Copilot

Comprendia is an Eclipse plugin that integrates structural dependency visualization with LLM-powered code explanation on a shared interactive graph for Java program comprehension. The tool rests on four pillars: (1) a multi-edge-type dependency graph with live search and multiple layouts; (2) LLM explanations grounded in Graph-Aware Callee Pruning (GACP), an auditable strategy that selects relevant callees using the same graph the developer navigates; (3) a clone-detection overlay that highlights duplication and suggests extract-to-parent refactoring opportunities; and (4) a CVE risk overlay powered by OSV.dev. GACP uses graph distance, inheritance collapse, and edge-type weighting to produce prompts that are reproducible across LLM families and traceable to visible graph nodes. We demonstrate Comprendia on a Java project containing known clones and vulnerabilities, showing how the unified graph substrate supports comprehension while keeping the developer in control. Screencast: https://youtu.be/1wlh_RYehzA

Early-stage molecular design is an iterative process, not just a task of generating molecules. Researchers turn broad goals into design strategies, refine candidates, assess many properties, and gather evidence before synthesis and tests. AI methods can generate molecules, optimize several goals, predict properties, dock compounds, and account for synthesis. Yet these functions are spread across specialized tools. Experts must still coordinate each step, judge interim results, and integrate evidence. The central challenge is thus to turn research intent into adaptive, traceable runs grounded in scientific tools. We cast this challenge as intent-to-evidence molecular design workflow execution and present CAi Copilot, an expert-oriented agent with three linked layers. The Research Interface Layer turns intent into an executable plan. The Agent Reasoning Layer uses interim results to guide each run. The Execution Substrate supplies molecular tools, metrics, reusable utilities, and backend services. Across 45 tasks, CAi achieves the strongest overall performance, with an outcome score of 84.59, exceeding the next-best result by 18.07 points. Additional benchmarks test how CAi coordinates generation, screening, and multi-criteria evaluation, while exposing limits in long-horizon execution. These results show that CAi turns broad molecular-design intent into transparent, traceable workflows that connect interim decisions to candidate-level evidence.

Long-horizon reasoning requires an agentic runtime that can persist when evidence supports its current approach and pivot when measurements reveal failure, hidden constraints, or a misspecified objective. We present Argus, a persistent, self-evolving runtime in which Manager, Planner, Engineer, and Reviewer execute bounded missions over durable project state. Argus separates stable user intent from operational objectives, constraints, and verification criteria, and admits memories, skills, procedures, verifiers, routing decisions, and rejected routes only after role-owned review and, when available, task-native verification. Model weights remain fixed; self-evolution occurs through persistent runtime state and control policy, with autonomous execution between operator-owned escalation points. Across seven GPT-5.5 benchmark arenas, Argus achieves about 78% on SWE-Bench Pro versus 59% for Direct Copilot while using 1.41 times the aggregate tokens. After verification-gated self-evolution, mature SWE-Bench waves use 21% fewer solve-input tokens and 15% less active workflow time per task than startup waves, while recording 34 verifier recoveries and 22 strict review-loop rescues. Argus also reaches 76.8% on AARRI-Bench and a 28.0-point gap on mathematical data synthesis, with competitive GPU-kernel and language-model-training results. Beyond benchmarks, an optimized RWKV6 kernel was merged upstream; a multi-day mathematics campaign retained falsified routes and proof-backed frontier updates; and six paper pipelines completed 254 missions with 16 stage rollbacks. These results show that a fixed-weight, self-evolving harness can revise, recover, and accumulate verified approaches while producing structured trajectories for future supervised and reinforcement learning.

AI coding agents like GitHub Copilot, Claude Code, and Codex interleave multi-step LLM inference with tool execution, creating a workload different from chatbots. We present the first production-scale characterization of this workload using sampled GitHub Copilot traces from June 2026, comprising 3.2M users, 13M sessions, 761M LLM calls, and 95T tokens. Our analysis reveals distinctive workload properties with important systems implications. For example, agentic coding sessions consist of sparse user-initiated turns, each unfolding into an autonomous agent loop of LLM calls almost always coupled with tool execution. This structure yields KV cache hit rates averaging 90% within a turn, but falling to 55% across turn boundaries and drastically invalidated after events like model switches or context compaction. Diverse workflows and user behaviors are observed with variable and long-tailed token consumption, time span, and tool calls. We highlight the difference between quick agentic turnaround times and the minutes-long user idle periods at turn boundaries, and design a lightweight idle-time predictor that captures 86-90% of total idle time, enabling proactive decisions for efficient resource orchestration. These findings challenge assumptions underlying current LLM-serving systems and provide an empirical foundation for agent-native infrastructure.

AI code assistants are transforming software development, but their implications for software security remain a major concern, particularly in the context of security APIs. These APIs are critical for safeguarding software systems, yet their complexity often leads to incorrect use and serious vulnerabilities. Developing an evidence-based understanding of how AI assistants influence developers' use of these APIs is therefore essential for informing effective mitigation strategies. While a few user studies have examined the broader impact of AI assistants on software vulnerabilities, the use of security APIs remains unexplored from a developer-centered perspective. This study addresses this gap by presenting the first empirical investigation into how AI code assistants affect professional developers' use of security APIs. We conducted a study with 44 developers who completed security API programming tasks with and without GitHub Copilot assistance. Our findings show that, while Copilot improves functional correctness and marginally reduces certain insecure patterns, it does not significantly improve secure API usage. We also found that developers rarely raised security concerns when engaging with Copilot, and many did not recognize that their final implementations remained insecure. Finally, we offer recommendations for enhancing security awareness among developers and propose future research directions to support safer AI-assisted software development.

As AI code tools become integrated into programming environments, students increasingly describe intended behavior in natural language and rely on these tools to generate code, shifting emphasis from code writing to specification. Yet little is known about the comments students write as specifications in AI-assisted programming tasks. We analyze a four-year dataset of undergraduate programming submissions and reflections from tasks in which students wrote comments to guide code generation and refined solutions using test-case feedback. We introduce a taxonomy spanning three dimensions: comment type, code expression level, and code construct. Using automated classification, we examine how these dimensions vary across attempts and how students describe the process in their reflections. Our findings show that students mostly wrote natural-language What comments, shifted toward How comments for more procedural constructs, and focused more on verifying generated code than on repeatedly rewriting comments.

Learning causal models from high-dimensional data is a significant challenge, particularly in real-world settings where violations of core assumptions lead to causal identifiability issues. Although massive amounts of prior knowledge are available, and contain valuable causal information, effectively integrating this knowledge into the causal discovery process remains an open problem. We introduce CausalSTeward (CAST), a novel human-in-the-loop framework for interactively assembling large causal models. CausalSteward is a multi-agent collaborative system that tackles high-dimensional causality through a divide-and-conquer approach where large clusters of variables are iteratively partitioned and then separately analyzed. Our framework fuses prior knowledge with a data-driven approach by using tailored tools such as retrieval augmented generation and conditional independence tests. Finally, we use this work to examine the capabilities and limitations of causal reasoning in multi-agent frameworks, and how the human-in-the-loop can contribute to accurate and trustworthy results.

Organizations rolling out agentic command line tools like Anthropic's Claude Code and GitHub's Copilot CLI need to know who will try them, who will keep using them, and whether the tools produce enough output to justify their cost. At organizational scale, token spend can run into millions of dollars annually, so misreading adoption, retention, or impact can make a rollout expensive without changing engineering velocity. Studying tens of thousands of engineers at Microsoft over its early-2026 rollout, we find that first use spread primarily through social networks, retention was associated more with engineers' coding activity than with demographics, and adopters merged roughly 24% more pull requests than they would have otherwise. We use merged pull requests as our proxy for output -- acknowledging that a merged PR is not the same as the value it delivers -- and the lift persists across our four-month window. These results suggest that CLI coding agents are neither uniformly adopted nor mere novelty effects and that organizations should treat visible peer use as central to rollout strategy.

Pooled across five AI coding agents, pull requests (PRs) with a human Co-Authored-By trailer merge less often than purely-autonomous ones (53.8% vs. 79.8%) -- yet this aggregate finding is a textbook Simpson's Paradox. Stratifying 33,596 PRs from the AIDev dataset by agent identity reverses the conclusion: Copilot and Devin show large positive within-agent gaps (+41.2 and +33.5 pp, both p<0.001), while Cursor, Claude Code, and Codex show small effects whose cross-sectional 95% CIs span zero. The paradox is driven entirely by agent composition: Codex, which dominates 64.9% of the dataset, achieves high merge rates while rarely using co-authorship. But Simpson's Paradox is only the first layer of a cascade of confounders: within-repo controls eliminate Devin's gap (+33.5 to +1.6 pp, p=0.73); a commit-count control further halves Copilot's within-repo gap (+36.2 to +24.4 pp); restricted to multi-commit PRs, the Copilot within-repo effect dissolves to +4.8 pp (p=0.59). No agent retains a clear co-authorship effect once both repository selection and PR structure are controlled. Our findings caution against reporting agent-pooled statistics without stratification and demonstrate that cross-sectional co-authorship associations are largely selection and PR-structure artefacts rather than evidence of a causal benefit.

Recent advances in both Large Language Models (LLMs) and Vision Language Models (VLMs) have seen a step change in their ability to perform visual code completion, but the aerospace industry, which prioritizes safety and explainabilty over rapid LLM adoption, currently has no publicly announced LLM-based geometric design copilot systems in commercial use by aerospace Original Equipment Manufacturers (OEMs). This paper presents a LLM-based visual programming copilot application for aerospace engineering design tasks, using a visual programming variant of the ReAct methodology and GPT 5.4. In addition to the copilot, we describe Wingbuilder, a new Grasshopper plugin library with custom components for aerospace-specific geometry abstraction, and an associated Aerospace Visual Programming Dataset (AVPD) with 18 aerospace expert designed tasks at different levels of difficulty alongside ground truth solutions. We evaluate our copilot application with a user trial involving two experienced aerospace engineers from a large aircraft manufacturing company. We find our copilot visual programming ReAct methodology was successful in generating suggestions that participants found helpful, but slow ReAct inference times limit its usefulness to more complex time-consuming tasks where waiting for good copilot solution suggestion was worthwhile. Participants reported they liked the tool and would be willing to use it in the future.

Although a growing body of research has begun to describe user--LLM interactions, the picture it paints is largely static; little is known about how individual users change their behavior over time. To address this gap, we analyze the conversational trajectories of ~12,000 randomly sampled Microsoft Bing Copilot users and compare these with data from WildChat-4.8M. While the Copilot data contains significant population-level trends, we find that trends in individual user trajectories are much weaker; user habits prove to be overwhelmingly sticky. We also find stark differences between users of different activity levels: more active users have more successful conversations and use the LLM for more complex and professionally oriented tasks. Some user trends also appear in WildChat-4.8M, but we find evidence that this dataset is significantly skewed towards highly proficient "power" users. Ultimately, our results suggest that existing user behavior is difficult to change and demonstrate the extent of user heterogeneity. Our comparison between datasets highlights that WildChat does not represent typical user--AI interactions, an important caveat for downstream uses of the data.

Causal analysis is a crucial task in many domains, including manufacturing, social science, and medicine. However, despite recent progress, the conceptual and methodological complexity of causal methods makes them largely inaccessible to domain experts. This gap prevents experts from leveraging these advances and hinders researchers who lack access to real-world data for validation. To bridge this divide, we introduce ORCA, a copilot for end-to-end causal analysis. ORCA orchestrates agents to understand the user's goals and guide them through the most appropriate causal analysis workflow, from fully automatic to highly user-guided execution. It features causal discovery, causal effect estimation, explainability and Root-Cause-Analysis (RCA). ORCA evaluates and compares performance, generates key metrics and diagrams, and generates insights through structured reports. We highlight its effectiveness across several real-world use-cases.

Reasoning capability has significantly advanced complex logical inference and robotic decision-making in general domains. However, its potential in the Artificial Intelligence (AI) copilot robot-particularly implemented based on the Vision-Language-Action (VLA) model-remains unexplored in endoscopic surgery. Effective reasoning should enable AI copilot robots to integrate multimodal cues, interpret surgical intent, and infer hidden tissue dynamics, thereby alleviating intraoperative uncertainty and cognitive burden on surgeons. Properly implemented, reasoning-driven autonomy can transform AI copilot robots from reactive executors into cognitive collaborators, enhancing precision, safety, and sustainability in clinical practice.

Defending against today's increasingly sophisticated cyberattacks requires security analysts to continuously translate evolving attacker tradecraft into detection logic. This places defenders in a reactive posture, requiring constantly updated expertise across an increasingly fragmented security landscape. We introduce the Dynamic Threat Detection Agent (DTDA), an always-on adaptive agent that continuously investigates security incidents across Microsoft Defender to uncover hidden threats and generate explainable detections when attack-story gaps are found. DTDA combines: (1) a unified activity timeline spanning alerts, events, user and entity behavior analytics, and threat intelligence; (2) versioned LLM prompt contracts with schema validation, grounding requirements, bounded retries, and fail-closed suppression; (3) a planner-executor investigation loop that generates attack-specific hypotheses and gathers supporting and refuting evidence; and (4) dynamic alert generation with a context-relevant title, severity, MITRE mappings, remediation guidance, implicated entities, and natural-language attack description. Integrated into Microsoft Security Copilot and deployed across tens of thousands of Defender customers, DTDA operates continuously at industry scale. In a 120-day online evaluation, DTDA achieves 80.1% precision from customer feedback while generating novel alerts for approximately 15% of investigated incidents. In offline evaluation, DTDA recovers hidden malicious activity with 0.78 F1 using GPT-5.4, improving over GPT-4.1 by 0.12 F1 and outperforming the baseline by 0.26 F1 points. Operationally, DTDA processes single-incident investigations end-to-end in a median of 28 minutes at a median token cost of USD 2.04, with a 0.38% job-level failure rate. These results demonstrate that autonomous agents can identify missed malicious activity at a production scale.

M365 Copilot is used every week by millions of people across more than a million companies around the world as part of their workflows. Uniquely positioned in the AI landscape given its near-exclusive use for work purposes, M365 Copilot can offer a clear picture of how people use AI for work and where that usage may expand next. This paper characterizes that usage through direct classification of user interactions with M365 Copilot Chat. Based on an anonymized and privacy-preserving analysis of a sample of approximately 5.5 million sessions, we combine a learned classification of user intent with a classification of O*NET work activities done with M365 Copilot Chat. We find that M365 Copilot is emerging as an everyday assistant for knowledge work: writing dominates, but users also rely on it for information retrieval, analysis, decision making and strategizing, and evaluating and diagnosing programs and systems, among others. Information seeking tasks remain common, but time trends suggest a relative shift away from ``chat as search'' and toward content and communication-related work. Comparisons across occupational groupings and to work done in the labor market further show that usage is broad but uneven, where the relative share of work done with M365 Copilot Chat cuts across jobs in some cases and is occupation-specific in others. Areas of relative underrepresentation in the labor market suggest the next frontier for enterprise AI adoption.

Large Language models (LLMs) show extraordinary abilities, but they are still prone to hallucinations, especially when we use them for generating Academic content. We have investigated four popular LLMs, ChatGPT, Grok, Gemini, and Copilot for hallucinations specifically for academic writing. We have designed 80 prompts across four categories, namely, reference generation, factual explanation, abstract generation, and writing improvement. We evaluated the model using a 0-5 rubric score, which checks factual accuracy, reference validity, coherence, style consistency, and academic tone. A novel weighted metric, Hallucination Index (HI), was introduced to measure hallucination in the responses generated by the models. Some of the most widely used evaluation metrics often fail to check errors which alter sentiment in machine-translated text. We found that Grok and Copilot perform better on reference generation tasks, but they often struggle with abstract or stylistic prompts, with HI values of 0.67 and 0.70, respectively. Whereas, Gemini and ChatGPT have done well with having stronger tone control, but they lack in writing factual tasks and higher hallucination risk with HI scores of 0.53 and 0.57, respectively. Our study found that hallucination behavior does not depend solely on model architecture but also on the type of task and the prompting conditions we are providing. We propose that our work opens new research dimensions for future researchers.

Modern searches for physics beyond the Standard Model produce rapidly expanding literature containing heterogeneous information, including textual analyses, numerical datasets, and graphical exclusion limits. Integrating these distributed sources remains a time-consuming and manual process for physicists. We present HEP-CoPilot, a retrieval-augmented multi-agent AI framework for the exploration and interpretation of high-energy physics literature. The system unifies textual information from publications, structured experimental data from HEPData, and reconstructed physics plots within a multimodal retrieval and reasoning architecture. By combining retrieval-augmented language models with coordinated agent workflows, it enables evidence-grounded reasoning over experimental analyses and structured interpretation of collider results. We evaluate the framework on recent CMS searches for physics beyond the Standard Model. Case studies show that HEP-CoPilot can retrieve relevant measurements, reconstruct exclusion limits directly from HEPData records, and perform cross-paper comparisons of experimental constraints. This enables consistent, physics-aware comparison across analyses without manual data integration. These results demonstrate that retrieval-augmented AI systems can function as scientific co-pilots for particle physics, facilitating navigation of complex literature, structuring heterogeneous evidence, and accelerating the interpretation pipeline for new physics searches.

We present a deployed system that automates end-to-end customer support workflows inside an enterprise Business Process Management (BPM) platform. The approach is scalable in production and reaches selective automation within two weeks for a new process, leveraging supervision already generated at scale: structured per-case UI interaction traces and low-overhead copilot feedback, where operators either accept a suggestion or provide a correction. A staged deployment pipeline trains a next UI action policy, learns a critic from copilot feedback to calibrate abstention, and executes only high-confidence steps in the background while deferring uncertain decisions to operators and resuming from the updated UI state. This setup lets one operator supervise multiple concurrent sessions and be interrupted only when the system is uncertain. The system operates on a schema-driven view of the BPM interface and includes monitoring and safe fallbacks for production. In production, it automated 45% of sessions and reduced average handling time by 39% without degrading support quality level.

Echocardiography interpretation requires integrating multi-view temporal evidence with quantitative measurements and guideline-grounded reasoning, yet existing foundation-model pipelines largely solve isolated subtasks and fail when tool outputs are noisy or values fall near clinical cutoffs. We propose Echo-CoPilot, an end-to-end agentic framework that combines a multi-perspective workflow with knowledge-graph-guided measurement selection. Echo-CoPilot runs three independent ReAct-style agents, structural, pathological, and quantitative, that invoke specialized echocardiography tools to extract parameters while querying EchoKG to determine which measurements are required for the clinical question and which should be avoided. A self-contrast language model then compares the evidence-grounded perspectives, generates a discrepancy checklist, and re-queries EchoKG to apply the appropriate guideline thresholds and resolve conflicts, reducing hallucinated measurement selection and borderline flip-flops. On MIMICEchoQA, Echo-CoPilot provides higher accuracy compared to SOTA baselines and, under a stochasticity stress test, achieves higher reliability through more consistent conclusions and fewer answer changes across repeated runs. Our code is publicly available at https://github.com/moeinheidari7829/Echo-CoPilot.

AI copilots represent a new generation of AI-powered systems designed to assist users, particularly knowledge workers and developers, in complex, context-rich tasks. As these systems become more embedded in daily workflows, personalization has emerged as a critical factor for improving usability, effectiveness, and user satisfaction. Central to this personalization is preference optimization: the system's ability to detect, interpret, and align with individual user preferences. While prior work in intelligent assistants and optimization algorithms is extensive, their intersection within AI copilots remains underexplored. This survey addresses that gap by examining how user preferences are operationalized in AI copilots. We investigate how preference signals are sourced, modeled across different interaction stages, and refined through feedback loops. Building on a comprehensive literature review, we define the concept of an AI copilot and introduce a taxonomy of preference optimization techniques across pre-, mid-, and post-interaction phases. Each technique is evaluated in terms of advantages, limitations, and design implications. By consolidating fragmented efforts across AI personalization, human-AI interaction, and language model adaptation, this work offers both a unified conceptual foundation and a practical design perspective for building user-aligned, persona-aware AI copilots that support end-to-end adaptability and deployment.

AI is rapidly advancing neuroscience, yet many laboratories fail to fully unleash its potential due to significant interdisciplinary barriers. While pre-trained neural models for physiological data are progressing quickly, their heterogeneous architectures and modality-specific constraints hinder systematic integration, selection, and evaluation. Despite recent advances in large language model (LLM)-based agent systems for intelligent scientific applications, existing approaches often still lack the domain expertise required to effectively select and coordinate diverse neuroscience pre-trained models and handle unique data types in this domain. We present NS-Copilot, an LLM-driven multi-agent system for neuroscience analysis that autonomously supports end-to-end workflows for diverse professional tasks. It unifies domain-specific pre-trained models and supports key neuroscience modalities, including EEG and extracellular spike data, through a natural-language interface. Given raw data and a task description, NS-Copilot orchestrates agents with specialized roles for planning, adaptive control, code generation, and result synthesis, enabling analysis without dataset-specific heuristics. We evaluate NS-Copilot on neuroscience benchmarks spanning Alzheimer's disease, Parkinson's disease, and working memory spike decoding. Across 8 trials per task, the system consistently outperforms strong baselines on the primary metric, demonstrating the ability of NS-Copilot for effective and scalable neuroscience analysis. Our code is publicly available at https://github.com/FrankLiu1102/ns-copilot.