Entities

As large language models are increasingly deployed in sensitive domains, anonymizing input data to protect personally identifiable information has become a critical practice. However, the impact of this anonymization on model utility is not well understood. This paper presents a systematic empirical study of the trade-off between privacy and performance. We evaluate five prominent language models across eleven diverse benchmarks, comparing their performance on original versus pseudonymized inputs. Our results reveal that while anonymization generally degrades performance, the effect is highly nuanced. We find that more capable models, such as Qwen2.5-72B and GPT-4o mini, suffer the largest performance drops, suggesting a stronger reliance on specific entity information. The impact is also task-dependent: performance on TruthfulQA improves with anonymization, while retrieval-focused tasks like RGB experience a catastrophic decline. Further experiments show that reversible anonymization techniques that preserve entity uniqueness significantly outperform irreversible ones like redaction, and that explicitly prompting models about anonymization offers no discernible benefit. We conclude that anonymization is not a one-size-fits-all solution and must be co-designed with the model and task in mind to balance privacy and utility effectively. Our findings provide a crucial baseline for developing more robust, privacy-aware AI systems.

Coreference resolution is an important task in contextual reasoning. In this paper, we investigate the mechanism for representing and retrieving singular and plural entities for plural reference. We use a combination of mechanistic interpretability and attention pattern analysis to study the process in which LLMs predict a pronoun to refer back to previously mentioned entities. Using a range of causal intervention techniques, we find a set of attention heads that are responsible for (1) representing coreference information in the input, (2) identifying entities that form a plural reference, (3) transferring the information to the component that is responsible for selecting the antecedents and predicting the pronoun. We also find that LLMs align with humans in preference for plural pronoun. Specifically, entities in a plural construction are more likely to be referred to as a plural entity if they are ontologically similar and are linked by the conjunction "and".

Incremental Named Entity Recognition (INER) stands as a pivotal task in information extraction, emphasizing the successive identification of new entity types within unstructured text. Faced with the continuous influx of entity types, INER grapples with two significant challenges: the widespread issue of catastrophic forgetting and the unique shift issue of the non-entity type semantics. While pseudo-labeling-based INER methods have proven effective in addressing these challenges, a previously overlooked issue arises: the biased context problem. Our analysis shows that, in new sentences, the contextual associations of tokens representing old entity types exhibit a significantly stronger bias towards new entity types compared to their contexts in old sentences. This tendency intensifies the degradation of old knowledge while promoting the overfitting of new knowledge. To solve this biased context, we propose a Type-Balanced Contextual Learning (TBCL) method, featuring a sentence-duplet learning scheme and a contextual consistency loss. This approach offers a fresh perspective for INER through context analysis. Extensive experiments across ten INER settings on three highly recognized datasets showcase the efficacy of our TBCL method, highlighting its proficiency in resolving the biased context issue inherent in pseudo-labeling based INER approaches.

Scientific named entity recognition (SciNER) plays a crucial role in information extraction and knowledge discovery from scientific texts. Recently, large language models (LLMs) have demonstrated the capacity to achieve competitive SciNER performance with minimal human effort. Existing research highlights the importance of incorporating candidate entity type information for accurate entity recognition and classification by LLMs. However, when too many candidate entity types are provided in the prompt, LLMs struggle to accurately recognize and label entities in scientific texts, where entity types are more complex than in general domains. To address this challenge, we propose TdSciNER, a type-driven approach that effectively leverages entity type information to enhance SciNER performance. In TdSciNER, we first design an entity type filter model to identify the most likely entity types present in a given sentence. Subsequently, we introduce an auxiliary multi-class entity typing task within a multi-task learning framework alongside SciNER to obtain richer contextual representations. Then, we develop a novel demonstration selection strategy based on sentence similarity and entity type diversity to activate the in-context learning capabilities of LLMs, thereby improving entity recognition accuracy across diverse scientific domains. Experiments on three datasets demonstrate that our method achieves performance comparable to fully supervised models. Further analysis validates that each entity type-driven component in TdSciNER contributes to the improvement of SciNER performance. This work provides valuable insights for future advancements in SciNER and broader information extraction tasks in scientific text mining.

Tool-augmented LLM agents can harbor implicit state that persists across sessions, activates through events, and propagates across agent boundaries---largely invisible to standard debugging. We formalize this as Persistent Semantic Entities (PSEs): constructs defined by name binding, event triggering, and cross-boundary propagation, and evaluate them across 24 models from 11 families (1.5B--1T parameters). First, every tested model is susceptible (20--100% on the 20-model susceptibility panel), with name binding as the necessary and dominant mechanism: without it, contamination is 0%. Second, persistence depends on contamination type rather than scale or deployment: preference contamination persists undecayed on every model probed (100% at t=10) and instruction contamination persists wherever adopted, persona-style injection decays partially (90%$\to$10%), while factual injection is model-dependent---self-corrected on Llama-3.1-8B and GPT-4o-mini but held at ceiling on both Qwen2.5-coder variants, so we do not claim it self-corrects in general. The preference and instruction results hold across providers in our controlled setting. Third, context-isolated self-verification achieves 20--79% reduction (median 36.5%) without oracle references while keyword-based detection produces systematic false positives, and contamination compounds 1.9$\times$ along a four-stage agent pipeline (40%$\to$75%). Preference and instruction contamination---persistent, lacking self-correction, and poorly captured by standard monitoring---represent a particularly concerning attack surface for deployed agent systems.

Biomedical entity linking grounds mentions in clinical and scientific text to entities in a curated knowledge base (KB) with ontological structure, which supports downstream applications such as literature-scale information extraction and patient-record normalization. The task has several challenges at once: the KB contains large numbers of entities, mentions are often ambiguous, and gold labels follow annotation conventions specific to each corpus. To address these challenges, we propose PILOT, a three-stage framework made up of neighborhood-aware retrieval, dual reranking, and score fusion. The retriever injects ontological structure from both the query and KB side, by reformulating mentions and pooling entity embeddings. The retrieved pool is then scored from two complementary views, one over surface forms and one over context, and fused together. PILOT achieves the state of the art on average across five widely-used benchmarks and remains efficient at inference.

Multimodal named entity recognition (MNER) determines whether each candidate span and entity-type hypothesis is supported by joint textual and visual evidence. Existing imagine-and-compare verifiers map each (span, type) pair to one predicted visual feature, compressing diverse visual realisations into a single prototype and providing a compatibility score without explicit probabilistic semantics. We introduce DiffImaginE, which formulates MNER type verification as conditional latent diffusion inference. Given span-localised visual evidence, a type-conditioned denoiser predicts noise injected into its standardised latent. The resulting denoising error provides an ELBO-consistent surrogate for type-conditional negative log-likelihood, allowing competing type hypotheses to be ranked by how well they explain the observation. DiffImaginE retains a standard multimodal encoder stack and replaces the deterministic verifier with a classifier-free-guided diffusion scorer trained using Min-SNR weighting. We directly supervise per-type diffusion scores as classification logits, learn aggregation across noise levels, and use antithetic sampling to reduce Monte Carlo comparison variance. Our analysis shows that classifier-free guidance sharpens the induced type posterior and characterises when antithetic pairing reduces variance at equal denoiser cost. Experiments on Twitter-2015 and Twitter-2017 show consistent gains over a matched deterministic ImaginE control under the same encoder, auxiliary objectives, and evaluation protocol, supported by ablations and paired significance tests.

Entity linking in tables matches short and ambiguous cell mentions to their corresponding knowledge-base entities. Existing approaches typically rely on data preprocessing pipelines that retain either compact or extensive table content as contextual evidence, and then formulate entity linking as a language generation task for instruction-tuned models; recent systems further incorporate explicit reasoning to disambiguate challenging mentions. However, their training supervision is usually static: fixed preference data cannot adapt to the residual errors of an evolving model, while variations in reasoning length can bias sequence-level preference learning. To address these limitations, we present TELLER: Table Entity Linking through Learning from Errors and Reasoning. We first retrieve and rank Wikidata candidates and retain reduced table evidence in the prompt. The direct-answer path applies iterative direct preference optimization and refreshes its preference data with residual errors from the updated model. The reasoning path uses filtered and compressed chain-of-thought rationales for supervised fine-tuning, followed by our iterative length-normalized regularized preference optimization. On the TableInstruct entity-linking subset, the direct-answer path improves accuracy from 94.35% to 94.50%; on the MammoTab V2 evaluation set, it improves accuracy from 87.59% to 88.20%. The reasoning path improves accuracy from 92.90% to 92.95% on TableInstruct and from 79.09% to 81.85% on MammoTab V2, while maintaining high rates of complete reasoning generation. These results show that iterative preference learning benefits both concise entity prediction and explicit reasoning.

Temporal heterogeneous graphs offer a natural abstraction for dynamic relational systems in which diverse node and relation types co-exist and evolve over time. Learning on such graphs requires jointly modeling cross-type structural heterogeneity and the temporal dynamics of interactions, yet existing methods still struggle to reconcile parameter-efficient cross-type transfer with relation-aware specialization, and typically inject time only as additive features outside the attention kernel. We propose \textbf{THGFM}, a web-scale temporal heterogeneous graph fusion model that addresses both limitations within a unified dual-path architecture. THGFM couples a \textit{Shared-Space Temporal Attention} branch for parameter-efficient cross-type transfer with a \textit{Relational Type-Partitioned Temporal Attention} branch for relation-aware specialization, and integrates them through \textit{Dual-Path Relational--Shared Fusion}, instantiated with \textit{Type-Conditioned Non-Competitive Gated Sum Fusion}: a adaptive mechanism that assigns independent, type-conditioned feature-wise gates to the shared and specialized branches, allowing both to be amplified or suppressed without zero-sum competition. To directly incorporate relative time into the attention score, THGFM further introduces \textit{Rotary Temporal Attention}, which rotates queries and keys by half-phases of relative time before matching. THGFM consistently outperforms baseline graph transformer models on academic graphs benchmarks, delivering a $+3.25\%$ six-task mean gain, with peak relative gains of $+12.37\%$ on OAG-CS PV, $+4.87\%$ on PF-$L_2$, and $+1.18\%$ on PF-$L_1$, and $+4.24\%$, $+3.73\%$, and $+4.61\%$ on OGBN-MAG, HTAG-ArXiv, and HTAG-DBLP, respectively.

Entity alignment (EA) identifies entities across knowledge graphs (KGs) that refer to the same real-world object. Conventional EA methods mainly exploit explicit graph structures and textual fields, which often provide insufficient semantic understanding to recognize the same entity under heterogeneous descriptions and distinguish it from semantically similar entities. Although large language models (LLMs) offer deeper entity understanding, existing LLM-based EA methods largely use this capability for auxiliary generation or candidate-conditioned decisions. Consequently, such understanding is not distilled into a stable and directly comparable identity space, leaving alignment tied to specific KG pairs or candidate sets and requiring repeated processing as the matching context changes. To address these limitations, we propose IRIS (Identity Representations from Internal States), a training-free framework that constructs for each entity an iris-like signature encoding its distinctive and stable identity characteristics. IRIS derives these signatures by eliciting identity-oriented contextual representations from a frozen LLM, thereby forming a shared space in which each entity is encoded once and can be aligned across different KGs through direct similarity comparison, without pair-dependent representation construction or candidate-wise LLM inference. Across four established EA benchmarks and two frozen LLM backbones, the best IRIS variants achieve Hits@1 scores of 100.00, 99.38, 98.31, and 97.99 on D-Y-15K V2, DBP-WIKI, ICEWS-WIKI, and ICEWS-YAGO, respectively.

Entity-Relationship Diagrams (ERDs) are central to conceptual database design, yet they are typically available only as rendered images rather than machine-readable schemas, limiting AI-assisted database engineering. We introduce ERUnderstand, the first large-scale benchmark for structured understanding of ER diagrams, comprising 2,960 diagrams collected from curated educational sources, real-world schemas, and synthetically generated examples spanning diverse domains, notations, complexity levels, and Extended Entity-Relationship (EER) constructs. Each diagram is paired with a standardized machine-readable representation for fine-grained evaluation of schema elements. Evaluating state-of-the-art Vision-Language Models (VLMs), we find that while common ERD elements are recovered reliably (F1 > 0.74), performance drops sharply on weak entities (as low as 0.28 F1), multivalued attributes (0.14 F1), and N-ary relationships (0.07 F1). Reasoning-augmented models improve overall performance by 15-25% but remain sensitive to linguistic priors and increasing diagram complexity. ERUnderstand provides a standardized benchmark for evaluating multimodal understanding of conceptual database schemas. The benchmark, dataset, evaluation toolkit, and generation code are publicly available at https://github.com/salinaria/ERUnderstand.

Automated fulfillment warehouses must continuously assign and execute pickup-and-delivery work while avoiding congestion. In many-to-many Multi-Agent Pickup and Delivery (MAPD), a request specifies a stock-keeping unit rather than fixed endpoints, requiring the controller to select an agent, source, and destination before path planning. Existing graph-guidance methods primarily influence routing after goals are fixed, leaving endpoint instantiation uninformed by recent traffic. We introduce Stigmergic Graph Memory (SGM), a bounded, decaying memory layer that records recent execution signals on warehouse nodes and directed edges to rank feasible endpoints and route preferences without altering collision constraints or planner validity. Across paired request streams on five layouts, three load levels, and 25 seeds per condition, SGM outperforms two reconstructed many-to-many allocation baselines in all 15 map-load conditions, with paired throughput gains of 20.5-36.7%. These results show that recent execution memory can improve warehouse throughput by shaping which feasible goals enter the planner, not only how agents travel to already fixed goals.

Retrieval-augmented generation evaluation checks whether model claims are factually grounded in retrieved documents. It does not check whether retrieved evidence is attributed to the correct entity. A clinical RAG response can pass every automated check (zero hallucinations, near-perfect faithfulness, real citations) while presenting drug Y's clinical evidence as evidence about queried drug X. We term this deceptive grounding (DG): a failure invisible to faithfulness, hallucination, and citation checks because every claim is sourced from a real document, about the wrong entity. Using a controlled factorial benchmark across 13 models, we find DG rates spanning 8-87% at peak adversarial conditions. Medical and biomedical fine-tuned models reach up to 86.7%; domain specialization amplifies the failure rather than mitigating it. A controlled ablation identifies the mechanism: removing entity-specific clinical evidence from retrieved documents eliminates entity-attribution failure entirely, shifting all failures to confabulation. The two failure modes respond to the same trigger, taking different paths. Production measurement across 740 drug-disease pairs finds 7.8% overall DG in a deployed RAG system, rising to 13.6% for recently approved drugs. Entity-attribution verification (checking that cited evidence applies to the queried entity) detects DG at 97.0% precision and 98.7% DG recall (IPW-adjusted human gold standard); no existing framework implements it.

In this work, we reviewed different approaches in mathematical modeling of biologically plausible neural systems. Models are characterized and classified based on their common features and special use cases. In addition to spiking models, different types of discrete and continuous analogs are considered to accurately simulate biological processes, including membrane potential dynamics. The models under investigation include neurons and various components encountered in neural systems and affected the dynamics. The selection of specific approaches was driven by their prevalence and innovative perspectives in order to enhance the relevance of the presented information.

Identifying and grounding precise geometric entities, such as edges, planar regions, and curved surfaces within 3D objects, is foundational to computer-aided design (CAD), robotic manipulation, and scientific simulation. Although modern Vision Language Models (VLMs) have advanced referring segmentation (RIS) in the image domain, extending such language-driven localization to structured 3D geometry is substantially harder. The 3D object appearance is highly sensitive to viewpoints; a single perspective may render a target entity clearly observable, while another may suffer from severe occlusion or foreshortening. In this work, we attempt to solve these challenges with MV-GEL (Multi-View Geometric Entity Localization), a framework for localizing fine-grained geometric entities on polygon meshes from natural language queries. Our key insight is that reliable CAD entity (i.e., faces, edges or solids) localization depends on selecting views that make the queried entity maximally interpretable. We introduce GELviews, a prompt-conditioned ranking module that prioritizes viewpoints based on language prompted observability of geometric CAD entities. Selected views are processed by a VLM-based reasoning segmentation backbone, and predicted masks are lifted to the corresponding meshes via geometry-aware ray casting. Our framework is completely CAD agnostic and relies only on 3D meshes. Experiments show up to a 1.7X improvement in face-level IoU and over 4.5X gains in edge-level F1 compared to vanilla baselines, substantially outperforming CLIP-based and random view sampling, particularly for thin and view-sensitive structures.The dataset, code and trained checkpoints are available at https://github.com/kbali1297/MV-GEL.

The composition of author teams is an important factor influencing the novelty of academic papers. However, existing studies have paid limited attention to the role of institutional composition, and most novelty measures remain at a general level, making it difficult to explain the specific sources and types of novelty in papers. Taking the field of natural language processing as an example, this study investigates the relationship between team institutional composition and the fine-grained novelty of academic papers. Author teams are classified into three types: academic institutions, industrial institutions, and mixed academic and industrial institutions. Four types of fine-grained knowledge entities are extracted from full-text papers, including methods, datasets, tools, and metrics. The novelty of papers is then measured based on entity combinations, and pairwise combinations of different entity types are further analyzed to examine their contributions to novel papers. The results show that, in the field of natural language processing, collaboration between industrial and academic institutions is more likely to produce novel papers than purely industrial collaboration. From the perspective of fine-grained knowledge entities, mixed academic and industrial teams pay more attention to the novelty of method-metric combinations, whereas industrial teams pay more attention to the novelty of method-tool combinations. This study reveals the relationship between institutional team composition and paper novelty through fine-grained novelty measurement, providing useful evidence for improving paper quality and promoting industry-academia-research collaboration.

Temporal variation poses a unique challenge for named entity recognition (NER) in historical texts, where entities drift in surface form and salience across time. While language models (LMs) have made progress in various NLP tasks, their ability to reason about temporality, especially in diachronic contexts, remains limited or at least, questionable. In this paper, we systematically study how temporal metadata can be structurally embedded into NER models using a range of lightweight fusion strategies. We experiment with both absolute and relative temporal representations, injected into Transformer-based architectures via early or late fusion mechanisms such as cross-attention, adapters, and concatenation. Our evaluations on French and German historical datasets reveal that late fusion strategies yield more robust and temporally generalisable performance, particularly in early and noisy periods.

Demand forecasting at the bottom of a retail hierarchy requires predicting tens of thousands of correlated long-horizon series across products, stores, and regions. Modern systems must scale across massive catalogs, capture shared demand dynamics, and remain interpretable enough to be trusted. Classical statistical methods need a separate model per series and are hard to manage at scale; deep autoregressive models struggle as the joint state grows to tens of thousands of dimensions; and recent graph-based forecasters, while capturing cross-entity dependencies, often produce opaque long-horizon forecasts. We propose GNBAN (Graph Neural Basis Attention Network), an end-to-end architecture combining heterogeneous graph representation learning with an interpretable basis-decomposition head. Retail data are represented directly as a heterogeneous graph derived from the relational schema, so a single model serves the entire catalog. Rather than predicting the horizon directly, GNBAN decomposes each forecast into trend, seasonal, and generic components. Its key innovation is a per-basis attention mechanism: each basis function keeps its own learnable query and retrieves information independently from the entity's historical neighborhood, letting different bases specialize to distinct temporal patterns while preserving interpretability. On two large-scale benchmarks, M5 Walmart and Favorita Grocery Sales, evaluated under matched protocols, GNBAN improves volume-weighted WRMSSE by roughly 4-5% over a matched graph baseline. Qualitative analysis shows the learned decomposition exposes trend, seasonal, and residual demand drivers without post-hoc explanation methods. These results demonstrate that scalable relational forecasting and interpretable forecast decomposition can be achieved together in a unified graph-based framework.

Ultra-fine entity typing (UFET) assigns highly specific types to entity mentions, but current approaches struggle with types in the long tail. We hypothesize that a key limitation is the reliance on sentence-level context, since disambiguating evidence is often spread across multiple sentences. Testing this has been difficult because all existing UFET resources are sentence-level. We present Narrative-UFET, a controlled extension of UFET in which each entity mention is paired with an automatically generated short, coherent narrative. Synthesizing narratives lets us isolate the effect of specific discourse properties. We experiment with two paired variants: one in which the entity's type is held constant across the narrative (Maintain) and one in which it shifts (Change). We show that narrative context yields consistent improvements on long-tail types over sentence-level baselines, with the Change variant providing the stronger signal. A comparison against naturally occurring contexts shows that synthetic narratives yield stronger gains, indicating that controlled discourse construction can surface signals that real text leaves implicit. Substantial room for improvement remains, suggesting open directions in both discourse modeling and narrative construction.

Entity Matching (EM) is a core operation in the data integration pipeline, where records from different sources are compared to determine whether they refer to the same real-world entity. Recent work has incorporated domain information and low-resource learning techniques to better adapt EM systems to realistic settings. While these approaches have demonstrated strong performance, it remains unclear how they behave under varying data constraints and levels of supervision in practice. In this paper, we investigate a state-of-the-art method for low-resource, domain-aware EM--BEACON--and study how its performance is affected by different algorithmic choices and data availability conditions. We conduct a series of targeted experiments to evaluate these variations, providing deeper insight into the role of distribution alignment and the behavior of the BEACON framework.

Spatial pattern matching is the process of matching query entities and constraints with database entities and relations. It has many applications, including similar region search, housing market search, landmark search, and road network matching. To our knowledge, all existing spatial pattern matching approaches frame the problem in a 2 dimensional space, where entities lie in a cartesian plane and relationships defined between them are contained in 2 dimensions. However, this problem framing has significant limitations when searching for real world entities that have height in addition to position. To address this limitation, we extend spatial pattern matching to 3 dimensions and provide a generalized definition of the problem. We describe a subgraph matching algorithm capable of resolving 3D spatial patterns over distance relations and release two 3D spatial pattern matching datasets, one synthetic and one containing real 3D building data from the city of Hamburg, Germany. We test our subgraph matching algorithm on both datasets and present results as a baseline for future methods to build upon.

We consider an oracle that processes a limited batch of records at a time and clusters those that refer to the same real-world entity. We study how to interrogate such an oracle to resolve entities in a dataset whose size is far larger than a single batch, and where no batch is guaranteed to contain all records of any given entity. We aim at a pay-as-you-go approach, to have full control over the costs (the number of oracle consults), while achieving the highest possible recall at every step. We formally cast this problem as batched entity resolution, prove that selecting optimal batches is NP-hard, and provide an optimal solution under a natural condition on entity sizes. Finally, we evaluate our approach on six datasets and show its superiority over state-of-the-art baselines.

AI pipelines that reason quantitatively over technical text depend on input where physical quantities, numbers, units, and symbolic expressions arrive intact; when these entities fragment at tokenization, errors propagate downstream. Byte-Pair Encoding, optimized for vocabulary compression, is blind to such entities and fragments them into arbitrary subwords -- a problem aggravated in technical Brazilian Portuguese. We present TOTEN, a knowledge-based system whose input representation preserves each technical entity as a whole, typed unit: vocabulary is not derived statistically but classified declaratively under a formal ontology of engineering entities (OEE). The core is the triple <O, classify, {inst_tau}>: types, principles, and invariants; a classifier mapping raw text into typed regions; and instantiators yielding a self-descriptive representation. Integrity rests on deterministic coupling to three external authorities: Pint (dimensional), Unicode Character Database (typographic), and RSLP (Portuguese morphology). We evaluate four properties verifiable by construction -- atomicity, dimensional equivalence, typographic robustness, numerical reconstruction -- on an internal benchmark (EngQuant, N=800) and four Brazilian Portuguese external corpora (N=1771 eligible cases), and report detection recall. Against eight state-of-the-art baselines, TOTEN reaches unit atomicity in all contrasts and reconstruction of 0.775-0.904 externally vs. 0.627-0.703 for the best (Quantulum3); on EngQuant, 0.780 vs. 0.340. Differences are significant (McNemar, Holm-corrected). Spearman correlation between internal and external rankings confirms concurrent validity of the control benchmark. TOTEN shows statistical parity with Pint in dimensional equivalence. The result is a structurally faithful, auditable, low-cost input layer for intelligent systems on technical knowledge, without generative models.

Agentic AI opens new opportunities for automating Business Process (BP), enabling autonomous decision-making and dynamic adaptation. However, realising this potential requires BP entities and their interactions to be defined with formal precision. This paper presents a formal framework for Agentic BP analysis through the AGO methodology. AGO captures the modelling perspective in terms of who is acting (Agents), why it is carried out (Goals), and what the relevant entities are (Objects). Grounded in set theory and mathematical logic, we formally define the AGO entity types and their interactions, organising all definitions into a BP Knowledge Base (BPKB). The resulting BPKB supports structured querying, incremental updates, and automatic generation of BP workflows, while ensuring soundness and completeness of the derived paths.

Knowledge Graph Completion (KGC) aims at predicting missing triplets from incomplete knowledge graphs, which is crucial for downstream applications. Recently, Graph Neural Network (GNN)-based methods have achieved remarkable success by performing message passing over query-centered local subgraphs. However, in practice, a query is jointly defined by both the entity and the relation, with both carrying information indispensable for reasoning, yet these methods rely solely on the query relation as the guiding signal, while the information inherent in the query entity is not leveraged to guide inference - the entity serves merely as a structural anchor for subgraph extraction. To this end, we incorporate query entity information into the reasoning process from two perspectives: the first is structural context, i.e., the neighboring structure and relation patterns around the entity, which is encoded by a dedicated context encoder and used to modulate messages; the second is semantic type of the entity, inferred by a large language model, which is incorporated into attention computation and final scoring to provide type-level prior constraints. Together, these two sources of information enable the reasoning process to be guided by both the query relation and the query entity. Experimental results on standard benchmarks demonstrate the effectiveness of the proposed Q-GNN.

Entity tracking (ET), the ability to keep track of states, is a fundamental skill that underlies complex reasoning. An increasing amount of work investigates how transformer language models (LMs) solve entity binding $\textit{without}$ state changes. However, there is limited understanding of how non-toy LMs address ET problems of realistic difficulties expressed in natural language. To this end, we investigate the mechanisms underlying ET in more complex scenarios featuring multiple state-changing operations. We find that LMs do not incrementally track world states across tokens or query-relevant states across layers, but simply aggregate relevant information in parallel at the last token when the query becomes evident. We further investigate mechanisms of individual operations ($\texttt{PUT}$, $\texttt{REMOVE}$, $\texttt{MOVE}$) to characterize this non-incremental ET mechanism. Surprisingly, LMs implement the $\texttt{REMOVE}$ operation with a fragile global suppression tag; this global removal mechanism predicts various failure modes that we confirm behaviorally. We provide a mechanistic solution of nullifying this tag to partially address this issue. Overall, our findings reveal that LMs solve a fundamentally sequential task using a non-sequential strategy. More broadly, our work illustrates how behavioral and mechanistic analyses can fruitfully interact. Behavioral results inform mechanistic hypotheses, and insights from mechanistic analyses help build stronger behavioral evaluations by predicting failure modes missing from existing evaluations.

MedER refers to the identification of medical entities. It is crucial for extracting structured clinical information from unstructured medical text. Many existing systems rely on transformer-based models, which are computationally expensive and difficult to deploy in resource-constrained environments. Furthermore, earlier works often use relaxed evaluation metrics that artificially inflate performance by rewarding correct prediction of dominant "Outside" (O) tokens. In this paper, we propose a lightweight Medical Entity Recognition (MedER) framework for the Bangla language. We establish a rigorous baseline using a 12-layer BanglaBERT model combined with a Conditional Random Field (CRF) layer for exact-boundary entity detection. To address deployment constraints, we compress this teacher model into a 4-layer student network through Knowledge Distillation (KD), where the student learns from the teacher's pre-CRF soft emission logits. Finally, we apply INT8 dynamic quantization to further reduce model size and inference cost. Our final quantized student achieves an 8.6x CPU speedup while requiring nearly 48 percent less storage than the CRF teacher model.

Manufacturing has passed through four widely recognized paradigms - mechanization, electrification, programmable automation, and Smart Manufacturing - each defined by the kind of work it shifted from humans to machines. In every case, one layer of industrial work remained fundamentally human: the coordinative cognition of production, comprising the interpretive, allocative, diagnostic, negotiative, and governance work exercised by engineers, planners, and operational managers. We argue that a fifth transition is now underway in which this layer, rather than the physical or routine-cognitive layers below it, is what foundation-model-based autonomous agents primarily redistribute. We name this paradigm Agent Manufacturing and define it operationally: a manufacturing system is an instance of Agent Manufacturing when its principal coordination mechanism is reasoning performed by foundation-model agents that can interpret open-ended goals, plan over long horizons, invoke tools and machines, and negotiate with other agents and humans. This is a narrower and more falsifiable definition than the existing literature on cognitive manufacturing or Industry 5.0 provides, and it distinguishes the paradigm sharply from classical multi-agent manufacturing systems, which were autonomous only within closed protocol spaces.

Biomedical named entity recognition (NER) and entity linking (EL) strongly depend on annotated corpora, but the utility of these resources for benchmarking is often assumed rather than characterized. We present a corpus-centric framework for diagnosing benchmark-relevant properties directly from corpus annotations, concept links, train-test splits, document metadata, and terminology mappings. The framework organizes standardized statistics into five families: (1) scale, density and label distribution, (2) lexical and conceptual structure, (3) train-test overlap, (4) metadata composition, and (5) terminology coverage where applicable. Applying the framework to nine corpora spanning diseases, chemicals, and cell types, we find that corpus properties can differ substantially, even when they address the same apparent task. We find differences in the evaluation signal they provide, the generalization demands they impose, the degree of train-test reuse they permit, and the regions of biomedical literature and concept space they represent. These differences suggest that commonly reported corpus statistics can be insufficient to characterize what biomedical NER and EL benchmarks evaluate. We argue that corpus-centric diagnostics provide a practical framework for analyzing corpora beyond surface descriptors such as corpus size and entity type, for identifying potential transfer risks, and for interpreting the scope of benchmarking conclusions. We release the framework as open-source code with an interactive dashboard to support reproducing our analyses and characterizing additional corpora.

Open datasets and benchmarks for entity-level carbon-emission prediction remain fragmented across access, scale, granularity, and evaluation. We introduce GHGbench, an open dataset and benchmark for company- and building-level greenhouse-gas prediction. The company track contains 32,000+ company-year records from 12,000+ firms with Scope 1+2 and Scope 3 disclosures and financial/sectoral signals; the building track harmonises 491,591 building-year records from 13 open sources into a single schema across 26 metropolitan areas (10 U.S., 15 Australian, 1 Singaporean), with climate covariates and multimodal remote-sensing embeddings. GHGbench defines canonical splits with in-distribution and cross-region/city transfer as primary tasks and temporal hold-out plus short-horizon forecasting as supplementary appendix evidence; headline baselines span gradient-boosted trees, a tabular foundation model, MLP, FT-Transformer, and multimodal fusion, with an LLM panel as auxiliary, all evaluated under multi-seed paired-bootstrap tests. Three benchmark-level findings emerge: (i) building emissions are structurally harder than company emissions; (ii) the in-distribution to out-of-distribution gap dwarfs any within-model gap across both the company track and the building track, and a tabular foundation model is, to our knowledge, the first baseline to open a paired-bootstrap-significant gap over tuned trees on a multi-city building-emissions task; (iii) multimodal remote-sensing embeddings help precisely where tabular generalisation breaks. GHGbench also exposes catastrophic city transfer and the sector-factor lookup ceiling as systematic failure modes. Code and reconstruction recipes are available at GHGbench.

LLM-based agents increasingly operate in persistent environments where they must store, update, and reason over information across many sessions. While prior benchmarks evaluate only single-entity updates, MEME defines six tasks spanning the full space defined by the multi-entity and evolving axes, including three not scored by prior work: Cascade and Absence (dependency reasoning) and Deletion (post-removal state). Evaluating six memory systems spanning three memory paradigms on 100 controlled episodes, we find that all systems collapse on dependency reasoning under the default configuration (Cascade: 3%, Absence: 1% in average accuracy) despite adequate static retrieval performance. Prompt optimization, deeper retrieval, reduced filler noise, and most stronger LLMs fail to close this gap. Only a file-based agent paired with Claude Opus 4.7 as its internal LLM partially closes the gap, but at ~70x the baseline cost, indicating closure currently depends on configurations that are not practical at scale. Code and data are available on the project page: https://seokwonjung-jay.github.io/meme-eval/.

Multi-robot systems in automated warehouses must manage continuous streams of pickup-and-delivery tasks while ensuring efficiency and safety. Prior work on Multi-Agent Pickup-and-Delivery (MAPD) has largely focused on the one-to-one variant, where each task has a fixed pickup and delivery location. In contrast, real warehouses often present many-to-many MAPD scenarios, where items, tracked by stock keeping unit (SKU) identifiers, can be retrieved from or stored at multiple locations, resulting in an NP-hard four-dimensional assignment problem. To solve the many-to-many MAPD problem, we contribute our algorithm: Many-to-Many Multi-Agent Pickup and Delivery (M2M). We experiment with two variants of our algorithm: one that minimizes estimated task durations (M2M), and one which incorporates SKU distribution into the objective function (M2M-wSKU). Simulation results over 8-hour warehouse operations show that our method consistently matches or outperforms prior state of the art, with M2M completing up to 22,000 more tasks on average across different environments and warehouse inventory densities.

When people recount personal memories, they often refer to people, places, and events indirectly, relying on con-textual cues rather than explicit names. Such implicit references are central to reminiscence narratives: first-person accounts of lived experience used in therapeutic, archival, and social settings. They pose a difficult computational problem because the intended entity must be inferred from dispersed narrative evidence rather than from a local mention. We introduce IRC-Bench, the Implicit Reminiscence Context Benchmark, for evaluating implicit entity recognition in reminiscence transcripts. The benchmark targets non-locality: entity-identifying cues are distributed across multiple, non-contiguous clauses, unlike named entity recognition, entity linking, or coreference resolution. IRC-Bench comprises 25,136 samples constructed from 12,337 Wikidata-linked entities across 1,994 transcripts spanning 11 thematic domains. Each sample pairs an Entity-Grounded Narrative, in which the target entity is ex-plicitly mentioned, with an Entity-Elided Narrative, in which direct mentions are removed. We evaluate 19 config-urations across LLM generation, dense retrieval, RAG, and fine-tuning. QLoRA-adapted Llama 3.1 8B performs best in the open-world setting (38.94% exact match; 51.59% Jaccard), while fine-tuned DPR leads closed-world retrieval (35.38% Hit@1; 71.49% Hit@10). We release IRC-Bench with data, code, and evaluation tools.

We present M$^3$-VQA, a novel knowledge-based Visual Question Answering (VQA) benchmark, to enhance the evaluation of multimodal large language models (MLLMs) in fine-grained multimodal entity understanding and complex multi-hop reasoning. Unlike existing VQA datasets that focus on coarse-grained categories and simple reasoning over single entities, M$^3$-VQA introduces diverse multi-entity questions involving multiple distinct entities from both visual and textual sources. It requires models to perform both sequential and parallel multi-hop reasoning across multiple documents, supported by traceable, detailed evidence and a curated multimodal knowledge base. We evaluate 16 leading MLLMs under three settings: without external knowledge, with gold evidence, and with retrieval-augmented input. The poor results reveal significant challenges for MLLMs in knowledge acquisition and reasoning. Models perform poorly without external information but improve markedly when provided with precise evidence. Furthermore, reasoning-aware agentic retrieval surpasses heuristic methods, highlighting the importance of structured reasoning for complex multimodal understanding. M$^3$-VQA presents a more challenging evaluation for advancing the multimodal reasoning capabilities of MLLMs. Our code and dataset are available at https://github.com/CASIA-IVA-Lab/M3VQA.

Existing Natural Language Processing (NLP) resources often lack the task-specific information required for real-world problems and provide limited coverage of lesser-known or newly introduced entities. For example, business organizations and health care providers may need to be classified into a variety of different taxonomic schemes for specific application tasks. Our goal is to enable domain experts to easily create a task-specific classifier for entities by providing only entity names and gold labels as training data. Our framework then dynamically acquires descriptive text about each entity, which is subsequently used as the basis for producing a text-based classifier. We propose a novel text acquisition method that leverages both web and large language models (LLMs). We evaluate our proposed framework on two classification problems in distinct domains: (i) classifying organizations into Standard Industrial Classification (SIC) Codes, which categorize organizations based on their business activities; and (ii) classifying healthcare providers into healthcare provider taxonomy codes, which represent a provider's medical specialty and area of practice. Our best-performing model achieved macro-averaged F1-scores of 82.3% and 72.9% on the SIC code and healthcare taxonomy code classification tasks, respectively.

Multi-table entity matching (MEM) addresses the limitations of dual-table approaches by enabling simultaneous identification of equivalent entities across multiple data sources without unique identifiers. However, existing methods relying on pre-trained language models struggle to handle semantic inconsistencies caused by numerical attribute variations. Inspired by the powerful language understanding capabilities of large language models (LLMs), we propose a novel LLM-based framework for multi-table entity matching, termed LLM4MEM. Specifically, we first propose a multi-style prompt-enhanced LLM attribute coordination module to address semantic inconsistencies. Then, to alleviate the matching efficiency problem caused by the surge in the number of entities brought by multiple data sources, we develop a transitive consensus embedding matching module to tackle entity embedding and pre-matching issues. Finally, to address the issue of noisy entities during the matching process, we introduce a density-aware pruning module to optimize the quality of multi-table entity matching. We conducted extensive experiments on 6 MEM datasets, and the results show that our model improves by an average of 5.1% in F1 compared with the baseline model. Our code is available at https://github.com/Ymeki/LLM4MEM.

Language models must bind entities to the attributes they possess and maintain several such binding relationships within a context. We study how multiple entities are represented across token positions and whether single tokens can carry bindings for more than one entity. We introduce a multi-slot probing approach that disentangles a single token's residual stream activation to recover information about both the currently described entity and the immediately preceding one. These two kinds of information are encoded in separate and largely orthogonal "current-entity" and "prior-entity" slots. We analyze the functional roles of these slots and find that they serve different purposes. In tandem with the current-entity slot, the prior-entity slot supports relational inferences, such as entity-level induction ("who came after Alice in the story?") and conflict detection between adjacent entities. However, only the current-entity slot is used for explicit factual retrieval questions ("Is anyone in the story tall?" "What is the tall entity's name?") despite these answers being linearly decodable from the prior-entity slot too. Consistent with this limitation, open-weight models perform near chance accuracy at processing syntax that forces two subject-verb-object bindings on a single token (e.g., "Alice prepares and Bob consumes food.") Interestingly, recent frontier models can parse this properly, suggesting they may have developed more sophisticated binding strategies. Overall, our results expose a gap between information that is available in activations and information the model actually uses, and suggest that the current/prior-entity slot structure is a natural substrate for behaviors that require holding two perspectives at once, such as sycophancy and deception.

Grounded Multimodal Named Entity Recognition (GMNER) aims to extract named entities and localize their visual regions within image-text pairs, serving as a pivotal capability for various downstream applications. In open-world social media platforms, GMNER remains challenging due to the prevalence of long-tailed, rapidly evolving, and unseen entities. To tackle this, existing approaches typically rely on either external knowledge exploration through heuristic retrieval or internal knowledge exploitation via iterative refinement in Multimodal Large Language Models (MLLMs). However, heuristic retrieval often introduces noisy or conflicting evidence that degrades precision on known entities, while solely internal exploitation is constrained by the knowledge boundaries of MLLMs and prone to hallucinations. To address this, we propose SAKE, an end-to-end agentic framework that harmonizes internal knowledge exploitation and external knowledge exploration via self-aware reasoning and adaptive search tool invocation. We implement this via a two-stage training paradigm. First, we propose Difficulty-aware Search Tag Generation, which quantifies the model's entity-level uncertainty through multiple forward samplings to produce explicit knowledge-gap signals. Based on these signals, we construct SAKE-SeCoT, a high-quality Chain-of-Thought dataset that equips the model with basic self-awareness and tool-use capabilities through supervised fine-tuning. Second, we employ agentic reinforcement learning with a hybrid reward function that penalizes unnecessary retrieval, enabling the model to evolve from rigid search imitation to genuine self-aware decision-making about when retrieval is truly necessary. Extensive experiments on two widely used social media benchmarks demonstrate SAKE's effectiveness.

Cross-lingual biomedical entity linking (BEL) maps mentions in any language to unique identifiers in a biomedical knowledge base, supporting clinical and biomedical NLP applications. We identify two issues affecting current systems. First, the UMLS (Bodenreider,2004) aliases used to train cross-lingual BEL retrievers are heavily skewed toward English, so retrievers generalize poorly to non-English mentions. Second, although context is often necessary for disambiguation, naively injecting context into retrievers trained only to align aliases severely degrades retrieval. We propose BioELX, a retrieve-rerank framework that addresses both issues. For retrieval, we continue training SapBERT_multi (Liu et al., 2021b) using Wikidata-derived cross-lingual alias supervision, forming shared concept neighborhoods across languages. For reranking, we adapt pretrained LLM rerankers to entity linking through mention-anchored prompting, which marks the target mention so that rerankers score candidates with respect to the intended mention rather than other salient tokens in the context. Experiments show that BioELX achieves new state-of-the-art results on four cross-lingual BEL benchmarks, improving Recall@1 by 4.8 to 18.2 percentage points over prior best results, without any task-specific BEL annotations. Our code and resources are available at https://github.com/AI4MedCode/BioELX.

Due to their capacity to acquire world knowledge from large corpora, pre-trained language models (PLMs) are extensively used in ultra-fine entity typing tasks where the space of labels is extremely large. In this work, we explore the limitations of the knowledge acquired by PLMs by proposing a novel heuristic to approximate the pre-training distribution of entities when the pre-training data is unknown. Then, we systematically demonstrate that entity-typing approaches that rely solely on the parametric knowledge of PLMs struggle significantly with entities at the long tail of the pre-training distribution, and that knowledge-infused approaches can account for some of these shortcomings. Our findings suggest that we need to go beyond PLMs to produce solutions that perform well for infrequent entities.