecture based on the Curriculum as Code paradigm, integrating Generative AI with LaTeX and Python to automate the creation of reproducible, visually consistent, and technically precise materials for STEM education. Background: Creating customized instructional materials for active learning imposes a heavy workload on faculty. Standard presentation tools lack robust support for technical content, while current AI applications often hallucinate and fail to formalize the instructional authoring process, limiting their utility for rigorous academic design. Intended Outcomes: The framework aims to reduce preparation time while ensuring mathematical accuracy, adherence to institutional visual identity, and preservation of the instructor's tacit pedagogical knowledge through explicit rules. Application Design: The solution comprises a six-phase pipeline that replaces ad-hoc prompt engineering with a systematic workflow, utilizing text-based interfaces and code-driven generation (LaTeX/Beamer for slides, Python for figures), governed by pedagogical constraints, contextual calibrations, and automated review cycles. Findings: Validated over one year across 8 modules and 28 project contexts in a Project-Based Learning environment, the architecture significantly reduced instructor workload. Generated assets underwent independent peer review and were deployed by six different faculty members, confirming scalability beyond a single author. Based on over 600 voluntary student evaluations, materials achieved high quality ratings from 8.5 to 9.9/10. Results indicate high reproducibility, minimized hallucinations, and sustained pedagogical and visual fidelity, suggesting viability for broad STEM educational applications.

The widespread integration of AI coding assistants offers undeniable boosts to engineering velocity. Yet, recent studies point to a growing trade-off, revealing persistent challenges with code quality and maintainability. Industry leaders, including frontier AI labs, echo these concerns. As large language models are increasingly relied upon to author production code, understanding their impact on shipped software quality has become a critical priority. However, assessing these effects in industrial workflows remains difficult due to observability barriers. We study the impact of AI-generated code on production quality within a large enterprise operating global products relied upon by billions of users daily. Driven by this scale and user trust, the organization values code quality and has built thorough observability for every line of code deployed into production, enabling us to overcome measurement barriers to assess these effects. This study presents a large-scale empirical analysis of AI-generated C++ code from April 2025 to April 2026, tracking 3.52 million code changes across this enterprise's brownfield codebase. The core purpose is to understand the quality, performance, and maintenance characteristics of AI-generated code compared to human-written code in a production environment at scale. We find that AI-generated C++ code has a distinct quality profile, showing higher rates of interface and coupling burdens, copy and allocation overheads, and a reliance on explicit loops over optimized standard APIs. These issues translate into tangible downstream costs, including increased review effort and a 5-8% increase in compute resource consumption. However, we demonstrate that providing models with targeted, taxonomy-informed feedback can mitigate these effects, leading to an 11.1% reduction in targeted static analysis warnings and improved computational efficiency.

Text-to-CAD generation translates natural-language design intent into editable and executable parametric computer-aided design (CAD) codes, reducing the expertise and effort required for manual modeling. Existing methods incorporate fixed, externally supplied, prompt-induced, or separately optimized critique mechanisms to optimize the generation process, but they do not necessarily optimize how feedback is interpreted and translated into effective corrective actions throughout the generation process. To bridge this feedback-utilization gap, we present RA-CAD (ReAct Agent for CAD), a state-aware agent that interacts with the CAD environment through a Generate--Execute--Critique--Rewrite loop. At each iteration, RA-CAD executes the current code and observes its outcome. Conditioned on the design instruction, current code, and execution feedback, the agent then generates an explicit post-execution critique as an intermediate policy action. This critique either validates the current result for termination or provides revision-oriented guidance that conditions the next rewrite. CAD Code Bootstrapping (CCB) first establishes fundamental parametric CAD coding capabilities through supervised fine-tuning. Feedback-Driven Agent Optimization (FAO) subsequently applies trajectory-level Group Relative Policy Optimization to both policy-generated code and critique sequences, assigning terminal F1 and Chamfer Distance rewards to the complete interaction trajectory. This formulation makes critique an outcome-aligned, learnable policy decision rather than an unoptimized auxiliary output. Experiments on CADFusion and Text2CAD show that RA-CAD achieves state-of-the-art execution validity and geometric quality compared with existing methods and strong proprietary language models, demonstrating the effectiveness of the proposed state-aware text-to-CAD agent.

Large language models (LLMs) have made notable progress in code generation, but they still struggle on challenging tasks that require sophisticated algorithms or complex implementations. Recent methods increasingly use code execution as feedback, especially in self-correction pipelines that construct verification signals from generated code. However, these pipelines often depend on supervision signals whose reliability is unknown, which can introduce misleading feedback, unnecessary revisions, and incorrect final answers. To address this issue, we propose ExeCRE, an Execution-Consistency guided code Reliability Estimation framework. Instead of judging candidate code by tests or LLM feedback, ExeCRE estimates code reliability by statistically analyzing consistency patterns in execution outputs over a large number of randomly generated inputs. It collects execution outputs over generated inputs, projects them into consistency signals, and applies the Dawid-Skene model to infer latent code reliability. We integrate ExeCRE into self-correction for code generation. Experiments show that ExeCRE consistently improves both effectiveness and stability, while substantially reducing misleading correction signals. Under GPT-5.2 on LiveCodeBench, the average number of misleading feedback cases on already correct code drops from 113.2 with a representative self-correction baseline to 14.0 with ExeCRE. As an additional study, we apply the same reliability estimation strategy to code-based mathematical reasoning and observe similar benefits. These results suggest that ExeCRE enables more reliable use of generated code in execution-based pipelines.

Neural PDE solver auto-design is fundamentally a search-space representation problem. In the space of unrestricted Python programs, valid solvers form an extremely sparse subset: most candidate programs are syntactically incorrect, semantically incompatible, or numerically unstable. Direct code generation therefore forces an LLM to spend most of its search capacity navigating implementation failures rather than reasoning about solver quality. ADSL-PDE addresses this challenge by introducing a structured search state between solver concepts and executable code. It represents the functional decisions that determine a neural PDE solver (architecture, physical constraints, objectives, sampling, and optimization) while abstracting away low-level implementation details. A deterministic compiler maps each valid search state to an executable solver. In effect, ADSL-PDE reshapes the search space: it removes large regions of invalid programs, increases the density of meaningful candidates, and preserves the compositional freedom needed to discover previously unseen designs. Solver evolution can thus operate over design decisions rather than code artifacts. Built on this representation, our evolutionary agent iteratively proposes, evaluates, and refines solver search states using empirical feedback. Across multiple PDE benchmarks, ADSL-PDE improves both search efficiency and optimization stability, achieving an improvement of more than 52% within the first ten evolution iterations. These results suggest a broader principle for LLM-driven auto-design: effective agents do not merely require stronger reasoning, but rather a search representation that concentrates exploration on valid and consequential decisions.

Code generation systems make each LLM call with a model, a prompt, and decoding settings. However, existing optimization methods usually tune only part of these choices or use one fixed configuration for all tasks: global optimizers search one configuration for all tasks, routers choose only a model, and prompt optimizers keep the model and decoding settings fixed. This leaves their joint, group-specific interactions unclear. We therefore examine how these choices interact and observe that prompts and decoding settings interact, tuning effects vary by model, and the best configuration varies by task difficulty. Guided by these observations, we introduce COMPAS (Code-generation Optimization over Models, Prompts, And Decoding Settings), a difficulty-aware method that learns group-specific quality-cost fronts through low-cost model selection and joint prompt-decoding search, then routes each test task to its matching front online without further search. Under a matched search budget on LiveCodeBench, COMPAS improves pass@1 from 45.9% for the best baseline to 52.8% while reducing cost from $36.57 to$4.92. This also transfers to repository-level code generation on SWE-bench, resolving 76.0% of tasks versus 70.0% for the best baseline. Code and the reproducibility artifact are available at https://github.com/gjz78910/COMPAS.

Benchmarking the ability of AI scientists to generate novel ideas is notoriously difficult. Existing benchmarks in this field have made progress in evaluating scientific reasoning and research replication, but often rely on synthetic tasks or retrospective targets, which may be confounded by prior exposure. We hypothesize that complex, adversarial, fast-moving real-world domains where expert practitioners independently generate observable outputs can provide a practical solution to fill this gap and evaluate the capabilities needed for AI scientists, including reasoning, novelty, and hypothesis formulation. We instantiate this framework in two structurally different domains, Formula 1 (F1), where models ideate around car design concepts for the 2026 season, and real pre-season innovations provide a ground truth, and Magic: The Gathering (MTG), where models propose decks from a recently updated card pool and are evaluated against 19 Pro Tour (PT) decklists. Across both domains, models produce plausible outputs, but few align with real-world expert solutions. In F1, the best model, GPT-5.2 matched 10 of 40 real innovations with 166 ideas proposed across runs. In MTG, the best deck from Gemini 3 Flash recovered 5 of 7 new-set cards from the third-place PT deck, and across all 108 decks, the cards models selected most often were also the cards most widely adopted by PT decks (Spearman $ρ= 0.74$, $p = 0.0003$). These results suggest that a key capability gap for AI scientists is not idea generation, but filtering, prioritization, and coherent novelty.

Large language models (LLMs) have substantially improved code generation, yet achieving strong functional correctness remains difficult, especially for heterogeneous programming tasks where a single prompting strategy and a single directly generated output are often insufficient. In this paper, we present RAV, a lightweight and modular framework that improves code generation with a fixed backbone model through three coordinated stages: Route, which applies task-aware prompt routing before generation; Align, which reduces the mismatch between fine-tuning prompts and inference-time prompts through aligned LoRA adaptation; and Verify, which selects the final output by executing multiple candidates against visible public tests. We evaluate RAV on the MBPP benchmark under both the sanitized and full settings. The complete RAV pipeline achieves the best performance among all evaluated configurations, reaching 0.8911 on MBPP Sanitized and 0.8520 on MBPP Full. Compared with the base model, these results represent improvements of 6.35 and 9.92 percentage points, respectively. Component-wise ablation experiments further show that task-aware routing and aligned adaptation become substantially more effective when combined with execution-based verification. Additional robustness and contamination analyses support the reliability of the observed improvements. Overall, the results indicate that functional correctness in code generation can be meaningfully improved without modifying the backbone architecture, by jointly optimizing how tasks are prompted, how the model is adapted, and how final outputs are selected.

LLM-based repository-level code generation aims to generate code using the context available in a software repository, requiring LLMs to reason over complex code dependencies. Due to limited context windows and insufficient repository-specific understanding, LLMs typically rely on retrieval-augmented generation (RAG) to incorporate relevant code. Early RAG approaches primarily employ similarity-based retrieval, which often fails to retrieve code snippets that the target function depends on. Recent work introduces graph-based retrieval to model such dependencies, but typically relies on manually designed rules and static global graphs, leading to limited flexibility and high construction and maintenance costs. In contrast, human developers collect helpful context by implicitly constructing a partial dependency graph and iteratively inspecting along it. Inspired by this behavior, we propose DyRetriever, an efficient context retrieval method via partial dependency graphs. DyRetriever uses an LLM to first select a set of entry-point functions and then perform multi-hop reasoning along the code dependency graph. During multi-hop reasoning, it uses the LLM's semantic understanding to validate whether a function can help generate the target function, eliminating manually designed rules and enabling flexibility across scenarios. Instead of statically constructing a global dependency graph, DyRetriever builds a partial graph on demand and discards it after use, reducing construction and maintenance costs. We integrate DyRetriever with a similarity-based code retriever to build DyCoder and evaluate it on CoderEval and DevEval. Experimental results show that DyCoder achieves relative Pass@1 improvements of 25.63% and 59.73% on CoderEval and DevEval, respectively, compared with existing RAG-based methods, while being 7.4x faster than baselines based on static dependency graph construction.

Post-training large language models (LLMs) via reinforcement learning (RL) has significantly advanced code generation capabilities. To bypass the heavy memory footprint of critic networks, current state-of-the-art frameworks leverage critic-free paradigms like Group Relative Policy Optimization (GRPO) tied to rule-based verification sandboxes. However, applying these frameworks to low-level systems programming, such as CUDA kernel generation-presents severe challenges: binary pass/fail rewards introduce severe signal sparsity, while multi-turn environmental feedback loops suffer from prohibitive compilation latencies and reward dilution across trajectories. In this work, we introduce LEAP (Lean Environment-Feedback via Adaptive Pruning), a scalable and computationally efficient multi-turn RL framework optimized for low-level hardware accelerator alignment. LEAP features Difficulty-Conditioned Pruning (DCP), a dynamic gating mechanism that adaptively cuts off simple and overly catastrophic tasks from multi-turn expansion, focusing resource-heavy compilation and hardware exploration exclusively on high-value, complex tasks. To fully operationalize these paths without manual hyperparameter engineering, we propose a Rank-Based Reward formulation. By deriving scale-free relative advantages from pairwise tournament outcomes within the GRPO rollout group, our method inherently penalizes token inefficiency on simple prompts while maximizing learning gradients on challenging distributions. Empirical evaluations show that LEAP achieves superior first-turn proficiency and robust multi-turn debugging resilience while converging faster than unpruned multi-turn baselines, establishing a practical paradigm for low-level code RL.

However, whether these judges truly evaluate the scientific substance of ideas or are influenced by superficial stylistic presentation remains an open question. To address this question, we propose SciStyleBench, a unified three-component benchmark for diagnosing and mitigating stylistic bias in LLM-based idea evaluation: (i) First, SciStyleStage, a three-stage evaluation environment that applies controlled stylistic perturbations to fixed scientific content across three settings no context, fixed-domain context, and open-domain retrieval context, covering 600 scientific ideas and 15 style variants, with 9,000 evaluation instances per setting; (ii) Second, SciStyleMetrics, a set of quantitative measures, including Style Bias Index (SBI), Substance Recognition Rate (SRR), and Adversarial Win Rate (AWR), to characterize how stylistic variation affects scoring stability, substance discrimination, and ranking robustness; (iii) Third, SciStyleExtractor, a plug-and-play evaluation module that separates presentation style from scientific content by predicting style type and deviation before style-conditioned evaluation, enabling us to assess whether style awareness reduces stylistic bias. Experiments on SciStyleBench show that direct LLM judges remain sensitive to writing style and struggle to distinguish scientific substance. In contrast, SciStyleExtractor reduces SBI from 0.566 to 0.501 while increasing SRR and AWR from 0.504 and 0.554 to 0.759 and 0.899, respectively. These results suggest that robust idea evaluation requires invariance to stylistic variation without sacrificing sensitivity to scientific substance. Overall, SciStyleBench provides a systematic framework for identifying, quantifying, and mitigating stylistic bias in scientific idea evaluation.

Cloud misconfiguration remains a leading cause of security incidents, yet whether LLMs and SLMs can generate security-compliant Infrastructure-as-Code is an open question. We benchmark seven models, three closed LLMs (Claude Opus 4, GPT-5.4, Gemini 2.5 Pro) and four open SLMs (Qwen2.5-Coder-14B, WizardCoder-33B, CodeLlama-13B, Magicoder-S-CL-7B), on AWS Terraform generation across 17 scenarios, integrating Checkov and Trivy scanners into a GitLab CI/CD pipeline and evaluating two prompt strategies at three security levels (pass@5). Syntactic validity and security compliance are largely orthogonal properties in LLM-generated IaC, a model that reliably produces well-formed Terraform does not necessarily produce secure Terraform: WizardCoder-33B achieves 77.8% validate rate yet zero Checkov compliance, while Claude Opus 4 reaches 23.1% Checkov and 92.5% Trivy pass rates under detailed security prompting. Consequently, prompt engineering alone is insufficient: automated multi-tool scanning remains a necessary complement to LLM-assisted IaC generation regardless of model family or prompt strategy. All artifacts are publicly available.

Multi-turn code agents rely on execution feedback to repair incorrect programs, yet standard reinforcement learning paradigms optimize and evaluate policy performance primarily using single-shot outcome rewards. This misalignment conflates initial code generation with feedback-driven refinement, discards granular execution signals across intermediate turns, and fails to evaluate whether the policy actually acquires self-repair capabilities. We propose Test-aware Policy Refinement (TaPR), a framework that transforms execution feedback into a dense per-turn test-pass-ratio reward under a consistent multi-turn interaction protocol. Across six models on 219 code-generation problems from LiveCodeBench, TaPR improves the pooled three-turn success rate (Pass@3) by 2.44 percentage points. In the predefined 7B/8B high-headroom slice, pooled accuracy increases from 30.25% to 33.56% (+3.31 pp), with 42 improvements and 13 regressions in paired trials. On a matched Qwen3-8B ablation, the dense reward supplies nonzero feedback in all of the first ten steps and reaches a higher Hard-subset peak than outcome-only GRPO within the tested budget, although GRPO nearly matches pooled Pass@3 by step 300. Our primary contribution is a reward-decomposition framework and a turn-aware evaluation protocol that decouple first-shot generation quality from multi-turn repair competence.

Fortran has been the cornerstone of high-performance computing for decades and remains unmatched in many domains. Yet the language faces an expertise gap: a new generation of scientists is barely familiar with it, while many experienced Fortran developers are only now transitioning to modern ecosystems such as JAX. This gap often results in "Fython" - Python code written with a Fortran mindset - that fails to leverage modern frameworks. We present FGPT, a transpiler framework designed to bridge this gap. It provides a systematic pipeline that transpiles Fortran into GPU-adapted Fortran, auto-differentiable Fortran via Tapenade, or NumPy and JAX scripts. Its architecture comprises three stages: (i) a frontend that parses Fortran and extracts target procedures along with all their dependencies; (ii) a middle-end that lowers the code into an intermediate representation, then into GPU-adapted or auto-differentiable Fortran, or a NumPy class; and (iii) a backend that transforms NumPy scripts into JAX modules optimized for GPU acceleration and automatic differentiation. Large language models fail when applied to the scale of community scientific codes-often spanning hundreds of thousands of lines-where consistent transformations, strict numerical fidelity, and validation against production tests are non-negotiable. FGPT addresses these challenges by preserving program semantics throughout the entire translation. We verified the framework on representative climate modeling kernels and demonstrated that it produces correct, differentiable Python implementations without requiring manual intervention. By combining rigorous compiler techniques with modern accelerator support, FGPT offers a scalable, trustworthy path for modernizing legacy Fortran code.

Quantum software engineering is an emerging research field focusing on efficiently embedding the quantum programming paradigm into existing software ecosystems. A key aspect of this field is the realization of quantum algorithms using gate-based programming and the subsequent low-level optimization of the resulting quantum circuits, a process that is commonly performed by so-called transpilation pipelines. One significant challenge in these pipelines is determining which optimizations to apply to a given circuit. This decision is usually based on fixed default configurations that are uniformly applied to all circuits, frequently resulting in missed opportunities for more aggressive circuit optimization. In this work, we tackle this challenge by applying autotuning with supervised machine learning to develop an automated method for selection of transpiler passes. To train our machine-learning models, we employ feature-model based sampling to generate a representative dataset that examines how different combinations of Qiskit transpiler passes perform across thousands of circuits drawn from the state-of-the-art benchmarking suite MQT Bench. Using these data, we build a predictive model extension for the Qiskit transpilation pipeline that uses a machine learning model to automatically select combinations of transpiler passes aiming to achieve a maximum reduction in two-qubit gates. Our empirical evaluation shows that the combinations selected by our model are never outperformed by Qiskit's optimization levels, achieve on average an additional 19.1$\%$ - 32.4$\%$ reduction in two-qubit gates, and for some circuits finds reductions of up to $95.8\%$ in cases where Qiskit achieves no reduction at all.

Large language models (LLMs) are increasingly required to integrate multiple sources of information that may be inconsistent or conflicting. However, there is still a lack of controllable and attributable methods for analyzing how models resolve conflicts between competing specifications. We propose a controlled experimental framework for studying model preferences under conflicting specifications. By constructing specifications with explicit conflicts, the framework enables model choices between competing specifications to be directly observed and analyzed. A symmetry-based design further reduces confounding factors, allowing preferences across representation types to be compared systematically. We evaluate the framework on an executable mathematical benchmark with 550 conflict instances spanning 11 function families, comparing four representation types: pure natural language, formal language, naturalized formal language, and input--output examples. Results show systematic preference patterns rather than random behavior, with a consistent ordering: $\text{Formal} \approx \text{Naturalized Formal} > \text{Pure Natural Language} > \text{Input--Output Examples}$. Example effects further depend on model capability and function family. We extend the framework to heterogeneous specification conflicts in Boolean algebra, code generation, and the clinical domain, demonstrating its applicability across diverse tasks and specification forms. The framework provides a unified approach for measuring how LLMs resolve conflicts between competing sources of information.

Large language models benefit from elements in natural language, such as metaphors and analogies in training data and inference input to achieve generalisability across different domains. However, these language elements may also lead to unwanted behaviors when metaphorical expressions implicitly transfer inappropriate procedural patterns into new tasks. In this paper, we show that metaphorical instructions can induce analogical transfer of procedural mechanisms, thus steering code-generation models towards less efficient algorithms. We refer to this metaphor-induced effect as metaphorical algorithmic steering: a skill that is benign and plausible within its source domain transfers an abstract procedural schema into a programming task, causing the model to favor exhaustive search, full scans, or repeated reconstruction without explicitly mentioning the target algorithm. More broadly, this suggests that code-generation models can carry procedures that are appropriate in a task's background domain into the task's programming problem, where they can lead to unwanted outcomes. To study this phenomenon, we develop MASC (Metaphorical Algorithmic Steering for Code Generation), a framework that iteratively metaphorizes and refines benign skills to elicit low-efficiency code while remaining benign and task-relevant. Beyond behavioral evaluation, we study whether this phenomenon is detectable and mechanistically reflected in model representations. Our method achieves high detection rates for metaphorical skills and less-efficient implementations. We also find that metaphorical skills induce a hidden-state shift towards lower-efficiency procedural behavior prototypes. These results suggest that metaphorical algorithmic steering operates through the transfer of procedural patterns associated with metaphorical source scenarios rather than surface level metaphorical language alone.

Recovering Parametric CAD sequences from raster-format 2D Computer-Aided Design (CAD) drawings accumulated prior to digital transformation is important for part reproduction and manufacturing process automation. However, existing studies either process only vector drawings or are limited to specific domains, and fail to explicitly connect dimensional annotations to geometric information, limiting their use of dimensional information for 3D Parametric CAD sequences recovery. We propose Drawing-Recode, a framework that generates Parametric CAD sequences as CAD code from raster 2D CAD drawings. Drawing-Recode extracts geometric features via an image encoder and recognizes annotations through a separate text recognition module, then explicitly grounds annotations to geometric information using cross-attention and our proposed Annotation Grounding Loss (AGL). The resulting features are fed into a Large Language Model (LLM) to generate CAD code in the Structured Parametric CAD Code (SPCC) format. Experiments show that Drawing-Recode outperforms existing baselines and remains robust on scanned drawings resembling industrial conditions. We expect Drawing-Recode contributes to digitizing raster 2D CAD drawings in industrial settings and to part reproduction and manufacturing automation.

Code models are increasingly trained with execution feedback, but most training signals still stop at correctness. This leaves an important gap for systems code: two programs can pass the same tests while differing greatly in runtime. We study how to train code agents to prefer faster correct implementations, rather than treating efficiency only as an evaluation metric. The key difficulty is that runtime is a fragile reward. It is meaningful only after a program is correct, varies across tasks, and gives little guidance when most sampled programs fail to compile or run. We propose \textbf{RLPF}, reinforcement learning from performance feedback, which turns execution outcomes into a staged reward. Failed programs are ordered by execution progress, while correct programs are ranked by their relative improvement from the baseline toward the expert reference. This gives useful feedback before correctness and performance-sensitive feedback after correctness. Fine-tuning Qwen3-32B with RLPF on PerfCodeBench raises correct-and-runnable solutions from $11.1\%$ to $54.6\%$ and improves relative efficiency from $8.1\%$ to $38.6\%$. The trained model becomes competitive with stronger open-weight systems, and its optimization behavior transfers modestly to EffiBench-X. Additional studies show that model-generated references provide useful but weaker supervision, and that the full composite reward is more reliable than correctness-only or runtime-only baselines. These results suggest that code agents can be trained not only to pass tests, but also to optimize the programs they write.

Many discrete reasoning tasks, such as code generation, are inherently non-causal: programmers move between high-level structure and local details, a process we call any-order inference. For autoregressive language models, which lack a native any-order interface, non-causal abilities such as infilling and next-edit prediction require hand-designed mechanisms. Can we instead design models that natively support any-order inference? Masked diffusion models have recently emerged as compelling candidates, as their any-order training objective naturally offers an any-order prediction interface. This interface, however, does not automatically yield any-order inference. We demonstrate that this interface-inference gap stems from positional uncertainty: fixed-canvas, token-level models may know what semantic component should appear without knowing where to place it. In light of this, we propose two complementary approaches: (1) Insertion-based masked diffusion, building on FlexMDM (Kim et al, 2025), relaxes fixed-position commitments via insertions, enabling generation across non-contiguous regions. (2) Latent-space masked diffusion shifts prediction to coarser semantic segments, enabling search over latent generation orders. Empirically, we train a 7B FlexMDM for Python coding and a 125M LatentMDM for GSM8K and show that both approaches induce distinct any-order inference behaviors and improve downstream performance. We release our codebase at https://github.com/SeunggeunKimkr/genuine-any-order.

Contemporary LLM-based coding agents produce code as black-box outputs: the rationale behind each line is hidden, the evolution of the code through benchmark-driven repair is ephemeral, and post-hoc auditing is impossible. We present a code generation concept that addresses these shortcomings through three complementary mechanisms: (i) a relational snippet-history schema that records, per repair event, the benchmark reference, round number, failure text, and LLM explanation, enabling full provenance queries; (ii) a browser-based visualisation tool that renders this history as heat-mapped, hover-annotated source code; and (iii) a competitive fractional position-key indexing scheme with tree-node delimiters that assigns stable, lexicographically-ordered identifiers to each code snippet, enabling fine-grained tracking without disrupting surrounding lines. We evaluate TraceCoder on 30 algorithmic programming tasks spanning string processing, mathematical computation, and data-structure manipulation, across two provider configurations. Of these, 10 exhaust the 6-iteration budget on tasks with subtle edge-case behaviour. Mean Chg% reaches 30%, three in ten code snippets carry a traceable repair-event row, compared to 21% when using Gemini 2.0 Flash as sole provider on a 20-task subset. Three detailed case studies demonstrate how the system explains which specific benchmark failures shaped each line of the final program. The proposed mechanism makes the internal "narrative" of automated code generation auditable and replayable, a property essential for trust and accountability in production deployments.

Automated code generation is becoming an important tool in quantitative finance, where large language models can generate option pricing implementations directly from mathematical model specifications. Validating such implementations, however, requires considerably more than conventional software testing: numerical pricing methods must remain mathematically consistent, numerically stable, and reliable across a wide range of model parameters. We introduce RIDGE, an autonomous validation framework in which generated pricing implementations are subjected to structured no-arbitrage tests, stress tests, benchmark comparisons, and consistency checks. Validation evidence is interpreted diagnostically, while the resulting knowledge is accumulated in a repository and reused across models and successive validation iterations. This enables systematic refinement of both the pricing implementation and the validation methodology. The framework is applied to five stochastic volatility models. Across these studies, all detected implementation defects are removed and, in two cases, the validation process reveals methodological limitations and motivates the development of alternative numerical methods. The supplementary material is available in the GitHub repository: https://github.com/ShQiangLiu/ridge.

Imperfections in AI-generated code require that software developers modify the generated code manually, or by re-prompting an AI programming assistant. Manual code edits provide more realistic and granular information on editing behavior than Git commits, which only contain final successful code snippets. Yet, due to a lack of high-quality, realistic code editing data, LLMs are mostly trained on publicly available Git data (e.g., commits). To address this gap, we introduce DECODE (Developer Edits of Code Dataset), a dataset of 53.6K real-world in-IDE code edits of AI-generated code in Python, TypeScript, and JavaScript, sourced from 1K+ developers. First, we demonstrate the utility of DECODE for data analysis, obtaining insights on when, why, and how AI-generated code is edited. We find that most edits occur within the first 15 minutes after accepting an AI completion, resulting in the removal of AI completions in 31% of edit trajectories. Second, we use DECODE to benchmark the ability of LLMs to predict code edits. We find that finetuning on DECODE enables open-source 3B models to perform code edit prediction tasks significantly better than frontier LLMs. We then discuss implications of this work, emphasizing the necessity of developer-centric machine learning approaches for future AI programming assistants.

Recent work has explored the use of Large Language Models (LLMs) to automate simulation model building, typically by generating executable code directly from natural language descriptions. However, this raises challenges for verification and reproducibility particularly for users without programming expertise. We propose Sketch2DES, a sketch-to-simulation workflow that converts diagrammatic representations of queuing networks into verifiable discrete-event simulation models using open-weight LLMs. The workflow has three stages: (1) translation of a diagram into a semi-structured textual description using a multimodal LLM; (2) conversion into schema-validated structured data (JSON) via an LLM with a reflection-based verification loop; and (3) deterministic transformation into an executable simulation model using a software adapter. Intermediate artefacts can therefore be inspected and automatically validated before execution. We evaluate the approach on eight queuing-network diagrams of varying complexity. The workflow achieved high reliability for all stages, and results were statistically indistinguishable from human-coded and analytical benchmarks. Compared to direct code generation, the workflow improves reproducibility, transparency, and verifiability, while reducing the need for programming expertise. Limitations include restricted model scope and dependence on accurate visual interpretation. The results demonstrate the feasibility of structured, workflow-based model generation as a robust foundation for LLM-assisted simulation modelling.

Repository-level code generation relies on heterogeneous evidence whose relevance, compatibility, and completeness are inherently uncertain. Similar-code examples, repository context, and project-specific APIs may provide complementary information, but can also introduce noisy, redundant, or conflicting signals. Existing retrieval-augmented approaches primarily optimize retrieval relevance without explicitly modeling how uncertainty in retrieved evidence affects downstream generation. We introduce OpenCoder, an uncertainty-aware framework that estimates source-specific uncertainty, uses it to filter and rank heterogeneous evidence, and guides generation, verification, and repair. A factorial analysis over API knowledge, repository context, and similar-code evidence reveals no universal additive source ranking; instead, significant cross-source interactions depend on the accompanying evidence and LLM backend. On an expanded 32-task RepoExec-inline evaluation, OpenCoder improves GPT selected-output correctness over Baseline RAG from 56.25% to 78.13%. However, it matches a verification-and-repair control, and the corresponding Gemini improvement is not statistically supported, indicating backend-dependent benefits. Target-aware API refinement also substantially improves API-set retrieval. These findings support treating uncertainty as an actionable control signal for repository-level retrieval, verification, and repair.

Low-thrust trajectory optimization is a core technology in deep-space mission design. Indirect methods based on Pontryagin's Minimum Principle (PMP) offer rigorous optimality guarantees, yet their practical application faces three bottlenecks: (1) transversality conditions must be derived case by case for each constraint type; (2) different dynamics models require repeated code rewrites; and (3) shooting equations are highly sensitive to initial guesses. This paper presents HELIOS (Heuristic Engine for Low-thrust Interplanetary Optimization System), a trajectory optimization agent built around a large language model (LLM). Given a physical problem described in natural language, the system autonomously performs PMP symbolic derivation, SymPy verification, C++ shooting-code generation, and numerical solution without human intervention. Key innovations include: (1) a constraint-adaptive derivation framework that unifies arbitrary constraints into psi(x,p)=0 form and automatically generates stationarity conditions for free parameters (e.g., gravity-assist turning angle); (2) dynamics-adaptive four-module code generation supporting non-standard dynamics (solar sail, J2 perturbation) without modifying the underlying template; and (3) a general derivation rule set covering critical error-prone points in PMP derivation. Experiments on 11 progressive test scenarios show that HELIOS correctly derives and solves problems from simple rendezvous (8 variables) to multi-leg stay transfers (48 variables), gravity-assist trajectories (17 variables), and solar-sail minimum-time transfers (8 variables). The best compilation success rate reaches 100% (11/11). A multi-model comparison (8 open-source LLM backends, total scores 250-905) verifies the model-agnostic architecture and reveals a positive correlation between model scale and derivation capability.

Creating a reusable tool is an investment: an agent pays a fixed cost now in exchange for the potential of future reuse. Therefore, a user should prefer an agent that creates a small number of highly reusable tools, rather than many one-offs. We introduce a paired benchmark that tests whether LLM agents exhibit conscious allocation behavior under a fixed budget in two contexts: an abstract text-based formulation and a code-construction task. We find that every frontier model we test---Claude Haiku, Claude Opus, GPT-5.4-mini, and GPT-5.6 Sol---acts near-optimally in the abstract framing but fails to transfer this ability to script-writing. Through further experiments, we identify the particular failure modes for each model. Notably, the first three models fail even when the scripts are not evaluated, while GPT-5.6 Sol stays selective under that weaker manipulation and collapses only at full construction. Furthermore, an open-source Qwen model policy-trained for abstract allocation generalizes this ability across held-out lexical variations, but sees no improvement at script allocation. Together, these results establish online tool allocation as a significant capability boundary, even for modern frontier models.

Large Language Models (LLMs) are widely used for code generation, yet their security behavior in realistic development workflows remains underexplored. Existing benchmarks often rely on explicitly specified security requirements, failing to capture real-world scenarios where prompts are frequently ambiguous or incomplete. In this paper, we adopt a developer-centric perspective and identify three representative risk scenarios that commonly lead to security vulnerabilities in LLM-generated code: Ambiguous Requirements, Under-Specified Operational Context, and Security--Functionality Conflict. Based on these scenarios, we construct a large-scale benchmark comprising 2,700 test cases, enabling fine-grained evaluation of LLM security under realistic conditions. Extensive evaluation of eight state-of-the-art LLMs reveals that all models exhibit average vulnerability rates exceeding 56% across risk scenarios. We further demonstrate that security-aware prompting can substantially mitigate these risks, achieving up to 45% improvement.

Large language models increasingly write both code and the tests meant to check it; coverage records what ran, not what was verified. We study an adversarial test-hardening loop under a mechanical oracle: a Tester model writes tests, mutation testing names surviving injected defects, and a Critic model writes tests to kill exactly those, with every verdict decided mechanically, so no model judges another's output. In Experiment 1, on five Python subjects (one same-lineage-loop cell could not be scored), the loop killed 105 mutants that one-shot generation missed and lost none, and the cross-lineage-Critic question returned a pre-declared null. The central finding was an autopsy: an earlier analysis reported a cross-lineage effect at p = 9.5e-66 that was an instrument artifact, an output cap silently truncating the verbose model, caught only by adversarial review of the completed analysis. Review then found a further confound, each arm resampling its own initial suite; Experiment 2 removes it. Under a pre-registered frozen-shared-round-0 design (five replicates on each of four subjects, seeds committed in advance), same-lineage Critic rounds killed 78% of the survivors the frozen initial suite left standing (mean incremental kill rate 0.783, 95% cluster-bootstrap interval [0.592, 0.935]), a within-replicate causal estimate; the cross-provider configuration showed a positive pilot difference (rate gap 0.178, 95% interval [0.039, 0.347]; magnitude dominated by a single replicate) at 5.5x lower arm cost. This compares two named model-provider-harness configurations, not an isolated lineage effect: part of the gap is one configuration's receipted operational failures, including truncation recurrences, now detected and scored rather than laundered. Cross-model comparisons can inherit the asymmetries of the harness that runs them. We release both protocols, all receipts, and the analysis code.

Large language models (LLMs) generate code from natural-language prompts, yet real-world prompts rarely provide complete specifications. When prompts leave input formats, error handling, or design decisions unspecified, LLMs fill these gaps with implicit assumptions that shape the generated code's behavior and correctness. Because these assumptions remain hidden, generated code may satisfy tests while violating developer intent. We present AssumptionMiner, a framework that makes implicit assumptions a first-class artifact of LLM-based code generation. In addition to code, AssumptionMiner produces an explicit assumption layer, a structured representation of inferred constraints and design decisions that developers can inspect, confirm, or revise. An AST-based dependency graph enables targeted regeneration of only the code affected by a revised assumption. We also introduce a benchmark of 180 ambiguous programming tasks with 676 annotated assumptions, including a human-verified subset for evaluating code localization. We evaluate assumption extraction, code localization, and assumption-guided regeneration. Across open-source LLMs, a confidence-weighted ensemble achieves an F1 score of 0.816 for assumption extraction, improving on the strongest offline baseline by 3.6x. On the human-verified localization benchmark, AST-guided localization identifies more precise code regions than keyword-based and whole-file baselines. During assumption revision, targeted regeneration modifies less code than non-targeted alternatives while exposing challenges in handling cascading edits. These results demonstrate that making assumptions explicit improves the transparency and controllability of LLM-based code generation.

Large Language Model (LLM)-based Test-Driven Development (TDD) has advanced automated code generation. However, existing approaches depend heavily on human-crafted test cases and cannot operate effectively when only natural-language requirements are available. Although recent work enables automatic test generation, it often overlooks the inherent stochasticity of LLMs, leading to two key defects: faulty tests generate misleading feedback that distorts code optimization, while mixed-quality test cases produce conflicting evaluation signals that hinder reliable code selection. To address these challenges, we propose MineValiCoder, a collaborative closed-loop TDD framework based on the mutual reinforcement of test-case quality and code quality. MineValiCoder comprises three modules. The Test Case Quality Mining (TCQM) module filters faulty test cases through self-validation, providing reliable optimization supervision. The Parallel TDD Refinement module iteratively optimizes code and generates diverse high-quality code candidates using validated test-case feedback. The Bipartite Graph-Based Code-Test Mutual Validation (BiCoTeV) module dynamically models code-test interactions and performs mutual validation scoring for stable and reliable optimal-code selection. Extensive evaluations across four LLMs and mainstream benchmarks show that MineValiCoder significantly outperforms state-of-the-art methods. Specifically, it achieves Pass@1 scores of 96.34% on HumanEval, 87.40% on MBPP, 64.00% on APPS, and 51.33% on LiveCodeBench. These results demonstrate the effectiveness of MineValiCoder in mitigating LLM stochasticity and improving the reliability of automated code generation.