Agricultural Prediction

Reliable, timely crop-yield forecasts are essential for market stability and risk management, yet many approaches rely on costly or hard-to-scale inputs. We present a frugal, transferable, and architecture-agnostic deep learning framework that uses routine weather as the only time-varying input plus two lightweight static context inputs (crop year and an agro-environmental label) to capture long-run change and regional heterogeneity, while supporting multiple sequence encoders under identical data requirements. Using a 20-season Brazilian soybean case study (2001/02-2020/21) with leave-one-year-out cross-validation, we benchmark MLP, CNN, LSTM, CNN-LSTM, a Transformer encoder and the Mamba state-space model against linear ridge regression and a five-year moving-average "farmer" baseline. All deep learning variants outperform ridge, and all sequential encoders surpass the non-sequential MLP. The Transformer achieves the best national accuracy (RMSE 149 kg ha^-1; rRMSE 5.3%; R^2 = 0.784), reducing error by 47.6% relative to the farmer baseline. In-season forecasts improve monotonically from early- to late-season issuance, reaching approximately 50% lower error than the baseline at the latest forecast point. Ablations indicate that the agro-environmental label and spatial instance expansion (multiple grid-node weather sequences per municipality-year) contribute positively without increasing input complexity. SHAP diagnostics suggest crop year explains most of the long-run trajectory, whereas within-season weather and agro-environmental context primarily drive interannual deviations, with moisture/cloud and thermal-demand variables dominating. Overall, the framework is straightforward to deploy across other crops and geographic regions and is naturally compatible with operational weather forecasts for routine monitoring.

Accurate daily predictions of cold hardiness in woody plants are critical in regions where freezing temperatures can damage dormant buds and reduce seasonal yield. Existing biophysical, hybrid, and deep learning models have shown high predictive accuracy when trained on local data but remain largely site-specific. The limited availability of cold hardiness data, coupled with the lack of principled methods for transferring cold hardiness predictions to new regions and cultivars, has limited the broader adoption and practical utility of these approaches, particularly in data-scarce regions. To address these limitations, we propose a cold hardiness prediction framework that learns a transferable latent representation by capturing region-specific variation through learned embeddings. To enable prediction in previously unseen regions, we infer embeddings from (1) text descriptions of the cultivar and growing region, and (2) limited historical observations, supporting both zero-shot and few-shot transfer. Experiments on datasets from six regions across North America demonstrate that our approach consistently outperforms state-of-the-art cold hardiness prediction methods, yielding more accurate predictions and substantially improving transfer to data-scarce regions.

Accurate yield forecasting at the individual-plant level is critical for precision agriculture and supply-chain planning, yet public datasets capturing both visual growth dynamics and per-plant measurement labels are scarce. In this paper, we introduce a novel, annotated image time-series dataset of 691 sweet pepper plants monitored over two growing seasons, comprising 4837 images with per-plant fruit counts categorized by maturity. We propose a multimodal deep learning framework that fuses high-dimensional image features, extracted using the DinoV3 encoder, with numerical count measurements. Our architecture utilizes a Long Short-Term Memory (LSTM) network to model temporal dependencies and handles irregular sampling intervals common in greenhouse monitoring. Through quantitative experiments, we demonstrate that this multimodal approach reduces RMSE over a persistence baseline by 33% and 38% in the 2022 and 2023 seasons, respectively, with a further 1.2% average gain over a measurement-only model. Furthermore, we employ Deep Ensembles and Gaussian Negative Log-Likelihood (NLL) to provide calibrated uncertainty estimates, with an Uncertainty Calibration Error (UCE) ranging from 0.39 to 0.89 depending on the cross-season evaluation direction, offering a principled confidence signal for real-world agricultural decision-making. We release the dataset and code to support reproducible research and to accelerate development of data-driven yield forecasting methods for horticultural crops.

Remote sensing has become an increasingly valuable tool for agricultural monitoring, particularly through the use of publicly available satellite imagery. However, effectively integrating domain knowledge into machine learning methods remains challenging. This study presents a real-world example of early sugar beet harvest yield forecasting from purely optical Sentinel-2 imagery, demonstrating how a tight integration of domain knowledge and machine learning can lead to synergistic gains. We empirically find that using very small vision transformer patch sizes and all available Sentinel-2 spectral bands improves our model despite being uncommon design choices in the domain. As a practical contribution, we were able to identify a large fraction of low-yield fields in a different year early on in the growth cycle through a modified training setup and a ranking-based detection of underperforming fields.

Machine Learning (ML) algorithms have been widely used to estimate agricultural variables across diverse contexts. However, because the quantity and quality of training data strongly influence performance of ML algorithms, their use can be constrained by limited or incomplete reference data. Synthetic Data Generation (SDG) offers a practical approach to address this issue by producing artificial but realistic samples that preserve key characteristics of the original data. Building on teacher-student knowledge transfer and in-context learning for tabular data, this study proposes a Task-Conditioned SDG (TCSDG) algorithm that pairs a Bayesian Network generator with a transformer-based tabular foundation model (TabICL). The proposed algorithm was evaluated on two agricultural prediction tasks: crop yield prediction and crop type classification. Six benchmark SDG algorithms were also utilized to compare their performance with that of TCSDG. Across twelve study sites, two training-data fractions, four multiplication ratios, and three predictive ML algorithms, augmenting the original data with TCSDG-generated synthetic data improved ML performance in 89% of the crop type classification experiments and 74% of the crop yield prediction experiments. TCSDG also substantially outperformed benchmark SDG algorithms and was the only method to consistently improve ML performance across both tasks at the aggregate level. The study demonstrates that carefully designed and processed synthetic data can improve ML performance in precision-agriculture applications. TCSDG offers a practical and extensible framework for generating synthetic data that supports downstream ML agricultural prediction. The full implementation of TCSDG is publicly available as open source at https://github.com/HamidEbrahimy/TCSDG.

Vegetable prices in Sri Lanka are highly volatile because the market is largely import-isolated, so supply disruptions quickly drive prices up. This study develops a machine learning framework to forecast such volatility by incorporating supply-chain-aware features and explicitly modelling the country's two cultivation seasons, Maha (October-April) and Yala (May-September). An integrated dataset was constructed by combining retail and farmer-gate prices with origin-aligned weather variables, diesel costs, and exchange rates across 12 vegetable varieties and 14 market centres from 2013 to 2019. A gradient-boosted ensemble model (XGBoost and LightGBM) was trained and optimised using Optuna, and unified and season-specific configurations were compared. Results show that season-specific models improve within-season fit, with the Yala-specific model achieving the highest R2 of 0.9420 (95% CI [0.690, 1.000]), while the unified model delivers the best overall predictive accuracy of 90.84% (95% CI [88.34%, 91.52%]) and an R2 of 0.9281 (95% CI [0.760, 1.000]). Notably, the unified model maintains 85.96% accuracy on a completely unseen 2024 hyperinflationary period without retraining, successfully tracking major price surges. These findings suggest that agricultural price movements in import-constrained markets are meaningfully predictable when models capture supply-chain dynamics, offering practical value for early warning and decision making by farmers, traders, and policymakers. Existing studies on Sri Lankan vegetable prices are confined to Autoregressive Integrated Moving Average (ARIMA) and Generalized Autoregressive Conditional Heteroskedasticity (GARCH) applied to single markets, with no supply-chain features, seasonal segmentation, or cross-regime validation.

Sierra Leone's agriculture operates with almost no data-driven decision support, and no published machine learning study has examined the country's crop yields. We ask whether rice yield can be forecast from data Sierra Leone currently has. Using 25 years of FAOSTAT production data (2000-2024) for nine major crops, we train XGBoost, Gradient Boosting, and Random Forest under a strict anti-leakage protocol with expanding-window walk-forward evaluation across seven held-out years, benchmarked against naive persistence. No model trained on crop statistics alone outperforms persistence. Augmenting with free satellite climate data (CHIRPS rainfall, NASA POWER temperature) reverses this result: a climate-only XGBoost reduces forecast error by one third (RMSE 284 vs 428 kg/ha), a gain that holds for a linear model and is robust to excluding the anomalous 2018 season. Early-season (May-June) rainfall is the dominant predictor, implying seasonal yield risk is observable months before harvest. No model anticipated the 2018 collapse, whose origins were institutional rather than climatic. We translate the findings into policy recommendations for Sierra Leone's Feed Salone Strategy, with a fully open-source pipeline.

This paper presents a unified system designed to support precision agriculture by integrating advanced weather prediction, crop recommendation, and a question-answering tool for farmers. We propose two deep learning models -- a Transformer-based Graph Neural Network and a Spatio-Temporal Graph Convolutional Network (STGCN) -- to forecast weather conditions for the next 30 days using data from 1,359 locations in Nepal. The STGCN outperforms the Transformer-based model in accuracy (MSE ~0.011 vs. 0.013), effectively modeling both spatial and temporal dependencies in climate data. These predictions are combined with static soil properties such as pH, moisture, and organic content to generate localized crop recommendations through a scoring algorithm that matches each crop's optimal growing conditions. Additionally, we develop a Retrieval-Augmented Generation (RAG) chatbot that leverages domain-specific agricultural documents to answer farmers' questions in natural language. The entire system is deployed via a mobile application, offering real-time suggestions and conversational support. User feedback confirms the system's usability and relevance, especially in rural settings where personalized farming guidance is limited. Overall, our approach demonstrates how combining machine learning models with local agricultural data can empower farmers with actionable insights, promoting more informed decisions, better crop yields, and increased resilience to climate variability.

In-season crop type mapping is critical for food security in the face of increasingly extreme climate-related threats to crops. Currently, the USDA Cropland Data Layer provides crop type labels at 30m resolution and is available the February after harvest, but no product exists that maps crop types before harvest with satisfactory accuracy that would allow emergency managers to respond to crop threats in near real time. Furthermore, the relative advantages of a wide range of algorithms have not been evaluated in a way that accounts for interannual variability, until this study. Here, Harmonized Landsat-Sentinel surface reflectance imagery time series and crop rotation history information are combined to map corn in Iowa and almonds in California at 30m resolution accurately by early June in unseen years, with robust quantification of uncertainty due to phenology and crop distribution. Thousands of model configurations across ten machine learning algorithms were compared using a year-wise cross-validation and a suite of metrics. Hyperparameter search revealed Support Vector Machines to be the most successful algorithm overall, with a mean F1 score of 0.74 (0.59) across five unseen validation years for almonds by early June in California (corn by early June in Iowa). Interannual variation was a large source of uncertainty, but patterns showed the potential to further improve performance with ensemble approaches or ancillary data. Future work may extend these methods to include multiclass maps of all crop types, CONUS-wide maps, and in-season crop yield forecasting.

Accurate crop yield prediction is crucial for sustainable agriculture and global food security. While existing methods are predominantly developed for single-crop prediction, they often struggle to generalize across diverse crop types, without addressing the unique crop phenological responses that are dynamically modulated by complex weather patterns. In this paper, we propose PhenoYieldNet, a multi-crop yield prediction framework that learns crop-specific phenology by explicitly modeling their responses with temporal drivers. Specifically, we develop a crop-aware temporal decoder consisting of a Crop Phenology Bank (CPB) and a Crop Phenology Attention (CPA) module. The CPB integrates a set of learnable embeddings, which leverage a query to guide the CPA module to learn the most relevant phenology patterns for the specific crop. And the CPA module explicitly captures multi-scale trend and variation components to construct temporal contexts, enabling the model to dynamically adjust the attention across different phenological stages. To learn robust and generalizable features for multi-crop prediction, the encoder is initialized with a pre-trained foundation model, and further adapted via a self-supervised Temporal Contrastive Adaptation strategy to align with agricultural temporal dynamics. Extensive experiments conducted on multi-crop datasets indicate that our proposed method significantly outperforms state-of-the-art methods, exhibiting strong generalization capabilities across different regions and crops.

Accurate crop yield forecasting in commercial soft fruit production is constrained by the data available in typical commercial farm records, which lack the sensor networks, satellite imagery, and high-resolution meteorological inputs that most state-of-the-art approaches assume. We propose a structured LLM agent framework that performs post-hoc correction of existing model predictions, encoding agricultural domain knowledge across tools for phase detection, bias learning, and range validation. Evaluated on a proprietary strawberry yield dataset and a public USDA corn harvest dataset, agent refinement of XGBoost reduced MAE by 20% and MASE by 56% on strawberry, with consistent improvements across Moirai2 (MAE 24%, MASE 22%) and Random Forest (MAE 28%, MASE 66%) baselines. Using Llama 3.1 8B as the agent produced the strongest corrections across all configurations; LLaVA 13B showed inconsistent gains, highlighting sensitivity to the choice of refinement model.

Plant breeding underpins global food security through incremental, accumulating improvements in crop yield, quality and sustainability, achieved via repeated cycles of crop ranking, selection and crossing. Climate change disrupts this process by altering local growing conditions, thereby shifting the relative performance of crop genotypes. Predicting these relative changes in yield is critical for food security. Yet, this problem remains an open challenge in plant breeding, and relatively unexplored within the AI community. We propose MixINN, an approach that first isolates high-quality genotype-environment interaction labels using mixed models, and then predicts these interactions for new crop varieties in future environmental conditions with a deep neural network. We evaluate our method on a corn multi-environment trial across the continental United States and show improved prediction of genotype ranking over current plant breeding methods. MixINN demonstrated superior performance in identifying the 20% most productive corn genotypes, leading to a 5.8% higher average yield, which further improved to 7.2% when targeting specific growing environments. These are competitive results for real-world breeding programs, demonstrating the potential of AI research in accelerating the development of climate-adapted crops, and improving future food security under climate change.

Accurate early warning of vineyard disease risk from environmental observations is essential for timely intervention and more sustainable crop protection. However, many existing studies formulate disease prediction as daily presence classification, which can favor persistence-driven predictions and provide only limited support for actionable short-horizon warning. In this paper, we present an event-based approach for early warning of vineyard disease risk from environmental time series and evaluate it through a vineyard case study. Rather than predicting daily disease status, the task is reformulated to predict transitions into annotated disease-risk periods within a future window of 3-7 days. To reduce fragmentation caused by short interruptions in the binary labels, new events are defined only after a minimum disease-free gap. This formulation encourages models to capture environmental precursors associated with upcoming risk periods instead of merely reproducing temporal persistence. Using multi-year agro-meteorological data, we construct input representations that capture humidity dynamics, rainfall accumulation, temperature variability, and seasonal structure through cyclic temporal encoding. We evaluate representative methods from classical machine learning and deep learning, including XGBoost, Long Short-Term Memory (LSTM) networks, and Temporal Convolutional Networks (TCNs), using both standard classification metrics and an event-oriented early warning protocol. The results show that the event-based formulation supports practical short-horizon warning, while the compared models exhibit distinct trade-offs between event recall, lead time, and false-alert behavior. Overall, the study underscores the importance of problem formulation in environmental time-series learning and demonstrates the value of event-based prediction for vineyard disease warning systems.

Modern crop advisory systems exhibit a critical limitation termed \textit{economic blindness}. These systems primarily optimize for biological yield, often overlooking market price, which can lead farmers toward agronomically sound yet financially unviable decisions. In this paper, we develop Kisan AI, a smart profit-aware crop advisory system that resolves the above-mentioned limitation through a research-driven, full-stack application. We train the Random Forest(RF) classifier model on a nine-feature benchmark dataset, the standard seven agronomic attributes augmented with a \textit{market_price} variable, and evaluated against eight baseline models, considering the evaluation matrices, such as, accuracy, precision, recall, F1-score, and Log Loss. The RF model achieves the highest accuracy of 99.3% and the lowest Log Loss, confirming that the inclusion of market price as a predictive feature is both valid and impactful. We then implement the RF model within a multilingual progressive Web App alongside a Facebook Prophet six-month price forecasting engine and a MobileNetV2 disease detection module. A nine-language AI chatbot powered by the Anthropic Claude API unifies all modules into a single, mobile-installable platform accessible to farmers across India.

Accurate predictions of smallholder maize yields across national boundaries are critical for food security planning in sub-Saharan Africa, yet most published benchmarks report within-country performance that overstates true generalisability. This paper evaluates whether geospatial foundation model embeddings, specifically Prithvi-EO-1.0-100M and ViT-Base, outperform traditional Sentinel-2 spectral features under a Leave-One-Country-Out cross-validation scheme on 6,404 maize field observations from five African countries. The results show a clear generalisability gap: within-country random cross-validation yields moderate R^2 values, but all feature sets perform poorly under cross-country testing, with universally negative R^2. Frozen Prithvi-EO embeddings provide no meaningful advantage over engineered spectral features for cross-country prediction in this setting. The paper argues that the main limitation is a shift in yield distribution between countries rather than representation quality and releases a reproducible negative benchmark for future work.

Crop yield prediction is one of the most important challenge, which is crucial to world food security and policy-making decisions. The conventional forecasting techniques are limited in their accuracy with reference to the fact that they utilize static data sources that do not reflect the dynamic and intricate relationships that exist between the variables of the environment over time [5,13]. This paper presents Attention-Based Multi-Modal Deep Learning Framework (ABMMDLF), which is suggested to be used in high-accuracy spatio-temporal crop yield prediction. The model we use combines multi-year satellite imagery, high-resolution time-series of meteorological data and initial soil properties as opposed to the traditional models which use only one of the aforementioned factors [12, 21]. The main architecture involves the use of Convolutional Neural Networks (CNN) to extract spatial features and a Temporal Attention Mechanism to adaptively weight important phenological periods targeted by the algorithm to change over time and condition on spatial features of images and video sequences. As can be experimentally seen, the proposed research work provides an R^2 score of 0.89, which is far better than the baseline models do.

Accurate prediction of grape phenology is essential for timely vineyard management decisions, such as scheduling irrigation and fertilization, to maximize crop yield and quality. While traditional biophysical models calibrated on historical field data can be used for season-long predictions, they lack the precision required for fine-grained vineyard management. Deep learning methods are a compelling alternative but their performance is hindered by sparse phenology datasets, particularly at the cultivar level. We propose a hybrid modeling approach that combines multi-task learning with a recurrent neural network to parameterize a differentiable biophysical model. By using multi-task learning to predict the parameters of the biophysical model, our approach enables shared learning across cultivars while preserving biological structure, thereby improving the robustness and accuracy of predictions. Empirical evaluation using real-world and synthetic datasets demonstrates that our method significantly outperforms both conventional biophysical models and baseline deep learning approaches in predicting phenological stages, as well as other crop state variables such as cold-hardiness and wheat yield.