Graph Reasoning

In autonomous driving, understanding scene topology - the connectivity between lanes and traffic elements - is critical for safe path planning and motion control. While current methods excel at detecting individual map elements, their connectivity reasoning often falls short of its theoretical potential, leaving a significant performance gap relative to the theoretical upper-bound achievable given the underlying detections. Furthermore, the decision-ready topology graphs passed to downstream tasks often remain unreliable. Current approaches typically derive connectivity by thresholding continuous topology scores; however, these scores often fail to reflect the true logical likelihood of connectivity, resulting in false positives or missing connections. Existing benchmarks further overlook this issue by primarily evaluating continuous metrics, rather than assessing the discrete connectivity required for decision-making. To bridge these gaps, we propose TopoEnhance, a novel topology enhancement framework designed to unlock the latent potential of existing methods and improve the reliability of decision-ready topology. We formulate topology enhancement as a denoising-based reconstruction process, where the model learns to recover structural consistency from stochastically corrupted ground-truth graphs. This formulation enables the model to resolve logical inconsistencies and rectify unreliable connections, producing robust discrete topology graphs that closely approach theoretical maximum performance. Extensive experiments across different baselines show that TopoEnhance consistently improves both continuous topology metrics (TOP score), and discrete connectivity measured by our adapted Topology Jaccard Similarity (TJS) metric. As a flexible, source-agnostic framework, TopoEnhance delivers substantial gains across diverse state-of-the-art baselines without requiring retraining.

Post-discharge risk prediction from electronic health records (EHRs) is difficult because many dependencies that link discharge-time observations to downstream complications, such as comorbidity cascades and drug-disease interactions, are absent from the record. External medical knowledge graphs (KGs) can supply these missing dependencies, but tracing them demands three properties: KG exploration must remain cost-bounded, retrieved evidence must be differentiated by source quality, and the resulting rationale must be citable for retrospective review. Large language models (LLMs) can plan and verify over structured evidence, making them natural candidates for KG reasoning, but existing LLM-based methods do not satisfy these three properties jointly. In this paper, we propose BAR, a Budget-Aware LLM Reasoning framework over medical KGs with three contributions. First, BAR refines the raw KG into disease-specific evidence graphs whose edges carry support scores and provenance records, turning the KG into a quality-annotated reasoning space rather than a static feature source. Second, an LLM then reasons over this graph through a plan-navigate-verify loop that decomposes the question into steps, retrieves evidence under a patient-specific budget, and revises when verification fails. Third, a reasoning policy is trained with a reward that compares predictions with and without acquired evidence, combined with acquisition cost and citation-integrity terms. Across 8 diseases and 3 prediction horizons on MIMIC-III and MIMIC-IV, BAR improves AUPRC by 3.4 points over the strongest baseline, raises citation precision from 59.8% to 77.9%, and consumes only 62-65% of the budget cap.

Can structured text replace vision for diagram reasoning? A wrong answer after textualization can arise because the representation omits information the question needs, or because the solver fails to use information that is present. We introduce a diagnostic protocol to distinguish these explanations. Using the same solver model and generation settings, we compare three input conditions: the original image, question-blind structure extracted by a vision-language model, or gold structure derived from the diagram source. Validity-triggered recovery tests truncation and schema failure, question-relevant fidelity measures preservation of answer-critical structure, and matched edge interventions test the effect of error location. On a reserved holdout of 240 public FlowGen diagrams, evaluated under a frozen protocol, gold structure reaches 87% accuracy while direct vision and learned text both remain below 30%. The aggregate comparison includes source-derived relation labels that may not be printed in the image and uses different learned and gold graph encodings, so it does not isolate extraction error alone. Retrying only invalid extractions makes nearly every public representation schema-valid yet leaves accuracy essentially unchanged. The public learned-text deficit relative to gold more than doubles with structural difficulty. Question-relevant topology predicts correctness better than whole-graph topology. In an exposed intervention study, a single answer-relevant edge edit reduces the primary solver's original-answer accuracy to near zero, while matched irrelevant edits largely preserve it. Supplied structure requires fewer solving tokens than vision, but learned acquisition removes this advantage at single use. These comparisons motivate evaluating acquired text by the answer-relevant evidence it preserves and by the solver's ability to use that representation.

Large Language Models (LLMs) are increasingly asked to reason over structured data such as graphs, yet how reliably they can carry out multi-step graph algorithms in language remains unclear. Existing evaluations tend to use simple tasks on small graphs, to score code generation rather than reasoning over the graph itself, or to fix a single input format. We introduce Graph Theory Bench (GT Bench), a benchmark covering 24 classical graph problems in 44 task-structure settings, with over 100,000 examples across four representations: natural language, structured language, adjacency list, and adjacency matrix. Evaluating eight LLMs on GT Bench shows that accuracy is strongly tied to the input representation, that the best representation shifts with graph density, size, and topology as well as with the model, and that this sensitivity persists, attenuated, in the strongest reasoning models. Building on these observations, we propose the Graph Theory Agent (GTA), which pairs a preference-trained representation selector with plan-and-decompose scaffolding around a frozen executor LLM. GTA lifts Phi-4 from 53.5% to 69.1% on the benchmark's easy split and from 33.0% to 41.5% on its hard split, outperforming eight prompting and agent baselines, and transfers without retraining to GraCoRe and NLGraph. Code for benchmark generation and evaluation: https://github.com/xzx34/GTA. The project homepage is available at https://xzx34.github.io/gta/.

Inductive knowledge graph completion (IKGC) aims to predict missing links involving entities unseen during training, requiring models to learn transferable relational and structural patterns. Existing subgraph- and path-based approaches often encode relational paths independently of their surrounding query subgraphs, although the predictive relevance of a path may vary across structural contexts. We propose PEARL, a Path-Entity Aligned Relational Learning framework that models paths as context-conditioned reasoning signals. PEARL constructs a query-specific contextual subgraph from the union of the query entities' neighborhoods and uses a large language model (LLM)-guided retriever to distill semantically relevant paths. It then builds a bipartite interaction graph over paths, contextual entities, and a global subgraph representation, allowing path embeddings to adapt to local and global structural evidence. To suppress noise introduced by the enlarged context, PEARL employs a dual-view contrastive objective that promotes representation consistency under stochastic contextual perturbations. Experiments on WN18RR, FB15k-237, and NELL-995 show that PEARL obtains the best average Hits@10 among the compared IKGC methods on all three benchmarks. Ablation studies, efficiency analyses, and case studies further validate the contributions of contextual subgraph modeling, semantic path retrieval, path-entity interaction, and contrastive regularization.

We present SG-AMP, integrating robust depth completion with input-conditioned uncertainty, persistent panoptic mapping, plant scene-graph reasoning, and semantics-aware active view-motion planning. Beyond inspecting uncertain observed regions, the scene graph explicitly hypothesizes unobserved pepper--peduncle attachments and directs close-range sensing toward them. Candidate views are selected according to expected information gain, while class-dependent motion costs distinguish protected peppers, peduncles, and stems from conditionally traversable foliage. On pepper data, the perception network achieves $55.27\%$ semantic mIoU, $38.67\%$ PQ, and $40.62\,\mathrm{mm}$ depth RMSE, while input-conditioned uncertainty improves NYUv2 NLL from $-1.6518$ to $-1.6925$ and AUSE from $0.0102$ to $0.0087$.

Medical referral (directing patients to the appropriate hospital department) is a complex decision-making process requiring the synthesis of multimodal data, including patient narratives, laboratory indicators, and radiology imaging. While Large Language Models (LLMs) have advanced medical dialogue systems, they struggle with real-world referral tasks due to two primary limitations: (1) Information Overload, where models fixate on high-frequency disease terms while overlooking subtle but critical urgency indicators; and (2) Unstructured Collaboration, where existing multi-agent frameworks rely on loose dialogue that leads to semantic drift and confirmation bias. To address these challenges, we introduce MASGR (Multi-Agent Structured Graph Reasoning), a framework that treats referral not as a classification task but as a structured graph construction problem. MASGR deploys specialized agents to extract evidence from distinct modalities and coordinates them through a clinical reasoning graph. This graph forces agents to establish explicit logical connections between conflicting evidence. Furthermore, we integrate a knowledge-guided arbitration mechanism that prioritizes patient safety rules over standard diagnostic classification. Extensive experiments on real-world medical records demonstrate that MASGR significantly outperforms state-of-the-art LLMs and existing multi-agent systems, particularly in complex cases requiring the balancing of chronic disease management and emergency intervention. The AI contribution lies in the Multi-Agent Structured Graph Reasoning framework that transforms unstructured multi-agent dialogue into a verifiable logical graph construction. The engineering application is demonstrated through its deployment in a complex healthcare decision-making system to optimize the precision of complex medical referrals.

The increasing complexity of enterprise business scenarios has promoted the widespread adoption of long SKILL documents in agent systems, posing new challenges for compliance detection: large models incur substantial inference costs, while small models may fail to maintain detection accuracy. To address this gap, we propose SkillCDG, a graph-based framework for long SKILL compliance detection. SkillCDG represents complex business policies as a two-layer constraint dependency graph, where the upper layer indexes SKILL descriptions for scenario routing and the lower layer captures dependencies among atomic constraints within each SKILL. During inference, two-level retrieval followed by dependency closure supports compliance judgment and source traceability. We comprehensively evaluate the framework on three enterprise datasets and two controlled public benchmark variants. Experimental results demonstrate that SkillCDG outperforms baseline methods by up to 12.8 percentage points in detection F1 score, while reducing token consumption by a maximum 64.3%. Moreover, we further investigate the inherent relationships among policy-graph complexity, model scale, and detection performance. Comparative experiments conducted on four checkpoints from a single model family validate a concise and effective scaling trend: end-to-end detection correctness exhibits a complexity-differentiated scaling pattern, and the complexity metric derived from the constraint dependency graph can effectively quantify instance difficulty and the performance improvement potential of models. Leveraging this insightful scaling trend, we conduct adaptive training sample selection and adopt on-policy distillation to efficiently enhance the compliance detection capability of small-scale models.

Deep search has become a fundamental capability of large language models (LLMs) for solving open-domain complex tasks. However, existing approaches typically rely on linear sequential reasoning for both trajectory generation and inference, making it difficult to consistently preserve intermediate states and constraints throughout long-horizon multi-hop search. Consequently, they often suffer from context forgetting, search drift, and inefficient exploration. To address these limitations, we propose $\textbf{G-ReAct}$, a reasoning framework for deep search that organizes reasoning as $\textbf{state evolution over a fixed-topology query graph}$. The evolving graph state explicitly tracks search progress and guides subsequent decisions, transforming exploratory search driven by textual history into graph-guided reasoning under explicit constraints. G-ReAct supports both training and inference: it generates high-quality deep-search trajectories for supervised fine-tuning and provides structured guidance for inference-time search without additional fine-tuning. Experiments demonstrate that with only 1.9K generated trajectories for fine-tuning, Qwen3-30B-A3B-Thinking-2507 achieves $52.6\%$ accuracy on BrowseComp-ZH and $79.0\%$ on XBench, outperforming comparable open-source methods trained on substantially larger datasets, including RL-enhanced methods. Furthermore, when applied at inference time, G-ReAct consistently improves the performance of existing strong LLMs on deep-search tasks. We will publicly release all code and model weights.

Graphs model relational data throughout science and industry, from citation networks to product co-purchase graphs. Because the nodes of many such graphs carry rich text, a growing line of work applies large language models (LLMs) to graph analysis. The most graph-native of these methods use graph tokens: a graph encoder compresses a graph view, such as a node, its k-hop neighbourhood, or a cluster, into a short block of continuous tokens that jointly encodes node attributes and topology and is read directly by the model. Existing methods, however, use graph tokens in a static single-shot manner: they encode one predefined graph view before the model has even seen the target and never revise it, leaving the model's step-by-step reasoning ability unused. We introduce agentic graph token reasoning, which recasts graph tokenization as part of the reasoning process itself. At each step, the model chooses which graph view to encode and at what granularity; a graph encoder is invoked on demand to materialise the corresponding graph tokens; and the resulting block is spliced into the running context. The model thus reasons step by step in the graph token space, and the tokens it reads are trajectory-dependent. We realise this with a three-stage training pipeline: (i) self-supervised tasks that teach the model to read heterogeneous graph tokens, (ii) a token-robust trajectory stage with a graph-token consistency regulariser, and (iii) preference optimisation that rewards trajectories in which the graph-token evidence and the node-text evidence agree. Across evaluations spanning seven graph domains, our models outperform a broad set of baselines by a large margin and transfer zero-shot to unseen domains without any per-target fine-tuning. More broadly, this work pushes LLM-based graph analysis from static graph-token encoders towards a graph-native agent paradigm.

Large language models (LLMs) have demonstrated remarkable capabilities in natural language processing. However, LLMs often suffer from hallucinations and lack of relevant knowledge when dealing with question answering (QA) tasks. To mitigate these issues, knowledge graphs (KGs) have been utilized to enhance LLM reasoning. Nevertheless, KGs often contain noise and errors, while existing KG-enhanced LLM approaches are generally unable to identify and filter such noisy and erroneous content, which can instead amplify hallucinations and pose challenges for reliable reasoning. Uncertain knowledge graphs (UKGs), which associate each triple with a confidence score to quantify uncertainty, offer a promising direction to address this challenge. Compared with prior work, we investigate how to leverage UKGs to support LLMs for QA. We propose Debate-on-Graph (DoG), a new framework that enables LLMs and UKGs to collaborate adaptively for reliable reasoning. Specifically, we first design a heuristic search algorithm tailored for UKGs to extract reliable and question-relevant subgraphs, thereby reducing noise and errors in retrieved knowledge. We then introduce a Multi-Agent Debate mechanism, which yields reliable answers through adaptive adversarial debates, aiming to fully exploit the knowledge in UKGs while preserving the reliability of retrieved evidence. Extensive experiments on four benchmark QA datasets show that DoG achieves state-of-the-art performance over existing LLM reasoning methods and KG-based baselines, while enabling reliable and adaptive reasoning. Our code is available at https://github.com/seucoin/Debate-on-Graph.

Logical Multi-Hop Query Answering over Knowledge Graphs (KGs) can be formulated as querying, with an implicit completeness assumption. Current works mainly focus on Existential First Order Logic (EFO) queries. These EFO queries contain conjunction, disjunction, and negation operators. Most existing works employ transductive reasoning, meaning they are not capable of reasoning over entities unseen during training. In the real world, there is a resource scarcity, and we cannot train a model with all the nodes of a large KG. Hence, we propose InductWave, a wavelet-based inductive embedding method for logical query answering on large KGs. Here, the training graph consists of fewer nodes than the test graph. Our model performs on par with the baseline models while having half the number of message-passing layers. It outperforms all of them in most cases, with 75% of the layers. These fewer resource requirements enable us to evaluate InductWave on massive graphs, such as Wiki-KG. We test our model using extensive experiments across varying train-test graph proportions of the FB15k-(237) dataset, comparing it with the state-of-the-art models. The code and datasets for the model are available at https://github.com/kracr/inductwave/.

Multi-hop Question Answering over Knowledge Graphs faces a critical challenge: traditional retrieve-then-read pipelines break differentiability, preventing the retriever from learning to bridge the semantic gap where intermediate nodes lack lexical overlap with the query. To address this, we propose RSF-GLLM, a framework decoupling differentiable graph reasoning from answer generation. Our Recurrent Soft-Flow (RSF) module employs a GRU-guided query updater to propagate continuous relevance scores, utilizing a dynamic gating mechanism to traverse semantically dissimilar bridge nodes via structural cues. We introduce flow sparsity regularization to theoretically guarantee convergence from soft probabilities to discrete reasoning paths. These paths are extracted and textualized to fine-tune a Large Language Model (LLM), ensuring generation is grounded in factual topology. Experiments on WebQSP and CWQ demonstrate that RSF-GLLM achieves competitive performance with superior inference efficiency compared to LLM based computationally expensive approaches.

Multimodal Large Language Models (MLLMs) have demonstrated strong perception and reasoning capabilities. However, most existing models focus on isolated objects and neglect structured relationships for efficient target navigation, limiting their performance on visually intensive tasks. To address this challenge, we introduce Scene Graph Thinking (SaGe), a novel paradigm that enables fine-grained and structured visual reasoning through explicit scene-graph representations. Specifically, we first introduce an automated data engine that converts flat image-text corpora into structured scene graphs, where hierarchical entities constitute the nodes and diverse visual relations define the edges. Building upon this, we construct 120K high-quality training data by sampling reasoning traces from scene graphs. Then, two-stage graph-aligned post-training paradigms are introduced, where supervised fine-tuning internalizes MLLMs with structured reasoning, and subsequent reinforcement fine-tuning proposes node-as-proxy graph rewards to consolidate efficient graph exploration. With curated data and graph-aligned training, our approach achieves significant improvements across eight multimodal benchmarks, demonstrating strong effectiveness on fine-grained perception and reasoning tasks. Code is available at https://github.com/zwyang6/SaGe.

Graphs are widely used to model relational systems, with applications in domains such as social networks, finance, and biomedicine. Graph neural networks (GNNs) have become a mainstream approach for learning graph representations. With the rise of large language models (LLMs), recent studies have attempted to combine GNNs with LLMs. However, most existing works concentrate on node-level and edge-level tasks, while graph-level tasks, which require capturing more complex structural and feature information, remain relatively underexplored. Moreover, graph pretraining is a widely adopted strategy to alleviate the challenge of label scarcity. Most existing approaches are designed solely for GNNs such as GraphCL, leaving LLMs uninvolved in the process. To address these limitations, we propose GLIP, a Graph-LLM JoInt Pretraining framework for graph-level tasks. GLIP first performs graph augmentation to construct positive and negative pairs and introduces a multi-token selection strategy to identify patches informative in both structure and features. It further leverages a diffusion-based projector to enrich them with contextual information, enabling GLIP to capture signals from both global and local perspectives. Finally, GLIP employs a joint objective that integrates the LLM's semantic judgments with a contrastive alignment loss, ensuring consistent supervision at both the semantic and structural levels. After pretraining, GLIP is fine-tuned with limited labeled data for downstream tasks, and extensive experiments show that it outperforms state-of-the-art methods on graph-level classification and reasoning tasks. Our source code is publicly available at https://anonymous.4open.science/r/GLIP.

In this paper, we introduce position graphs, a graph-based reasoning framework based on the formalization of position spaces. This framework utilizes two strict partial orders, representing horizontal and vertical alignment and precedence, to model the relative positions of discrete tokens. Unlike general qualitative spatial calculi, position graphs are constrained by a chain condition and compatibility requirements that focus on rows and columns. We provide a comprehensive theoretical analysis of this representation, beginning with a characterization of graph consistency. Conditions to ensure the consistency of position graphs are established. Furthermore, we investigate the computational complexity of structural pattern discovery, modeled as the induced subgraph isomorphism problem. We demonstrate that this problem remains NP-complete even within the restricted class of position graphs. While initially motivated by document processing, this work focuses on the underlying mathematical properties and algebraic consistency of position-based constraints, providing a formal logical layer that is independent of specific data extraction techniques.

Large Language Models (LLMs) demonstrate remarkable potential in dynamic graph reasoning, but suffer from a scaling bottleneck: current models can only handle graphs with tens of nodes, constrained by exponential reasoning overhead and finite context windows. While multi-agent systems (MAS) offer collective reasoning and topology-aware orchestration, capabilities naturally suited for graph-structured tasks, their application to dynamic graphs remains unexplored. This paper presents Scaling LLM Reasoning on Dynamic Graphs via Adaptive Spatio-Temporal Multi-Agent Collaboration (AdaSTORM), a framework that reformulates large-scale dynamic graph reasoning into two stages: (i) Adaptive Partitioning, partitioning large-scale dynamic graphs into subregions that match the model's reasoning capacity while minimizing inference cost; and (ii) Collaborative Reasoning, aligning graph partition topologies with a spatio-temporal decoupled multi-agent architecture. AdaSTORM is the first multi-agent framework tailored for dynamic graph reasoning. Extensive experiments show that AdaSTORM successfully breaks through the scaling bottleneck, scaling reasoning to thousand-node graphs with over 90% accuracy across several large-scale dynamic graph settings without external tools, significantly outperforms seven competitive baselines. Furthermore, it achieves state-of-the-art accuracy on existing benchmarks and generalizes robustly to real-world datasets. The source code is available at: https://github.com/irisorchid107/AdaSTORM/.

Provenance-enhanced statements of the form "according to $X$, $\varphi$" are pervasive in contemporary knowledge graphs, especially in domains where graph content primarily represents claims, interpretations, and hypotheses (\emph{capta}) rather than observer-independent facts (\emph{data}). Current provenance models can record who asserted what, but they typically treat provenance as semantically neutral, leaving underspecified how attributed claims relate to factual commitment, to one another, and to reasoning. In this paper we introduce DEC, a framework that interprets provenance predicates as indicators of epistemic stance and groups provenance-homogeneous sets of statements into \emph{cognitive worlds}. Drawing on cognitive modal logics (doxastic, epistemic, and conjectural), DEC characterizes locality, rationality, and controlled permeation between cognitive worlds and a distinguished factual core ("reality"), thereby enabling principled reasoning over attributed content without collapsing disagreements into inconsistencies. We formalize a DEC interpretation for RDF datasets that is conservative over RDF~1.2 semantics, clarify the role of intensionality and identity (including the Superman paradox), and illustrate the approach on common Semantic Web representations (named graphs, quoted triples/RDF-star, and reification). Finally, we describe our prototype DEC reasoner implemented as a Fuseki dataset module, supporting controlled factualisation and explicit detection of disagreements and delusions.

Property graphs may be constrained by schemas that inform both query engines and human users about the shape of valid data, enforcing a contract between data provider and consumer. Composable property-graph queries transform input graphs into output graphs. Then, the question arises of which schema can be expected after one (or several) transformation steps. We investigate how schema constraints can be inferred given an input schema and a transforming query. Specifically, we propose a reasoning procedure that, given an input schema in ProGS and a query in G-CORE infers an output schema. Since graph updates will happen frequently, our inference procedure does not rely on graph instances, such that the computed output schema applies to all graphs originating from any input graph complying with the input schema. Related work has addressed this problem for SPARQL CONSTRUCT queries, encoding it in Description Logics (DLs) so that the output schema is entailed by axioms inferred from input schema and queries. Property graphs and their queries, however, complicate the matter, as property graphs feature label and property annotations as well as first-class edges. Thus, reification has to be used in one way or another, though available DLs lack the means to encode such features directly. We approach this novel challenge via a family of mappings for i) property graphs reified in RDF, aligned with ii) a mapping from ProGS to SHACL and iii) a mapping from G-CORE to SPARQL CONSTRUCT queries. In this manner, schema inference for property graphs becomes manageable, as we break apart the problem through the extra mapping layer and utilize efficient DL reasoners. We develop the metatheory regarding the soundness of inferred schema constraints and the semantic equivalence of mapped schemas and queries.

Automating compliance check for geometry-intensive regulations remains a significant technical bottleneck in Building Information Modeling (BIM), primarily due to the semantic disparity between high-level regulatory logic and structured IFC data. Existing methods, often reliant on static rule templates, struggle to traverse multi-hop reasoning chains or resolve latent spatial dependencies across multiple building entities. To address these challenges, a Spatial-Geometric Reasoning System for Building Information Modeling (SGR-BIM) is proposed as an integrative graph-driven reasoning framework. SGR-BIM dynamically constructs a cross-modal knowledge graph that aligns user intent, regulatory semantics, and BIM geometry, enabling interpretable reasoning without rigid hard-coding. Validated on 679 expert-verified queries from fire safety codes, the framework achieves 84.3% accuracy, representing an 8.6% improvement over enhanced-tool single-agent baselines. This research provides a graph-based semantic reasoning paradigm, enhancing the transparency and flexibility of automated geometric compliance check workflows in the Architecture, Engineering, and Construction (AEC) industry.

Graph analysis underlies many applications whose answers cannot be looked up in a single record or retrieved along a path: laundering rings, drug repurposing, user preference, and scientific theme are all inferred from a node together with its neighbourhood. We introduce GraphInfer-Bench, a benchmark for whether LLMs can perform this graph inference: producing an open-ended answer that no single node supports and no path retrieves. Existing graph-QA protocols cannot test this capability: algorithm simulation, node classification, single-node description, KG-QA, and GraphRAG all admit answers retrievable from one node or along a path. GraphInfer-Bench defines five tasks along Description (what a region is) and Comparison (how regions differ), each constructed so the ground truth lives in no single node. The release contains 42,000 samples across six real-world graphs, produced automatically and screened by a four-layer quality-control protocol. We evaluate four method families against the same tasks: graph-token alignment models, zero-shot frontier closed-source LLMs, Graph2Text supervised fine-tuning, and plain GNNs as a structural reference. No method family closes the gap. Graph-token alignment partially handles description tasks (relational, theme) but collapses on comparison tasks. Frontier LLMs lead on outlier detection and community partition among LLM-based methods but lag on masked-node prediction. Graph2Text SFT is the strongest LLM-based method on the description side yet falls behind frontier LLMs on comparison. Across every task, plain GNNs match or beat the strongest LLM-based row, with the largest margin on community detection. GraphInfer-Bench surfaces graph inference as an open capability gap rather than a property of any one architecture.

Kubernetes incidents are diagnosed reliably only when a root-cause system's reported gains come from incident evidence rather than scenario-specific shortcuts. We present Graph Traversal Agent, a graph-guided RCA agent that combines LLM reasoning with specialized tools. The model reasons over a typed evidence graph, while deterministic graph and tool operations collect evidence, bound the search, and check proposed verdicts. We map operational constraints, including read-only evidence collection, propagation-aware diagnosis, bounded execution, and independently validated verdicts, to a typed incident graph, a LangGraph traversal state machine, and a separate validation stage. On ITBench snapshots scored by one fixed qwen-plus judge, the audited system raises root-cause-entity F1 over an earlier iteration of the same system from 0.6087 to 0.9130 on a 23-scenario common subset. A prompt-level ablation separates prompt-tuned gains from gains that survive once scenario-specific hints are removed: the stripped-prompt configuration retains 0.6958 F1 on a 19-scenario subset. The surviving gain concentrates on ChaosMesh scenarios whose ground-truth root cause is the injected fault object already present in the evidence graph, so we report it as benchmark-coupled rather than broad cross-cluster RCA evidence. Lightweight checks, including same-judge comparison, prompt-level ablation, cascade-source checking, and a telemetry no-leak test, mark claims as supported, pending, or out of scope. We scope the work to ITBench OpenTelemetry-demo snapshots. Live-cluster trials served as an engineering stress test, but alert state and trace availability did not stay stable enough for controlled scoring, so we make no production-readiness or mean-time-to-repair claim.

Large language models (LLMs) have been increasingly explored for graph computation, where tasks require reasoning over structured relationships and algorithmic operations. Yet, it remains unclear when LLMs can reliably support such computation and how they should be incorporated into graph-solving pipelines. Existing surveys at the intersection of LLMs and graphs primarily focus on graph learning, text-attributed graphs, or graph-language modeling. To bridge this gap, we provide a comprehensive review of LLMs for graph computation through a role-based taxonomy. Specifically, we identify two major paradigms: i) LLMs as executors, where models directly solve graph tasks from graph descriptions and instructions; and ii) LLMs as planners, where models formulate problems, decompose reasoning steps, and invoke external tools or agents for execution. Based on this taxonomy, we analyze the strengths and limitations of current methods. Our review indicates that LLMs are promising for simple, small-scale tasks, but remain unreliable for large-scale and exactness-demanding tasks. Finally, we summarize available datasets and suggest four future directions.

Open-vocabulary object detection seeks to identify novel object categories that were not part of the training data. Many knowledge distillation-based approaches have shown promising performance by transferring knowledge from pre-trained vision-language models to object detection. However, these methods often overlook structured, image-specific relationships between objects, such as interactions and spatial arrangements. This oversight can significantly restrict the effectiveness of detecting novel categories. To address this issue, we propose a Scene-guided Relational Modeling detection framework. This framework utilizes scene graphs to capture structured semantic and spatial relationships between candidate regions and their contextual objects. It explicitly models interactions among neighboring regions and incorporates a Relation Attention Module to implicitly amplify the key relational cues extracted from the scene graph. Furthermore, we present a scene-based textual alignment branch that distills category knowledge from captions to guide relational alignment. This approach facilitates a seamless integration of visual relations with semantic information for enhanced detection performance. Comprehensive experiments show that our model achieves superior performance compared to other OVOD methods, improving the AP for novel categories on COCO and LVIS datasets.

Underground coal mining requires personnel and heavy equipment to operate within shared, confined, and poorly illuminated spaces where hazards such as equipment proximity violations, structural instabilities, and occluded blind spots are difficult to anticipate. Conventional monitoring systems, including fixed cameras and rule-based proximity alerts, can detect predefined events but lack the 3D scene understanding and contextual memory needed to identify complex or evolving hazards. This paper presents a continuous monitoring framework that converts colourised 3D point clouds into structured and traceable safety reasoning outputs. The framework combines 3D semantic perception, uncertainty-based anomaly detection, rule-based hazard checks, on-device LLM reasoning, and GraphRAG -based memory analysis to identify immediate hazards and interpret longer-term safety patterns. Scene and temporal graphs serve as the explicit knowledge structure, linking perception outputs across reasoning stages. To overcome the scarcity of labeled underground data, real roadway scans, controlled object placement, and high-fidelity longwall simulation were combined to generate diverse hazard scenarios, while self-supervised pretraining improved segmentation from limited annotations. The perception model achieved 92.7% accuracy at 30 FPS with low memory usage. Across 115 hazard scenarios, rule-based checks achieved 57% coverage, increasing to 76% with contextual LLM reasoning and 93% with memory-based reasoning using historical records. Qualitative results show uncertainty-derived anomaly signals support the interpretation of out-of-distribution hazards beyond predefined classes. Overall, graph-based knowledge representation combined with 3D perception and layered safety reasoning provides a practical foundation for intelligent decision support in underground mine monitoring.

Large language models (LLMs) are increasingly used as self-study assistants in technical disciplines, yet their reliability as mathematical reasoning assistants remains poorly understood. We introduce GTBench, a curriculum-grounded benchmark for evaluating LLMs as mathematical research assistants in graph theory, comprising 63 problems organized into three groups of increasing difficulty: undergraduate definitions and basic properties (Group 1), algorithm tracing and structural reasoning (Group 2), and graduate-level proof construction (Group 3). Problems are sourced from verified academic materials including Diestel's Graph Theory. We evaluate five frontier models -- GPT-5, Claude Sonnet 4.6, Gemini 2.5 Flash-Lite, Llama 3.3 70B, and Mistral Large 3 -- under zero-shot and chain-of-thought prompting, using exact-match and LLM-as-judge evaluation for Groups 1 and 2, and a hybrid human expert and LLM-as-judge protocol for Group 3. Our results reveal a pronounced performance hierarchy: GPT-5 approaches ceiling on Group 1 (95.8% zero-shot) and maintains meaningful accuracy on graduate proofs (82%), while all other models degrade substantially with difficulty, with Llama achieving 0% under human evaluation on Group 3 zero-shot. Failure mode analysis shows that correct algorithm, wrong execution errors dominate Groups 1 and 2, while Group 3 additionally surfaces incomplete reasoning failures and reveals systematic disagreement between human evaluators and the automated judge, particularly on verbose or near-complete proofs (kappa = 0.48-0.83 across human pairs). GTBench provides the first curriculum-grounded evaluation framework for graph-theoretic reasoning in LLMs, with direct implications for the governance of AI tools in mathematical education and scientific research.

Relational reasoning lies at the heart of intelligence, but existing benchmarks are typically confined to formats such as grids or text. We introduce GraphARC, a benchmark for abstract reasoning on graph-structured data. GraphARC generalizes the few-shot transformation learning paradigm of the Abstraction and Reasoning Corpus (ARC). Each task requires inferring a transformation rule from a few input-output pairs and applying it to a new test graph, covering local, global, and hierarchical graph transformations. Unlike grid-based ARC, GraphARC instances can be generated at scale across diverse graph families and sizes, enabling systematic evaluation of generalization abilities. We evaluate state-of-the-art language models on GraphARC and observe clear limitations. Models can answer questions about graph properties but often fail to solve the full graph transformation task, revealing a comprehension-execution gap. Performance further degrades on larger instances, exposing scaling barriers. More broadly, by combining aspects of node classification, link prediction, and graph generation within a single framework, GraphARC provides a promising testbed for future graph foundation models.

AI Scientists have shown promising progress across multiple stages of the research pipeline, among which automatic scientific paper writing remains a formidable challenge. The Introduction writing is especially challenging, which demands not only linguistic fluency, but logical soundness and verifiable faithfulness. Most AI-assisted methods treat the task as text generation instead of reasoning and structuring, leading to severe drawbacks, e.g., hallucinating citations. To address this, we first formulate the Content-Conditional Introduction Generation (CCIG) task, which requires grounding the Introduction in the paper's core evidence. We then propose LECTOR, a novel Logic-Expression Co-Reinforcement Learning framework that can strictly follow the scientist's logic, add high-quality citations and keep structured expressions. LECTOR first constructs a logic-reasoning graph from the paper's main body to serve as a verifiable logical blueprint. Subsequently, it employs a Logic-Expression Co-Rewarding mechanism to jointly optimize for both the graph's structural fidelity and the final narrative's quality. We conduct a dataset from Nature Communications papers to assess our method. Extensive experiments show consistent improvements in both logic fidelity and Introduction generation quality metrics, e.g., Graph Quality (+26.7%), Citation Quality (+8.6%), and Paper Consistency (+3.3%). Code and data are available at https://github.com/Xiao-Youth/LECTOR.

Graph reasoning agents operating from natural-language inputs must solve a coupled problem: they must reconstruct a structured graph instance from text, decide whether existing computational assets are sufficient, interact with tools under a strict execution protocol, and satisfy an external verifier that checks structured correctness rather than textual plausibility. Existing approaches usually improve either the instruction side or the tool side in isolation, which leaves unclear what should be updated after failure. We propose EGL-SCA, a verifier-centric dual-space framework that models a graph reasoning agent using two collaborative components: an instruction-side policy space for reasoning strategies, and a tool-side program space for executable algorithmic tools. Our central mechanism is structural credit assignment, which maps trajectory evidence to conditional updates, precisely routing failures to either prompt optimization or tool synthesis and repair. To provide sufficient learning signals for dual-space adaptation, we introduce a training distribution stratified by task family, coupled with a Pareto-style retention strategy to balance success, generality, and parsimony. Experiments on four graph reasoning benchmarks show that EGL-SCA achieves a state-of-the-art 92.0% average success rate. By effectively co-evolving instructions and tools, our framework significantly outperforms both pure-prompting and fixed-toolbox baselines.

Reasoning-acting frameworks enhance large language models (LLMs) by interleaving reasoning with actions for dynamic information acquisition. However, extending this paradigm to graph learning remains underexplored. Graph data is inherently structured, with information distributed across nodes and edges and encoded through both topology and latent representations. As a result, effective reasoning over graphs requires not only retrieving informative evidence from the graph, but also progressively refining the accumulated context during multi-step inference. In this work, we propose GraphReAct, a graph reasoning-acting framework that enables step-by-step inference over graph-structured data. Specifically, we design a graph-based action space with two complementary retrieval actions: topological retrieval, which captures local structural dependencies, and semantic retrieval, which accesses non-local but relevant evidence in the representation space. These actions dynamically expand the reasoning context. To further support multi-step reasoning, we introduce another type of action, context refinement, which distills and reorganizes accumulated information into a compact representation. By interleaving reasoning with both retrieval and refinement actions, our framework enables a progressive transition from context expansion to compression. Extensive experiments on six benchmark datasets demonstrate that GraphReAct consistently outperforms state-of-the-art methods, validating the effectiveness of reasoning-acting for graph learning.