Retrieval-Augmented Generation

Predicting transcriptional responses to genetic perturbations is fundamental to functional genomics and therapeutic discovery. Recent deep learning models have shown promise in single-cell perturbation response prediction, but they typically generate each response in isolation, without explicitly leveraging related perturbations. We introduce PT-RAG (Perturbation-aware Two-stage Retrieval-Augmented Generation), a plug-in retrieval-and-conditioning module for generative cellular perturbation response. PT-RAG augments an existing perturbation-response backbone with learned access to related perturbation contexts. The key challenge is that relevance is not fixed in this setting: functionally related genes may elicit different effects across cell types. PT-RAG addresses this with a two-stage retrieval mechanism: GenePT-based semantic retrieval first identifies K candidate perturbations, after which a differentiable Gumbel-Softmax selector adaptively selects retrieved contexts conditioned on the control cell state, the query perturbation, and each candidate perturbation. We evaluate PT-RAG on two backbones, a STATE-style generator used as a frozen random reservoir and a fully trained scGPT, across cross-cell-type and cross-perturbation generalization tasks. PT-RAG consistently improves distributional similarity and often overall predictive quality; for example, on scGPT cross-cell-type results, the 2-Wasserstein distance drops by 5.9% relative to scGPT alone. The code to reproduce our experiments is available at https://github.com/difra100/PT-RAG_NIPS.

Despite the promise of Retrieval-Augmented Generation in grounding Multimodal Large Language Models with external knowledge, the transition to extensive contexts often leads to significant attention dilution and reasoning hallucinations. The surge in information density causes critical evidence to be submerged by voluminous noise, which complicates the discernment of relevant fragments within a dense input. In this paper, we propose Hit-RAG, a multi-stage preference alignment framework designed to resolve these cognitive bottlenecks through a progressive optimization pipeline. Our approach systematically refines the utilization of external evidence via three distinct stages. First, Supervised Fine-tuning establishes baseline context awareness to minimize information neglect. Next, Discriminative Preference Alignment enhances robustness against misleading distractors. Finally, Group-Relative Policy Optimization stabilizes logical synthesis to prevent reasoning collapse. Extensive evaluations on eight benchmarks demonstrate that Hit-RAG consistently yields substantial performance gains, enabling models to bridge the gap between context acquisition and accurate reasoning while surpassing much larger counterparts in long-context scenarios.

Large language models (LLMs) have shown remarkable capabilities in natural language processing tasks, yet their application in hardware security verification remains limited due to scarcity of publicly available hardware description language (HDL) datasets. This knowledge gap constrains LLM performance in detecting vulnerabilities within HDL designs. To address this challenge, we propose SecureRAG-RTL, a novel Retrieval-Augmented Generation (RAG)-based approach that significantly enhances LLM-based security verification of hardware designs. Our approach integrates domain-specific retrieval with generative reasoning, enabling models to overcome inherent limitations in hardware security expertise. We establish baseline vulnerability detection rates using prompt-only methods and then demonstrate that SecureRAG-RTL achieves substantial improvements across diverse LLM architectures, regardless of size. On average, our method increases detection accuracy by about 30%, highlighting its effectiveness in bridging domain knowledge gaps. For evaluation, we curated and annotated a benchmark dataset of 14 HDL designs containing real-world security vulnerabilities, which we will release publicly to support future research. These findings underscore the potential of RAG-driven augmentation to enable scalable, efficient, and accurate hardware security verification workflows.

Retrieval-augmented generation (RAG) for long-context question answering is bottlenecked by inference-time prefilling over large retrieved contexts. A common strategy is to precompute key-value (KV) caches for individual documents and selectively recompute a small subset of tokens to restore global causal dependencies, but existing methods rely on heuristics or representation discrepancies without modeling whether selected tokens can effectively influence generation. We cast selective KV recomputation as an information flow problem and show that a simple attention-norm signal from the query reliably identifies tokens that are both semantically relevant and structurally positioned to propagate information, when computed under an inference-consistent RoPE geometry. We therefore reconstruct global positional assignments for retrieved chunks and introduce an information-flow-guided chunk reordering strategy. Experiments on Large Language Model and Vision-Language Model benchmarks demonstrate consistent gains over prior methods under comparable latency.

Extracting insights from Electronic Health Record (EHR) databases often requires SQL expertise, creating a barrier for clinical decision-making and research. A promising approach is to use Large Language Models (LLMs) to translate natural language questions into SQL through Retrieval-Augmented Generation (RAG), where relevant question-SQL examples are retrieved to generate new queries via few-shot learning. However, adapting this method to the medical domain is non-trivial, as effective retrieval requires examples that align with both the logical structure of the question and its referenced entities (e.g., drug names, procedure titles). Standard single-step RAG struggles to optimize both aspects simultaneously and often relies on near-exact matches to generalize effectively. This issue is especially severe in healthcare, as questions often contain noisy and inconsistent medical jargon. To address this, we present CBR-to-SQL, a framework inspired by Case-based Reasoning theory that decomposes RAG's single-step retrieval into two explicit stages: one that focuses on retrieving structurally relevant examples, and one that aligns entities with the target database schema. Evaluated on two clinical benchmarks, CBR-to-SQL achieves competitive accuracies compared to fine-tuned methods. More importantly, it demonstrates considerably higher sample efficiency and robustness than the standard RAG approach, particularly under data scarcity and retrieval perturbations.

Diagnosing hepatic diseases accurately and interpretably is critical, yet it remains challenging in real-world clinical settings. Existing AI approaches for clinical diagnosis often lack transparency, structured reasoning, and deployability. Recent efforts have leveraged large language models (LLMs), retrieval-augmented generation (RAG), and multi-agent collaboration. However, these approaches typically retrieve evidence from a single source and fail to support iterative, role-specialized deliberation grounded in structured clinical data. To address this, we propose MedCoRAG (i.e., Medical Collaborative RAG), an end-to-end framework that generates diagnostic hypotheses from standardized abnormal findings and constructs a patient-specific evidence package by jointly retrieving and pruning UMLS knowledge graph paths and clinical guidelines. It then performs Multi-Agent Collaborative Reasoning: a Router Agent dynamically dispatches Specialist Agents based on case complexity; these agents iteratively reason over the evidence and trigger targeted re-retrievals when needed, while a Generalist Agent synthesizes all deliberations into a traceable consensus diagnosis that emulates multidisciplinary consultation. Experimental results on hepatic disease cases from MIMIC-IV show that MedCoRAG outperforms existing methods and closed-source models in both diagnostic performance and reasoning interpretability.

Retrieval augmented generation mitigates limitations of large language models in factual consistency and knowledge updating by introducing external knowledge. However, practical applications still suffer from semantic misalignment between retrieved results and generation objectives, as well as insufficient evidence utilization. To address these challenges, this paper proposes a retrieval augmented generation method that integrates semantic alignment with evidence constraints through coordinated modeling of retrieval and generation stages. The method first represents the relevance between queries and candidate evidence within a unified semantic space. This ensures that retrieved results remain semantically consistent with generation goals and reduces interference from noisy evidence and semantic drift. On this basis, an explicit evidence constraint mechanism is introduced. Retrieved evidence is transformed from an implicit context into a core control factor in generation. This restricts the expression scope of generated content and strengthens dependence on evidence. By jointly modeling semantic consistency and evidence constraints within a unified framework, the proposed approach improves factual reliability and verifiability while preserving natural language fluency. Comparative results show stable improvements across multiple generation quality metrics. This confirms the effectiveness and necessity of coordinated semantic alignment and evidence constraint modeling in retrieval augmented generation tasks.

3D scene graphs provide a structured representation of object entities and their relationships, enabling high-level interpretation and reasoning for robots while remaining intuitively understandable to humans. Existing approaches for 3D scene graph generation typically combine scene reconstruction with graph neural networks (GNNs). However, such pipelines require multi-modal data that may not always be available, and their reliance on heuristic graph construction can constrain the prediction of relationship triplets. In this work, we introduce a Scene Graph Retrieval-Reasoning Model in 3D (SGR3 Model), a training-free framework that leverages multi-modal large language models (MLLMs) with retrieval-augmented generation (RAG) for semantic scene graph generation. SGR3 Model bypasses the need for explicit 3D reconstruction. Instead, it enhances relational reasoning by incorporating semantically aligned scene graphs retrieved via a ColPali-style cross-modal framework. To improve retrieval robustness, we further introduce a weighted patch-level similarity selection mechanism that mitigates the negative impact of blurry or semantically uninformative regions. Experiments demonstrate that SGR3 Model achieves competitive performance compared to training-free baselines and on par with GNN-based expert models. Moreover, an ablation study on the retrieval module and knowledge base scale reveals that retrieved external information is explicitly integrated into the token generation process, rather than being implicitly internalized through abstraction.

Retrieval-augmented generation (RAG) is increasingly deployed in enterprise search and document-centric assistants, where responses must be grounded in long and complex source materials. In practice, verifying that generated answers faithfully reflect retrieved documents is difficult: large language models can check long contexts but are too slow and costly for interactive services, while lightweight classifiers operate within strict context limits and frequently miss evidence outside truncated passages. We present the design of a real-time verification component integrated into a production RAG pipeline that enables full-document grounding under latency constraints. The system processes documents up to 32K tokens and employs adaptive inference strategies to balance response time and verification coverage across workloads. We describe the architectural decisions, operational trade-offs, and evaluation methodology used to deploy the verifier, and show that full-context verification substantially improves detection of unsupported responses compared with truncated validation. Our experience highlights when long-context verification is necessary, why chunk-based checking often fails in real documents, and how latency budgets shape model design. These findings provide practical guidance for practitioners building reliable large-scale retrieval-augmented applications. (Model, benchmark, and code: https://huggingface.co/llm-semantic-router)

Vision-Language Navigation (VLN) is evolving from single-point pathfinding toward the more challenging Multi-Goal VLN. This task requires agents to accurately identify multiple entities while collaboratively reasoning over their spatial-physical constraints and sequential execution order. However, generic Retrieval-Augmented Generation (RAG) paradigms often suffer from spatial hallucinations and planning drift when handling multi-object associations due to the lack of explicit spatial modeling.To address these challenges, we propose RAGNav, a framework that bridges the gap between semantic reasoning and physical structure. The core of RAGNav is a Dual-Basis Memory system, which integrates a low-level topological map for maintaining physical connectivity with a high-level semantic forest for hierarchical environment abstraction. Building on this representation, the framework introduces an anchor-guided conditional retrieval and a topological neighbor score propagation mechanism. This approach facilitates the rapid screening of candidate targets and the elimination of semantic noise, while performing semantic calibration by leveraging the physical associations inherent in the topological neighborhood.This mechanism significantly enhances the capability of inter-target reachability reasoning and the efficiency of sequential planning. Experimental results demonstrate that RAGNav achieves state-of-the-art (SOTA) performance in complex multi-goal navigation tasks.

Automated question-answering (QA) systems increasingly rely on retrieval-augmented generation (RAG) to ground large language models (LLMs) in authoritative medical knowledge, ensuring clinical accuracy and patient safety in Artificial Intelligence (AI) applications for healthcare. Despite progress in RAG evaluation, current benchmarks focus only on simple multiple-choice QA tasks and employ metrics that poorly capture the semantic precision required for complex QA tasks. These approaches fail to diagnose whether an error stems from faulty retrieval or flawed generation, limiting developers from performing targeted improvement. To address this gap, we propose RAG-X, a diagnostic framework that evaluates the retriever and generator independently across a triad of QA tasks: information extraction, short-answer generation, and multiple-choice question (MCQ) answering. RAG-X introduces Context Utilization Efficiency (CUE) metrics to disaggregate system success into interpretable quadrants, isolating verified grounding from deceptive accuracy. Our experiments reveal an ``Accuracy Fallacy", where a 14% gap separates perceived system success from evidence-based grounding. By surfacing hidden failure modes, RAG-X offers the diagnostic transparency needed for safe and verifiable clinical RAG systems.

Automated industrial optimization modeling requires reliable translation of natural-language requirements into solver-executable code. However, large language models often generate non-compilable models due to missing declarations, type inconsistencies, and incomplete dependency contexts. We propose a type-aware retrieval-augmented generation (RAG) method that enforces modeling entity types and minimal dependency closure to ensure executability. Unlike existing RAG approaches that index unstructured text, our method constructs a domain-specific typed knowledge base by parsing heterogeneous sources, such as academic papers and solver code, into typed units and encoding their mathematical dependencies in a knowledge graph. Given a natural-language instruction, it performs hybrid retrieval and computes a minimal dependency-closed context, the smallest set of typed symbols required for solver-executable code, via dependency propagation over the graph. We validate the method on two constraint-intensive industrial cases: demand response optimization in battery production and flexible job shop scheduling. In the first case, our method generates an executable model incorporating demand-response incentives and load-reduction constraints, achieving peak shaving while preserving profitability; conventional RAG baselines fail. In the second case, it consistently produces compilable models that reach known optimal solutions, demonstrating robust cross-domain generalization; baselines fail entirely. Ablation studies confirm that enforcing type-aware dependency closure is essential for avoiding structural hallucinations and ensuring executability, addressing a critical barrier to deploying large language models in complex engineering optimization tasks.

Retrieval-augmented generation improves large language models' accuracy by adding relevant retrieved text to the prompt. Chunk level caching (CLC) accelerates inference by precomputing KV caches for these retrieved chunks and reusing them. However, these caches miss cross-attention dependencies between chunks, which can reduce output quality. Several methods try to improve CLC accuracy using different techniques. We make two main contributions. First, we show that existing CLC approaches have fundamental limitations that limit their accuracy or their applicability. We back this conclusion with an extensive CLC system experimental evaluation. Second, we observe that existing CLC techniques are complementary. We leverage this insight to propose a new CLC design that carefully combines them and achieves better accuracy.

Knowledge Tracing (KT) models students' evolving knowledge states to predict future performance, serving as a foundation for personalized education. While traditional deep learning models achieve high accuracy, they often lack interpretability. Large Language Models (LLMs) offer strong reasoning capabilities but struggle with limited context windows and hallucinations. Furthermore, existing LLM-based methods typically require expensive fine-tuning, limiting scalability and adaptability to new data. We propose MERIT (Memory-Enhanced Retrieval for Interpretable Knowledge Tracing), a training-free framework combining frozen LLM reasoning with structured pedagogical memory. Rather than updating parameters, MERIT transforms raw interaction logs into an interpretable memory bank. The framework uses semantic denoising to categorize students into latent cognitive schemas and constructs a paradigm bank where representative error patterns are analyzed offline to generate explicit Chain-of-Thought (CoT) rationales. During inference, a hierarchical routing mechanism retrieves relevant contexts, while a logic-augmented module applies semantic constraints to calibrate predictions. By grounding the LLM in interpretable memory, MERIT achieves state-of-the-art performance on real-world datasets without gradient updates. This approach reduces computational costs and supports dynamic knowledge updates, improving the accessibility and transparency of educational diagnosis.

Retrieval-Augmented Generation (RAG) systems commonly adopt retrieval fusion techniques such as multi-query retrieval and reciprocal rank fusion (RRF) to increase document recall, under the assumption that higher recall leads to better answer quality. While these methods show consistent gains in isolated retrieval benchmarks, their effectiveness under realistic production constraints remains underexplored. In this work, we evaluate retrieval fusion in a production-style RAG pipeline operating over an enterprise knowledge base, with fixed retrieval depth, re-ranking budgets, and latency constraints. Across multiple fusion configurations, we find that retrieval fusion does increase raw recall, but these gains are largely neutralized after re-ranking and truncation. In our setting, fusion variants fail to outperform single-query baselines on KB-level Top-$k$ accuracy, with Hit@10 decreasing from $0.51$ to $0.48$ in several configurations. Moreover, fusion introduces additional latency overhead due to query rewriting and larger candidate sets, without corresponding improvements in downstream effectiveness. Our analysis suggests that recall-oriented fusion techniques exhibit diminishing returns once realistic re-ranking limits and context budgets are applied. We conclude that retrieval-level improvements do not reliably translate into end-to-end gains in production RAG systems, and argue for evaluation frameworks that jointly consider retrieval quality, system efficiency, and downstream impact.

Despite the success of Retrieval-Augmented Generation (RAG) in grounding LLMs with external knowledge, its application over heterogeneous sources (e.g., private databases, global corpora, and APIs) remains a significant challenge. Existing approaches typically employ an LLM-as-a-Router to dispatch decomposed sub-queries to specific sources in a predictive manner. However, this "LLM-as-a-Router" strategy relies heavily on the semantic meaning of different data sources, often leading to routing errors when source boundaries are ambiguous. In this work, we introduce RealRoute System, a framework that shifts the paradigm from predictive routing to a robust Retrieve-then-Verify mechanism. RealRoute ensures evidence completeness through parallel, source-agnostic retrieval, followed by a dynamic verifier that cross-checks the results and synthesizes a factually grounded answer. Our demonstration allows users to visualize the real-time "re-routing" process and inspect the verification chain across multiple knowledge silos. Experiments show that RealRoute significantly outperforms predictive baselines in the multi-hop Rag reasoning task. The RealRoute system is released as an open-source toolkit with a user-friendly web interface. The code is available at the URL: https://github.com/Joseph1951210/RealRoute.

The nicotine addiction public health crisis continues to be pervasive. In this century alone, the tobacco industry has released and marketed new products in an aggressive effort to lure new and young customers for life. Such innovations and product development, namely flavored nicotine or tobacco such as nicotine pouches, have undone years of anti-tobacco campaign work. Past work is limited both in scope and in its ability to connect large-scale data points. Thus, we introduce the Nicotine Innovation Counter-Offensive (NICO) Dataset to provide public health researchers with over 200,000 multimodal samples, including images and text descriptions, on 55 tobacco and nicotine product brands. In addition, to provide public health researchers with factual connections across a large-scale dataset, we propose NICO-RAG, a retrieval-augmented generation (RAG) framework that can retrieve image features without incurring the high-cost of language models, as well as the added cost of processing image tokens with large-scale datasets such as NICO. At construction time, NICO-RAG organizes image- and text-extracted entities and relations into hypergraphs to produce as factual responses as possible. This joint multimodal knowledge representation enables NICO-RAG to retrieve images for query answering not only by visual similarity but also by the semantic similarity of image descriptions. Experimentals show that without needing to process additional tokens from images for over 100 questions, NICO-RAG performs comparably to the state-of-the-art RAG method adapted for images.

Retrieval-Augmented Generation (RAG) grounds large language models with external evidence, but many implementations rely on pre-built indices that remain static after construction. Related queries therefore repeat similar multi-hop traversal, increasing latency and compute. Motivated by schema-based learning in cognitive neuroscience, we propose GAM-RAG, a training-free framework that accumulates retrieval experience from recurring or related queries and updates retrieval memory over time. GAM-RAG builds a lightweight, relation-free hierarchical index whose links capture potential co-occurrence rather than fixed semantic relations. During inference, successful retrieval episodes provide sentence-level feedback, updating sentence memories so evidence useful for similar reasoning types becomes easier to activate later. To balance stability and adaptability under noisy feedback, we introduce an uncertainty-aware, Kalman-inspired gain rule that jointly updates memory states and perplexity-based uncertainty estimates. It applies fast updates for reliable novel signals and conservative refinement for stable or noisy memories. We provide a theoretical analysis of the update dynamics, and empirically show that GAM-RAG improves average performance by 3.95% over the strongest baseline and by 8.19% with 5-turn memory, while reducing inference cost by 61%. Our code and datasets are available at: https://anonymous.4open.science/r/GAM_RAG-2EF6.

Recent literature highlights the potential of graph-based approaches within large language model (LLM) retrieval-augmented generation (RAG) pipelines for answering queries of varying complexity, particularly those that fall outside the LLM's prior knowledge. However, LLMs are prone to hallucination and often face technical limitations in handling contexts large enough to ground complex queries effectively. To address these challenges, we propose a novel iterative, feedback-driven GraphRAG architecture that leverages response quality assessment to iteratively refine outputs until a sound, well-grounded response is produced. Evaluating our approach with queries from the HotPotQA dataset, we demonstrate that this iterative RAG strategy yields responses with higher semantic quality and improved relevance compared to a single-shot baseline.

We introduce Legal RAG Bench, a benchmark and evaluation methodology for assessing the end-to-end performance of legal RAG systems. As a benchmark, Legal RAG Bench consists of 4,876 passages from the Victorian Criminal Charge Book alongside 100 complex, hand-crafted questions demanding expert knowledge of criminal law and procedure. Both long-form answers and supporting passages are provided. As an evaluation methodology, Legal RAG Bench leverages a full factorial design and novel hierarchical error decomposition framework, enabling apples-to-apples comparisons of the contributions of retrieval and reasoning models in RAG. We evaluate three state-of-the-art embedding models (Isaacus' Kanon 2 Embedder, Google's Gemini Embedding 001, and OpenAI's Text Embedding 3 Large) and two frontier LLMs (Gemini 3.1 Pro and GPT-5.2), finding that information retrieval is the primary driver of legal RAG performance, with LLMs exerting a more moderate effect on correctness and groundedness. Kanon 2 Embedder, in particular, had the largest positive impact on performance, improving average correctness by 17.5 points, groundedness by 4.5 points, and retrieval accuracy by 34 points. We observe that many errors attributed to hallucinations in legal RAG systems are in fact triggered by retrieval failures, concluding that retrieval sets the ceiling for the performance of many modern legal RAG systems. We document why and how we built Legal RAG Bench alongside the results of our evaluations. We also openly release our code and data to assist with reproduction of our findings.

Retrieval-Augmented Generation (RAG) has emerged as a widely adopted approach for enhancing LLMs in scenarios that demand extensive factual knowledge. However, current RAG evaluations concentrate primarily on correctness, which may not fully capture the impact of retrieval on LLM uncertainty and reliability. To bridge this gap, we introduce URAG, a comprehensive benchmark designed to assess the uncertainty of RAG systems across various fields like healthcare, programming, science, math, and general text. By reformulating open-ended generation tasks into multiple-choice question answering, URAG allows for principled uncertainty quantification via conformal prediction. We apply the evaluation pipeline to 8 standard RAG methods, measuring their performance through both accuracy and prediction-set sizes based on LAC and APS metrics. Our analysis shows that (1) accuracy gains often coincide with reduced uncertainty, but this relationship breaks under retrieval noise; (2) simple modular RAG methods tend to offer better accuracy-uncertainty trade-offs than more complex reasoning pipelines; and (3) no single RAG approach is universally reliable across domains. We further show that (4) retrieval depth, parametric knowledge dependence, and exposure to confidence cues can amplify confident errors and hallucinations. Ultimately, URAG establishes a systematic benchmark for analyzing and enhancing the trustworthiness of retrieval-augmented systems. Our code is available on GitHub.

Large Language Models (LLMs) have demonstrated remarkable human-like capabilities, yet their ability to replicate a specific individual remains under-explored. This paper presents a case study to investigate LLM-based individual simulation with a volunteer-contributed archive of private messaging history spanning over ten years. Based on the messaging data, we propose the "Individual Turing Test" to evaluate whether acquaintances of the volunteer can correctly identify which response in a multi-candidate pool most plausibly comes from the volunteer. We investigate prevalent LLM-based individual simulation approaches including: fine-tuning, retrieval-augmented generation (RAG), memory-based approach, and hybrid methods that integrate fine-tuning and RAG or memory. Empirical results show that current LLM-based simulation methods do not pass the Individual Turing Test, but they perform substantially better when the same test is conducted on strangers to the target individual. Additionally, while fine-tuning improves the simulation in daily chats representing the language style of the individual, retrieval-augmented and memory-based approaches demonstrate stronger performance on questions involving personal opinions and preferences. These findings reveal a fundamental trade-off between parametric and non-parametric approaches to individual simulation with LLMs when given a longitudinal context.

To advance foundation Large Language Models (LLMs) for combustion science, this study presents the first end-to-end framework for developing domain-specialized models for the combustion community. The framework comprises an AI-ready multimodal knowledge base at the 3.5 billion-token scale, extracted from over 200,000 peer-reviewed articles, 8,000 theses and dissertations, and approximately 400,000 lines of combustion CFD code; a rigorous and largely automated evaluation benchmark (CombustionQA, 436 questions across eight subfields); and a three-stage knowledge-injection pathway that progresses from lightweight retrieval-augmented generation (RAG) to knowledge-graph-enhanced retrieval and continued pretraining. We first quantitatively validate Stage 1 (naive RAG) and find a hard ceiling: standard RAG accuracy peaks at 60%, far surpassing zero-shot performance (23%) yet well below the theoretical upper bound (87%). We further demonstrate that this stage's performance is severely constrained by context contamination. Consequently, building a domain foundation model requires structured knowledge graphs and continued pretraining (Stages 2 and 3).

Accurate prediction of surgical duration is pivotal for hospital resource management. Although recent supervised learning approaches-from machine learning (ML) to fine-tuned large language models (LLMs)-have shown strong performance, they remain constrained by the need for high-quality labeled data and computationally intensive training. In contrast, zero-shot LLM inference offers a promising training-free alternative but it lacks grounding in institution-specific clinical context (e.g., local demographics and case-mix distributions), making its predictions clinically misaligned and prone to instability. To address these limitations, we present PREBA, a retrieval-augmented framework that integrates PCA-weighted retrieval and Bayesian averaging aggregation to ground LLM predictions in institution-specific clinical evidence and statistical priors. The core of PREBA is to construct an evidence-based prompt for the LLM, comprising (1) the most clinically similar historical surgical cases and (2) clinical statistical priors. To achieve this, PREBA first encodes heterogeneous clinical features into a unified representation space enabling systematic retrieval. It then performs PCA-weighted retrieval to identify clinically relevant historical cases, which form the evidence context supplied to the LLM. Finally, PREBA applies Bayesian averaging to fuse multi-round LLM predictions with population-level statistical priors, yielding calibrated and clinically plausible duration estimates. We evaluate PREBA on two real-world clinical datasets using three state-of-the-art LLMs, including Qwen3, DeepSeek-R1, and HuatuoGPT-o1. PREBA significantly improves performance-for instance, reducing MAE by up to 40% and raising R^2 from -0.13 to 0.62 over zero-shot inference-and it achieves accuracy competitive with supervised ML methods, demonstrating strong effectiveness and generalization.

In UAV dynamic decision, complex and variable hazardous factors pose severe challenges to the generalization capability of algorithms. Despite offering semantic understanding and scene generalization, Large Language Models (LLM) lack domain-specific UAV control knowledge and formal safety assurances, restricting their direct applicability. To bridge this gap, this paper proposes a train-free two-layer decision architecture based on LLMs, integrating high-level safety planning with low-level precise control. The framework introduces three key contributions: 1) A fuzzy Control Barrier Function verification mechanism for semantically-augmented actions, providing provable safety certification for LLM outputs. 2) A star-hierarchical graph-based retrieval-augmented generation system, enabling efficient, elastic, and interpretable scene adaptation. 3) Systematic experimental validation in pursuit-evasion scenarios with unknown obstacles and emergent threats, demonstrating that our SAGE-LLM maintains performance while significantly enhancing safety and generalization without online training. The proposed framework demonstrates strong extensibility, suggesting its potential for generalization to broader embodied intelligence systems and safety-critical control domains.

We present MTRAG-UN, a benchmark for exploring open challenges in multi-turn retrieval augmented generation, a popular use of large language models. We release a benchmark of 666 tasks containing over 2,800 conversation turns across 6 domains with accompanying corpora. Our experiments show that retrieval and generation models continue to struggle on conversations with UNanswerable, UNderspecified, and NONstandalone questions and UNclear responses. Our benchmark is available at https://github.com/IBM/mt-rag-benchmark

Industrial advertising question answering (QA) is a high-stakes task in which hallucinated content, particularly fabricated URLs, can lead to financial loss, compliance violations, and legal risk. Although Retrieval-Augmented Generation (RAG) is widely adopted, deploying it in production remains challenging because industrial knowledge is inherently relational, frequently updated, and insufficiently aligned with generation objectives. We propose a reinforced co-adaptation framework that jointly optimizes retrieval and generation through two components: (1) Graph-aware Retrieval (GraphRAG), which models entity-relation structure over a high-citation knowledge subgraph for multi-hop, domain-specific evidence selection; and (2) evidence-constrained reinforcement learning via Group Relative Policy Optimization (GRPO) with multi-dimensional rewards covering faithfulness, style compliance, safety, and URL validity. Experiments on an internal advertising QA dataset show consistent gains across expert-judged dimensions including accuracy, completeness, and safety, while reducing the hallucination rate by 72%. A two-week online A/B test demonstrates a 28.6% increase in like rate, a 46.2% decrease in dislike rate, and a 92.7% reduction in URL hallucination. The system has been running in production for over half a year and has served millions of QA interactions.

Public service information systems are often fragmented, inconsistently formatted, and outdated. These characteristics create low-resource retrieval environments that hinder timely access to critical services. We investigate retrieval challenges in such settings through the domain of food pantry access, a socially urgent problem given persistent food insecurity. We develop an AI-powered conversational retrieval system that scrapes and indexes publicly available pantry data and employs a Retrieval-Augmented Generation (RAG) pipeline to support natural language queries via a web interface. We conduct a pilot evaluation study using community-sourced queries to examine system behavior in realistic scenarios. Our analysis reveals key limitations in retrieval robustness, handling underspecified queries, and grounding over inconsistent knowledge bases. This ongoing work exposes fundamental IR challenges in low-resource environments and motivates future research on robust conversational retrieval to improve access to critical public resources.

This paper presents the award-winning RMIT-ADM+S system for the Text-to-Text track of the NeurIPS2025 MMU-RAG Competition. We introduce Routing-to-RAG (R2RAG), a research-focused retrieval-augmented generation (RAG) architecture composed of lightweight components that dynamically adapt the retrieval strategy based on inferred query complexity and evidence sufficiency. The system uses smaller LLMs, enabling operation on a single consumer-grade GPU while supporting complex research tasks. It builds on the G-RAG system, winner of the ACMSIGIR~2025 LiveRAG Challenge, and extends it with modules informed by qualitative review of outputs. R2RAG won the Best Dynamic Evaluation award in the Open Source category, demonstrating high effectiveness with careful design and efficient use of resources.

We present DynaRAG, a retrieval-augmented generation (RAG) framework designed to handle both static and time-sensitive information needs through dynamic knowledge integration. Unlike traditional RAG pipelines that rely solely on static corpora, DynaRAG selectively invokes external APIs when retrieved documents are insufficient for answering a query. The system employs an LLM-based reranker to assess document relevance, a sufficiency classifier to determine when fallback is necessary, and Gorilla v2 -- a state-of-the-art API calling model -- for accurate tool invocation. We further enhance robustness by incorporating schema filtering via FAISS to guide API selection. Evaluations on the CRAG benchmark demonstrate that DynaRAG significantly improves accuracy on dynamic questions, while also reducing hallucinations. Our results highlight the importance of dynamic-aware routing and selective tool use in building reliable, real-world question-answering systems.