Time Series Representation Learning

Latest papers 61

Oct 6, 2026cs.LG

Towards Financial World Modeling

Building a world model requires a state representation useful for planning and decision-making---potentially over tasks unknown at training time. In the context of financial markets, planning and decision-making may require a model to reason about market-wide conditions, asset-specific expected returns, liquidity, volatility, and cross-asset relationships. Yet financial representation learning has largely been evaluated on individual predictive tasks, oftentimes on a single time period using comparatively narrow datasets. We address this through three primary contributions. First, we introduce Market-1T, a dataset containing nearly one trillion observations across U.S. equities from 2008 to 2025 at 1 Hz resolution. Second, we develop and implement a rigorous evaluation protocol. Third, we conduct a systematic large-scale study of financial representation learning, comparing 18 encoder-training strategies across nearly two decades of market regimes. We evaluate learned representations both by their predictive utility on common finance tasks and through probes of latent structure. We find that encoders with similar predictive performance can organize market state very differently. Collectively, we establish a foundation for training and evaluating financial market representations in support of world models such as DINO-WM, V-JEPA 2, and LeWM.
Oct 5, 2026cs.AI

Signature-Based Feature Learning for Human Activity Recognition: A Reproducible Machine Learning Study of Representation, Depth, and Model Choice

Human activity recognition (HAR) relies on transforming sensor signals into informative representations for classification. Although deep learning and handcrafted features are widely used, the role of representation itself is often not systematically isolated. Signature transforms provide a mathematically grounded way to encode temporal order and cross-channel interactions, but their value for HAR under a fully reproducible and leakage-aware framework remains unclear. To evaluate whether signature-based feature learning improves HAR performance compared with raw-signal baselines, and to assess the effects of embedding strategy, truncation depth, model choice, and sensor configuration. Experiments were conducted on the UCI HAR dataset using a fully reproducible pipeline with the original train--test split preserved and subject-disjoint validation to prevent leakage. Three representations were compared: raw flattened signals, time-augmented paths, and lead--lag transformed paths. Signature features were computed at multiple truncation depths and evaluated using multilayer perceptron (MLP) and Random Forest (RF) classifiers under identical preprocessing and validation procedures. A prior K-means-based feature reduction study was also reproduced for comparison. Signature-based representations improved performance when paired with RF models, the best configuration was time-augmented six-channel signatures at depth 6 using entropy-based RF achieving 0.858 accuracy and 0.859 macro F1, outperforming the strongest raw baseline (0.816 accuracy). Lead--lag representations were competitive at moderate depths but did not surpass the best time-augmented models. MLP models did not exceed raw baselines. Signature-based feature learning can improve HAR, but its benefit depends on alignment between representation design and classifier choice.
Sep 30, 2026cs.LG

A Comprehensive Benchmark of Source-Free Universal Domain Adaptation on Time Series Representations

Source-Free Universal Domain Adaptation (SF-UniDA) extends Universal Domain Adaptation by removing access to source data at adaptation time while still handling label-set mismatches between domains. Despite growing interest in this setting for image data, no benchmark exists for time series, which are more challenging. We present the first SF-UniDA benchmark on time series. In addition, we provide the first study of pretrained foundation models as feature extractors for time series domain adaptation. In this context, we identify a critical and previously underexplored limitation of all existing SF-UniDA methods: the inference threshold for unknown-sample rejection is highly sensitive. We address this by proposing a plug-in auto-thresholding module that can be integrated into any SF-UniDA method. Experiments on three well-known time series datasets confirm the suitability of this module. They also highlight that foundation models do not systematically outperform classical backbones and that SF-UniDA tailored for time series is yet to be developed.
Sep 30, 2026cs.LG

Towards Robust Time Series Learning via Capacity-Centric Modulation

Sample-level reliability heterogeneity is common in deep time series learning. Standard training pipelines apply a uniform regularization setting to all samples, which can under-regularize corrupted samples and over-restrict clean samples. Common robustness approaches filter observations in data space or impose priors on latent representations. We propose Capacity-Centric Modulation (CCM) as a complementary, sample-adaptive regularization principle. Under this principle, we introduce SACM (Sample-Adaptive Capacity Modulation), a task-agnostic framework that exploits spectral sparsity to assign sample-wise dropout probabilities along internal activation paths. SACM integrates into existing backbones without architectural redesign and preserves the deterministic inference pipeline. Across 301 real-world dataset-backbone pairs covering 9 forecasting, 32 classification, and 4 anomaly-detection datasets, SACM reduces forecasting MSE by 6.7% on average and improves classification accuracy and point-adjusted F1 by 3.04% and 17.05%, respectively, relative to unmodified backbones, with zero test-time overhead.
Sep 30, 2026cs.LG

When, Not How Much: Evaluating Time-Series Foundation Models on Sparse Events

Pretrained time-series foundation models (TSFMs) are evaluated as forecasters of future values, yet for sparse series many decisions depend only on which future periods contain activity. Standard benchmarks do not assess this. On five sparse datasets, we rank positions within forecast windows that contain both events and zeros. The released point forecasts of 12 TSFMs improve chance-corrected average precision over training-free references by at most 0.031, and in chance-corrected AUC the median TSFM falls below them on every dataset. With event supervision, linear probes of six frozen backbones improve on their backbone's point forecast in 29 of 30 backbone--dataset pairs. Averaging the predicted quantiles instead of taking their median improves the ranking of most TSFMs that forecast the median, and on two datasets the strongest such outputs rival the probes. The probes' advantage over raw-context learners depends on the dataset, and under the same probe, pretrained features outperform randomly initialized ones for five of six backbones. For sparse-event ranking, released point forecasts thus add little over simple references, whereas lightweight event heads on frozen TSFMs rank events better than these forecasts, and the best of them exceed gradient-boosted trees trained on the raw context on three of the five datasets. More broadly, assessing pretrained forecasters on tasks beyond value forecasting requires reporting their outputs, supervised probes of their representations, and raw-context and randomized controls side by side, since each supports a different conclusion.
Sep 29, 2026cs.AI

Geometry-Conditioned Fixed-Scaffold Encoders for Time-Warp Robust Sequence Retrieval

Embedding-based retrieval is attractive for long sequence collections because each item can be encoded once and searched by nearest-neighbor ranking. The difficulty is that the objects being indexed are often observed under a noncanonical clock: cardiac cycles stretch with rate, speech changes with tempo, and sensor traces reach comparable states at different speeds. This paper studies a specific source of instability in patch-based encoders for this regime. If patch boundaries are chosen from signal geometry, then the tokenization can change under the same temporal deformation that the representation is expected to tolerate. We propose GeoPatch, a fixed-scaffold patch encoder that keeps token support independent of geometry and uses slope, curvature, acceleration, affine-residual, and confidence descriptors only as continuous conditioning variables. The design turns boundary variation into feature modulation: geometry can change the embedding through a controlled pathway, but it cannot change the number, order, or support of local tokens. We formalize this distinction through a mechanism-level stability analysis that separates boundary drift, affine timing variation, confidence-weighted geometry perturbation, and retrieval-margin effects. The same local tokens support global embedding retrieval and late-interaction scoring, so the scoring rule can be matched to the evaluation protocol. Across ECG, speech, and multivariate time-series retrieval tasks, GeoPatch improves early-rank retrieval under timing variation while exposing a clear trade-off between local surface matching and strict non-overlap retrieval.
Sep 28, 2026cs.LG

Retrieval-Augmented Diffusion Modeling for Stochastic Discount Factor Portfolios

In this work, we study portfolio optimization under the stochastic discount factor (SDF) framework by learning market state representations that capture the underlying risk structures of financial data. This is challenging due to several factors: financial markets exhibit non-stationary dynamics with shifting regimes, multimodal inputs such as price and news data often contain stochastic noise, and existing diffusion-based approaches, while effective for modeling stochastic dynamics, rely on assumptions such as isotropic Gaussian noise that fail to capture the state-dependent nature of financial uncertainty. To address these challenges, we introduce RADAR, a retrieval-augmented diffusion framework that learns market representations by conditioning on similar historical regimes. RADAR leverages retrieval to construct context-dependent noise distributions, applies conditional diffusion to denoise multimodal representations, and initializes the diffusion process using empirical statistics to reflect state-dependent uncertainty. Experiments show that RADAR achieves state-of-the-art performance on key risk-adjusted metrics while producing economically meaningful signals on asset returns and correlations.
Sep 28, 2026cs.AI

Dynamical Parameters: An Interpretability Framework for Time-Series Foundation Models

This work studies a central gap in interpreting time-series foundation models (TSFMs): a dynamical property may be accessible in a hidden state even when the forecast fails to respond correctly as that property changes. We formalize these properties as Dynamical Parameters, including trend slope, oscillation frequency, and autoregressive dependence. We compare their representation accessibility, measured by recovery from hidden states, with their forecast response, measured by agreement with the expected forecast change. Across nine frozen TSFMs and thirteen laws, 42 of 63 model-parameter cells achieve accessibility above 0.95, whereas their median reference-aligned response relative to the conditional reference is only 0.46. To explain this gap, causal geometry compares the hidden-state change required to produce the reference response with the change induced by the parameter intervention. Directly modifying the hidden state recovers the reference response, but the parameter intervention often moves the state in a different direction. These results show that accessible parameter information need not be expressed in forecasts when input changes miss the required hidden-state direction.
Sep 24, 2026cs.LG

SwitchPFN: Shared Switching Dynamics for Frozen In-Context Time Series Classification

Tabular foundation models (TFMs) provide a promising route to time-series classification, but their effectiveness depends on how sequential data are converted into tabular representations. Existing representations face two challenges: global aggregation can lose the order of temporal evolution, while features computed in independently fitted coordinate systems may not have consistent meanings across sequences. We therefore view representation design for TFMs as a problem in its own right: the representation should preserve local temporal transitions while maintaining a shared feature definition across samples. We propose SwitchPFN, which learns a shared projection and regime codebook from the training sequences, making local dynamic operators and transition features directly comparable across samples. Across the evaluated benchmarks, SwitchPFN achieves the highest mean accuracy among the evaluated methods, improving over the strongest baseline by 4.47% relatively. Ablation studies, parameter sensitivity analyses, and reduced-training-data experiments further examine the contributions of the representation, its main design choices, and its behavior when labeled data are limited.
Sep 22, 2026cs.LG

TimeInteract: Towards Real-Time Interactive Intelligence for Streaming Time Series

Real-world time series evolve continuously, with meaningful changes potentially emerging at any moment. However, existing time-series language models (TSLMs) remain inherently static. They either receive complete sequences for offline processing or alternate between streaming input and response generation, which prevents processing of new observations during interaction. We introduce a new regime, Time-Series Interaction: a model continuously perceives incoming time-series observations and user intent, autonomously decides when to remain silent or respond, and continues processing new observations during response generation. To realize this, we develop TimeInteract with three key designs: a dual-view streaming TS encoder that captures local variations and historical dynamics, a response control mechanism that learns when to trigger a response, and a decoupled streaming inference mechanism that separates control from response generation to avoid blocking subsequent observations. We further formulate a hierarchy of interaction capabilities, progressing from Understanding to Adaptivity. Based on this hierarchy, we construct StreamTSI-34K, a large-scale streaming TS interaction dataset with 34,588 episodes and 77,505 responses across synthetic and real-world time series in single- and multi-turn settings. Across all four interaction levels, TimeInteract consistently outperforms existing LLMs, VLMs, and TSLMs, with gains of up to 23.92 points on challenging tasks. It also improves response triggering while achieving near-zero stream stall and up to 2.15×2.15\times inference speedup.
Sep 14, 2026cs.LG

DCRA: Diffusion-Conditioned Representation Alignment for Robust Time-Series Learning

Learning robust representations for time-series signals under noise and distribution shifts remains challenging, especially in clinical applications such as electroencephalogram (EEG) and electrocardiogram (ECG) analysis. We propose Diffusion-Conditioned Representation Alignment (DCRA), a training framework that repurposes the forward diffusion process as a structured corruption scheduler for representation learning. Different from conventional augmentation and consistency-based methods that rely on independently sampled perturbations, DCRA introduces a structured corruption trajectory via the diffusion forward process, which enables continuous and controlled representation evolution across noise levels. We introduce a feature-level consistency objective that aligns representations across noise levels while preserving class-discriminative structure. This mechanism promotes structure-preserving consistency, which enables smooth and semantically coherent feature trajectories in latent space. The proposed framework is encoder-agnostic and can be integrated with state space models and Transformer architectures. The seizure detection experiments on the CHB-MIT EEG dataset show that DCRA consistently improves performance under multiple noise conditions and achieves higher sensitivity at low false-positive rates. Analysis reveals that DCRA produces more balanced and structured representations compared to baseline and diffusion-only models. These findings highlight the benefit of combining structured corruption with representation alignment for robust time-series learning.
Sep 7, 2026cs.AI

Quantile-Led Feature Extraction for Multi-Horizon Predictive Maintenance in Industrial Manufacturing Systems

In data-driven predictive maintenance (PdM), feature extraction is usually treated as fixed preprocessing: a descriptor set is chosen once and reused while the downstream model or forecasting horizon changes. This paper isolates the representation-learning stage and presents a quantile-led feature-extraction framework based on a dual-stage MLP-QRNN hierarchy. QRNN1 learns a broad ten-quantile conditional distribution for each sensor channel, while skip-connected QRNN2 refines a retained mid-tail quantile set into compact, channel-resolved, distribution-aware features. A fixed thirteen-pipeline ablation spans 1-hour, 70-hour, and 30-day regimes across 72 machines in 9 industrial facilities, with the downstream temporal classifier held fixed within each regime. Increasing the retained mid-tail set from two to four quantiles improves 30- and 60-minute F1-score, reaching 75.92% and 72.44% with attention enabled. The results also show that representations do not transfer reliably beyond their design horizon unless feature capacity, temporal embedding, activation strategy, and sensor breadth are scaled with the forecasting task. The unmodified short-horizon extractor falls to 42.90% F1 at 70 hours, whereas horizon-conditioned extractors reach 60.38% at 70 hours and 79.97% at 30 days. The framework therefore supports treating PdM feature extraction as a horizon-dependent representational stage rather than fixed preprocessing.
Sep 5, 2026cs.LG

Calendar-Structured Sparse Principal Component Analysis for Interpretable Multi-Periodic Electricity Consumption Profiles

Long-term electricity-consumption profiles exhibit several simultaneous periodic structures, including daily, weekly, and annual cycles. This work introduces Calendar-Structured Sparse Principal Component Analysis (Calendar-SPCA), a structured representation-learning method that incorporates this known multi-periodic geometry directly into a low-dimensional factorization. The method represents the feature domain as the Cartesian product of cyclic calendar axes and combines an L1 loading penalty with graph total variation, producing sparse, locally coherent, and directly interpretable latent factors. In this study, Calendar-SPCA is applied to the interpretable analysis of long-term electricity-consumption profiles and evaluated on two independent public smart-meter datasets, GoiEner and Low Carbon London, with different population sizes and temporal resolutions. A factorial experiment characterizes the effects of sparsity and calendar coherence and examines robustness across sample size, latent dimensionality, and repeated fits. At rank 15, Calendar-SPCA retains 96.92% and 82.90% of the explained variance of rank-matched principal component analysis (PCA) in GoiEner and Low Carbon London, respectively, with mean loading sparsities of 61.95% and 81.50%. Comparisons with classical sparse PCA and sparse PCA with total variation (SPCA-TV) show that Calendar-SPCA organizes latent factors into interpretable structures over the daily, weekly, and annual calendar axes while preserving substantial low-rank information.
Sep 2, 2026cs.LG

SMart: A Multi-source Multi-phase Time Series Representation Transfer Framework

Time series representation learning (TSRL) has attracted growing research interests in recent years. Two recent explorations in TSRL are: i) exploiting a transformer-based framework to learn time series; ii) instead of using only the targeted dataset, borrowing time series from other datasets to to facilitate representation transfer. While these two explorations are shown effective, the self-supervised time series recovery task in (i) and the single-source dataset used in (ii) are technically simple and thus can be enhanced with new ideas. In this work, we propose a new TSRL framework, namely multi-source multi-phase time series representation transfer (SMart), which has two novel mechanisms to address the aforementioned deficiencies: 1) a multi-phase recurrence plots recovery task, in three alternative modes, for guiding the encoder to embed time series dynamics into the time series representation; and 2) a source dataset selector to select multiple suitable source datasets to supplement the original target dataset for pre-training the TSRL encoder. Experimental results show that SMart outperforms several state-of-the-art models for time series representation learning, classification and regression on both uni-variate and multi-variate time series datasets, reducing mean absolute error up to 19.5% for time series regression, and increasing average accuracy up to 1.34% for time series classification.
Aug 31, 2026cs.LG

Local Reference Geometry Residual Augmentation for Imbalanced Time Series Classification

Imbalanced time series classification is often addressed by changing the training distribution, objective, logits, or final threshold. These interventions address important biases, yet leave a representation-level question unmeasured: after minority support is reduced, does a learned feature space remain locally reliable around minority regions? We identify a training-local geometry failure: under imbalance, minority cases can lie in sparse, rest-dominated, or mixed feature-space neighborhoods, even when the representation retains useful global class structure. To diagnose and repair this failure, we propose Local Reference Geometry (LRG), a lightweight post-hoc feature augmentation module applied between a fixed feature extractor and the classifier head. Using training features only, LRG measures local exposure and class-mixture risk, then augments each fixed feature with a standardized signed displacement from nearby training geometry and an LDA-projected residual summary. On controlled UCR/Bake Off Redux imbalance benchmarks, paired raw-versus-LRG comparisons show gains for learned, pretrained, and fixed representations, including when LRG is combined with training-level interventions and post-encoder classifier corrections. Ablations show that the gain comes from the signed local residual appended to the original feature, rather than from generic prototype distances, affinity features, scalar statistics, or VLAD-style codes. Further analyses support the proposed local-geometry failure hypothesis: minority neighborhoods become increasingly rest-exposed under imbalance, training-local risk identifies error-prone regions, and LRG gains concentrate in those high-risk regions.
Aug 31, 2026cs.LG

Liquid Gated Attention

Real-world time series often exhibit irregular sampling and extended temporal horizons, requiring models to capture continuous-time dynamics across arbitrary intervals without prohibitive scaling costs. Discrete-time methods collapse variable time intervals into static positional steps; solver-dependent continuous-time models preserve temporal structure but rely on sequential integration, precluding parallelization; and solver-free approximations avoid this cost yet none couples observed time intervals with input-driven state modulation. We propose Liquid Gated Attention (LGA), a solver-free parallel temporal operator. By parameterizing an input-driven gating mechanism with observed time intervals, LGA introduces a continuous-time inductive bias and formulates hidden state evolution as a fast-weight associative memory, enabling parallel computation across the temporal dimension. Using matrix associativity in non-causal encoding and a prefix scan in causal encoding, LGA attains linear temporal complexity in sequence length in both modes. A sequence-level normalization bounds cumulative temporal decay for stable long-horizon optimization. Building on LGA, we instantiate LFormer, a modular backbone for continuous-time representation learning. Across six tasks and sixteen datasets spanning up to 17,984 steps, LFormer demonstrates long-range dependency modeling, fine-grained state tracking, and trajectory reconstruction from sparse and noisy observations, while delivering competitive performance against state-of-the-art discrete-time and continuous-time baselines with linear scaling efficiency.
Aug 20, 2026cs.LG

CLaST: Context-aware Contrastive VAE for Probabilistic Time Series Forecasting

Probabilistic forecasting models are widely used for time series forecasting in domains such as energy systems, finance, medicine, and transportation. In recent years, deep generative models have shown strong results on probabilistic forecasting, yet many conventional approaches struggle to capture internal temporal dependencies, leading to latent representations with limited expressive power. To address this limitation, we propose \textit{CLaST}, a VAE framework for probabilistic multivariate time series forecasting. Unlike existing generative models, CLaST learns embeddings that preserve contextual similarity between observations through our contrastive loss function. Experiments across nine widely adopted benchmarks demonstrate that CLaST consistently surpasses strong baseline methods. In short-term forecasting tasks, our approach achieves improvements of up to 16.4%16.4\% in CRPS and 14.4%14.4\% in NMAE over the second-best method. Furthermore, in long-term prediction CLaST attains superior overall performance, exceeding the second-best method by up to 48.6%48.6\% and 25.1%25.1\% in CRPS and NMAE, respectively.
Aug 7, 2026cs.LG

Beyond Foundation Models: Dimension-Aware Neural Architecture Search with Small-Data Representation Models for Cryocooler Lifetime Prediction

Large-scale pretrained time-series models achieve strong results through large-scale pretraining and task-agnostic representation learning, but they rely on abundant, diverse data that industrial and scientific domains often lack. We therefore propose the FSD-RM (Family of Small-Data Representation Models) paradigm as a practical alternative for limited, domain-specific telemetry. Rather than relying on large-scale pretraining, we focus on capacity-controlled representation learning using established encoder architectures (CNN1D, LSTM, GRU, Transformer), selected for their suitability in small-data settings and interpretability. These encoders are trained unsupervised on multivariate telemetry data and integrated into a two-stage pipeline for downstream lifetime prediction. To systematically examine architectural trade-offs under data constraints, we employ \textbf{dimension-aware neural architecture search (NAS)} to jointly optimize model capacity and input dimensionality. Experiments on cryocooler telemetry show that the proposed approach achieves competitive predictive performance while reducing training cost and model complexity. The contribution lies in combining established representation learning techniques within a coherent, NAS-driven framework tailored to small-data regimes, with explicitly defined parameter settings and design choices. The results indicate that effective representation learning can be achieved without large-scale pretraining when appropriate inductive bias and capacity control are applied.
Aug 4, 2026cs.LG

PRISM: Powerful Time Series to Image (TS2I) Representations for Multivariate Anomaly Detection

Time series anomaly detection (TSAD) underpins applications in predictive maintenance, finance, and cloud computing, however performance remains sensitive to representation choices, especially in multivariate settings. While transforming time series into images has shown success in forecasting and classification, it remains unclear how multivariate, high-dimensional series should be mapped to multi-channel images and whether vision backbones can match time-domain baselines in TSAD. We introduce PRISM, a plug-and-play meta-workflow enabling systematic construction and evaluation of image-based representations for multivariate TSAD. Our evaluation spanning over 7,000 experiments shows that well-designed PRISM configurations are competitive with 24 time-domain baselines, achieving the best VUS-PR on 10 of 14 datasets, with an average improvement of 41% over the best competing method on those datasets. Further, we identify channelization - how the channel dimension of multi-channel images is constructed - as a critical and previously understudied design dimension, and introduce MSM, a novel statistics-based scheme achieving 11-27% gains over PCA-based alternatives. Finally, ImageNet-pretrained encoders transfer effectively to TSAD, with frozen encoders retaining 92% of fine-tuned performance while training 1.8 times faster. Our code is available at: https://github.com/Smendowski/PRISM.
Jul 24, 2026cs.LG

Interpretable EEG biomarkers with bag-of-waves: Spatial and temporal waveform dictionaries for low-data regimes

Electroencephalography (EEG) is widely used to diagnose neurological conditions, but its analysis usually relies on either predefined spectral features or deep neural networks. Predefined features carry a strong bias, since they fix in advance what counts as informative, while deep neural networks and foundation models are hard to interpret and need large amounts of data and compute. We present bag-of-waves, an interpretable framework that learns a small dictionary of recurring EEG waveform templates, called atoms, using shift-invariant k-means without labels. The continuous EEG is then turned into a sequence of atom tokens, whose counts feed a simple downstream classifier or clustering step. We extend this representation in two ways: we add atom-to-atom transitions, which we call n- grams, to capture temporal structure, and we move from single-channel atoms to regional and cross-channel spatial atoms for the multichannel case. We test the method on three complementary datasets, each probing a different aspect: single-channel mouse genotype clustering with only sixteen animals (the low-data and temporal case), resting-state dementia classification (the spatial case), and the TUEV benchmark, a six-way classification of clinical EEG events (a high-data comparison against strong deep and foundation baselines). Across all three datasets, bag-of-waves achieves performance competitive with state-of-the-art deep and foundation models. Yet, it operates with a fraction of the parameter count and provides full interpretability: because every atom corresponds to an inspectable waveform, the method explicitly recovers known clinical morphologies that a neurophysiologist can directly validate. Its main advantage is that it works in the low-data regime where heavier models are a poor fit.
Jul 6, 2026physics.chem-ph

Physically-Relevant Information Learning in High-Dimensional Time-Derivatives Spaces

Understanding the physics of many-body complex dynamical systems may be a non-trivial task. High-dimensional analysis approaches are often deemed necessary to prevent losing important information. Typically, these use order parameters or descriptors capturing information related to, e.g., relative positions, symmetries, etc., of the units in the studied system. However, in many cases, gaining information related to the relative positions of the constitutive units (or their velocities) alone may be insufficient, and to reach a more complete physical knowledge, one should ideally learn and correlate with each other both structure and dynamics. Here we demonstrate how to achieve such a goal efficiently by building and navigating high-dimensional Time-Derivatives (TiDe) spaces. A TiDe space can be generated for virtually any type of system/phenomenon from the time-series data collected along its observation over time. Each TiDe's dimension corresponds to a growing-order time-derivative of the extracted data, thus containing information related to different physical phenomena/events, which can be easily extracted via unsupervised approaches. We demonstrate how, by definition, TiDes can be directly analyzed without a need for prior dimensionality reduction, providing results that are intrinsically intuitive to interpret. We show the potential of the method by analyzing two prototypical example datasets extracted from molecular dynamics simulations or experimental tracking of different types of complex dynamical systems. Our results demonstrate how efficiently one can navigate and learn in information-rich TiDe spaces, which provide a robust general framework for data analysis and for studying complex dynamical systems from the data collected along their observation over time.
Jul 4, 2026cs.LG

Omni-Sleep: A Sleep Foundation Model via Hierarchical Contrastive Learning of CNS-ANS Dynamics

Sleep physiology arises from the coordinated dynamics of the central nervous system (CNS) and autonomic nervous system (ANS), as reflected by multimodal polysomnography signals including EEG, EOG, EMG, ECG, and respiration. However, existing sleep foundation models often fuse heterogeneous biosignals in a topology-agnostic manner, overlooking their physiological organization. We introduce Omni-Sleep, a sleep foundation model that uses the CNS/ANS partition as a physiological prior for topology-constrained representation learning. Omni-Sleep learns structured representations through three objectives: intra-system consistency, which captures shared subsystem-level factors within neural and cardio-respiratory signals; inter-system synchronization, which aligns subsystem trajectories to model brain--body dynamics; and latent-space masked temporal modeling, which captures long-horizon sleep dynamics. Pre-trained on over 100,000 hours of multi-center multimodal PSG data, Omni-Sleep is evaluated on sleep staging and multi-disease classification. Across datasets and modality-ablation settings, Omni-Sleep outperforms strong foundation-model baselines, showing improved label efficiency, cross-dataset generalization, and robustness to missing modalities. These results highlight the value of physiological hierarchy for generalizable sleep representation learning. Code is available at https://github.com/AutoBrain-sleep/OmniSleep.
Jul 3, 2026cs.LG

Missingness as Signal: Channel-Independent Spectrogram Learning for Clinical Time Series Prediction

Clinical time series prediction in intensive care units remains challenging due to heterogeneous physiological variables and informative missingness. The presence or absence of a measurement can reflect clinical decisions and patient severity, and thus missingness can serve as a predictive signal rather than a simple data artifact. This work presents CISM, a Channel-Independent Spectrogram framework with a Missingness stream for clinical multivariate time series prediction. CISM converts each clinical variable into a variable-wise time-frequency spectrogram, preserves variable identity through variable-aligned encoding, and aligns an explicit missingness stream with the spectrogram representation. Experiments on an in-hospital mortality task derived from MIMIC-IV show that CISM achieves the highest mean AUROC (0.7225), AUPRC (0.3308), and F1 (0.3808) among the compared time series, missingness-aware, vision, and time-frequency baselines. Ablation studies further show that observation patterns provide a meaningful informative signal. Pixel-level mask injection improves performance over plain spectrogram inputs and recovers much of this predictive value. The aligned missingness stream contributes a further, complementary gain in both AUROC and AUPRC. These results highlight the importance of modeling observation patterns as structured signals in clinical time series prediction.
Jul 1, 2026cs.LG

Aionoscope: Debugging Latent-State Accessibility in Time-Series Representations

Time-series models are often evaluated by what they can forecast or classify, but those scores do not show whether their representations preserve the process state a user may want to inspect: event timing, phase, amplitude, frequency, or regime variables. We introduce Aionoscope, a generator-based diagnostic tool for debugging latent-state accessibility in frozen time-series representations. Aionoscope separates process generation from observation rendering, producing seeded synthetic streams with exact categorical and dense labels across mixture complexity and nuisance variation. We instantiate Aionoscope as Primitive Process Mixtures and evaluate 37 model-plus-adapter systems with a common pooled linear-probe protocol. The main result is a mismatch between coarse and fine-grained accessibility. Most systems make component presence easy to recover, but expose dense process state much less reliably: the highest observed dense-probe row reaches 0.689 mean masked R2R^2, while a dense-feature oracle reaches 0.999. This is the failure mode Aionoscope is designed to surface: a representation can look informative at the level of "what kind of signal is present" while hiding the timing, phase, amplitude, frequency, or regime variables needed for debugging.
Jun 26, 2026astro-ph.IM

Domain-Informed Multi-View Self-Distillation for Astronomical Light-Curve Representation Learning with JEPA

Light curves describe temporal variations in the brightness of celestial objects. Learning robust representations of light curves is essential for large-scale automatic discovery in the dynamic universe, but existing time-series foundation models often struggle with the uneven sampling, complex noise, and wide range of physical timescales that characterize astronomical observations. We propose a domain-informed representation learning framework for irregular astronomical time series with Joint-Embedding predictive architecture (JEPA), combining semantics-preserving views, uncertainty-aware tokenization, and multi-view self-distillation. The encoders are trained with multi-view self-distillation using LeJEPA regularization on the LEAVES dataset and evaluated on the StarEmbed classification benchmark. On StarEmbed, our model outperforms hand-crafted features on 15 of 16 classification metrics. In few-shot linear probing, it achieves macro-F1 scores of 42.56 ±\pm 7.21 with one sample per class and 63.58 ±\pm 1.20 with 100 samples per class, consistently improving over hand-crafted features. Beyond variable-star classification, the learned representation supports similarity search, parameter estimation, and photometric zero-point drift detection. We further evaluate cross-domain adaptation on 12 heterogeneous irregular time-series datasets from PYRREGULAR, where the adapted variant matches or exceeds previous state-of-the-art performance on 5 datasets, compared with at most 3 wins by any single prior baseline. These results demonstrate that domain-informed multi-view self-distillation is an effective strategy for learning representations of irregular time series, while also highlighting that successful time-series representation learning requires domain-specific inductive biases rather than a universally optimal architecture.
Jun 26, 2026cs.LG

Are Time-Series Foundation Models Ready for E-Nose Data? An Empirical Assessment of Their Embeddings

Inspired by advances in natural language processing and computer vision, "time-series foundation models" (TSFMs) have recently been introduced with the promise of strong generalization across diverse time-series tasks, including forecasting, classification, and anomaly detection, as well as across domains such as healthcare, climate science, and manufacturing. However, their utility for gas-sensing data remains largely unexplored. To address this gap, this paper systematically evaluates recent TSFMs on electronic nose (E-Nose) data. In particular, we investigate whether embeddings produced by representative TSFMs, including Chronos-2 and MOMENT, provide effective representations for gas identification and concentration prediction. Specifically, we show that fine-tuning is necessary to achieve satisfactory performance on E-Nose data, and fusing TSFM embeddings with representations learned by specialized predictive models can further improve the performance, suggesting both the potential and limitations of current TSFMs for gas-sensing applications.
Jun 24, 2026cs.CV

Naturalness Predicts but Does Not Cause Transferability in Image Encodings of Real-World Streams

A common practice converts a one-dimensional signal into an image so that a vision backbone pretrained on natural photographs can be reused for recognition, yet the encoded image is rarely examined. We ask how the visual naturalness of an encoded image relates to its transfer accuracy under a frozen backbone. We build WorldStream, a corpus of 299 heterogeneous current-value series from key-free public APIs (weather, air quality, earthquakes, gold and oil, equities, crypto, foreign exchange, web activity and space weather), with a nine-way source-recognition task over 3143 temporally split windows. Across seven encodings and six frozen backbones, the Frechet distance of an encoding to natural images (FID) predicts its accuracy: Spearman ρ=−0.72ρ=-0.72. Two controlled interventions show this is not causal in the spectrum. Our invertible encoder has a single adjustable part, a spectral exponent ββ (power ∝∣f∣−β\propto |f|^{-β}); varying ββ moves the image toward or away from the natural-image manifold at fixed content. FID is lowest near the natural value β≈2β\approx 2, but frozen accuracy stays flat and far below the structured baselines (19.2% vs. 73.0%), and FID and accuracy are only weakly related over the sweep (Pearson −0.32-0.32). A second intervention, phase scrambling, holds the power spectrum exactly fixed while removing local structure; now FID and accuracy fall together (Pearson −0.89-0.89). The cross-encoding correlation is thus mediated by local structure, not spectral naturalness: FID predicts accuracy because Inception reads the same structure the backbones do. Full fine-tuning does not close the gap (27% vs. 67%), so the deficit is structural. The encoder is exactly invertible, recovering the signal from the 8-bit image at 72.9 dB, so the image doubles as a lossless record of the data.
Jun 20, 2026cs.LG

SPOTR: Spatio-temporal Pooling One-Token Reconstruction for Universal Physiological Signal Self-supervised Learning

Physiological signals such as EEG, ECG, and PPG are widely used in clinical monitoring. Recent self-supervised learning (SSL) methods offer an attractive way to leverage unlabeled recordings, yet they still fall short in practice. In particular, current SSL methods struggle across heterogeneous datasets, often distorting clinically meaningful structures or learning shortcuts from temporal and cross-channel redundancy. Consequently, existing SSL methods often deliver limited performance under linear probing, a lightweight adaptation setting that better matches real-world medical scenarios. Moreover, most Transformer-based SSL models encode a flattened spatiotemporal token sequence, incurring high computation and memory cost, and are typically developed within a single modality. To address these limitations, we present SPOTR (Spatio-temporal Pooling One-Token Reconstruction), a compress-reconstruct pretraining framework that introduces a single-token global bottleneck for physiological signals. SPOTR compresses each waveform into a single-token representation and reconstructs the signal conditioned only on this representation. Meanwhile, SPOTR introduces an efficient spatio-temporal compaction module to reduce computation and memory cost. Pretrained on 20 datasets spanning EEG, iEEG, ECG, and PPG, SPOTR consistently outperforms the strongest baseline under linear probing, improving average AUC by 18.49%, 21.71%, 17.86%, and 4.64%, respectively. Compared with a representative general-purpose time-series foundation model, SPOTR achieves around 78% lower latency and 52% lower peak GPU memory on average. The code can be found at https://github.com/5GYYYYY/SPOTR.
Jun 17, 2026cs.CL

Beyond Tokenization: Direct Timestep Embedding and Contrastive Alignment for Time-Series Question Answering

Recent advances in large language models (LLMs) have given rise to time-series question answering (TSQA), which formulates time-series analysis as natural-language question answering. However, directly feeding raw numerical series into LLMs suffers from a tokenization bottleneck: Byte Pair Encoding fragments continuous values into unstable tokens whose embeddings lack meaningful metric structure, resulting in the loss of magnitude, scale, and trend information. Prior methods use patch-based encoders that split the series into fixed windows, locking in one granularity that breaks patterns and hides exact timesteps, through a separate module that rarely transfers across datasets with different lengths or sampling rates. To address this challenge, we propose CADE (Contrastive Alignment with Direct Embedding), a novel framework for TSQA built upon two key components: direct timestep embedding and semantic alignment. The proposed framework maps each timestep directly into the LLM embedding space through a point-wise linear encoder and MLP projector, preserving exact index-level access while eliminating the need for patching and padding. To further bridge the semantic gap between time-series and language representations, we introduce a novel one-directional supervised contrastive loss that aligns time-series embeddings with frozen class-name text anchors. Experimental results on the public Time-MQA benchmark demonstrate that our framework consistently improves performance across six TSQA tasks, outperforming both open-source and proprietary LLM baselines.
Jun 11, 2026cs.LG

A Stationarity-and-Coupling Criterion for Training-Free Time-Lagged Spectral Embeddings of Multivariate Time Series

We study training-free fixed-length descriptors for multivariate time series and ask not merely whether such a descriptor performs well, but when it can be expected to work at all. Our object of study is D(τ)D(τ), built from a time-lagged correlation matrix truncated at the Marchenko-Pastur edge so that only signal-bearing eigenvalues survive and classified by cosine similarity to class centroids with zero learned parameters. The central contribution is not the descriptor but a falsifiable applicability criterion for it. Working from a stationary Gaussian VAR(1) model, we argue that D(τ)D(τ) separates two classes when the signals are approximately stationary and the class information lives in their cross-channel temporal coupling rather than in marginal per-channel power. We derive, semi-formally, three consequences: a distinguishability condition, why the static (τ=0τ=0) covariance collapses to chance, and why a stationary but power-discriminated paradigm defeats the descriptor. The criterion is operational: a two-part pre-flight test -- an augmented Dickey-Fuller stationarity check and a power-baseline saturation check -- predicts applicability before any training. We validate both halves on a mixed assortment. On four paradigms that satisfy the criterion (Sleep-EDF, BCI-IV-2a, MIT-BIH, ESC-50) the descriptor is competitive with strong baselines at a fraction of their cost, reaching 88.5±4.5%88.5\pm4.5\% under 20-subject leave-one-subject-out on Sleep-EDF on a single CPU thread. On three that violate it -- non-stationary ERPs, and financial-volatility and wearable-stress regimes that are power-discriminated -- it fails exactly as the pre-flight predicts, and these negatives are the more informative half. We are explicit that D(τ)D(τ) is not the most accurate representation; its value is a compact, training-free embedding whose domain of validity is known in advance.