Tabular Foundation Models

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Period ending 2026-09-21

5 new papers

A weekly snapshot of new work published in Tabular Foundation Models.

Period ending 2026-09-14

2 new papers

A weekly snapshot of new work published in Tabular Foundation Models.

Period ending 2026-09-07

3 new papers

A weekly snapshot of new work published in Tabular Foundation Models.

87 papers

Latest in Tabular Foundation Models

Sep 22, 2026cs.LG

A JEPA Recipe for Tabular Foundation Models

Tabular foundation models learn to predict cell values in context, whereas world-model self-supervision asks for prediction in representation space (LeCun, 2022; Assran et al., 2023). On a tabular foundation-model prior, the latent term of a joint-embedding predictive architecture (JEPA) collapsed in our earlier runs and took the encoder with it to a constant map. We report a recipe under which the latent term survives to convergence beside the value objective: the value head reads the encoder field rather than the predictor, and the target is an exponential moving average (EMA) difference. To bound its cost against the value-only arm, both arms train until a plateau rule stops them, with no fixed step budget. A fixed horizon had confounded a slowdown with a ceiling, since the value-only arm was still improving well past the usual budget. At convergence, in one run per arm, the JEPA arm trails the value-only arm across 147 real datasets, 32:70 wins to losses on classification (29:63 with one entry per dataset name) and 8:24 on regression, the margin small on classification and wider on regression, and the count leans the same way in each stratum and each benchmark. The JEPA arm (jepa) needs 1.42 times as many steps as the value-only arm (ds), and 1.66 times its wall-clock, to reach its plateau.
Mingyu Jeon, Suwan Cho, Jae Young Suh
Sep 16, 2026cs.NE

Benchmarking Tabular Foundation Models as Surrogates in Expensive Evolutionary Optimization

Surrogate-assisted evolutionary algorithms (SAEAs) are effective methods for solving expensive optimization problems (EOPs), where surrogate models replace most expensive evaluations and critically influence the final optimization results. In recent years, tabular foundation models have advanced rapidly, and the Tabular Prior-data Fitted Network (TabPFN) has been adopted as a surrogate model for EOPs due to its strong predictive capability, demonstrating promising performance. Motivated by its potential as a surrogate model in SAEAs, this work conducts a comprehensive study that combines extensive experiments with in-depth theoretical analysis to investigate the effectiveness of TabPFN. Specifically, we perform experiments across both offline and online SAEA settings, covering diverse problem scenarios such as single-objective, multi-objective, constrained, combinatorial, mixed-variable, and engineering optimization problems. In addition, we further analyze the advantages and limitations of TabPFN within SAEAs and provide practical guidelines for its application in different optimization settings. Results show that the effectiveness of TabPFN is highly problem dependent, and it cannot replace conventional surrogates universally. Overall, TabPFN should be adopted selectively according to data availability, landscape complexity, search space characteristics, and its role within the algorithm. Customized model management strategies and role-specific algorithm design are necessary to fully exploit its advantages and avoid its pitfalls.
Lu Han, Jin Wang, Yuchen Li +5
Sep 15, 2026cs.LG

TabPFN-3.5: Technical Report

We introduce TabPFN-3.5, our new flagship Tabular Foundation Model. It significantly outperforms its predecessor, TabPFN-3, and all existing baselines across a broad range of tabular problems. TabPFN-3.5 sets a new state of the art on standard tabular prediction in TabArena, and extends it to the data practitioners encounter in practice: non-i.i.d. data with temporal or grouped splits, tables with strings, text and images, high-cardinality categorical features, and wide tables with many features. These gains carry over to our task-specific harnesses: state of the art on relational data and stronger time-series forecasting. For faster inference, our variant TabPFN-3.5-Fast runs up to 3x faster than TabPFN-3 while keeping most of the accuracy gains. In addition, we upgrade TabPFN-3.5-Plus, expanding our multimodal capabilities with advanced text and date handling alongside proprietary inference optimizations. Finally, we release a new version of our Thinking mode, TabPFN-3.5-Thinking, which scales inference-time computation to push the state of the art further. It benefits from our stronger base model and from inference-time improvements that make it up to 12x faster than TabPFN-3-Thinking.
Benjamin Jäger, Nick Erickson, Léo Grinsztajn +44
Sep 14, 2026cs.LG

Distilling Foundation Models for Agentic What-If Reasoning:Cost, Latency, and Governance in a Hybrid LLM+SLM Architecture

Tabular foundation models deliver strong zero-training predictive performance via in-context learning, but their high inference latency makes them impractical as hot-path decision backends in interactive agentic loops. We distill a TabPFN teacher into a compact feed-forward student across a business-decision simulation on UCI Adult and five OpenML benchmarks: the classification head compresses 53.2M parameters to 8,546 (6,220x); the deployed two-head loan pipeline compresses 111.4M parameters to 17,059 (6,532x). The student retains 95.4-100.5% accuracy and 96.8-100.0% AUC, with the lowest accuracy retention on credit-g at 95.4%; an alpha = 0 hard-label control shows that the teacher's soft targets provide a 2.1-7.0 AUC point gain.
Sourish Dey, Aditya Kumar
Sep 14, 2026stat.ME

The Anatomy and Boundary of Adaptation under Temporal Tabular Shift

Prequential adaptation of frozen tabular foundation models under temporal drift, with each label revealed only after prediction, helps some deployments and harms others, yet current practice does not predict which. We study the sources and limits of these gains. A diagnostic anatomy attributes gains to four recurring mechanisms under a streaming protocol that removes three optimistic biases and quantifies a fourth. Within an agnostic total-variation drift class, the target conditional is only partially identified: its identified-set diameter, the \emph{wall}, is irreducible from unlabeled data uniformly in sample size. A second, orthogonal L2L^2 projection wall quantifies what the frozen representation cannot express. Two canonical mechanism priors collapse the first wall. Under stated nuisance-rate conditions, the wall can be estimated from labeled historical windows at a N\sqrt N rate above the margin threshold γ=d0/(2αs)\gamma^\star=d_0/(2\alpha_s). At γ=0\gamma=0, the conditional lower-bound program depends on an open affinity estimate; the positive-margin lower branch also remains open. Semi-synthetic data illustrate the finite-sample mechanism with calibrated exponents. Stream-level proxies on eight industrial streams fall on the difficult side under a stated roughness bound, while the equality case γ=γ\gamma=\gamma^\star remains unresolved.
Tianyu Wang, Xi Vincent Wang, Lihui Wang +2
Sep 14, 2026cs.LG

Attention Quantization for Tabular Foundation Models

With the recent rise and adoption of tabular foundation models, optimizing their inference performance becomes an emerging field for efficiency research. While the models are architecturally similar to transformer-based large language models (LLMs), the size and serving patterns differ significantly. We show that the focus should be on the attention calculation and less on weight or KV cache quantization, which are more popular in LLMs. We develop a quantization strategy for queries, keys, and values to FP8 and use explicit FP8 matrix multiplication instructions to speed up the attention calculation. We find that it is crucial to align the quantization error in the test rows with the quantization error in the training rows, as otherwise the accuracy drops drastically. Our Triton kernel achieves a speedup up to 1.7x over regular 16-bit kernels, and we show that on TabPFN-v3 and TabICLv2 there is no relevant accuracy loss across TabArena and BeyondArena.
Jonas M. Kübler, Benjamin Jäger, Klemens Flöge +2
Sep 11, 2026cs.CL

Target leakage, not model class, explains reported accuracy in survey-based cardiovascular screening: a leakage-tiered audit of glass-box and tabular foundation models

Cardiovascular screening models trained on national health surveys routinely report areas under the receiver operating characteristic curve (AUROC) near 0.89. We asked whether that accuracy reflects learning or target leakage, whether tabular foundation models change the answer, and whether the properties deployment requires survive joint examination. We benchmarked ten classifiers spanning linear, tree-ensemble, neural, glass-box, and tabular foundation classes for prevalent myocardial infarction in 442,067 respondents of the 2022 Behavioral Risk Factor Surveillance System across five feature tiers of decreasing leakage risk. Each was audited for discrimination, calibration, fairness at an explicit screening threshold, conformal coverage, explanation faithfulness, and inference cost, then applied -- models and thresholds frozen -- to 430,755 respondents of 2023. Removing two post-diagnostic features cost every model 0.049-0.051 AUROC, collapsing the field into a 0.0045-wide band. The glass-box explainable boosting machine was non-inferior to every alternative within a pre-specified 0.005 margin while scoring the cohort roughly 104 times faster than the strongest foundation model. One threshold detected 75.4% of women's infarctions against 89.0% of men's; editing the model's shape functions reduced the gap to 0.010. Marginal conformal prediction gave 0.86 coverage to men and 0.82 to adults over 60; Mondrian calibration repaired every stratum. Frozen models transported within 0.002 AUROC. Reported headroom in this literature is a property of the feature set, not the learner. Transparency cost nothing measurable and made fairness repair and uncertainty conditioning directly auditable. Evaluation practice, not model capacity, is the binding constraint.
Raad Bin Tareaf, Murad Al-Rajab, Samia Loucif +2
Sep 7, 2026cs.LG

Streaming Hierarchical Inference with Tabular Foundation Models

Tabular Foundation Models (TFMs) have recently demonstrated strong predictive performance through in-context learning, but their deployment in high-throughput data streams remains challenging due to communication overhead and latency. We propose \textit{HINT}, a hierarchical inference framework that combines edge-based retrieval with cloud-based TFM inference. A graph-based approximate nearest neighbor memory maintained over a sliding window provides local predictions and uncertainty estimates, allowing confident samples to be processed locally while uncertain instances are selectively offloaded, together with their retrieved context, to a cloud-hosted TFM. The framework exposes an offloading threshold and a neighborhood retrieval policy that can be varied to balance predictive performance and communication cost. Experiments show \textit{HINT} consistently identifies favorable trade-offs.
Vitor Crista, Afonso Lourenço, Diogo Martinho +1
Sep 3, 2026cs.AI

Xiaomi-TabLDM: A Tabular Foundation Model Technical Report

We introduce Xiaomi-TabLDM, a tabular large data foundation model for classification and regression via in-context learning, which delivers superior prediction accuracy without requiring task-specific fine-tuning. Pretrained exclusively on synthetic data generated from structural causal models (SCMs), our model enables more flexible context utilization and more efficient capacity scaling. i) A new performance standard. Strong regression performance across benchmarks: Xiaomi-TabLDM ranks 1st on OpenML-CTR23 and 2nd on regression across TALENT, TabArena, and BCCO, demonstrating consistently strong regression performance across four complementary benchmark suites. Favorable performance--efficiency trade-off: Xiaomi-TabLDM combines strong predictive performance with substantially lower computational cost. For example, on TabArena regression, it achieves the second-highest Elo while using 82% less training time and 68% less prediction time than the top-ranked TabFM. ii) Large-scale synthetic pretraining. Xiaomi-TabLDM expands the coverage and diversity of synthetic tabular data used for pretraining. We also adopt a three-stage training strategy together with dual-stream feature grouping, lightweight Attention Residual, and sparse Mixture-of-Experts, enabling Xiaomi-TabLDM to learn richer feature interactions and expert specialization across diverse tabular tasks. iii) Test-time scaling. Xiaomi-TabLDM further extends tabular prediction through test-time compute scaling, where allocating additional computation at inference time consistently improves predictive performance over the base model.
Xiaomi-TabLDM Team, :, Penghui Wang +10
Aug 31, 2026cs.LG

Context Window Failures in Relational Foundation Models

Recent Relational Deep Learning architectures have been proposed as foundation models for multi-table relational data, yet they impose constrained neighborhood budgets that force row truncation when an entity has many related records. We introduce Animus, a synthetic financial dataset in which predicting customer income requires aggregating up to tens of thousands of transactions. On the raw representation, three recently proposed models (RT, Griffin, RelGT) achieve R20.18R^2 \le 0.18; a single, routine, temporal pre-aggregation step recovers R2R^2 up to 0.650.65. This questions whether current relational foundation models are ready for high-cardinality real-world data.
Denis Oliveira Correa, Francisco Galuppo Azevedo
Aug 31, 2026cs.LG

TSPFN: A Temporal Tabular Foundation Model for Physiological Time Series Classification

Designing models that generalize effectively in low- to medium-data regimes remains a primary challenge in medical machine learning, particularly for physiological time-series classification. While tabular foundation models such as TabPFN offer an attractive alternative to conventional fine-tuning through in-context learning, they are not designed to capture the temporal dependencies inherent to physiological signals. ~In this paper, we introduce TSPFN, a foundation model that redesigns TabPFN's architecture for time series data. TSPFN integrates structured temporal representations and positional embeddings to capture intra-sample temporal and channel dependencies. To fully leverage its spatio-temporal design, the model is pretrained on 140,000 real-world physiological time series across multiple medical domains. This yields a unified, generalizable framework capable of learning the specificities of medical time series. Experiments across diverse physiological benchmarks demonstrate that TSPFN consistently outperforms standard tabular baselines and TabPFN, and achieves superior cross-domain generalization compared to specialized deep time-series models. All our experiments, ablation studies, and pre-processing scheme are publicly available at https://github.com/Jeremstym/TSPFN
Jérémie Stym-Popper, Clément Rambour, Federica Granese +2
Aug 13, 2026cs.LG

Balanced Adaptive Prototype Selection for Scalable TabPFN Inference on Large-Scale Tabular Data

Pretrained tabular foundation models have demonstrated strong predictive capability; however, their application to large-scale datasets remains constrained by the limited inference context. This paper introduces Balanced Adaptive Prototype Selection (BAPS), a framework for constructing compact, information-preserving contexts for scalable TabPFN inference. Without modifying or retraining the pretrained model, BAPS jointly preserves representative structure, informative decision boundaries, local density, class balance, and feature-space diversity. Experiments on the million-row HIGGS and SUSY datasets show that 512 prototypes retain strong predictive performance and reliable calibration, corresponding to an approximately 1,953-fold context compression. All experiments were conducted on an Intel Core i7 CPU with 16 GB RAM and no GPU acceleration. These findings establish effective context construction as a practical mechanism for extending pretrained tabular foundation models to million-scale datasets.
Mahboobe Jadid, Melika Rezaye Garkani, Ali Mousavi
Aug 11, 2026cs.LG

TACTICL: Task-Aware Compression of Tabular ICL Models

The strong performance of foundation models for tabular tasks comes at substantial inference costs. Distilling models into task-specific architectures reduces model size and computational demands but also sacrifices in-context adaptability. Here we introduce TACTICL, an automated task-aware compression framework for tabular in-context learning models that jointly prunes transformer layers and replaces them with lightweight adapters trained on downstream tasks, thus blending in-context with in-weight learning. We study TACTICL on 47 benchmark datasets and show that we can substitute up to 85% of layers without substantial performance drop on a given downstream task. We further show that TACTICL maintains robustness to data shifts, leaving its in-context ability intact. Overall, TACTICL provides a robust framework for exploiting the depth-wise redundancy of tabular foundation models by combining task-specific adaptation and structured compression. We provide the code at: https://github.com/Hebog/tfm_compression
Mykhailo Koshil, Matthias Feurer, Katharina Eggensperger
Aug 6, 2026cs.LG

Bootstrap-Conditioned Action Selection with Tabular Foundation Models

Contextual bandits offer a natural framework for sample-efficient personalization, but practical deployment remains difficult under sparse, biased interaction data, unreliable uncertainty estimates, and severe cold starts. We study whether pre-trained tabular foundation models with in-context learning can be turned into randomized policies for online decision making. We propose BC-ICL (Bootstrap-conditioned action selection using ICL), which at each round draws a bootstrap resample of the interaction history, conditions a frozen pre-trained ICL model on that resample, scores all actions, and selects the action with the highest sampled score. We further introduce an arm-context conditioning architecture that promotes shared statistical strength across actions and helps avoid common bootstrap failure modes of isolated-arm bandits. Empirically, this policy delivers strong early-round regret and regret performance on standard contextual bandit suites, outperforming established baselines under a strict online protocol.
Devansh Gupta, Shiv Tavker, Dmitry Efimov +3
Aug 6, 2026cs.LG

SkillTFM: Gated Skill Evolution for Training-Free Adaptation of Tabular Foundation Models

Tabular data are ubiquitous in real-world applications and are crucial for data-driven prediction and decision-making across science, industry, finance, healthcare, and public services. Tabular foundation models (TFMs) have emerged as a promising paradigm for general-purpose tabular learning, offering reusable predictors across diverse datasets and substantially reducing the need for task-specific training, tuning, and model development. However, their practical deployment remains constrained by distribution shifts, heterogeneous feature semantics, and task-specific patterns that are difficult to capture without costly fine-tuning or additional labeled data. To this end, we propose SkillTFM, a training-free system that shifts TFM adaptation from parameter updates to the gated evolution of agentic skills. The core of SkillTFM is a verifiable and extensible skill bank that couples boundary evidence identification with gated skill evolution: the former characterizes task structure and base-model failure patterns, whereas the latter retrieves and extends reusable skills subject to explicit validation. Across simulated boundary settings and real-world electricity-price forecasting, SkillTFM improves AUC by 0.128--0.142, raises nonlinear-boundary AUC from 0.699 to 0.898. Furthermore, experiments across TFM backbones demonstrate the effectiveness and generality of SkillTFM.
Yi He, Zhengkang Guan, Anpeng Wu +3
Aug 6, 2026cs.LG

Do Tabular Foundation Models Agree with Themselves?

Tabular Foundation Models (TFMs) are currently the best approach to tabular prediction problems. They are constructed as transformers that approximate the Bayesian posterior predictive distribution based on a pre-training prior. These univariate predictors can be converted into multivariate ones autoregressively by sampling one target and adding it to the features. However, the faithfulness of the resulting joint has not been investigated. Furthermore, TFMs cannot be evaluated against the posterior itself, at least not on real-world datasets, because the ground-truth distribution is unknown. We therefore propose asking a different question: could a model's predictions result from any joint distribution? To answer this question, we pose two requirements that any such model must satisfy. The first is marginalization consistency, which demands that marginalized conditionals are equal to directly predicted marginals. The second is factorization consistency, which demands that different factorization orders result in equal joint distributions. Every TFM that we evaluate violates both of these requirements for both classification and regression across all datasets.
Christian Klötergens, Vijaya Krishna Yalavarthi, Lars Schmidt-Thieme +1
Aug 2, 2026cs.LG

TabDPT-Turbo: Efficient In-Context Learning for Tabular Prediction

Tabular foundation models, driven by in-context learning, have rapidly grown in quality and popularity. However, recent approaches with either cell-based architectures or retrieval have sacrificed efficiency for raw performance, restricting their utility in situations where compute is limited or inference speed is crucial. We adopt an alternate approach, sticking with row-based attention while incorporating long context pre-training to eliminate the need for retrieval. By combining this with architectural improvements and SSL pre-training on a newly-sourced, larger corpus of real data results, we present TabDPT-Turbo, a model that provides comparable default performance to TabDPT v1.1 on TabArena-Lite, CC18, and CTR23, at orders of magnitude faster. In our experiments, TabDPT-Turbo is the fastest model overall among leading foundation models. We have released the new model as TabDPT v1.2 at https://github.com/layer6ai-labs/TabDPT-inference.
Rasa Hosseinzadeh, Alex Labach, Zexin Xue +3
Aug 1, 2026cs.LG

From field-scale to large-scale spectral libraries: Tabular foundation models in soil spectroscopy

Visible and near-infrared (vis-NIR) and mid-infrared (MIR) spectroscopy enable rapid, cost-effective prediction of soil properties. Yet, translating high-dimensional, highly collinear spectra into accurate soil property predictions remains challenging, particularly when employing machine learning. We systematically investigated regression models and dimensionality reduction approaches for spectroscopic modeling across 85 regression tasks from open benchmark datasets in pedometrics spanning field-scale digital soil mapping and a global soil spectral library. We compared an in-context learning tabular foundation model (TabPFN), a convolutional neural network (CNN), rule-based regression (Cubist), Random Forest, and partial least squares regression (PLSR) using full spectra as well as features derived from principal component analysis (PCA) and partial least squares (PLS) latent variables. TabPFN consistently delivered the best overall performance across scales, including large spectral library tasks with tens of thousands of soil samples. Notably, TabPFN applied directly to full spectra already surpassed all classical baselines, showing that explicit dimensionality reduction is not strictly required for strong performance. Further improvements were achieved through PLS, which proved to be an effective dimensionality reduction strategy for all models. Combining PLS latent variables with TabPFN yielded the best predictions overall. Our findings provide evidence-based guidance for spectroscopic calibration model selection across operational scales, demonstrating that the long-standing advantages of PLSR and modern tabular foundation models complement each other in chemometrics.
Viacheslav Barkov, Jonas Schmidinger, Robin Gebbers +1
Jul 30, 2026cs.LG

Memory Efficient Tabular Foundation Models

Tabular Foundation Models, such as TabPFN, have received a large amount of recent attention due to their performance on in-context tabular machine learning tasks, which often exceeds classical baselines. However, practical deployment considerations of these models has received less attention. In this paper we investigate the memory requirements for these models. We demonstrate that employing model compression approaches can enable memory reductions of up to 7.6 with similar levels of performance, reducing deployment requirements by nearly 87%. Our work provides insight to practitioners seeking efficient deployment of these models in practical settings.
Shuting Luo, Monika Mikhail Kanaan, Cameron Gordon +2
Jul 28, 2026cs.LG

Empirical Evaluation of Out-Of-Distribution Performance of Tabular Foundation Models

Tabular Foundation Models (TFMs) have emerged as novel approaches for tabular predictive tasks, demonstrating competitive predictive performance to ensemble tree-based models. Most TFMs are trained and evaluated on independent and identically distributed data, but this assumption changes in real-world scenarios due to distribution shifts, which compromise the robustness of models. Limited research has been conducted of TFMs under distribution shifts. We present an empirical evaluation of Out-Of-Distribution (OOD) performance of nine TFMs, spanning diverse pre-training strategies and architectures: TabPFNv2, TabPFNv2.5, TabPFNv2.6, TabPFNv3, TabICL, TabICLv2, Mitra, LimiX and TabFM. Three real-world datasets from the TableShift study were considered (HELOC, Voting, Childhood Lead), covering label, socioeconomic, and geographic shift types. Our results show that all evaluated TFMs degrade systematically under distribution shift regardless of pre-training strategy, with shift gaps ranging from 0.003 to 0.060 depending on shift type. The relationship between in-distribution and OOD predictive performance documented for classical tabular models extends into TFMs. We also identified a scalability gap, as high-performing models demand significant memory and computational resources beyond what standard deployment infrastructure can support. This study extends existing benchmarks for OOD in tabular data, providing evidence to support their adoption in high-stakes domains characterized by structural distribution shifts.
Malena Loza, David Chushig-Muzo, Eva Milara +3
Jul 21, 2026cs.LG

In-Context Time Series Classification with Random Convolutional Features

Time series classification is central to domains like medical signal analysis, industrial monitoring, and sensor-based activity recognition, where class information manifests as localized shapes, specific frequencies, temporal shifts, or complex cross-channel interactions. Random convolutional transforms efficiently map these sequences to fixed-dimensional tabular features but are traditionally paired with simple linear classifiers. We investigate whether a pretrained tabular foundation model can more effectively harness these rich representations. We propose MASHT, a pipeline that marries MultiRocket and Hydra features with the power of in-context tabular foundation models. By leveraging a pretrained tabular foundation model, our approach completely bypasses task-specific model training, requiring only feature extraction and direct inference. Extensive experiments demonstrate that MASHT matches state-of-the-art time series classification baselines on univariate tasks, achieving a lower average rank than HIVE-COTE 2.0. On multivariate datasets, MASHT remains highly competitive with the strongest reference methods.
Joscha Cüppers, Jilles Vreeken
Jul 17, 2026cs.LG

Revisiting data-driven dynamic security assessment with a tabular foundation model

Data-driven pre-fault dynamic security assessment (DSA) rapidly evaluates the dynamic risk of credible contingencies on a power system using machine learning. Existing approaches face two limitations. First, they require a large labelled database for training, with a separate model trained, tuned, and maintained for each contingency in a potentially long list of credible contingencies. Second, the trained models generalize poorly to unseen contingencies. This work addresses the limitations by using a tabular foundation model (TFM) that assesses stability through in-context learning, requiring no retraining or hyperparameter optimization. A single TFM can assess many contingencies at once, removing the need for one model per classifier. We also characterize when the use of electrical distance coordinates (EDC) as continuous features enables generalization of TFM to unseen contingencies and when they do not, demonstrating how a few labelled samples can reliably improve generalization. Through comprehensive case studies on the IEEE 68-bus system, we show that a single TFM attains an average Macro F1 score of about 90% with only 120 labelled samples per contingency, roughly two orders of magnitude fewer than conventionally assumed, without any model retraining or hyperparameter tuning. For new/unseen contingencies, we show that using just 10 labelled samples of the new contingency with EDC encoding matches the best achievable transfer learning oracle model, which requires fully labelled data and is not deployable in practice. Overall, this initial study paves the way towards developing and deploying foundation models for power system operations, with possible applications across multiple operational tasks.
Olayiwola Arowolo, Maosheng Yang, Jochen Cremer
Jul 14, 2026cs.LG

Tabular Foundation Models for Discrete Choice Estimation

Tabular foundation models (TFMs) generate predictions on structured data via in-context learning, without task-specific estimation. We ask whether TFMs can be effectively applied to discrete choice, a central demand estimation framework in marketing and operations, and find that directly applying TFMs yields limited performance. The gap is structural: TFMs assume row-independent observations, whereas discrete choice is inherently set-valued and subject to persistent consumer preference heterogeneity. We propose a reformulation that encodes both choice-set dependence and individual heterogeneity within a row-based learning framework. Evaluated on a yogurt scanner panel, individual-level heterogeneity encoding is the dominant driver of predictive accuracy. The best reformulation outperforms hierarchical Bayesian estimation by 8% in holdout log-likelihood and 3.6% in hit rate, running 16 times faster, a practical advantage for large-scale demand estimation. The advantage is largest in the medium-data regime (10--40 purchase occasions per consumer), where parametric Bayesian shrinkage most distorts estimates for atypical consumers. Fine-tuning on population choice data provides additional gains for consumers with shallow purchase histories, where in-context learning has limited individual-specific signal to condition on. These results establish a principled approach for applying foundation models to consumer choice problems more broadly.
Liu Liu, Dan Zhang
Jul 13, 2026cs.LG

Surprisingly Simple and Effective Multi-Domain Graph Foundation Model through Graph-to-Table Alignment

Graph Foundation Models (GFMs) have emerged as a promising paradigm for learning transferable representations across diverse graph domains. Recent advancements in GFMs have been largely dominated by two paradigms: Graph Neural Network and Large Language Model (LLM) based methods. However, these methods often face a fundamental dilemma between training with limited data and a heavy reliance on textual attributes. Tabular foundation models (TFMs) offer a potential alternative, as node features and representations can be naturally organized in a tabular form. However, how to enable TFMs to effectively capture structural information of graphs remains largely unexplored. The key challenge is to learn a graph-to-table alignment mechanism that enables graph structural understanding for TFMs. To address this, we propose GTAlign, a surprisingly simple yet effective Graph-to-Table Alignment framework for text-free Graph Foundation Model. Specifically, we first pretrain a graph encoder that maps diverse graphs into a unified latent space to capture domain-agnostic graph representations. To further bridge the gap between graph topology and the tabular representation space, we propose community-guided continual pre-training, where pseudo-labels derived from graph community are used to construct few-shot prediction episodes. Lastly, we adapt the graph encoder for an unseen target domain and perform in-context inference. Extensive experiments on five benchmark datasets demonstrate that GTAlign significantly outperforms state-of-the-art baselines on both node and graph classification, offering a simple, effective, and text-free GFM model. Code will be released upon acceptance.
Chunyu Hu, Tianyin Liao, Ge Lan +4
Jul 6, 2026cs.LG

Parameter-Free Encoders Remain Viable for RDB Foundation Models

Given a relational database (RDB) storing heterogeneous tabular information, how can we predict missing (or future) values in some target column of interest? As the space of potential targets is vast across enterprise settings, it is preferable to avoid learning a new model from scratch each time there is a new prediction task. Frozen foundation models based on RDB-specific encoders provide a viable solution, but ideal design remains an open question. On the one hand, it has recently been argued that certain parameter-free subgraph encoders combined with single-table foundation models can achieve near SOTA performance, with no RDB-specific pre-training required. Meanwhile, other contemporary studies advocate for parameterized encoders pre-trained to exploit observable labels for learning task-specific representations. To address this ambiguity, we analyze RDB encoder properties specifically when labels are present as inputs, proving limitations on the potential efficacy of trainable encoder parameters. As empirical validation, we demonstrate that considerably simpler parameter-free encoders are still capable of strong performance across many relevant benchmarking tasks.
Linjie Xu, David Wipf
Jul 6, 2026stat.ML

Context-Constrained Transfer Learning for Tabular Foundation Models via Data Distillation

Tabular Foundation Models (TFMs) have demonstrated strong empirical performance as black-box inference engines through in-context learning. However, their use in transfer learning is limited by two obstacles: strict context-size constraints and sensitivity to distribution shifts between source and target tasks. Directly pooling heterogeneous source data can therefore lead to negative transfer. To address these challenges, we propose Context-Constrained Transfer Learning via ANchoring and DIstillation (TL-ANDI), a posterior-aware distillation framework for TFMs. TL-ANDI constructs a compact source context by solving a budget-constrained optimal transport problem whose cost jointly measures target covariate coverage and posterior compatibility. The selected anchor samples are then equipped with locally distilled labels and combined with a residual calibration step using target data.
Yijun Lin, Sai Li
Jul 4, 2026cs.LG

When Does Small Data Work? Accuracy and Efficiency Trade-offs Between Tabular Foundation Models and Conventional Methods for Crowd-State Classification at Hajj and Umrah

Learning from few labeled examples is a central challenge in tabular machine learning, and it becomes the binding constraint in domains where labeling is costly, such as crowd monitoring during Hajj and Umrah. Tabular foundation models, which predict from only a handful of examples without task-specific training, were recently introduced to address this very-few-label regime. In this study we test them on crowd-state classification to assess how much they help when labels are scarce, and we compare them against standard machine learning methods to characterize the accuracy and efficiency trade-offs between the two approaches. Using three real datasets we evaluate different machine learning models, in untuned and tuned forms, against three foundation models. Results show that no single family is best everywhere. The right choice depends on the label budget. When labels are very few, foundation models lead. As labels grow, tuned conventional models catch up and significantly surpass the foundation models on the more structural geometry target. Efficiency separates them further where tuned machine learning models incur a large tuning cost that foundation models avoid, although foundation models reprocess their context at every prediction. We summarize these results as a practical map of which approach to prefer under a given label budget and computational budget.
AlJawharh S. AlOtaibi, Mohamed Eltahir, Jude AlSubaie
Jun 30, 2026cs.LG

Can Tabular In-Context Learners Generalize to Biomolecular Property Prediction?

Predicting biomolecular properties from limited labeled data is a central bottleneck in protein engineering and small-molecule design. As strong pretrained encoders now supply rich fixed-length representations, the difficulty has shifted from representation learning to building a data-efficient predictor for the few-shot regime. Tabular foundation models such as TabPFN and TabICL are unlikely candidates for this role: they are in-context learners pretrained on synthetic tables drawn from random causal graphs, a generative prior with no obvious correspondence to the processes that produce protein sequences or molecular graphs. That this tabular, causal inductive bias should transfer to biomolecular data at all is counter-intuitive, yet we find it does. Treating each method as a predictor-representation pair, we evaluate across two domains. We find that on protein fitness regression tasks these in-context learning models coupled with ESM Cambrian representations achieve or exceed state-of-the-art results on ProteinGym, and outperform task-specific supervised regressors on a diverse esterase catalytic activity dataset. For small-molecule classification with ECFP/RDKit descriptors, no single predictor-representation pairing dominates across TDC ADMET, MoleculeNet, FS-Mol, and DrugOOD, but they are competitive with the existing task-specific state-of-the-art. Crucially, on both protein and small-molecule few-shot tasks, these predictor-representation pairs offer strong performance. We conclude that tabular foundation models can be strong biomolecular predictors, but only when coupled with expressive representations.
Davy Guan, Lu Zhang, Asiri Wijesinghe +7
Jun 29, 2026cs.LG

Beyond IID: How General Are Tabular Foundation Models, Really?

Foundation models for predictive machine learning on tabular data have recently gained significant traction in academia and industry. Research communities across disciplines are increasingly evaluating tabular foundation models on diverse datasets and tasks. However, these task- and discipline-specific evaluations remain largely inaccessible to model researchers because benchmark software and evaluation protocols are fragmented. As a result, model researchers rely on standard benchmarks, which are mostly defined for tasks where tabular foundation models already excel. The most challenging scenarios are excluded, limiting meaningful progress in the field by focusing on marginal improvements on IID data rather than on broader, more demanding challenges. To overcome this, we introduce BeyondArena, the first unified holistic benchmark for tabular data that supports diverse task types (IID, temporal, grouped), across sample size and feature dimensionality scales, with diverse feature types (with text, with high cardinality) from a broad range of disciplines. To enable unified benchmarking beyond standard benchmarks, we introduce Data Foundry, a Python framework and metadata schema for curating tabular datasets for predictive machine learning. Our results across 11 models and 142 curated datasets show that existing tabular foundation models excel on tiny- to medium-sized IID data, while traditional tree-based and deep learning models still dominate on non-IID, large, and high-dimensional datasets. BeyondArena guides model research for the most demanding challenges in tabular data, enabling progress towards truly foundational tabular models.
Lennart Purucker, Andrej Tschalzev, Nick Erickson +7
Jun 29, 2026cs.LG

KnowsTFM: Knowledge-Informed Fine-Tuning of Small Tabular Foundation Models

Tabular foundation models have advanced deep learning for tabular data by delivering strong default performance across many small and medium tasks. Yet in niche domains, where data is scarce, high-dimensional, and shifted from the pretraining distribution, they may still fail to outperform carefully designed domain-specific methods. Many such domains also provide curated relational knowledge in the form of knowledge graphs and knowledge banks, but how to use this knowledge to improve and steer \textit{small} specialist tabular foundation models remains unclear. We address this problem through \textbf{Know}ledge-informed fine-tuning of \textbf{s}mall \textbf{T}abular \textbf{F}oundation \textbf{M}odels (\modelname). Specifically, we study nanoscale TabPFN- and TabICL-style variants, pretrained under controlled synthetic prior families and adapted using two complementary mechanisms: structural attention priors derived from knowledge graphs and parameter-efficient low-rank updates. We show that injecting domain-specific structural knowledge during fine-tuning yields meaningful gains over vanilla variants in specialist settings, whereas gains on general-domain tasks are marginal. We further observe that continual fine-tuning of frontier models can trigger collapse of pretrained knowledge and mechanisms.
Boshko Koloski, Xiangjian Jiang, Senja Pollak +3
Jun 28, 2026cs.LG

Towards Evaluating Data Priors for Tabular Foundation Models

Data-generating priors are a central component of tabular foundation models because they define the task distribution used during pretraining. However, priors are rarely evaluated as independent components, making it difficult to understand how much they affect downstream model behavior. This raises a methodological question: how can priors from different tabular foundation models be compared independently of the architectures and training protocols they were introduced with? To study this question, we implement a unified interface for publicly available priors from recent tabular foundation models and priors constructed from real datasets. We generate training tasks from each prior, train the same model architecture under a fixed training protocol, and evaluate the resulting models on shared downstream classification tasks. We compare priors through both generated-task statistics and downstream predictive performance. Our results show that different priors favor different downstream behaviors, with some achieving stronger absolute performance and others exhibiting more consistent relative rankings across datasets. We further find that data-level similarity only partially explains downstream behavior. Our code is available at https://github.com/automl/TFM-Playground/tree/prior-dev.
Zeynep Türkmen, Kürşat Kaya, Alexander Pfefferle +1
Jun 27, 2026cs.LG

Statistically Indistinguishable, Operationally Distinct: A Formal Barrier for Tabular Foundation Models

Tabular foundation models cannot reason about data produced by running systems without access to the rules that govern them. We make this statement falsifiable. The \emph{Operational Turing Test} (OTT) constructs pairs of legal and rule-violating database states whose 11- and 22-way column-value marginals match to a total variation of <0.02<0.02; Le~Cam's lemma then bounds any values-only classifier at 0.49\geq0.49 Bayes error. Three values-only baselines (XGBoost, TabICL, TabPFN) hit the bound exactly (accuracy 0.500.50, pre-registered two one-sided tests (TOST) p<0.002p<0.002), raw row-level access does not help, exposing relational value consistency closes most of the gap, and only a classifier fed by seven executable rule-derived audits reaches 1.001.00 classification accuracy. In three matched 100100-state frontier large-language-model (LLM) runs, models given the schema, trigger source, rule tables, and state files classify at most 2/502/50 legal states as LEGAL; GPT-5.5 accepts 0/500/50 legal states even with higher reasoning effort and a Structured Query Language (SQL) executor. The access-ladder pattern also appears on a second schema with structurally distinct rule families (banking ledger: cross-row balance, cumulative aggregate). The barrier is identifiability, not capacity: scale, data, and richer features cannot cross it without operational grounding.
Tassilo Klein, Johannes Hoffart
Jun 24, 2026cs.CR

Privacy Vulnerabilities of Attention Layers in Tabular Foundation Models and Protection of High-Risk Queries

Tabular foundation models are commonly assumed to present limited privacy concerns as they are often pre-trained on large collections of synthetic data. However, these models leverage in-context learning, where sensitive records may be provided directly at inference time as labelled context examples. In this paper, we demonstrate that predictions generated via the attention mechanism leak sufficient information to enable effective Membership Inference Attacks (MIAs). To highlight this vulnerability, we propose AMIA (Attention-based Membership Inference Attack), a shadow-model-free attack that exploits the concentration of transformer attention patterns. Our results show that attention mechanisms reveal strong membership signals, which exceed classical confidence-based attacks, achieving an average gain of 7.7%, specially in low false-positive regimes. To mitigate this risk, we introduce an inference-time defence inspired by kk-anonymity principles. This approach reduces the uniqueness of context-key representations without introducing random noise or retraining the model. By targeting only high-risk queries identified through AMIA scores, the defence substantially reduces membership leakage of this attack by an average of 50% and 25% against confidence-based attacks, while preserving predictive utility with only 3.9% performance degradation. Beyond showing that context examples are vulnerable, we further demonstrate that fine-tuning introduces an additional source of privacy risk. In particular, samples whose prediction confidence increases after fine-tuning become more susceptible to MIAs, indicating that fine-tuning can amplify memorisation and expose sensitive training information through confidence shifts.
Tânia Carvalho, Maxime Cordy
Jun 23, 2026cs.LG

Are Tabular Foundation Models Robust to Realistic Query Distribution Shifts in Microbiome Data?

Tabular foundation models (TFMs) achieve strong performance on microbiome abundance data, yet their robustness under realistic distribution shift remains poorly characterized. We introduce a benchmark that evaluates the robustness of TFMs to biologically inspired perturbations across six gut microbiome datasets spanning four disease contexts. In this in-context learning setting, models receive unperturbed support sets as context and are evaluated on perturbed query samples. To isolate robustness beyond "shortcut" features, we preserve the most discriminative taxa and apply three controlled perturbation strategies: (i) removal of high-abundance (uninformative) taxa, (ii) sparsification via increased zero-inflation, and (iii) zero-imputation via spurious non-zero injections. Our results show that protecting discriminative features is insufficient to guarantee stability under support-query shift: across datasets, all perturbations degrade model performance, with zero-imputation consistently the most harmful, indicating that corrupting global feature structure can break generalization even when key taxa are retained. Sparsification disproportionately affects TFMs relative to a classical random forest baseline, suggesting greater sensitivity to zero-inflation-type shifts. The code is publicly available at: https://github.com/UMMISCO/metagenomics-fm/.
Giulia Perciballi, Ahmad Fall, Federica Granese +2
Jun 17, 2026cs.LG

Reinforcement Learning Foundation Models Should Already Be A Thing

Foundation models for language and vision are powered by internet-scale data, while structured domains such as tabular prediction are powered by synthetic data. This substitute shifts the challenge from collection to prior design. Such priors already exist for many structured tasks: TabPFN and its successors solve tabular classification with a transformer pretrained on a synthetic Bayesian prior. We make two points. \textbf{First}, reinforcement learning is the conspicuous gap: sampling a synthetic MDP is as feasible as sampling a synthetic tabular dataset, yet no in-context RL work treats prior design as a primary objective. \textbf{Second}, MDPs admit a fixed-size sufficient statistic, independent of the episodes observed and tabular in shape, which makes them directly amenable to the attention-based architectures used for tabular foundation models, with a policy head replacing the supervised target. Together these define the agenda for an RL foundation model. As a proof of concept, we train a Graph Attention Network entirely on synthetic MDPs and show that, with no task-specific tuning, it solves held-out tabular benchmarks in context, both online and offline: online, in far fewer episodes than UCB-VI and tabular Q-learning, and offline, competitively with VI-LCB.
Abdelrahman Zighem, Jill-Jênn Vie
Jun 17, 2026cs.LG

Bounded Context Management for Tabular Foundation Models on Stream Learning

Tabular stream learning requires predictions on sequentially arriving examples under distribution shift. While standard methods adapt by updating model states, tabular foundation models (TFMs) make predictions conditioned on a labeled context in an in-context manner, making them a natural alternative for stream learning. This shifts the challenge from how to update the model to how to manage the context. We propose a future information view that yields three practical requirements for context management: preserve recent examples, retain uncertain examples, and remove redundant examples. We instantiate these requirements as CURE (Context management via Uncertainty-aware admission and Redundancy aware Eviction), a context-managing policy with entropy-gated admission and redundancy-aware eviction. Across seven streams, CURE shows up to 27.0% relative improvement over classical stream learners, remains robust across multiple TFM backbones, and ranks first among other policy variants. Code and datasets are available at https://github.com/morcellinus/CURE-ICML-FMSD.
Jinmo Lee, Doyun Choi, Moongi Choi +1
Jun 11, 2026cs.LG

Where Computation Lives Inside TabPFN: Causal Localisation of Attention Head Function

We present the first causal mechanistic analysis of a tabular foundation model, investigating how TabPFN 2.5's feature wise attention heads distribute computation across layers. Using activation patching, ablation, and attention entropy across two synthetic regression datasets, we find clear temporal specialisation: one head's causal necessity dominates that of the others by 2 to 5 times at peak layer, with its dominant layer shifting across tasks of different complexity, while the remaining heads exhibit symmetric late layer profiles. Attention entropy and patching provide convergent evidence for the computationally active layers of the dominant head. We additionally investigate inference time steerability via contrastive activation steering, which fails to transfer across samples. We attribute this result to TabPFN's in context learning mechanism, which encodes task structure through context dependent attention rather than the stable parametric directions that make steering tractable in language models.
Atharva Gupta, Dhruv Kumar, Murari Mandal +1
Jun 10, 2026cs.LG

Tabular Foundation Models for Clinical Survival Analysis via Survival-Aware Adaptation

Predicting time-to-event outcomes such as mortality is a fundamental task in clinical decision-making, commonly addressed through survival analysis. While classical statistical and deep learning approaches have been widely studied, they typically require task-specific training and sufficient labeled data. Recent advances in tabular foundation models offer a new paradigm by learning general-purpose representations for structured data. However, their applicability to censored time-to-event prediction in clinical settings remains underexplored, as typical applications are restricted to discrete classification rather than survival analysis tasks. In this work, we propose a lightweight adaptation approach for applying tabular foundation models to clinical survival analysis by directly training a survival-aware head on top of the pretrained representations. We study representative architectures, including TabPFN, TabDPT, and TabICL, and adapt them using a multi-task logistic regression (MTLR) head to model right-censored time-to-event outcomes. We evaluate this approach on a diverse set of public survival benchmarks and two large-scale ICU cohorts, MIMIC-IV and eICU. Our results show that this transfer learning approach achieves competitive or superior performance compared to strong baselines. On MIMIC-IV, TabDPT-FT-MTLR reaches a C-index of 0.856, corresponding to a relative improvement of +1.4% over the best non-FM baseline (DeepSurv, 0.844) and +6.7% over the best zero-shot model (0.802). On eICU, TabICL-FT-MTLR achieves 0.797, yielding gains of +1.7% (DeepSurv, 0.784) and +6.4% (0.749), respectively. These findings highlight the importance of combining pretrained tabular representations with survival-aware objectives and suggest that tabular foundation models provide a practical and effective alternative for clinical survival prediction.
Minh-Khoi Pham, Luca Cotugno, Alina Sirbu +3
Jun 5, 2026cs.LG

TabSwift: An Efficient Tabular Foundation Model with Row-Wise Attention

Tabular foundation models, exemplified by TabPFN, perform prediction via in-context learning, inferring test labels directly from labeled training examples. They have demonstrated competitive performance, particularly on small-to-medium datasets. However, recent tabular foundation models often improve accuracy with increasingly complex architectures, incurring higher inference cost and limiting practical deployment. In this work, we revisit the original TabPFN design and show that a lightweight row-wise attention-only backbone can remain highly competitive with two simple enhancements: a gated attention stabilization mechanism and a small set of learnable register tokens that provide global context and improve pretraining quality. The resulting model, TabSwift, supports both classification and regression, and is competitive with stronger tabular foundation models (e.g., TabPFN v2 and TabICL) while being more efficient at inference. For latency-sensitive serving, we further introduce an adaptive layer-wise early-exit mechanism that dynamically adjusts inference depth per sample. Overall, TabSwift enables efficient and anytime tabular in-context learning for practical deployments.
Si-Yang Liu, Han-Jia Ye
Jun 3, 2026cs.LG

Towards Unified and Data-Efficient Prognostics and Health Management with Tabular Foundation Models

Data-driven Prognostics and Health Management (PHM) uses time-varying condition-monitoring data to diagnose system states and estimate remaining useful life in engineered assets. These tasks are central to maintenance planning, but industrial PHM data are often fragmented, partially observed, and poorly labeled, which hinders supervised learning. Foundation models offer a route toward reusable predictive systems, yet most time-series foundation models are designed for forecasting and assume long, coherent, regularly sampled sequences. To address this gap, we propose a framework for applying Tabular Foundation Models to industrial time series using in-context learning, and we evaluate them on a variety of PHM tasks. By converting raw unit-level signals into tabular rows, we show that these models perform well across multiple tasks - including prognostics, and diagnostics - and are highly data efficient. We compare them directly with sequence models, transformer baselines, and gradient-boosted trees under a common evaluation protocol. The results indicate that tabular foundation models achieve the best average ranks across prognostic and diagnostic tasks. Our findings further show that PFN-based models are competitive in low-data regimes, that temporal context can be preserved in the tabular representation, and that performance depends on representative context construction under subsampling. These results demonstrate that tabular foundation models provide a practical and general interface for heterogeneous PHM problems.
Raffael Theiler, Lev Telyatnikov, Leandro Von Krannichfeldt +1
Jun 3, 2026cs.LG

GOTabPFN: From Feature Ordering to Compact Tokenization for Tabular Foundation Models on High-Dimensional Data

We investigate how to make small tabular foundation models effective for High-Dimensional, Low-Sample Size (HDLSS) tabular prediction without retraining large backbones. We introduce Graph-guided Ordering with Local Refinement (GO-LR), show its equivalence to weighted Minimum Linear Arrangement, and interpret the practical solver as a TSP-path-style surrogate. We propose GOTabPFN,which builds on GO-LR, and a Neuro-Inspired Subunit Compression (NSC) unit to pool locally adjacent ordered features into meta-features, yielding a compact representation that makes TabPFN-style prediction practical in HDLSS regimes. Across tabular benchmarks, GOTabPFN improves stability and accuracy under tight token budgets.
Al Zadid Sultan Bin Habib, Md Younus Ahamed, Prashnna Kumar Gyawali +2
Jun 3, 2026cs.LG

Data-efficient flood depth prediction through domain-aware coreset selection and tabular foundation models

Near-real-time flood depth prediction demands surrogate models that are accurate, fast, and transferable across watersheds. Supervised surrogates can match physics-based simulators in accuracy but need millions of training rows per watershed and cannot extrapolate beyond their original mesh. We propose a domain-aware coreset construction pipeline that conditions a tabular foundation model at inference time. The pipeline stratifies storms by return period and most-affected watershed, then samples hexagons with a target-aware spatial selector. With 0.7% of the per-watershed training pool, the model attains a mean R2R^2 of 0.663 across nine Houston-area watersheds, within 98.5% of the supervised reference (R2R^2 = 0.673). It transfers to held-out watersheds without task-specific retraining, staying ahead of a coreset-trained supervised baseline. On real storms it exceeds the supervised reference on a far out-of-distribution case and trails it on a mostly in-distribution one. Domain-aware coreset construction lets tabular foundation models deliver data-efficient, watershed-transferable flood predictions without per-watershed training.
Lipai Huang, Adithi Srinath, Manas Singh +2
Jun 3, 2026cs.LG

Towards Pretraining Text Encoders for TabPFN

Tabular foundation models, such as TabPFN, achieve strong performance on tabular datasets with numerical and categorical data, but do not natively handle high-cardinality text features. Standard pipelines, therefore, embed text with a language model and compress the resulting vectors with PCA into a small number of scalar features before inputting them into TabPFN. This creates an information bottleneck: most embedding dimensions are discarded, and the compressed representation must then be expanded again by TabPFN's feature encoder. End-to-end alternatives can avoid PCA, but they require large amounts of pretraining data containing text cells and usually perform subpar compared to tabular foundation models that were pretrained on large amounts of synthetic data. Inspired by modality-alignment approaches like LLaVA (vision-to-LLM token projection) and TableGPT-style systems (table-to-LLM token projection), we introduce the TabPFN Text Adapter (text-to-TFM token projection). We freeze both the sentence encoder and TabPFN, and train only a lightweight adapter that maps text embeddings into a short sequence of tokens in TabPFN's embedding space. This design removes the PCA bottleneck, preserves TabPFN's numerical strengths, and is more efficient to train than end-to-end text-tabular pipelines.
Mustafa Tajjar, Alexander Pfefferle, Lennart Purucker +1
Jun 3, 2026cs.LG

SurvPFN: Towards Foundation Models for Survival Predictions

Tabular foundation models (TFMs) have made rapid progress in standard classification and regression, but time-to-event survival prediction tasks have remained largely untouched. Unlike in standard regression tasks, survival prediction models must account for censored data. Standard TFMs cannot handle natively censored data, leading to biased and inaccurate predictions, making them unsuitable for real-world applications. To overcome this fundamental limitation, we propose \texttt{SurvPFN}, a prior-data fitted network (PFN), for survival prediction tasks. We pretrain \texttt{SurvPFN} on millions of synthetic survival prediction tasks to learn survival via distributional regression that accounts for censored data. \texttt{SurvPFN} works by (1) generating data with Weibull event times and a non-informative censoring mechanism; (2) integrating a censored event indicator; and (3) minimizing a censored negative log-likelihood. On SurvSet, a collection of real-world survival tasks, \texttt{SurvPFN} is highly competitive with classical and deep survival baselines without per-dataset fitting, a survival-specific architecture, or feature engineering. We show that survival can be treated as a continuous-time distributional regression problem with censored loss, unlocking the power of PFNs for time-to-event predictions.
Samuel Böhm, Lennart Purucker, Frank Hutter +1
Jun 3, 2026cs.LG

LimiX-2M: Mitigating Low-Rank Collapse and Attention Bottlenecks in Tabular Foundation Models

Tabular foundation models (TFMs) increasingly rival tree ensembles, but their performance is often compute-inefficient: with standard affine scalar tokenization, each feature injects value variation through an essentially one-dimensional channel, and feature IDs/positional signals cannot increase within-feature value degrees of freedom, yielding weak early-layer value sensitivity and redundant hidden states. We present a unified tokenize-and-route framework for strong TFMs: RaBEL expands each scalar into compact localized RBF features (optionally exponent-gated) to improve conditioning and shallow-layer effective rank, while a reordered bidirectional block S->N->F aligns computation with the readout by aggregating cross-sample context before feature mixing and using attention pooling. Together, these changes yield LimiX-2M, a 2M-parameter model that outperforms larger TabPFN-v2 and TabICL baselines on widely used tabular benchmarks while reducing training and inference costs. These results highlight value-aware tokenization and readout-aligned routing as key levers for improving the accuracy--efficiency trade-off in TFMs. Model checkpoints and inference code are available at https://github.com/limix-ldm-ai/LimiX.
Yuanrui Wang, Xingxuan Zhang, Han Yu +7
Jun 3, 2026cs.LG

OpenRFM: Dissecting Relational In-Context Learning

Relational Foundation Models (RFMs) promise a single pre-trained predictor that, given any relational database, returns predictions in one forward pass via relational in-context learning (ICL). Yet a substantial gap separates open RFMs from their commercial counterparts, and the origin of this gap has not been systematically understood. We dissect a representative framework, the Relational Transformer (RT), from two perspectives. Model side: we show that RT performs relation-level ICL, and a kernel regression view shows it fails when sparse label-cell coverage yields an underdetermined regression. Data side: we ablate RT's pre-training source and find that existing synthetic-only pre-training and in-distribution pre-training drive the same architecture into different regimes, lazy vs. feature-learning. Probing this gap reveals that the missing ingredient is a support-identifiable relational latent in the label-generation process. These two diagnoses translate into (1) a dual-stage ICL architecture that combines the relational backbone with a batch-level ICL layer lifted from a pre-trained tabular foundation model to overcome relation-level label scarcity, and (2) a homophily-aware synthetic plus continual real-data pre-training mixture, augmented with a prototype-based regularization. These choices define OpenRFM, a simple yet effective RFM that improves average task performance by approximately 30% over the RT backbone and surpasses the commercial model KumoRFMv1 on a large set of evaluation tasks.
Zhikai Chen, Junyu Yin, Jialiang Gu +5
Jun 2, 2026cs.LG

Staying Alive: Uncensored Survival Analysis with Tabular Foundation Models

Survival Analysis (SA) is a statistical framework that models the time span until some event of interest occurs. Widely used in several domains, including healthcare and churn prediction, a central challenge in its applicability stems from the time of the event being partially observed or \emph{right-censoring}. Tabular Foundation Models (TFM) have attracted significant interest in recent years due to their ability to perform prediction tasks in a single forward pass, requiring no dataset-specific parameter fitting. Despite their success, their application to prediction tasks on time-to-event data remains difficult due to right censoring. In this work, we present a training-free method to survival regression by leveraging TFMs to both predict the time of the event and iteratively impute right-censored data. Our method uses a TFM to construct an Accelerated Failure Time (AFT) model requiring no training beyond fitting a single scalar parameter. Subsequently, by building on the Buckley-James estimator, we introduce a non-parametric in-context estimator for right-censored data. Our experiments on standard survival analysis benchmarks show that our method is competitive with several parametric and semi-parametric survival regression models that require training, including Cox regression and parametric AFT models.
Mariana Vargas Vieyra
Jun 2, 2026cs.LG

Speedrunning Tabular Foundation Model Pretraining

Pretraining cost is a major bottleneck for research on tabular foundation models, slowing the iteration cycle for new architectures, priors, and optimization ideas. Yet the community lacks a simple way to compare and accumulate pretraining speedups. We introduce a community speedrun for nanoTabPFN: contributors modify a single-file training script and compete to reach a fixed downstream ROC AUC target on subsampled TabArena using one NVIDIA L40S GPU. The current best record reaches the target in 0.92 minutes, an 81x speedup over the 74.32 minute baseline while using 22x fewer synthetic datasets. The speedrun format provides a simple protocol for the community to add, verify, and stack pretraining improvements, with the leaderboard open to contributions. Code and records are available at https://github.com/borawhocodess/modded-nanotabpfn.
Salih Bora Ozturk, Alexander Pfefferle, Frank Hutter
Jun 1, 2026cs.LG

When Tabular Foundation Models Transfer Across Modalities: A Systematic Evaluation Across 95 Datasets, 7 Modalities, and Two Regimes

We present a single classification pipeline that combines an Equiangular Tight Frame (ETF) preprocessing stage with a tabular foundation model for in-context inference, applied identically across modalities once data is mapped to fixed vector representations. We evaluate it on 95 datasets spanning seven signal modalities -- vision, audio, speech, text, molecular, time-series, and tabular. The main methodological contribution is to fix the comparison object: throughout the paper, performance is judged against the strongest lightweight tuned baseline on the same frozen features, while oracle selection, deployed selection, and specialized fine-tuning are reported separately. The pipeline is broadly competitive with strong lightweight tuned baselines on the same frozen features. It does not match the very best specialized models or heavily tuned pipelines on every task, but it stays close, and it runs much faster -- typically 4 to 200 times faster than full backbone fine-tuning, often at comparable quality. We describe how to deploy the pipeline in practice: when to apply ETF preprocessing, how to stop its training without a validation split, how to set up the in-context classifier, and how to calibrate the resulting probabilities. The calibration step is non-cosmetic: TabICL produces well-calibrated probabilities by construction, ETF preprocessing initially disrupts that calibration, and the post-hoc rescaling restores it -- yielding a per-prediction confidence signal that practitioners can use as a trust threshold for confidence-gated deployment. We also report where the pipeline should not be expected to help, and how to identify those cases in advance.
Julien Lafrance
May 27, 2026cs.LG

High Performance, Low Reliability: Uncertainty Benchmarking for Tabular Foundation Models

Recent Tabular Foundation Models (TFMs) have demonstrated state-of-the-art predictive performance, often surpassing Gradient-Boosted Decision Trees (GBDTs). However, the trustworthiness of these models, particularly their uncertainty quantification, has been largely overlooked. We investigate this gap through an extensive study comparing TFMs, GBDTs, and classical baselines on the 112 datasets of the TALENT benchmark. Our results reveal a performance-uncertainty trade-off: although TFMs achieve the highest predictive performance, measured by AUC, they exhibit lower conditional coverage under conformal prediction, measured by SSCS, compared to GBDTs. Complementary experiments on synthetic datasets further characterize the regimes in which this effect intensifies. We conclude that while TFMs advance predictive frontiers, achieving well-calibrated uncertainty remains a major open challenge for their reliable adoption. Code is available at: https://github.com/jose-melo/high-performance-low-reliability
José Lucas De Melo Costa, Fabrice Popineau, Arpad Rimmel +1
May 27, 2026cs.LG

Explaining Tabular Foundation Model Differences Through Meta-Features

With the rise of tabular foundation models alongside traditional models still performing well on many tasks, choosing the right model for a tabular dataset remains difficult. We investigate whether dataset meta-features can explain performance gaps between model families on tabular prediction tasks. Using the TabArena benchmark results, we analyze dataset-level performance gaps and relate them to model-agnostic meta-features. After strict statistical tests with false discovery control, we find that (1) for neural network vs. tree gaps, no meta-feature survives false discovery control, (2) for non-foundation vs. foundation model gaps, one association is robust but does not generalize when tested in leave-one-dataset-out prediction, and (3) for TabICLv2 vs. TabPFN-2.6, one robust association also improves held-out prediction. Furthermore, we conduct a leave-one-dataset-out analysis and find that meta-feature predictors fail to improve meaningfully over a simple baseline. Overall, our results show the heterogeneity of tabular datasets and that global meta-feature approaches are not robust enough to offer explanations on the 51 TabArena datasets.
Markus Herre, Andrej Tschalzev, Sascha Marton +1
May 26, 2026cs.LG

Few-shot Cross-country Generalization of Tabular Machine Learning and Foundation Models for Childhood Anemia Prediction under Distribution Shift

Childhood anemia affects around 40% of children aged 6-59 months globally and arises from heterogeneous factors, limiting model generalizability. We evaluate a transformer-based tabular foundation model against classical supervised methods under cross-country and data-scarce settings. We used DHS data from 16 countries across Africa, Asia, Latin America, the Caucasus, and the Middle East (n=68,856). We compared Logistic Regression, XGBoost, LightGBM, and TabPFN v2.6. Performance was assessed using AUC-ROC, Brier score, and ECE. Generalization was evaluated using leave-one-country-out (LOCO), reverse-LOCO, and few-shot settings. Subgroup analyses included sex, age, residence, maternal education, and wealth. Feature importance was estimated using SHAP. TabPFN outperformed classical models in low-data regimes (<200 samples), showing higher discrimination and better calibration. Across countries, it achieved the lowest Brier score (0.042) and ECE (0.203). Under full-data settings, AUC-ROC ranged from 0.59-0.76 with small between-model differences (0.05\leq 0.05). LOCO performance was stable (0.58-0.69), driven by country context. Reverse-LOCO showed asymmetric transferability. Subgroup performance was consistent with no systematic demographic bias. SHAP identified child age, altitude, and height-for-age z-score as dominant predictors, followed by wealth and maternal education. Performance in childhood anemia prediction is driven more by population variation than model choice. TabPFN provides advantages in low-resource settings through improved discrimination and calibration, highlighting foundation models as promising tools for data-scarce global health prediction.
Yusuf Brima, Marcellin Atemkeng, Lansana Hassim Kallon +4
May 26, 2026cs.LG

Auditing and Fixing Economic Validity in Tabular Foundation Models for Discrete Choice

Tabular foundation models achieve strong accuracy on choice prediction tasks, but their predictions often violate the economic logic those tasks require: raising a price sometimes increases predicted demand, and implied willingness-to-pay estimates are frequently negative or implausible. We propose a two-stage adapter that embeds foundation model predictions within a utility-maximization framework. In the first stage, we estimate a standard choice model whose parameters are constrained to obey economic theory. In the second stage, we freeze those parameters and train a correction term that incorporates the foundation model's predictions as additional information. The result is a model that inherits the foundation model's accuracy gains while guaranteeing monotonic price-demand relationships under policy perturbation and producing analytically computable trade-off measures. On two transportation datasets, the adapter recovers up to 13 percentage points of accuracy over a standard logit model while maintaining perfect economic consistency, something neither the raw foundation models nor conventional distillation achieve.
Yingshuo Wang, Xian Sun, Yanhang Li +2
May 20, 2026cs.LG

A Mechanistic Study of Tabular Foundation Models

Tabular foundation models with different architectures converge in accuracy across a range of classification and regression tasks. This raises questions a leaderboard cannot answer: (i) whether the models execute the same in-context algorithm, (ii) where row, column, and class-permutation invariances originate, and (iii) how robust they are under perturbations engineered against the inferred mechanism. We characterize all three. The model families realize qualitatively distinct similarity-based readouts: from an attention-weighted vote over context labels to a class-conditional mean readout, each confirmed by causal intervention. We find that the representation collapse highlighted in prior work is not a practical concern for them. Each model's permutation invariances trace to specific positional parameters whose removal preserves accuracy and makes approximate invariance exact. Perturbations engineered against each readout reproduce predicted failure modes; hub and rank attacks isolate them from refit baselines. Together these results give a mechanistic account of contemporary tabular foundation models and identify which inductive biases govern both their accuracy and characteristic failures.
Marin Biloš, James T. Wilson, Anderson Schneider +1
May 20, 2026cs.LG

Tabular foundation models for robust calibration of near-infrared chemical sensing data

Near-infrared spectroscopy is increasingly used as a rapid, non-destructive chemical sensing technology for the analysis of food, pharmaceutical, biological, and environmental samples. However, the practical deployment of NIR sensors still depends on calibration models able to handle high-dimensional, collinear spectra, limited sample sizes, preprocessing dependence, spectral outliers, and extrapolation beyond the calibration domain. Here, we evaluate whether tabular foundation models can provide a new calibration strategy for NIR chemical sensing. We benchmark TabPFN on 66 NIR datasets covering 54 regression and 12 classification tasks, and compare direct inference on raw spectra with preprocessing-optimized inference against PLS/PLS-DA, Ridge, Catboost, and one-dimensional convolutional neural networks. The study uses a unified validation framework in which preprocessing and model selection are performed exclusively on calibration data before external test evaluation. In regression, preprocessing-optimized TabPFN achieves the best overall average rank and significantly outperforms PLS, CatBoost, TabPFN on raw spectra, and CNN-1D, while remaining statistically comparable to Ridge. In classification, TabPFN applied directly to raw spectra provides the best average rank, with performance close to the optimized variant. Robustness analyses show that TabPFN provides strong average predictive performance but that its advantage decreases on spectral outliers and extrapolated samples, where classical chemometric models remain competitive. These results suggest that tabular foundation models can complement established chemometric workflows for NIR chemical sensing, especially in small- to medium-sized calibration settings, while highlighting the need for spectroscopy-specific priors and uncertainty-aware deployment strategies.
Robin Reiter, Denis Cornet, Fabien Michel +2
May 20, 2026cs.LG

Modular Multimodal Classification Without Fine-Tuning: A Simple Compositional Approach

We introduce CoMET, \textit{\textbf{C}omposing \textbf{M}odality \textbf{E}ncoders with \textbf{T}abular foundation models}, a simple yet highly competitive method for multimodal classification: pass each modality through a frozen pre-trained backbone, compress the resulting embeddings with PCA, and concatenate as input into a Tabular Foundation Model (TFM) for prediction. We show that PCA alone suffices to act as an adaptor yielding strong, robust performance across modalities. When the \texttt{CLS} tokens of the foundation model align poorly with downstream tasks, we propose \textbf{PALPooling}, a lightweight adaptive token pooler that consistently improves representation quality. By composing strong frozen representation learning backbones with TFMs, our approach achieves state-of-the-art results across diverse multimodal benchmarks without any training. On hierarchical tasks with large fine-grained class spaces, our approach enables fast and scalable classification, handling datasets with over 500,000 samples and 2,000 classes without any fine-tuning. Overall, our results show that the composition of foundation models is a simple, yet powerful, out-of-the-box solution for multimodal learning, challenging the necessity of complex, end-to-end training pipelines for new problems.
Herman Bergström, Aditya Mehrotra, Rahul G. Krishnan
May 19, 2026cs.LG

Machine-Learning-Enhanced Non-Invasive Testing for MASLD Fibrosis: Shallow-Deep Neural Networks Versus FIB-4, Tabular Foundation Models, and Large Language Models

Advanced fibrosis is a major determinant of liver-related morbidity in metabolic dysfunction-associated steatotic liver disease (MASLD). FIB-4 is widely used as a first-line non-invasive test, but its fixed formula may underuse diagnostic information contained in age, aspartate aminotransferase, alanine aminotransferase, and platelet count. We evaluated whether machine-learning-enhanced non-invasive testing (MLE-NIT) can improve advanced fibrosis detection while preserving this FIB-4 variable space. We used three biopsy-confirmed MASLD cohorts from China, Malaysia, and India (n=784). The Chinese cohort was split into 486 training and 54 internal validation/tuning patients; final performance was reported only on the Malaysian and Indian external cohorts. Models used five variables: age, FIB-4, aspartate aminotransferase, platelet count, and alanine aminotransferase. We compared FIB-4 with a shallow-deep neural network (s-DNN), TabPFN, and gpt-4o-2024-08-06. FIB-4 achieved external ROC-AUCs of 0.75 and 0.60 in Malaysia and India, respectively. TabPFN achieved 0.69 and 0.66, fine-tuned GPT-4o achieved 0.75 and 0.63, and the s-DNN achieved 0.77 and 0.67, respectively. The s-DNN contained only 354 trainable parameters, compared with 7,244,554 for TabPFN, yet provided a more balanced external operating profile. Calibration showed s-DNN Brier scores of 0.18 and 0.22, and permutation importance identified AST and FIB-4 as dominant variables. Compact non-linear MLE-NITs may enhance FIB-4-based fibrosis assessment without increasing clinical data requirements.
Athanasios Angelakis, Gabriele De Vito, Eleni-Myrto Trifylli +1
May 19, 2026cs.AI

When Tabular Foundation Models Meet Strategic Tabular Data: A Prior Alignment Approach

Tabular foundation models based on pretrained prior-data fitted networks~(PFNs) have shown strong generalization on diverse tabular tasks, but they are typically designed for \emph{non-strategic} settings where data distributions are independent of deployed classifiers. In many real-world decision scenarios, however, individuals may strategically modify their features after deployment to obtain favorable outcomes, inducing a post-deployment distribution shift. This paper studies whether PFN-style tabular foundation models can generalize to such \emph{strategic} tabular data. We show that strategic manipulation creates a mismatch between the non-strategic prior learned during pretraining and the post-manipulation strategic prior, which leads to systematic prediction bias. To address this issue, we propose \textbf{Strategic Prior-data Fitted Network}~\textit{(SPN)}, an inference-time strategy-aware framework that adapts tabular foundation models to strategic environments without retraining. SPN constructs strategic in-context examples to approximate post-manipulation inputs and aligns PFN predictions with the induced strategic distribution. Experiments on real-world and synthetic tabular datasets show that SPN consistently improves robustness and predictive performance under strategic manipulation compared with both tabular foundation models and classical tabular methods.
Xinpeng Lv, Yunxin Mao, Renzhe Xu +13
May 18, 2026cs.LG

TabQL: In-Context Q-Learning with Tabular Foundation Models

We propose Tabular Q-Learning (TabQL), a reinforcement learning framework that replaces the conventional parametric Q-network in Deep Q-Learning (DQN) with a tabular foundation model endowed with in-context learning capabilities. The key idea is to represent Q-values through a sequence-to-sequence foundation model operating over a tabularized representation of state-action-Q-value tuples, enabling rapid adaptation from limited online interaction by conditioning on recent experience. TabQL departs from classical DQN by leveraging (i) zero- or few-shot Q-value inference via in-context updates, and (ii) a warm-up phase using standard DQN to bootstrap high-quality context. Particularly, to enhance the context quality, new transitions are generated by executing actions output by TabQL with predicted Q values from DQN. We formalize TabQL, analyze its convergence and sample complexity under mild assumptions, and show that TabQL interpolates between vanilla Q-learning and DQN with in-context learning. Our analysis demonstrates that TabQL achieves improved efficiency compared to DQN by amortizing Bellman updates through in-context learning. Extensive numerical experiments with several benchmarks showcase the effectiveness and efficacy of the proposed TabQL.
Qisai Liu, Zhanhong Jiang, Timilehin Ayanlade +4
May 18, 2026cs.LG

Shaping the Prior: How Synthetic Task Distributions Determine Tabular Foundation Model Quality

What determines the quality of a tabular foundation model? Unlike language or vision, tabular foundation models acquire their inductive biases almost entirely from synthetic pretraining distributions, yet the design of these distributions remains poorly understood. Standard synthetic priors are too well-behaved: they omit the irregularities and failure modes that determine deployment robustness. We introduce O'Prior, a compositional realism prior built around four coupled components: a hierarchical SCM meta-generator spanning diverse functional families; a modular realism engine covering heterogeneous marginals, missingness, and target transforms; an explicit stress module injecting confounding and support-query mismatch; and a curriculum-governed, leakage-safe generation protocol. To isolate prior design as the scientific variable, we hold architecture, optimizer, and compute budget fixed and vary only the synthetic task distribution. O'Prior yields consistent and substantial improvements in downstream accuracy and robustness across real tabular benchmarks, with gains concentrated in regimes characterized by distributional irregularities. Ablations confirm that mechanism diversity, realism composition, and shift-aware stress each contribute independently, their effects are not interchangeable. These results establish synthetic prior construction as a first-order and largely overlooked determinant of tabular foundation model quality
Mohamed Bouadi, Nassim Bouarour, Varun Kulkarni +3