Hybrid CNN-Transformer Architectures

The landscape of satellite imagery time series datasets and boundary-pushing architectures for cropland segmentation has never been richer. However, in this gold rush, important truths are being missed on both fronts, as a drive for the most novel concepts or the largest datasets pushes finer details to the side. In this paper, we present our hybrid transformer-convolutional model, Cropland Parallel Attention and Refinement Network for Segmentation (PAtteRNS), the first model to use self-attention mechanisms separately for each of the temporal, spectral, and spatial aspects of Sentinel-2 multispectral SITS data. To achieve fully-factorised attention in our proposed model, we introduce a novel parallel transformer architecture which significantly reduces the computational complexity of triple-factorised self-attention. We validate our architecture with an in-depth ablation study, and analyse the performance of our model against state-of-the-art crop segmentation models on multiple tile-size variants of the popular PASTIS and MTLCC datasets. Our findings show our model to outperform all others in the task of crop class segmentation, verified across multiple important segmentation metrics, with especially strong performance against compared models seen in the often under-reported parcel delineation quality, for which we use the Boundary IoU metric. We also find that flawed class groupings within datasets can have a significant negative impact on model performance, and report that alternate tile-size variants of crop segmentation datasets produce results incomparable to one-another, invalidating fair comparison between model performance when trained on different tile-sizes. Based on these findings, we suggest further work is required to standardise best practices when constructing SITS crop segmentation datasets, and to enable future dynamic-tile-sizing for ideal model performance.

Accurate brain tumor segmentation from Magnetic Resonance Imaging is essential for diagnosis, treatment planning, and surgical guidance. Although Convolutional Neural Networks, particularly UNet, have achieved significant success in medical image segmentation, they often struggle to capture the long-range spatial dependencies required to model tumors with irregular shapes and complex boundaries. This paper proposes a lightweight Vision Transformer UNet that combines the hierarchical feature extraction capability of UNet with the global context modeling of Vision Transformers. The proposed architecture incorporates a compact ViT bottleneck within a U-Net encoder-decoder framework, enabling effective learning of both local and global features while maintaining computational efficiency with only 2.6 million trainable parameters. The model was evaluated on the TCGA LGG MRI Segmentation dataset, achieving a mean Intersection over Union of 0.8100 and a Dice score of 0.8446, outperforming the baseline UNet by 3.75% and 3.15%, respectively. Extensive quantitative and qualitative analyses, including confusion matrix evaluation, precision recall curves, per-image performance distribution, and tumor size dependency analysis, demonstrate the effectiveness and robustness of the proposed method for brain tumor segmentation.

While Mamba-based models have shown strong potential for long sequence modeling, adapting them to vision is challenging due to the requirement of local neighborhood correlations and multi-directional spatial contexts for visual understanding. In this paper, we present LiAuto-MindViT, a novel hybrid vision backbone that synergizes the strengths of CNNs, Mamba, and Transformers. The core of our design is the Adaptive Bidirectional Mamba (ABM), which eliminates the directional bias of unidirectional SSMs through bidirectional selective scanning with learnable alpha blending, enabling content-adaptive directional fusion without the overhead of exhaustive multi-path routing. To further accelerate inference, we propose a deployment-friendly Reparameterized ConvSE (RepConvSE) module that leverages structural reparameterization to reduce latency and memory access overhead. Extensive experiments demonstrate that LiAuto-MindViT achieves state-of-the-art performance on image classification, object detection, and semantic segmentation while enabling efficient inference through reparameterization.

In this paper, we propose MECT, a speaker verification model that integrates the Mixture-of-Experts (MoE) mechanism into a CNN-Transformer backbone with optimized block structure and stacking scheme. Specifically, we investigated four MoE variants that span utterance-level and frame-level granularity with dense and sparse routing strategies. The MoE mechanism proves to be effective over the baseline without MoE with only a small increase in parameters. We further scale MECT to a series of model sizes, all maintaining compact parameters and low computational complexity. In particular, MECT-B2 achieves state-of-the-art performance on VoxCeleb1 and delivers strong results on CN-Celeb, demonstrating its effectiveness across diverse datasets. In addition, we establish a streaming inference paradigm through causal retraining, which maintains strong performance at a chunk size of 100ms.

Over the years, Convolutional Neural Networks (CNNs) have demonstrated strong capability in cancer detection and classification using medical images. However, CNN-based models often struggle to capture long-range contextual dependencies. In such scenarios, integrating Compact Convolutional Transformer (CCT) architectures after the CCT layer allows CNN-extracted features to reshape into compact patch tokens using a CCT tokenizer, followed by the addition of positional embeddings to preserve spatial structure. Using 5-fold cross-validation, the model was tested on 3 sets of breast cancer mammography. With only 250,435 parameters, the model achieved 99%-100% accuracy across 3 datasets, indicating robust generalization. Explainable AI (XAI) was integrated into the model to explain the breast cancer classification process to enhance clinical trust. The results indicate that the proposed framework is suitable for computer-aided diagnosis systems, particularly in resource-constrained clinical environments. The novelty of the proposed CNN-integrated CCT overcomes the limitation of CNN's gradient degradation in the last layers by integrating convolutional tokenization with transformer-based learning. Lighter than ViT, which is effective in capturing long-range dependencies, the model has also proven efficient in breast cancer classification by capturing long-range dependencies among breast tissue regions.

Schizophrenia is a serious psychiatric disorder that affects millions of people worldwide, and its diagnosis remains primarily dependent on clinical assessment. Electroencephalography (EEG) provides a non-invasive approach to investigate brain activity and has shown potential to support automated Schizophrenia detection. However, existing EEG-based classification studies often suffer from limitations including small datasets, inconsistent preprocessing strategies, and evaluation protocols that may not adequately prevent subject-related data leakage. In this study, we propose an EEG-based Schizophrenia classification framework that transforms preprocessed EEG recordings into time-frequency representations using the Short-Time Fourier Transform. The generated spectrogram images are classified using both conventional Machine Learning algorithms, including Support Vector Machines, Random Forests, and XGBoost, and Deep Learning models, including convolutional architectures and CNN-Transformer hybrids. To ensure reliable evaluation, all data partitions are performed at the subject level, and image-level predictions are aggregated into subject-level decisions. On the independent test set of 18 subjects, the CNN-Transformer (CT-SZ) model achieves a subject-level AUC-ROC of 95.00%, while the CNN + Squeeze-and-Excitation + Transformer (CST-SZ) model achieves 92.50%.

Onboard object detection in Earth observation is constrained by limited computational resources and the absence of fully corrected imagery. While convolutional detectors are hardware-efficient, they often struggle to extract robust representations from raw and noisy data. Conversely, transformer-based models provide stronger global reasoning capabilities but remain difficult to deploy on FPGA accelerators due to quadratic attention complexity and non-compatible operations. We introduce TriCCOT, a tri-part architecture for robust and deployable onboard object detection. TriCCOT combines a convolutional region proposal network, a conformal prediction stage, and Aper-GATES, our hardware-friendly attention-based classifier. The region proposal network generates candidate bounding boxes, which are subsequently enlarged via conformal prediction, providing a distribution-free probabilistic coverage guarantee. The resulting crops are processed by Aper-GATES, which reformulates self-attention through convolutional projections, global channel statistics, and hardware-friendly gating operations, avoiding standard transformer operations that are poorly suited to CNN-oriented accelerators. Experiments on the DIOR and VDVRaw datasets demonstrate competitive detection performance and improved robustness to spatial blur and signal-dependent noise when compared to FPGA-compatible architectures. Finally, we report full deployment on a Xilinx Versal VCK190 FPGA without modifying the underlying DPU architecture, enabling unified CNN-Transformer inference for spaceborne embedded applications.

Modern generative models, such as GANs, diffusion architectures, and autoregressive systems, now produce facial images that are nearly indistinguishable from authentic photographs. This capability makes detecting forged images increasingly difficult, raising serious concerns about identity theft, fraud, and misinformation campaigns. Our research focuses specifically on GAN-generated synthetic faces, which underpin many face-centric deepfakes, and investigates efficient detection approaches using image analysis alone. Existing detection systems rely heavily on either convolutional neural networks (CNNs) or global vision transformers. While CNNs excel at identifying texture-based local features, they struggle with broader contextual understanding. Traditional Vision Transformer (ViT) models can capture long-range structures effectively, but demand substantial computational resources. Our work explores Swin-Transformer-based architectures across three implementations: a compact Swin Transformer trained from the ground up, ImageNet-1K pre-trained Swin-Tiny and Swin-Small models adapted for binary classification, and a novel hybrid combining EfficientNet-B0's convolutional processing with a Swin Transformer backend. We evaluated all models using the 140K Real and Fake Faces dataset, which includes StyleGAN-generated fake faces alongside authentic images from Flickr and DFDC, with balanced splits for training, validation, and testing. The EfficientNetB0+Swin hybrid achieved 99% accuracy and a 99.44% recall on 5,000 test images, outperforming both pure Swin variants and a previous CNN-only baseline on this dataset. Our results suggest that combining hierarchical CNN features with shifted-window self-attention provides an efficient and computationally lightweight method for detecting GAN-generated synthetic faces.

Convolutional neural networks (CNNs), used widely and successfully in audio enhancement, capture long-range time-frequency dependencies only indirectly, through successive convolution and pooling. Here, we present U-PAST, a hybrid transformer-U-Net architecture that addresses this limitation through self-attention dependency-modeling in the complex spectrogram domain. U-PAST tokenizes a complex STFT representation, similarly to the magnitude spectrogram tokenization of the Audio Spectrogram Transformer (AST), applies a multi-layer transformer encoder, and reconstructs the enhanced complex spectrogram with a U-Net-style decoder. We evaluate four architectural variants with between 1.17M and 2.40M parameters on the DNS Challenge, VoiceBank-DEMAND, and LibriMix corpora under matched, acoustic mismatch, and two-dataset mismatch conditions. U-PAST attains the best SI-SDR of any evaluated model under acoustic mismatch and closely trails substantially larger convolutional and time-domain baselines by 0.26 dB to 0.63 dB SI-SDR under the remaining three conditions while achieving the strongest perceptual (DNSMOS) quality under dataset mismatch. The largest evaluated configuration, U-PAST-H (2.40M parameters), is consistently the strongest variant of the family, offering an attractive performance-to-cost trade-off at a small parameter footprint.

Antarctic sea ice concentration (SIC) forecasting is an important yet challenging task due to the coexistence of complex spatial structure, long-range temporal dependencies, and strong seasonal variability. Conventional convolution-based models are effective at capturing local spatial patterns, but often have limited ability to model long-term temporal evolution. To address these challenges, we build on a hybrid convolutional transformer forecasting framework for monthly Antarctic SIC forecasting. This framework combines convolutional encoding for spatial feature extraction with space-time factorised self-attention for SIC modelling. We further introduce two season-based mechanisms: a month-aware positional encoding that injects calendar-month information into the token representation, and a seasonal temporal bias that encourages attention to periodically related historical states. Experimental results show that the proposed framework achieves better performance than convolutional and recurrent baselines as well as ECMWF's physics-based dynamical model SEAS5 under both classification and regression metrics. Ablation studies further indicate that the seasonality-aware components provide consistent additional gains in both short- and long-horizon prediction. These results demonstrate the value of combining convolutional structures, attention mechanisms, and periodic prior information for Antarctic SIC forecasting.

Accurate bladder tumor segmentation and assessment of mus- cle invasion from T2-weighted MRI are important for treatment plan- ning, but developing robust models across institutions is challenging be- cause patient data cannot be centrally pooled and imaging characteristics vary across scanners and acquisition protocols. We propose a federated multi-task learning framework for joint bladder tumor segmentation and MIBC/NMIBC classification across four clinical centers. The proposed Swin Hybrid model combines a ResNet-34 branch for local texture and boundary information with a Swin-Tiny Transformer for global anatomi- cal context. A segmentation-guided classification mechanism further uses tumor localization information to support MIBC prediction. We also investigate several augmentation strategies under both centralized and federated training to improve robustness to multi-center variability. Ex- periments on the FedBCa dataset show that the Swin Hybrid provides the best overall balance between segmentation and classification among the evaluated architectures. Under federated training, Geo+Elastic aug- mentation achieved a DSC of 0.8100 and a patient-level AUC of 0.8931, yielding the highest combined score of 0.8474. These results demonstrate that joint segmentation and classification can be effectively performed across multiple institutions using federated training without centralizing patient data.

Convolutional Neural Networks (CNNs) capture local features efficiently but struggle with global context due to their limited receptive field. On the other hand, transformers effectively capture global dependencies through self-attention but suffer from high redundancy and computational costs. Thus, to leverage the advantages of both CNNs and transformers, we propose a unified model (UniCon-Former) that aims to provide robust and efficient performance on dynamic hand gesture recognition. The unified approach helps the model to learn both local and global features. At the beginning of each transformer stage, the convolution projections help in decreasing the dimension of the input vectors of the transformer block. This creates a pyramidal structure at each transformer stage. These features enable the UniCon-Former to reduce resource usage than vanilla transformers, making it flexible for learning multi-scale and high-resolution features, which is required in hand gesture recognition. We have performed experiments with NVGesture and Briareo datasets and achieved state-of-the-art results with fewer parameters and MACs.

Accurate vessel trajectory prediction is critical for maritime safety and anomaly detection, yet existing models often struggle with geographic bias and navigational realism. We propose the Continuous Regression Hybrid Transformer (CRHT), a deep learning framework designed to forecast vessel motion using Automatic Identification System (AIS) data. To mitigate spatial data imbalance, we introduce an online K-means cluster sampling strategy that ensures diverse exposure to rare maneuvers during training. Our hybrid architecture integrates 1D convolutional layers for local kinematic feature extraction with a multi-head attention mechanism for global temporal context. CRHT demonstrates superior performance in short-term forecasting, achieving the lowest errors at the 1-hour horizon. The results demonstrate that while discrete models provide high navigational stability over long horizons, CRHT offers an optimal balance of precision and maneuver tracking for real-time maritime surveillance.

Automatic sleep staging is a critical role in sleep disorder diagnosis, sleep quality assessment, and long-term health monitoring; however, existing approaches suffer poor performance on ambiguous and transition-related sleep stages, caused by inadequate modeling of fine-grained intra-epoch structures and complex cross-region spectral dependencies. Traditional epoch-level encoders commonly fail to extract subtle temporal microstructures and intra-epoch cross-region interactions, resulting in unsatisfactory recognition accuracy for hard categories such as the N1 stage. To tackle these drawbacks, we propose SwinSleepNet, a hierarchical context-aware dual-stream framework that separately optimizes intra-epoch representation learning and inter-epoch contextual modeling. Concretely, we characterize each sleep epoch from two complementary perspectives: raw time-domain EEG signal and its time-frequency transformation. The time-domain branch adopts convolutional encoders to capture fine waveform temporal details, and the time-frequency branch uses Swin Transformer to extract local spectro-temporal features, hierarchical multi-scale information and long-range spatial dependencies. The multi-branch extracted features are fused into integrated embeddings, which are optimized by a bidirectional context module to capture cross-epoch temporal dependencies for final sleep stage classification. Comprehensive experiments on Sleep-EDF-20, Sleep-EDF-78 and SHHS datasets verify that our method achieves competitive overall performance, and exhibits stronger robustness and stability on difficult N1 stages and transitional epochs. The results prove that optimized intra-epoch representation learning based on hierarchical architecture greatly benefits automatic sleep staging tasks.

In this paper, we propose the MAEConformer, a novel self-supervised learning framework that combines the Conformer architecture with the Masked Autoencoder (MAE) paradigm for large-scale representation learning from unlabelled electroencephalography (EEG) and heart rate variability (HRV) signals. By integrating convolutional operations with Transformer-based self-attention, MAEConformer effectively captures both local temporal patterns and long-range contextual dependencies in physiological time series. To enhance reconstruction fidelity and representation quality, a multi-resolution short-time Fourier transform (MR-STFT) loss is incorporated alongside the reconstruction objective, enabling the model to jointly learn temporal and spectral characteristics across multiple scales. Modality-specific EEG and HRV MAEConformer models were pretrained on 6,030h and 4,868h of unlabelled recordings, respectively, and subsequently transferred to expert-annotated downstream tasks. Experimental results demonstrate that the learned representations provide strong transferability and data efficiency. In EEG-based hypoxic ischemic encephalopathy (HIE) severity classification, the pretrained MAE-EEG model achieved test AUCs of 97.19% and 96.56% for binary and four-class classification tasks, respectively, outperforming a range of state-of-the-art supervised and self-supervised baselines. On the HRV-based HIE severity classification task, MAE-HRV achieved a test AUC of 82.42%, surpassing both self-supervised Transformer-based and supervised convolutional baselines. These findings demonstrate the effectiveness of MAEConformer for learning robust and transferable representations across multiple physiological modalities.

Hand gesture recognition via surface electromyography (sEMG) is fundamental to prosthetic control. In this field, deep learning approaches have become the gold standard. However, current architectures struggle to scale; model performance typically decreases as the number of hand movements increases. Performance degradation is tied to the increased statistical complexity of decoding expanded gesture sets and compounded by the limitations of state-of-the-art methods, which primarily rely on low-latency unimodal convolutional architectures. Convolutions operate locally, limiting model's ability to capture long-range sequential patterns. Unimodal setups cannot leverage complementary information from coordinated signals characterizing movement execution, such as inertial and eye-tracking data. These limitations motivate architectures that integrate local and global features across multimodal physiological sequences. To bridge this gap, this study introduces EMG-CrossFormer, an end-to-end hybrid convolutional-transformer for seamless multimodal integration. EMG-CrossFormer combines representations from an arbitrary number of unimodal encoders through cascaded cross-attention fusion layers, and decodes the fused representations using learnable gesture queries. EMG-CrossFormer was evaluated on four NinaPro datasets (DB2, DB3, DB7, and DB10) and benchmarked against six state-of-the-art models using an increasing number of modalities. Using only sEMG, EMG-CrossFormer achieved mean accuracies of 72.33%, 52.48%, 79.16%, and 73.49% on DB2, DB3, DB7, and DB10, respectively. Incorporating inertial signals improved performance to 90.66%, 80.40%, 92.79%, and 92.06%. These results show that joint local-global feature modeling improves sEMG-only decoding and that multimodal fusion substantially amplifies this benefit, underscoring the value of both design principles for complex hand gesture recognition.

Multi-branch architectures and CNN-Transformer fusion are widely believed to improve vehicle re-identification (Re-ID) by combining complementary representations. We revisit this for a DINOv3-pretrained backbone. A single DINOv3-pretrained ConvNeXt with a tuned recipe reaches 88.19 mAP on VeRi-Wild Small and 77.47 on Large from visual cues alone, within the combined evaluation and optimization noise of the strongest protocol-verified metadata-dependent multi-branch baseline, and 92.38/83.68 with training-free re-ranking. Using this baseline and retrieval-level branch diagnostics, we ask whether representational diversity still pays at this scale. In our runs, it does not. Across both benchmarks and every converged configuration, concatenating multiple heads over a shared backbone moves the best single head by under one mAP point in either direction while costing four times the embedding dimension; 99.7% of the concatenation's variance lies in 512 principal components, so the heads not only duplicate one another but each occupies a quarter of its nominal 2048 dimensions. Pushing diversity to its architectural limit, CNN versus Transformer, we grant fusion every advantage through an asymmetric frozen-anchor scheme. Every Transformer configuration still lands at least 13 mAP below the ConvNeXt backbone (13-15 for the two strongest, up to 46 for the weakest), and a paired per-query bootstrap bounds the fusion gain at +0.11 mAP (95% CI) even for the most favourable snapshot we obtained. One strong backbone with the right recipe and re-ranking is the efficiency frontier. All results use single-seed training and one foundation-model family; differences of this size are therefore reported as bounds rather than orderings, and we list falsifiers.

Transformers with global attention capture long-range dependencies but can miss the fine-grained local continuity crucial for speech separation. We propose TF-MossFormer, a time-frequency transformer that combines local and global attention to jointly model short- and long-range contexts for monaural speech separation. At its core is a content-aware sliding-window attention mechanism that dynamically adapts receptive fields for stronger local interactions, avoiding the rigidity of static convolutions. Unlike time-domain chunk-based methods, TF-MossFormer leverages the 2D spectrogram to model structure along both time and frequency axes. Convolutional gating between attention layers further improves feature selection and information flow. TF-MossFormer achieves SI-SDRi of 22.6, 24.0, and 24.4 dB on WSJ0-2Mix with 5.9M, 16.9M, and 25.4M parameters, respectively, outperforming prior approaches.

Attention Mechanism (AM) selectively focuses on essential information for imaging tasks and captures relationships between distant pixel neighborhoods to compute feature representations. Accelerated MRI reconstruction benefits from AM, as the imaging process involves Fourier domain measurements that influence image representation non-locally. However, AM-based models are more adept at capturing low-frequency information with limited capacity for high-frequency representations, restricting models to smooth reconstruction. Additionally, AM-based models need mode-specific retraining for multimodal MRI data, as their knowledge is restricted to local contextual variations that may be inadequate to capture transferable features across heterogeneous domains. To address these challenges, we propose a neuromodulation-based discriminative multi-spectral AM for scalable MRI reconstruction that can (i) propagate context-aware high-frequency details for high-quality reconstruction, and (ii) capture features reusable across deviated unseen domains in multimodal MRI. The proposed network consists of a spectral filtering CNN to capture mode-specific transferable features and a dynamic high-pass kernel generation transformer focusing on high-frequency details. We evaluate our model on comparative studies in supervised and self-supervised learning, diffusion model-based training, closed-set and open-set generalization under heterogeneous MRI data, and interpretation-based analysis. Our method offers scalable, high-quality reconstruction with best improvement margins of ~1 dB in PSNR and ~0.01 in SSIM under unseen scenarios. Code: https://github.com/sriprabhar/SHFormer

Hyperspectral image (HSI) classification systems are increasingly deployed on platforms with strict computational budgets, such as UAVs and small spaceborne sensors. In these settings, accuracy alone is not enough; the model must also run within tight latency and memory constraints. Most recent HSI classifiers, however, focus on accuracy and pay relatively little attention to these constraints. We propose BCG-Former, a lightweight CNN-Transformer hybrid that targets this trade-off. The model introduces three innovations: (1) Band-Contextual Gating (BCG) for adaptive spectral recalibration using local inter-band context and learnable temperature sharpening, (2) a spectral summary token that bridges spectral and spatial features, and (3) single-pass Band-RoPE combined with linear attention for efficient joint representation learning. Evaluated on classical airborne (Pavia University, Salinas, Indian Pines, Houston 2013/2018) and UAV-borne benchmark datasets (WHU-Hi-LongKou, HongHu, and HanChuan), BCG-Former achieves over-all accuracy ranging from 91.51% on Houston 2018 to 99.49% on Houston 2013, while maintaining sub-millisecond inference latency (0.91-0.95ms) and using only 0.10-0.23M parameters. Across all eight benchmarks, BCG-Former consistently resides on or near the Pareto frontier of accuracy versus latency, outperforming or matching recent CNN-, Transformer-, and Mamba-based methods at a fraction of their computational cost. Ablation studies confirm that all three components are complementary, with BCG providing the largest individual contribution. These results establish BCG-Former as a strong accuracy-efficiency Pareto candidate for real-time and large-scale remote sensing applications.

Deploying deep learning models for automated electrocardiogram classification on resource-constrained wearable devices remains challenging due to high computational costs. To address this, we propose LSTrans, a lightweight hybrid model designed for efficient and sensitive ECG analysis. LSTrans introduces a specialized 1D convolutional backbone with an interleaved layer architecture to capture both macroscopic rhythmic trends and microscopic morphological variations. This backbone is cascaded with a Transformer encoder to model long-range temporal dependencies, incorporating Low-Rank Adaptation across critical layers to compress the model and reduce the trainable parameter space. We further employ homogeneous and heterogeneous knowledge distillation to transfer diagnostic expertise from high-capacity teacher models to the student. Experimental results on multiple benchmark datasets demonstrate that LSTrans achieves a competitive balance between diagnostic sensitivity and resource efficiency, substantially reducing peak memory footprints and training latency during downstream adaptation. The source code is available for review at https://github.com/zyee00128/LSTrans4BIBM.

Self-supervised pretrained foundation models (FM) have shown early promise for non-invasive electroencephalogram (EEG) decoding applications. Many recent large-scale models converged on the approach of tokenizing raw EEG followed by masked reconstruction pretraining. However, this recipe has been shown to be suboptimal for data, like EEG, with high noise amplitude and information confined to limited dimensions such as narrow frequency bands. Building on this insight, we develop a novel contrastive-pretrained EEG model with multiscale temporal convolution input layers and Transformer encoder blocks (CoCoT). CoCoT matches or beats state-of-the-art reconstruction-pretrained EEG models on extensive benchmark decoding tasks with heterogeneous electrode configurations. Furthermore, CoCoT trained from scratch outperforms previous single-task decoding models and even rivals pretrained models, showcasing the architecture's flexibility and data efficiency. Through systematic ablations, including model architecture and pretraining objective, we demonstrate the viability of contrastive learning for building EEG FMs while suggesting key architectural design considerations, prompting further investigations in alternative large-scale pretraining strategies.

X-ray fluorescence (XRF) spectroscopy is a key modality for material analysis in cultural heritage. However, automated learning from XRF spectra remains challenging: XRF spectra are complex one-dimensional signals composed of sharp elemental peaks, broader structures, and background variations that are not taken into account by existing learning-based models. This paper introduces XRFormer, a transformer architecture tailored to XRF spectra through a multiscale convolutional tokenizer that injects locality and multi-resolution inductive biases before global self-attention. The tokenizer progressively reduces spectral resolution while increasing embedding dimensionality, and the resulting token sequence is processed by a standard transformer encoder. We further investigate self-supervised pretraining for XRF representation learning using Masked Spectral modeling (MSM) and a physics-informed Peak Presence Prediction (PPP) objective. Experiments on the Pigments Checker STANDARD v.5 dataset for pigment identification and unmixing show that XRFormer consistently outperforms ViT, SpectralFormer (with and without CAF), and a 1D-CNN baseline for pigment identification. For pigment unmixing, XRFormer achieves robust abundance estimation while maintaining significantly higher parameter efficiency than SpectralFormer, operating at a lower token resolution (128 vs. 512 tokens) and with less than half the number of parameters (1.5M vs. 3.37M). MSM yields consistent gains across both tasks, while PPP further enhances performance for both identification and unmixing when tuned with an appropriate peak prominence. These results highlight multiscale, modality-aware tokenization as an effective and parameter efficient foundation for transformer-based XRF modeling under data-limited conditions. A GitHub repository is provided at https://github.com/sofiane1010/XRFormer.

Traditional malware detection methods struggle to generalize to obfuscated or previously unseen threats. This paper introduces ThreatVisionAI, a hybrid malware family classification framework that integrates a raw-image CNN, a wavelet-based CNN, and a Vision Transformer (ViT) to capture complementary spatial, frequency-domain, and global relational features in malware images. The wavelet-based CNN captures multi-scale frequency information that helps distinguish closely related families, while the ViT branch models long-range dependencies across the image. Evaluated on the Malimg dataset, ThreatVisionAI achieves 98.01% accuracy and a weighted F1 score of 0.9742, with wavelet-domain features providing measurable gains on minority and visually similar families. These results confirm that frequency-aware and transformer-based representations improve image-based malware family classification.

Deploying Vision Transformer (ViT) models on edge platforms remains challenging due to their high computational demands and the architectural heterogeneity of modern hybrid ViT models, which incorporate both fully connected and convolutional layers. This heterogeneity leads to significant variation in tensor shapes, requiring flexible and efficient FPGA-based acceleration. In this paper, we present FlexViT, a reconfigurable FPGA accelerator for efficient ViT inference on resource-constrained edge devices. Built on the SECDA-TFLite framework, FlexViT employs a hardware-software co-design approach that maps both fully connected and convolutional layers onto a unified high-throughput INT8 GEMM engine using a runtime im2col transformation. To efficiently support diverse layer configurations, we propose a dual-mode dataflow that dynamically switches between input and weight reuse by reconfiguring the compute array at runtime. We further introduce a depth-first tiling strategy that completes accumulation in a single pass, eliminating off-chip partial-sum transfers and reducing memory bandwidth requirements. We implement FlexViT on a PYNQ-Z2 FPGA and evaluate it across a representative set of ViT models. FlexViT achieves up to 2.74x speedup on accelerator-executed layers, translating into up to 1.40x end-to-end speedup compared to CPU-only execution. The code is available at: https://github.com/gicLAB/FlexViT

Accurate prediction of stress and strain fields in hierarchical composite microstructures is critical for physics-informed material design, yet conventional finite element method (FEM) simulations are computationally prohibitive at scale, requiring minutes to days per evaluation. In this work, we propose a hybrid UNet-Transformer architecture that predicts complex mechanical field distributions directly from composite microstructure geometry images, serving as an efficient surrogate for FEM across ten distinct stress and strain field types spanning diverse two-phase composite configurations including square, hexagonal, and triangular tessellations, multiple boundary conditions, and high-resolution geometries. Results demonstrate that the proposed architecture achieves strong predictive performance across the majority of subdatasets, with peak accuracy on periodic tessellation geometries reaching R2=0.9991, SSIM=0.9936, and MAE=0.0050 on the boundary condition subdataset and the triangular tessellation subdataset respectively. Across six of the eight evaluated subdatasets, MAE remains below 0.05 on the normalized [0,1] pixel scale. Encoder attention analysis via Grad-CAM and Grad-CAM++ confirms that the model develops physically meaningful internal representations, localizing attention at mechanically critical regions including phase boundaries, ligament junctions, and indenter contact zones without explicit structural supervision. Performance degrades on irregular square-grid geometries with sparse soft-phase inclusions, with the S11 normal stress subdataset yielding R2=0.7735 and SSIM=0.7126, consistent with the known limitation of smooth-loss image translation models in reproducing sharp stress discontinuities.

Accurate coronary Digital Subtraction Angiography (DSA) vessel segmentation is essential for computer-aided diagnosis and treatment planning of coronary artery disease (CAD). However, thin low-contrast vessels, background interference, and severe vessel-background class imbalance make reliable segmentation of weak distal branches and vessel boundaries challenging. Existing methods struggle to balance global contextual reasoning with preservation of weak vessels, vessel continuity, and fine boundaries. To address these limitations, we propose HTC-SGA Former, a lightweight hybrid Transformer-CNN framework for coronary DSA vessel segmentation. It employs a CNN encoder for local vessel morphology extraction and a Transformer decoder for contextual feature modeling. A Multi-Scale Global-Local Window Attention (MS-GLWA) block performs efficient global-local contextual modeling, while a Self-Guided Feature Attention (SGFA) module enhances weak-vessel responses. In addition, a Boundary-Weighted Adaptive Compound Loss (BWACL) emphasizes thin-vessel boundaries and adaptively balances vessel recovery and boundary refinement. Experiments on private right and left coronary artery DSA subsets show that HTC-SGA Former outperforms 14 state-of-the-art segmentation methods while maintaining a compact architecture with only 0.81M parameters. BWACL also improves performance over binary cross-entropy and Dice losses across four encoder-decoder architectures, demonstrating strong cross-backbone applicability. HTC-SGA Former improves thin-vessel recovery, vessel continuity, and boundary localization through complementary global-local contextual modeling, vessel-focused refinement, and adaptive optimization, supporting reliable and computationally efficient coronary vessel analysis for future computer-assisted cardiovascular interventions.

Deep learning has become an important tool in computational pathology, enabling automated analysis of histopathological images. While convolutional neural networks (CNNs) have traditionally dominated this field, transformer-based and hybrid architectures have recently demonstrated promising performance. However, comprehensive comparisons of these approaches for colorectal histopathology remain limited. This study evaluated twelve ImageNet-pretrained CNN, transformer, and hybrid architectures using the Kather colorectal histopathology dataset containing 5,000 image tiles from eight tissue classes. All models were trained using a standardized transfer-learning and fine-tuning protocol and assessed using multiple performance metrics, including accuracy, precision, sensitivity, specificity, F1-score, ROC-AUC, Cohen's kappa, and Matthews correlation coefficient. All evaluated models achieved high classification performance, with accuracies ranging from 93.2% to 97.1%. EVA-02 achieved the highest overall performance (97.1% accuracy, 97.0% F1-score), closely followed by ViT-B/16. Among CNNs, ResNet34 and ConvNeXt-Tiny demonstrated highly competitive performance, achieving accuracies of 96.4% and 96.3%, respectively. Transformer architectures generally produced the strongest results across evaluation metrics, although the performance gap between the best transformer and CNN models was relatively small. Per-class analysis showed consistently strong classification performance across all tissue categories, with Complex Stroma representing the most challenging class. Overall, transformer-based architectures achieved the highest predictive performance, whereas modern CNNs provided a favorable balance between accuracy and model complexity. These findings provide a comprehensive benchmark of major deep learning paradigms for colorectal histopathology classification.

Medical image segmentation plays an important role in computer aided diagnosis, treatment planning, and disease monitoring. U-Net has been widely used for biomedical image segmentation because of its encoder decoder structure and skip connections. However, conventional convolution based U-Net models may have limited ability to capture long range dependencies and global contextual information, which can affect performance in complex segmentation tasks. This paper presents a comparative study of five U-Net based architectures: U-Net 3D, Residual U-Net, Attention U-Net, UNETR, and Swin UNETR. The models are evaluated on two benchmark datasets: BraTS 2023 for brain tumor segmentation and DRIVE for retinal vessel segmentation. Experimental results show that Swin UNETR achieves the best overall performance, with Dice scores of 0.8965 on BraTS 2023 and 0.8078 on DRIVE. The results suggest that transformer based U-Net variants are effective for segmentation tasks requiring global contextual modeling, while residual learning remains useful for fine structure segmentation. This study provides practical insights into model selection for medical image segmentation across volumetric MRI and retinal imaging tasks.

Accurate segmentation of thin, tortuous anatomical structures, such as retinal vessels, cerebral vasculature, and facial wrinkles, remains challenging due to low contrast, frequent discontinuities, and severe class imbalance. Although recent convolutional and Transformer-based models have improved performance, they often yield fragmented predictions and fail to recover fine branches. We propose CSWinUNETR, a general-purpose backbone for 2D and 3D thin-structure segmentation. It employs cross-shaped stripe self-attention to model long-range principal-axis context and incorporates cyclic shifts to enhance information exchange across stripes. To better preserve fine-grained details, we further introduce a detail-enhanced multi-scale self-attention module that aggregates contextual features from multi-resolution representations. In addition, we propose sparse-control dynamic snake convolution, which reconstructs reliable dense curvilinear kernels from sparsely predicted control points to better follow tortuous geometry. Extensive experiments on four benchmarks across ophthalmology, neurovascular imaging, and dermatology demonstrate that CSWinUNETR consistently outperforms state-of-the-art methods without task-specific post-processing or topology-aware losses. The code is available at https://github.com/labhai/CSWinUNETR.