Generative Pretrained Transformers

Safety evaluations for large language models rely on surface-form classifiers that report declining harm scores across model generations. We provide evidence that this methodology is systematically incomplete: explicit discriminatory content is transformed rather than removed. We call this \emph{harm laundering}. Analysing 450,000 gender-directed completions across 15 models spanning GPT-2 through to GPT-5 (OpenAI GPT lineage; three demographic conditions), we show that sexual violence clusters prevalent in GPT-2 women-directed output disappear by GPT-4, while men-directed completions gain positive representational territory (caregiving, emotional range, ally identity) that women-directed completions do not. The pattern is most visible at GPT-5: Topic5 (1,997documents) frames breast cancer as a men's rights debate, while zero equivalent clusters appear in women-directed output. Three independent classifiers score this content as non-toxic. Sentiment scores invert at GPT-4: early models demean women; later models over-correct. Topic diversity in women-directed completions falls 36% relative to men at the GPT-4 alignment boundary (W/M~$= 0.58$, from $0.91$ at GPT-2). REGARD representational harm disparity correlates with release date ($ρ= +0.55$, $p = .034$) while Detoxify does not ($ρ= -0.23$, $p = .42$): toxicity scores fall as representational harm grows. We formalise harm laundering as a three-criteria test and provide a three-stage detection protocol applicable to any generative model. Within the OpenAI GPT lineage, toxicity score reduction is not a sufficient proxy for harm reduction.

Counterfactual analysis aims to predict potential outcomes under hypothetical scenarios, offering valuable insights for decision-making. This paper investigates the application of large language models (LLMs), specifically the GPT-3.5 model, for counterfactual analysis. We focus on the online lending context, where the counterfactual return on investment (ROI) is crucial for evaluating different interest rate schemes. We begin by assessing the predictive performance of GPT and comparing it with advanced machine learning algorithms. The results show that prompt engineering can significantly enhance GPT's predictions, with the R-squared increasing from 1.97% to 2.84%, closely approaching the 3.48% achieved by gradient-boosted regression. Subsequently, we utilize GPT to generate counterfactual ROIs under a set of alternative interest rates. GPT exhibits logical coherence and causal reasoning in its responses. The findings underscore the potential of LLMs as effective tools for counterfactual analysis in online lending, suggesting broader applications for LLMs in various predictive and decision-making contexts.

Effective long-context modeling is not merely about retaining more of the past, but about preserving the information that may prove relevant later. Test-time training (TTT) is an appealing approach that performs online parameter updates for long-context modeling, yet existing TTT methods only optimize either reconstruction or online adaptation objectives without considering the future utility of retained information. In this work, we propose \textbf{T}est-\textbf{T}ime \textbf{C}ontext \textbf{D}istillation (TTCD), a TTT framework that introduces a self-supervised objective for allocating limited memory capacity for future use. Specifically, TTCD uses a long-window teacher to supervise the fast weights of a short-window student, where the hidden-state discrepancy between them offers a dense, self-supervised signal guiding the model to memorize the contextual information crucial for future token predictions. We focus on an in-place variant: In-Place TTCD (IP-TTCD), which uses the existing MLP parameters as the fast weights. Experiments on long-context language modeling tasks show IP-TTCD consistently outperforms DeltaNet, Gated DeltaNet, sliding-window attention, and TTT when pre-trained from scratch. Furthermore, IP-TTCD allows pre-trained transformer models to adapt their parameters during inference through continual pre-training, gaining long-context capabilities with only a lightweight architectural augmentation. Our results position TTCD as a step toward architectural continual learning.

Polymer property prediction and inverse generative design targeting desired properties are two crucial tasks in machine learning-assisted polymer design. While the former has received considerable attention, there have been limited methods developed for the latter. Existing methods focus on single-property optimization in the generative process, whereas accurate prediction of macroscopic material behavior requires simultaneous control of multiple physical properties. In this paper, we provide a transformative framework for direct optimization of a large collection of polymer properties. We propose PolymerGPT, a decoder-based GPT model that incorporates up to 37 commonly used polymer properties into the generative process via learned conditioning prefixes. It also supports a scaffold condition that specifies a desired scaffold for predicted structures. Our experimental results demonstrate that PolymerGPT achieves exceptional performance for unconditional and conditional generation while maintaining high validity, uniqueness, and novelty. Conditioning on five key properties yields generated structures whose predicted values closely match all target properties simultaneously.

The normalized Transformer (nGPT) realizes hyperspherical representation learning by constraining model parameter vectors and activation vectors to the unit hypersphere. In this paper, we describe a practical training recipe for nGPT and evaluate it on modern hybrid Mamba-2--Transformer Mixture-of-Experts (MoE) models. The recipe introduces Logit Gradient Preconditioning, Logarithmic Learning Rate Decay, GatedAdamW, angular update control, and optional exploration mechanisms. Compared with an unnormalized model of the same hybrid MoE architecture trained with AdamW, the 30B-total-parameter nGPT model reaches the same validation loss using approximately half as many training tokens. The recipe scales across the models considered, which contain up to 30B total parameters.

Reliable forecasting of nonlinear physical systems underpins scientific discovery and engineering decision-making. Yet high-fidelity simulations are prohibitively costly, and machine-learning surrogates can be opaque and encode assumptions about system dynamics, limiting generalizability. Pretrained transformers mapping synthetic ODE trajectories to equations offer interpretable alternatives, promising transfer without system-specific equation knowledge. Transferring them reliably to high-dimensional physical data, however, remains an open challenge. We develop a verifier-guided (VG) workflow around ODEFormer as a symbolic backbone, using dynamical and physical-admissibility criteria to select from a multi-trajectory candidate equation pool, enabling transfer. On canonical Van der Pol oscillators, VG outperforms the original ODEFormer workflow across held-out initial conditions. We then address vortex shedding, a phenomenon occurring in atmospheric and plasma systems of societal relevance, through coordinate reduction and symbolic discovery at fixed and varying Reynolds numbers. VG discovers fixed-parameter reduced-order equations that recover the fundamental shedding oscillator and higher harmonics without a wake-specific candidate library or prescribed Navier-Stokes structure, while the cross-parameter model generalizes to withheld regimes. Reconstruction fidelity alone did not determine symbolic discoverability, highlighting the importance of compatibility between latent dynamics and the backbone's pretraining distribution. This work establishes a verifier-guided neural-to-symbolic methodology for interpretable and physically auditable forecasting in the natural sciences.

For any E-commerce website it is a nontrivial problem to build enduring advertisements that attract shoppers. It is hard to pass the creative quality bar of the website, especially at a large scale. We thus propose a programmatic solution to generate product advertising headlines using retail content. We propose a state of the art application of Reinforcement Learning (RL) Policy gradient methods on Transformer based Masked Language Models. Our method creates the advertising headline by jointly conditioning on multiple products that a seller wishes to advertise. We demonstrate that our method outperforms existing Transformer and LSTM + RL methods in overlap metrics and quality audits. We also show that our model-generated headlines outperform human submitted headlines in terms of both grammar and creative quality as determined by audits.

Recent breakthroughs in foundation models and Large Language Models (LLMs) have introduced new opportunities for studying and decoding genomic sequences. Several state-of-the-art approaches, such as DNABERT2, rely on transformer-based architectures, while others, such as ConvNova, still build upon more conventional convolutional models. However, systematic benchmark comparisons across these methods remain scarce. Given that transformer-based models require extensive and costly pretraining, it is crucial to evaluate whether their performance gains justify this overhead. Moreover, LLMs such as DNABERT2 typically rely on Byte Pair Encoding (BPE) tokenization, whose relevance for DNA sequence representation is still debated within the genomics community. In this work, we investigate three key questions: (i) do transformer-based models provide sufficient improvements on fine-tuning tasks upon heavy pretraining, (ii) what is the actual contribution of pretraining in this setting, and (iii) how does BPE tokenization impact performance on genomics-related tasks?

Matrix-aware optimizers such as Muon and Muown have recently shown strong empirical performance for pre-training Transformers. In particular, Muown separates each weight matrix into row magnitudes and an un-normalized direction variable, updating the former with Adam and the latter with Muon. We show that the directional update of Muown is equivalent to a Riemannian step on the normalized directions, while the magnitude of the un-normalized parameterization only modulates the angular step size. This explains the step-size stability of Muown and suggests making the angular step size explicit. The resulting method, AngularMuown, optimizes directly over the normalized directions and uses a schedulable angular multiplier decoupled from the radial magnitude update. AngularMuown improves over Muown and, at the time of writing, a preliminary version is leading the per-optimizer category of the modded nanoGPT speedrunning competition. Further experiments on Qwen2-0.5B, and 1.1B parameter mixture-of-experts models confirm the algorithm scales beyond small models. An implementation of the algorithm is available at https://github.com/fhueb/angular-muown

Linear mode connectivity (LMC) provides a promising foundation for understanding and merging independently trained neural networks, but existing methods typically optimize the interpolation path from only one model endpoint, limiting their scalability and effectiveness for large pretrained transformers. We propose a novel and scalable framework for enabling LMC-based model merging to {\em billion-parameter pretrained transformers}. Our method applies properly parameterized functionality-preserving weight transformations to align functionally equivalent solutions, and introduces a dual learning procedure in which both models jointly learn their corresponding transformations toward a shared linear interpolation path. This bidirectional optimization substantially reduces interpolation barriers and enables more reliable merging across large-scale architectures. Empirically, we show that our approach achieves near-zero loss barriers on WikiText for language models with medium-sized parameters, representing, to our knowledge, the first demonstration of near-barrier-free linear connectivity at this scale. In the vision domain, ViT-L maintains above 69% ImageNet top-1 accuracy throughout the interpolation path, while modern billion-parameter LLMs exhibit only small loss barriers. These results suggest that properly resolving parameter symmetries enables large pretrained Transformers to be connected and merged through simple linear paths with substantially improved interpolation performance. Code: https://github.com/VILA-Lab/Dual-Learned-Matching .

Accurate document layout analysis remains a critical bottleneck for document parsing systems, due to the intricate coupling among heterogeneous document layout elements, geometric distortions (\eg, paper warping and bending, perspective variations), and reading order within diverse layout structures. Existing approaches typically rely on fragmented multi-stage pipelines or computationally heavy generative Transformer architectures, leading to error propagation and limited efficiency. In this paper, we present RT-DocLayout, a highly efficient end-to-end framework for document layout analysis, designed as a front-end for document parsing tasks. The proposed model unifies classification, detection, pixel-level segmentation, and reading order prediction for layout elements within a single 33M-parameter architecture. Built upon the RT-DETR, our key contribution is a unified multi-task formulation within a single query-based decoder that simultaneously classifies, regresses bounding box, generates masks, and constructs relationship to reason reading order. By jointly learning geometric and structural representations, RT-DocLayout introduces multi-task optimization that substantially improves robustness under real-world document distortions. Extensive experiments on public benchmarks demonstrate state-of-the-art performance in document layout analysis while maintaining real-time inference speed(132.1 FPS). When coupled with downstream OCR engines, RT-DocLayout significantly improves full-document reconstruction quality, providing a scalable and practical foundation for real-world document intelligence systems.

Quran Automatic Speech Recognition (ASR) aims to convert Quranic recitation into text, enabling applications such as aided memorisation tools and Quranic search engines. However, existing ASR models often exhibit high Word Error Rates (WER) on user-recited verses and lack full coverage of the Quranic corpus. This paper presents a systematic empirical study of domain-specific fine-tuning of pretrained Transformer-based models for Quranic ASR, using advanced speech feature extraction methods: Wav2Vec2.0, HuBERT, and XLS-R. These models apply self-supervised learning by masking portions of input audio and using Transformer architectures to learn context-aware speech features. The pretrained models are fine-tuned on a filtered Quranic dataset exceeding 870 hours of professional and user recitations. Through comprehensive ablation studies across feature extractors, output label formats, training strategies, and clip durations, we identify the key factors that affect transcription accuracy in this domain. Our best-performing configuration achieves a WER of 0.08 on the EveryAyah subset and 0.11 on the combined EveryAyah+Tarteel setting, representing roughly a five-percentage-point gain over the Citrinet baseline (WER = 0.163) while reducing combined-model training time from 140 hours to 40 hours. Arabic text without diacritics yields the best fine-tuning results, and Wav2Vec2-XLSR-53 provides the strongest overall representation. Future work includes improving dataset quality and developing phoneme-aware models to extract deeper speech feature representations for Tajweed-sensitive applications.

Recent deep learning methods for Landsat and Sentinel-2 reflectance time series reconstruction remain limited by restricted spectral coverage, limited geographic scalability, or patch-based designs with short temporal contexts. We present HLS-GPT, a large-scale generative pretrained Transformer model for reconstructing NASA Harmonized Landsat Sentinel-2 30 m surface reflectance for all bands, any date, and any pixel location. HLS-GPT uses a hierarchical Transformer architecture to handle the different spectral band configurations of Landsat and Sentinel-2 and operates on single-pixel 12-month time series. To capture geographic and seasonal variability, the model was trained with nine years of HLS time series from more than 0.25 million training pixels across the conterminous United States. A random cropping and masking strategy extracts 12-month periods with varying start dates across epochs, masks 50% of valid observations, and trains the model to reconstruct the masked reflectance values from the remaining observations. Evaluation using more than 62,000 independent test pixels shows robust reconstruction under diverse land surface conditions, including complex crop phenology and sparse, irregular observations. Leave-one-observation-out evaluation achieved reconstruction RMSE below 0.026 for all HLS spectral bands, with relative RMSE below 35% for visible bands and below 13% for other bands. Red-edge band errors were comparable to red and near-infrared errors despite the absence of red-edge bands on Landsat. Sensitivity analyses that randomly masked 10% to 90% of test observations showed only modest degradation when 10% to 50% of observations were masked, with all-band RMSE below 0.028. Image reconstruction over nine independent 109 by 109 km CONUS HLS tiles further demonstrates that HLS-GPT outperforms two conventional methods and the NASA-IBM Prithvi model.

Inverse design of heterogeneous catalysts remains challenging because catalyst surfaces exhibit substantial structural complexity with coupled surface-adsorbate interactions across a vast chemical space that is difficult to explore efficiently through conventional screening alone. Although machine learning-based high-throughput screening has accelerated catalyst discovery, its efficiency inevitably declines as the search space grows, motivating the development of generative models that can directly construct catalysts with target properties. Here, we present a conditional catalyst generative model based on the Generative Pretrained Transformer architecture with a numerical embedding layer that enables the generation of catalyst structures conditioned on both categorical and continuous properties within a single autoregressive framework. The model was pretrained on 133 million catalyst structures and subsequently fine-tuned on approximately 460,000 optimized structures with associated categorical properties and binding energies for conditional generation. The resulting model achieved 98% structural validity, 95% optimization validity, and high categorical condition fidelity, with a 93 % joint match rate for adsorbate type and composition. For binding energy conditioning, the match rate of approximately 20% represents a four-fold improvement over the baseline training distribution, and the generated distributions shift systematically toward the target values, enabling a 1.5 to 4-fold improvement in screening efficiency for reaction-targeted catalyst discovery without additional fine-tuning. These results show that large-scale autoregressive pre-training, combined with explicit property conditioning, provides a practical route toward controllable catalyst generation and accelerated catalysts discovery.

A feasibility and dynamics study of the Reservoir Attention Network (RAN), an architecture that injects a fixed, randomly-initialized reservoir into the mid-layer attention of a pretrained transformer to carry state across forward passes. Experiments span GPT-2 (124M, 355M) to Qwen2.5 (0.5B, 1.5B) on a single consumer GPU. The tasks are minimal probes chosen to isolate individual mechanisms; the broader always-alive agent vision is treated throughout as compute-limited future work, not a claim of this paper. The reservoir is left untrained (fixed random) by design: this isolates whether untrained recurrent dynamics alone suffice to carry usable cross-pass state, leaving trained recurrence as a complementary, more expensive direction.

The Transformer architecture is widely regarded as the most powerful tool for natural language processing, but due to a high number of complex operations, it inherently faces the issue of high energy consumption. To address this issue, we consider Spiking Neural Networks (SNNs), which are an energy-efficient alternative to conventional Artificial Neural Networks (ANNs) due to their naturally event-driven approach to processing information. However, this inherently makes them difficult to train. Often, many SNN-based models circumvent this issue by converting pre-trained ANNs. More recently, attempts have been made to design directly trainable SNN-based adaptations of the Transformer model structure. Although the results showed great promise, the application field was computer vision. Moreover, the proposed model incorporates only encoder blocks. In this paper, we propose SpikeDecoder, a fully SNN-based implementation of the Transformer decoder block, for applications in natural language processing. In a series of experiments, we analyze the impact of exchanging different blocks of the ANN model with spike-based alternatives to identify trade-offs and significant sources of performance loss. We further investigate the role of residual connections and the selection of SNN-compatible normalization techniques. Besides the work on the model architecture, we formulate and compare different embedding methods to project text data into spikes. Finally, we demonstrate that our proposed SNN-based decoder block reduces the theoretical energy consumption by 87% to 93% compared to the ANN baseline.

We introduce Humanoid-GPT, a GPT-style Transformer with causal attention trained on a billion-scale motion corpus for whole-body control. Unlike prior shallow MLP trackers constrained by scarce data and an agility-generalization trade-off, Humanoid-GPT is pre-trained on a 2B-frame retargeted corpus that unifies all major mocap datasets with large-scale in-house recordings. Scaling both data and model capacity yields a single generative Transformer that tracks highly dynamic behaviors while achieving unprecedented zero-shot generalization to unseen motions and control tasks. Extensive experiments and scaling analyses show that our model establishes a new performance frontier, demonstrating robust zero-shot generalization to unseen tasks while simultaneously tracking highly dynamic and complex motions.

Large language models (LLMs) show promise in generating supportive responses for mental health queries, but improving their usefulness, empathy, and safety often requires substantial compute, expert input, and labeled data. At the same time, deploying proprietary, cloud-based models for mental health-related interactions raises important privacy and data-governance concerns, given the sensitivities. To address this challenge, we introduce LLUMI setup that can be hosted in-house within protected environments. LLUMI consists of two complementary components: a generation model (GM), which drafts supportive responses to mental health queries, and an improvement model (IM), which revises an initial human-crafted response. We leverage feedback signals from Reddit mental health communities, using community endorsement patterns such as upvotes and downvotes to construct chosen-rejected response pairs for Supervised Fine Tuning (SFT) and Direct Preference Optimization (DPO). We further align LLUMI using human evaluation across five dimensions: readability, empathy, connection, actionability, and safety. Our results show that, despite relying on smaller open-source models rather than proprietary cloud-based GPT models, LLUMI achieves comparable performance across linguistic analyses and human evaluations. These findings suggest that open-source models, when trained with community-derived preference signals, can support high-quality mental health support assistance while offering a more privacy-preserving alternative for sensitive support contexts.

We present a three-step recipe for identifying attention-head circuits in pretrained transformers. A per-head spectral signal -- the time-integrated participation ratio of each head's attention output -- ranks heads doing sustained content-dependent computation without labels or attribution gradients. A task-pattern screen filters this general indicator into a task-specific candidate circuit, and group ablation against a matched-random control completes the causal claim. We validate across an 8x parameter range (51M to 1B-active / 7B-total), two architecture families (dense, mixture-of-experts), and four pretraining pipelines. The recipe ports: a 2-6 head induction circuit is causally necessary in every model tested, with a 94-100% drop in synthetic-induction top-1 after ablation. The spectral signal is predictive without supervision: on six independent seeds of a 51M-parameter probe model, the same computation identifies the seed-specific circuit on each seed. The fraction of heads doing identifiable specialized computation is conserved at 17-19% across the Pythia family (124M to 410M), while specific induction circuits stay 3-11 heads -- sublinear in total head count. This paper is the methodology anchor of a three-paper program; companion papers extend the recipe to developmental trajectories during pretraining and to composed-task circuits where pattern selectivity decouples from task-causal structure.

The Cognitive Categorical Transformer (CCT) is a 306M-parameter architecture that augments a pretrained GPT-2 Small backbone with cognitively grounded components derived from category theory and several inspirations from cognitive science. Under a matched-step protocol (215,000 optimizer steps, matched data, matched optimizer and schedule) on WikiText-103, CCT reaches 21.27 validation perplexity, compared with 24.19 for an identically fine-tuned GPT-2 Small baseline. The architecture therefore contributes a 2.92 PPL (12% relative) reduction beyond what in-domain fine-tuning alone provides. A retrain-from-scratch ablation that holds GT-Full simplicial message passing bypassed across the entire seven-phase activation schedule reaches 23.72 PPL, localizing 84% of the architectural improvement (2.45 of 2.92 PPL) to GT-Full. We present the first ablation-validated evidence that simplicial message passing improves language-model perplexity at the 306M-parameter scale on WikiText-103. Published GPT-2 Large reaches 22.05 zero-shot PPL on WikiText-103 with 6.2x more parameters than GPT-2 Small; this paper treats that number as an external published reference, not as the architectural benchmark. Three negative results on consistency-style categorical priors (sheaf smoothing, adjunction round-trip, curvature regularization) and the joint structural-prior result for GT-Full and PrecisionWeightedPP together support an empirical pattern termed the structure/consistency distinction, in which categorical priors that add new topology improve language modeling and those that enforce a consistency identity do not.

Email importance labeling has long been a critical yet challenging problem for businesses and individuals. Traditional approaches; such as keyword matching, user-defined rules, and sender-based heuristics; demand extensive manual feature engineering and fail to scale effectively or generalize. Recent advances in large language models (LLMs) demonstrate strong potential and a natural fit for this task, offering deep contextual understanding and superior labeling quality. However, using LLM models like GPT-4.1 at enterprise email volumes incurs prohibitive computational costs and hinders real-world deployment. We explore the trade-off space of using alternative labeling schemes as opposed to GPT4.1 scale LLMs, with the goal of achieving near GPT level labeling quality with significantly lower cost. We develop Argo, an enterprise email labeling framework, where we construct a profiler to efficiently search the cost quality trade-off space of labeling and identify cost-efficient alternatives to labeling emails. Additionally, we design an on-demand provisioning scheme to intelligently scale Argo with real time load, to minimize cost increases during peak load inference. Over 3 open-source email datasets, Argo achieves 148-167X inference cost reduction with negligible quality degradation and 20-640000X lower profiling costs, making large-scale, context-aware email labeling practical for enterprises.

Can language-pretrained transformers become effective time-series forecasters, and why? In this paper, we show that cross-modal transfer arises because language pretraining preconditions time series training with a reusable manifold. A linear probe on frozen LLM states decodes realistic time-series trajectories without paired supervision, and retrieval in this projected space yields competitive forecasts, showing that structure and dynamics exist before finetuning. Pretrained initialization also improves optimization, producing coherent gradients and a highly anisotropic loss landscape unlike random initialization. Finetuning then acts as low-dimensional alignment, reusing existing directions rather than learning temporal primitives from scratch, as evidenced by low-rank updates, subspace alignment, and shared features for periodicity, trend, and repetition. Together, these results support a geometric account of LLM-to-time-series transfer: language pretraining builds the manifold, and finetuning projects numerical dynamics onto task-relevant directions.

This paper presents MiniGPT, a compact from-scratch implementation of GPT-style autoregressive language modeling in PyTorch. The aim is to rebuild the core GPT pipeline from first principles after studying the design of nanoGPT by Andrej Karpathy, while keeping the model and training code independently written in a single notebook. MiniGPT implements token and positional embeddings, causal multi-head self-attention, pre-LayerNorm Transformer blocks, residual connections, feed-forward MLP layers, next-token cross-entropy training (teacher forcing), validation tracking, checkpoint selection, and autoregressive text generation. This paper evaluates the implementation on Tiny Shakespeare dataset using character-level tokenization. A baseline 0.83M-parameter model reaches a validation loss of 1.7236 after 3000 training iterations. A stronger 10.77M-parameter configuration, using a larger context length and improved training settings, reaches a best validation loss of 1.4780 and generates text with recognizable Shakespeare-style dialogue structure. MiniGPT does not introduce a new language-model architecture. Instead, it documents a clear and reproducible implementation path from raw text to trained character-level generation, including design choices, training behavior, generation quality, and practical limitations.

What matters more for building foundation models for wireless packet traces: the tokenizer or the architecture or both? To answer this question, we build on PLUME Anonymous [2026], which introduced protocol-aware tokenization for 802.11 traces; we scale model depth and transfer the same tokenizer to a fundamentally different architecture family. A deeper GPT (PLUME-DEEP, 24 layers) reaches 98.2% top-1 accuracy, gaining 32 points over the original 12-layer design, while a Mamba-2 state-space variant (PLUME-MAMBA) achieves 96.1% with 1.7x higher throughput and 2x longer context. The key insight emerges from a controlled 2x2 comparison across tokenizers and architectures: changing the tokenizer swings accuracy by 32 points; changing the architecture moves it by only 2. Protocol-aware tokenization is the primary performance lever, and the backbone becomes a deployment knob trading accuracy for speed.

A causal-decoder block is hierarchical: lower layers build the residual basis that upper layers attend over. We identify a failure mode in GPT pretraining: upper layers commit to sharp attention patterns before lower-layer features stabilize. We call this premature upper-layer attention specialization. Temporarily slowing only upper-layer Q/K projections during early training improves final perplexity and downstream accuracy without altering other parameters; it prevents upper attention from collapsing onto an immature residual basis. In LLaMA-style blocks, the same intervention is nearly unnecessary. Through ablations, we isolate multiplicative gated FFNs (not RMSNorm or bias removal) as the component that suppresses the upstream residual writes driving the failure. A pathwise analysis unifies both findings: the learning-rate intervention reduces a step-size factor, while gated FFNs reduce a residual-energy factor on the same growth pathway. Our results identify upper-layer Q/K timing as a concrete interaction point between decoder architecture and optimization.

Hybrid State-Space models combine Attention with recurrent State-Space Model (SSM) layers, balancing eidetic memory from Attention with compressed fading memory from SSMs. This yields smaller Key-Value caches and faster decoding than Transformers, along with a richer architectural design space. Exploring that design space at scale has so far required training from scratch, a barrier that has kept most large-model Hybrid research within a narrow range of architectures. We introduce Priming, a method that turns Hybrid architecture design from a pre-training problem into a knowledge transfer one. Priming initializes a Hybrid model from a pre-trained Transformer and, through short alignment and post-training phases, recovers downstream quality using less than 0.5% of the source model's pre-training token budget. Priming is agnostic to the source Transformer family (e.g., Qwen, Llama, Mistral), model class (dense or Mixture-of-Experts), and model scale. Priming enables us to run the first controlled comparison of SSM layer types at scale under identical conditions. We evaluate, Gated KalmaNet (GKA), Gated DeltaNet (GDN), and Mamba-2, and show that their expressiveness hierarchy, GKA>GDN>Mamba-2, directly predicts downstream performance on long-context reasoning tasks. We scale Priming to 8B/32B reasoning models with native 128K contexts. Our Hybrid GKA 32B improves over its source Qwen3-32B by +3.8 average reasoning points, while staying within 1% of a Transformer post-trained on the same data and enabling up to 2.3x higher decode throughput. To foster research on Hybrid architectures, we release a model zoo of primed Hybrid models for long-context reasoning and instruction following, together with the Priming training and inference code (Sequence Parallelism algorithms for long-context training, optimized GKA kernels, and vLLM serving plugin), all under Apache~2.0 License.

This paper investigates how GPT-based tools can assist in building reusable analytical spreadsheet models. After a screening, we evaluate five GPT extensions and select Excel AI by pulsrai.com for detailed testing. Through structured experiments on simple problem statements, we assess Excel AI's performance against the ERFR criteria (each input in a cell; cell formulas; no hardwired numbers; labels; accurate). Results show that while Excel AI can produce well-structured models, it is inconsistent and often non-reproducible. We identify two central challenges - "the problem of confidence" and "the problem of workflow" - which highlight the need for skilled users to verify and adapt GPT-generated spreadsheets. Though GPTs show promise for generating draft models that may reduce development time or lower skill requirements, current tools remain unreliable for professional use. We conclude with recommendations for future research into prompt engineering, reproducibility, and larger-scale modeling tasks.

An earlier paper (Hong, Potteiger, and Zapata 2026) established that an unoptimized GPT 4.1 prompt predicts fan-reported experience ratings within one point 67% of the time from open-ended survey text. This paper tests the relative impact of prompt design and model selection on that performance. We compared four configurations on approximately 10,000 post-game surveys from five MLB teams: the original baseline prompt and a moderately customized version, crossed with three GPT models (4.1, 4.1-mini, 5.2). Prompt customization added roughly two percentage points of within +/-1 agreement on GPT 4.1 (from 67% to 69%). Both model swaps from that best configuration degraded performance: GPT 5.2 returned to the baseline, and GPT 4.1-mini fell six percentage points below it. Both levers combined were dwarfed by the input itself: across capable configurations, accuracy varied more than an order of magnitude more by the linguistic character of the text than by the choice of prompt or model. The ceiling has two parts. One is a bias in how the model reads text, which prompt design can correct. The other is a difference between what fans write about and what they actually decide, which no engineering can close because the missing information is not in the text. Prompt customization moved the first part; model selection moved neither reliably. The result is not that "prompt engineering helps a little" but that prompt engineering helps in a specific and predictable way, on the part of the ceiling it can reach.

The importance of clear and correct text in legal documents cannot be understated, and, consequently, a grammatical error correction tool meant to assist a professional in the law must have the ability to understand the possible errors in the context of a legal environment, correcting them accordingly, and implicitly needs to be trained in the same environment, using realistic legal data. However, the manually annotated data required by such a process is in short supply for languages such as Romanian, much less for a niche domain. The most common approach is the synthetic generation of parallel data; however, it requires a structured understanding of the Romanian grammar. In this paper, we introduce, to our knowledge, the first Romanian-language parallel dataset for the detection and correction of grammatical errors in the legal domain, RoLegalGEC, which aggregates 350,000 examples of errors in legal passages, along with error annotations. Moreover, we evaluate several neural network models that transform the dataset into a valuable tool for both detecting and correcting grammatical errors, including knowledge-distillation Transformers, sequence tagging architectures for detection, and a variety of pre-trained text-to-text Transformer models for correction. We consider that the set of models, together with the novel RoLegalGEC dataset, will enrich the resource base for further research on Romanian.

Converting a pretrained Transformer into a more efficient hybrid model through distillation offers a promising approach to reducing inference costs. However, achieving high-quality generation in distilled models requires careful joint design of both the student architecture and the distillation process. Many prior distillation works evaluate downstream multiple-choice benchmarks by ranking candidate answers with log-likelihood rather than requiring autoregressive generation, which can obscure important differences in model quality. For example, on overlapping benchmarks, we show that a 7B distilled model that nearly matches its teacher to within 0.2 pp under log-likelihood scoring falls behind by 20.8 pp when it must generate answers autoregressively. We investigate this phenomenon with GenDistill, a multi-stage pipeline we designed for distilling a pretrained Transformer into an efficient Hybrid Kimi Delta Attention (Hybrid-KDA) student. Using it as a controlled testbed on Qwen3-0.6B, we systematically ablate six design axes (training objective, loss masking, training duration, dataset selection, parameter freezing, and architecture choice) and evaluate every choice under both log-likelihood and generation-based protocols. We find that log-likelihood-based evaluation consistently underestimates the gap between teacher and student, and can in some cases reverse the ranking of design choices, so conclusions drawn from perplexity-only evaluation may be misleading. Among the factors we study, dataset selection, completion-only masking, and freezing attention layers during post-training have the largest impact on generation quality. Our best distillation recipe, using a Hybrid-KDA model as the student, retains 86-90% of teacher accuracy on knowledge benchmarks while reducing KV cache memory by up to 75% and improving time-to-first-token by 2-4x at 128K-token contexts.

Pretrained transformers provide rich, general-purpose embeddings, which are transferred to downstream tasks. However, current transfer strategies: fine-tuning and probing, either distort the pretrained geometric structure of the embeddings or lack sufficient expressivity to capture task-relevant signals. These issues become even more pronounced when supervised data are scarce. Here, we introduce Freeze, Diffuse, Decode (FDD), a novel diffusion-based framework that adapts pre-trained embeddings to downstream tasks while preserving their underlying geometric structure. FDD propagates supervised signal along the intrinsic manifold of frozen embeddings, enabling a geometry-aware adaptation of the embedding space. Applied to antimicrobial peptide design, FDD yields low-dimensional, predictive, and interpretable representations that support property prediction, retrieval, and latent-space interpolation.

Efficiently scaling Large Language Models (LLMs) necessitates exploring alternatives to dominant autoregressive (AR) methods, with Masked Diffusion Models (MDMs) emerging as candidates. However, comparing AR (typically decoder-only) and MDM (often encoder-only) paradigms is confounded by differing architectures, obscuring true algorithmic and efficiency trade-offs. This research decouples these factors by evaluating MDMs within a decoder-only framework to: (1) Equitably compare MDM (as Any-Order AR) and standard AR paradigms through discrepancies on orders. (2) Investigate MDM architectural impacts on computational efficiency. We show decoder-only MDMs, despite a larger modeling space, can achieve significant inference speedups ($\sim25\times$) and comparable perplexity with techniques like temperature annealing, offering a path to reduced inference compute. This work provides insights for developing more computationally efficient foundation models by disentangling core modeling choices from architectural influences. Code is available at https://github.com/scxue/AO-GPT-MDM.

We present MetaTT, a Tensor Train (TT) adapter framework for fine-tuning of pre-trained transformers. MetaTT enables flexible and parameter-efficient model adaptation by using a single shared TT to factorize transformer sub-modules. This factorization indexes key structural dimensions, including layer and matrix type, and can optionally incorporate heads and tasks. This design allows MetaTT's parameter count to scale with the sum, rather than the product, of the modes, resulting in a substantially more compact adapter. Our benchmarks compare MetaTT with LoRA along with recent state-of-the-art matrix and tensor decomposition based fine-tuning methods. We observe that when tested on single-task standard language modeling benchmarks, MetaTT achieves competitive parameter efficiency to accuracy tradeoff. We further demonstrate that MetaTT performs competitively when compared to state-of-the-art methods on multi-task learning. Finally, we leverage the TT decomposition to design a rank adaptive optimizer inspired by the DMRG method from many-body physics. Our results demonstrate that integrating this approach with AdamW enhances optimization performance for a specified target rank.

Generative Pretrained Transformers (GPTs) are foundational Large Language Models (LLMs) for text generation. However, individual LLMs often produce inconsistent outputs and exhibit biases, limiting their representation of diverse language patterns. The closed-source nature of many powerful LLMs further restricts industry applications due to data privacy concerns. Inspired by successes in text generation, LLM ensemble techniques are now increasingly explored for code generation. This article reviews these emerging ensemble approaches to enhance understanding, encourage further research, and promote practical implementation in both text and code generation. We categorize LLM ensembles into seven main methods - weight merging, knowledge fusion, mixture-of-experts, reward ensemble, output ensemble, routing, and cascading - analyzing capabilities of those approaches. Our findings highlight key benefits such as improved diversity representation, enhanced output quality, and greater application flexibility. These insights aid model selection for real-world tasks and crucially, lay groundwork for extending ensemble strategies to multimodal LLMs.

Pretrained Transformers keep what they learned in their weights and lose what they observe once a session ends. The first version of this paper proposed a Retention Layer, a persistent memory that a Transformer block reads with attention and writes during use. Because most of what a deployed model could retain is produced by other agents, this revision treats deciding what to keep as a social learning problem: when to rely on observed behaviour, whom to learn from and how much independent agreement to require. We give a corrected specification of the layer, which reduces exactly to the base Transformer when its memory is empty. We derive the memory's lifecycle from social learning strategies: encoding gated by surprise, observed outcomes and earned credibility; consolidation by a credibility weighted quorum of distinct, recent sources that must also outweigh every rival behaviour; and reconsolidation by the outcomes of reproduction. We prove that raising the quorum lowers the risk of consolidating a coordinated false template exponentially while delaying true templates only linearly, and that relative consolidation protects only while credible honest evidence arrives faster than adversarial evidence. In a simulation with world drift and three memory-poisoning attacks, the lifecycle reached accuracies of 0.989 to 0.996, against 0.62 to 0.63 for the ungated first version design, and kept attack success at or below 0.07 when 30% of the observations about a target were adversarial. As predicted, it amplified attacks once adversarial evidence outpaced honest evidence. Experience with a long running assistant adds two rules: a model's own outputs must not count as support, and a user's testimony should be kept after one mention. We close with an evaluation protocol for language models.