Microscopy

Momentum

13 papers in the last four weeks, up 86% on the four weeks before. 0.1% of all new papers.

Jul 13Week of Sep 28

Latest papers 111

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  1. Semantic RGB--Depth Based Surgical Skill Assessment in Microscopic Stereo Videos

    Oct 1, 2026Jecia Z. Y. Mao, Sue M. Cho, Francis X. Creighton +3Rgb-Depth CamerasSurgery

  2. MorphoBranch: A Fine-Structure-Preserving Workbench for Morphometric Analysis of Branched Cellular Structures

    Oct 1, 2026Song Zhiying, Ling Hanyi, Wu Junyi +1Morphometric AnalysisMicroscopy

  3. Benchmarking Vision-Language Models on Synapse Detection and Proofreading in Connectomics

    Sep 29, 2026Yicong Li, Junjie Wang, Leander Lauenburg +5ConnectomeMicroscopy

  4. What Makes High-Magnification Knowledge Transferable? A Study of Cross-Resolution Distillation in Whole-Slide Imaging

    Sep 29, 2026Zhiyuan Yang, Jiahao Cheng, Mahdi S. HosseiniWhole-Slide ImagesCross-Task Knowledge Transfer

  5. BIABench: Evaluating AI agents on real-world bioimage analysis tasks

    Sep 28, 2026Zixuan Pan, Davide Panzeri, Lukas Johanns +5Artificial Intelligence AgentsMicroscopy

  6. AxonSynth: Domain-Randomized Synthetic Data for Zero-Shot 3D Axon Segmentation in Light-Sheet Microscopy

    Sep 25, 2026Edward Gaibor, Kyriaki-Margarita Bintsi, Chiara Mauri +7Interactive 3D SegmentationMicroscopy

  7. QuPAINT: Physics-Aware Multimodal Reasoning for Quantum Material Characterization

    Sep 14, 2026Sankalp Pandey, Xuan-Bac Nguyen, Hoang-Quan Nguyen +4Materials ScienceMicroscopy

  8. Advanced Brain Tissue Imaging with Data-Consistent Diffusion Priors in Laminographic X-Ray Nanoimaging

    Sep 9, 2026Wenxuan Fang, Abraham L. Levitan, Ana Diaz +10ConnectomeMicroscopy

  9. Pretraining and Distillation Matter More Than Architecture Family for Label-Free Single-Cell Classification

    Sep 9, 2026Philip Graemer, Giuseppe Di CaprioPretrainingConvolutional Neural Networks

  10. SkNeXt enables topology-guided neuronal reconstruction from petabyte-scale microscopy data

    Sep 9, 2026Jiayi Ding, Hu ZhaoNeural ReconstructionMicroscopy

  11. Effects of model architecture and learning strategies on deep learning-based recognition of activated sludge microscopic images and comparison with quantitative image analysis

    Sep 8, 2026Suguru Hakoshima, Tomohiro Tobino, Fumiyuki NakajimaMicroscopyDeep Learning Architectures

  12. CRISP: Corneal Confocal Microscopy Real-Time Image Stitching Pipeline

    Sep 7, 2026Qincheng Qiao, Puli Zhang, Jian Zhou +1MicroscopyReal-Time Systems

  13. When Quantization Breaks Memory: Recurrent-State Write-Back in Low-Precision Temporal Inference

    Sep 7, 2026Ismail Erbas, Xavier Intes, Vikas PandeyRecurrent StateBackward Passes

  14. Multimodal Shared Latent Representation of Narration, Microscope and iOCT Images for Phase Recognition in Vitreoretinal Surgery

    Aug 31, 2026Onur Izmitlioglu, Shervin Dehghani, Tarek Ghannoum +2OphthalmologyOptical Coherence Tomography

  15. CORAL: A Benchmark for Structure-aware and Brain-wide Neuron Reconstruction in Light Microscopy

    Aug 31, 2026Zekang Yang, Jiamin Li, Zhenghua Li +3Neural ReconstructionMicroscopy

  16. Clinical Feasibility of Low-Magnification Fluorescence Imaging for Breast Cancer Margin Detection Using Texture Analysis and Deep Learning

    Aug 11, 2026Pouya Afshin, Tianling Niu, Tongtong Lu +6MammographyMicroscopy

  17. Retrieval-Augmented Vision Foundation Models for Robust Leukemia Cell Classification across Multiple Microscopy Datasets

    Aug 11, 2026Carlos Zamora, Hiram Zuniga, Ulises Orozco-Rosas +1Acute Myeloid LeukemiaMitotic Figures

  18. Automatic Field-of-View Adjustment for a View-Expansive Microscope via LSTM-Based Gaze and Pipette Motion Interpretation

    Aug 11, 2026Kenta Yokoe, Takuya Hara, Tadayoshi AoyamaMicroscopyGaze Target Estimation

  19. NeuroRefiner: Morphology-Aware Multi-Agent Refinement for 3D Fluorescence Microscopy Neuron Segmentation

    Aug 10, 2026Haiyang Yan, Jinyue Guo, Yanchao Zhang +6MicroscopyNeuroflex

  20. Multitask Scanning Probe Microscopy

    Aug 10, 2026Aditya Raghavan, Yu Liu, Ian Mercer +2Electron MicroscopyMicroscopy

  21. On-Device Multi-Species Malaria Detection with Uncertainty-Calibrated Slide-Level Aggregation

    Aug 9, 2026Idaya Seidu, Ahmed Tahiru Issah, Charles B. Delahunt +1Accurate Dengue ForecastingAcute Myeloid Leukemia

  22. Agentic self-driving microscopy benchmarks support qualification but do not necessarily generalize to unseen tasks

    Aug 5, 2026Nathan S Johnson, Ian AbshireAgentic BenchmarksMicroscopy

  23. NeuroAdaptTrainer: A Fiji/ImageJ Plugin for YOLO-Based Neuron Segmentation, InteractiveCorrection and Transfer Learning

    Aug 5, 2026Daniela Eraso-Casas, Gerard Villarroya-Pique, Esther Serrano-Pertierra +4MicroscopyYolo26

  24. Beyond Isotropic Assumptions: Continuity-Constrained Segmentation and GPU Morphometry for Nanoscale GBM Analysis

    Aug 4, 2026Arash Fatehi, Robin Ebbestad, Linus Butt +7Morphometric AnalysisVoxel

  25. A Unified Resolution-Conditioned Framework for Orthogonal Line-Scanning Image Fusion

    Aug 4, 2026Yiming Gong, Kai WangVisible Image FusionMicroscopy

  26. Artificial Intelligence for the Characterization of Particles and Fibers by Optical Microscopy

    Aug 1, 2026Simiao Sun, Kenneth Ng, Lynn Lee +6MicroscopyVisual Embeddings

  27. MUL-T: Decoding Spatial Cellular Architecture in Multiplexed Tissue Images

    Jul 30, 2026Farzaneh Seyedshahi, Kai Rakovic, Adalberto Claudio Quiros +2TissueMultiple Instance Learning

  28. MicroZoom: Structure-Preserving Detail Synthesis at Extreme Scale

    Jul 27, 2026Huy Huynh, Jingwei Ma, Brian Curless +2Generative Super-ResolutionMicroscopy

  29. Investigating the Visual Cues of CNNs for Vascular Segmentation: A Case Study in Microscopy and Fundus Imaging

    Jul 25, 2026Weslley dos Santos Silva, Cesar Henrique CominVessel SegmentationFundus Images

  30. Metric Surface Reconstruction of Neurosurgical Scenes from Monocular Operating Microscope Images and Microscope Pose

    Jul 24, 2026Thomas Bucher, Didier Neuenschwander, Thomas Petutschnigg +4Surface ReconstructionMicroscopy

  31. Frequency-Aware Dual-Stream Learning for Balanced Realism and Fidelity in Electron Microscopy Imaging

    Jul 24, 2026Longmi Gao, Zhengkai Zhao, Pan Gao +1MicroscopyImage Reconstruction

  32. Physics-Informed Deep Learning Model for Cross-Modality Super-Resolution in Fluorescence Microscopy

    Jul 23, 2026Mohammad Soltaninezhad, Elena Corbetta, Francisco Paez Larios +4Unpaired Image-To-Image TranslationMicroscopy

  33. TransBiolab: A Real-World Multi-View Dataset of Cluttered Transparent Biomedical Objects

    Jul 23, 2026Ke Ma, Yifei Wang, Meng Wang +1Large-Scale Robot Demonstration DatasetsMicroscopy

  34. SWITi: Quantifying and Reducing Tiling Artifacts with Sliding Window Inner Tiling

    Jul 21, 2026Federico Carrara, Aman Kukde, Melisande Croft +2Compression ArtifactsPixel-Level Prediction

  35. Video to All-in-focus Image Reconstruction Algorithm for Automated Microscopic Urinalysis

    Jul 15, 2026Chinmay Nema, Hari Om Aggrawal, Dipam Goswami +2MicroscopyImage Reconstruction

  36. NEEDL-Bench: Dataset for Swiss Needle Cast and Stomata Detection in Microscopy Images

    Jul 13, 2026Benjamin Blake, Declan McIntosh, Jürgen Ehlting +3Forest BiomassTomato Diseases

  37. HyperBank: A Differentiable Bank of Classical Priors for Few-Shot Spheroid Microscopy Segmentation

    Jul 12, 2026M. Průšek, A. Novozámský, F. Šroubek +3Few-Shot SegmentationMicroscopy

  38. The evolution of AI from image interpretation toward scientific inference in nanoparticle electron microscopy

    Jul 11, 2026Evropi Toulkeridou, Jiafei Li, Leonardo Lari +1Electron MicroscopyMicroscopy

  39. EMBRACE: A Multi-task Framework for Comprehensive Quality Assessment in Cleavage-stage Embryo

    Jul 11, 2026Anwar Hussain Sofi, Jung-Hua Wang, Ming-Jer Chen +4Mitotic FiguresMicroscopy

  40. Tracking Intermittent Particles with Self-Learned Visual Features

    Jul 10, 2026Raphael Reme, Victor Piriou, Alison Hanson +5Multi-Object TrackingMicroscopy

  41. ARGUS: Accelerated, Robust, General, and Unsupervised Cell Tracking Solutions

    Jul 9, 2026Noah Jaitner, Kandice Tanner, Ingolf Sack +1MicroscopyMulti-Object Tracking

  42. 3D Reconstruction of deciduous Trees using low-cost UAV- and Crane-based Photogrammetry for Monitoring Shoot Elongation across entire Canopies

    Jul 8, 2026Stephan Nebiker, Micha Tschanz, Nando Amport +1Forest BiomassCanopy

  43. From Closed-Loop Optimization to Open Decision Making: Coupled Digital Twins for Predictive and Autonomous Microscopy

    Jul 7, 2026Yu Liu, Boris Slautin, Ian Mercer +2Digital TwinsMicroscopy

  44. HASSL: Hierarchy-Aware Self-Supervised Learning Framework for Single Cell Microscopy

    Jul 5, 2026Julius Riel, Vishwa Mohan Singh, Sai Anirudh Aryasomayajula +10Self-Supervised LearningMicroscopy

  45. Cross-Subject Modeling for Widefield Calcium Imaging via Atlas-Aligned Spatiotemporal Tokenization

    Jul 5, 2026Mohammad Hosseini, Eray Erturk, Saba Hashemi +1Multimodal NeuroimagingControlled Comparison

  46. Plug-and-Play Volumetric Reconstruction for Compressive Sensing Light-Sheet Microscopy

    Jul 2, 2026Jianqing Jia, Yi Gong, Xinyuan Zhang +3Volumetric VideoImage Reconstruction

  47. SkelEM: Training-Signal Decoupling of Skeleton and Diffusion for Self-supervised Axial Super-Resolution in Volume Microscopy

    Jun 29, 2026Bohao Chen, Yanchao Zhang, Yanan Lv +3Generative Super-ResolutionMicroscopy

  48. SVC-Probe: A Framework for Evaluating Perturbation Generalization in Spatial Foundation-Model Embeddings

    Jun 26, 2026Jake Y. Chen, Huu Phong Nguyen, Fuad Al Abir +1Single-Cell Perturbation PredictionGeospatial Foundation Models

  49. A Zero-Shot Deep Image Prior Framework for Denoising and Deconvolution in Fluorescence Microscopy

    Jun 26, 2026Xiangyu Qian, Jing Liu, Yunqing Tang +2Microscopy

  50. 3D Masked Autoencoders are Robust Learners of Volumetric and Multimodal Cellular Representations for Microscopy

    Jun 22, 2026Amirhossein Kardoost, Lion Gleiter, Tingying Peng +13D Masked AutoencodersMicroscopy

  51. Benchmarking Vision-Language Models for Microscopic Plant Image Understanding

    Jun 21, 2026Tianqi Wei, Xin Yu, Zhi Chen +2MicroscopyMultimodal Benchmarks

  52. OSOG: A Differentiable, Physics-Informed Synthetic Data Engine for Micro-Optical Environments

    Jun 19, 2026Caio SilvaOpticalSynthetic-To-Real Domain Gap

  53. DART: A design-aware microfluidic chip paradigm for real-time live-cell image analysis

    Jun 16, 2026Johannes Seiffarth, Matthias Pesch, Lukas Scholtes +3MicroscopyFluid Controls

  54. Million-scale multimodal pollen microscopy with expert-guided foundation models

    Jun 16, 2026András Biricz, Björn Gedda, Donát Magyar +4MicroscopyFine-Grained Perception

  55. The Data Manifold under the Microscope

    Jun 14, 2026Marios Koulakis, Constantin SeiboldData ManifoldGeometric Deep Learning

  56. CD-RCM: Generalizable Continuous-Depth Novel View Synthesis for Reflectance Confocal Microscopy

    Jun 10, 2026Tooba Imtiaz, Milind Rajadhyaksha, Kivanc Kose +1MicroscopyNovel View Synthesis

  57. CellNet -- Localizing Cells using Sparse and Noisy Point Annotations

    Jun 10, 2026Benjamin Eckhardt, Dmytro Fishman, Stuart Fawke +3CellsMicroscopy