Self-Supervised Time Series Representation Learning

Self-supervised learning (SSL) assumes that solving pretext tasks on unlabeled data yields representations that transfer effectively across downstream applications via linear probing or fine-tuning. While this paradigm has driven major progress in vision and language, its benefits for time series remain under-investigated and often confounded by inconsistent experimental controls. To address this gap, we benchmark seven representative methods from five key SSL paradigms across anomaly detection, classification, and forecasting under parameter- and data-matched budgets. We find that transfer efficacy depends heavily on the downstream task. SSL yields substantial gains in anomaly detection and provides effective initializations for classification under fine-tuning, but offers limited to no advantage over non-pre-trained controls in forecasting. Furthermore, linear probing does not reliably predict fine-tuning performance, synthetic pre-training is often competitive with real-world corpora, and scaling encoder depth degrades forecasting accuracy. We synthesize these empirical results into practical evaluation and development guidelines for time-series SSL.

Time Series Foundation Models (TSFMs) have demonstrated notable success in general-purpose forecasting tasks; however, their adaptation to specialized classification problems remains constrained by the computational bottleneck of standard attention and the systematic omission of classical statistical knowledge. This technical report introduces KairosHope, a next-generation TSFM designed to reconcile massive generalization with analytical precision in classification tasks. The core of the proposal is the HOPE block, an architecture that replaces quadratic attention with a dual-memory system: Titans modules for dynamic short-term retention and a Continuum Memory System (CMS) for the abstraction of long-term historical context. To enrich the inductive bias, a Hybrid Decision Head is introduced, which fuses deep latent representations with deterministic statistical features extracted via tsfeatures package. KairosHope undergoes self-supervised pre-training on the massive Monash archive, combining Masked Time Series Modeling (MTSM) and contrastive learning (InfoNCE). Its subsequent adaptation to the UCR benchmark datasets is conducted through a rigorous Linear Probing and Full Fine-Tuning (LP-FT) protocol to prevent catastrophic forgetting. Empirical results demonstrate superior performance in domains characterized by strict temporal causality such as HAR or Sensor data. Consequently, KairosHope establishes a robust and efficient framework for the adaptation of foundation models to time series analysis.

Timeseries regression models often struggle to leverage large volumes of labeled multimodal data, particularly when the data are irregularly sampled or contain missing values. This is common in domains like healthcare and predictive maintenance, where data are collected from unreliable sources, and labeling requires expert knowledge or costly equipments. Transformer-based large language models have proven effective on structured data such as text through self-supervised learning (SSL) and generative pretraining (GPT) frameworks. However, such models lack the flexibility to efficiently process irregularly sampled multimodal timeseries data. In this paper, we introduce ITGPT, an attention-based architecture designed for handling multimodal, irregularly sampled timeseries by allowing training with both SSL losses and GPT-like objectives. We evaluate its performance on a healthcare task with the TIHM dataset, and a predictive maintenance task with the CompX dataset. Our results demonstrate that ITGPT achieves state-of-the-art performance without requiring resampling, feature fusion or explicit data imputation. Furthermore, when labels are scarce, ITGPT effectively leverages unlabeled data through SSL and GPT training, outperforming the purely supervised approach. This represents an important step towards efficiently using large and unstructured timeseries datasets for practical inference tasks.

Hyperspectral imaging (HSI) provides dense spectral information for the Earth's surface, enabling material-level understanding of land cover and ecosystem dynamics. Despite recent progress in hyperspectral self-supervised learning (SSL), existing datasets remain temporally shallow, limiting the development of long-horizon spatiotemporal modeling. To address this gap, we introduce ChronoEarth-492K, the first large-scale, temporally calibrated hyperspectral SSL dataset built upon NASA's EO-1 Hyperion mission, the world's longest continuous hyperspectral archive up to date (2001-2017). ChronoEarth-492K comprises 492,354 radiometrically harmonized patches across 185,398 global locations over 17 years, with 28,786 sites containing multi-temporal sequences ($\geq 3$ observations) that enable both short- and long-horizon temporal analysis. Building on this foundation, we establish the ChronoEarth-Benchmark, a unified evaluation suite spanning static, short-horizon, and long-horizon temporal tasks, constructed from six open-source geospatial products covering land cover, crop type, forest dynamics, and soil properties. We further introduce a standardized evaluation protocol and report extensive baseline results across state-of-the-art hyperspectral foundation models. Together, ChronoEarth and benchmark provide the first large-scale, temporally grounded platform for systematic spatiotemporal hyperspectral representation learning.

Channel state information (CSI) provides a widely available sensing modality for human and environment perception, but existing CSI sensing models usually rely on task-specific supervised training and require substantial labeled data for each task, device, user, or environment. This limits their scalability in practical deployments where unlabeled CSI is abundant but labeled data is costly to collect. In this paper, we present CSI-JEPA, a self-supervised predictive representation learning framework for label-efficient, multi-task Wi-Fi sensing. CSI-JEPA learns reusable temporal-spectral representations from unlabeled CSI samples by predicting latent features of masked channel regions from visible context. To better match the physical structure of CSI, CSI-JEPA tokenizes channel-response amplitude windows along the time and subcarrier dimensions. It then introduces a channel variation-aware masking strategy that samples predictive targets from regions with stronger local temporal and subcarrier-domain variations. After pretraining, the encoder is frozen and used as a backbone, with lightweight task-specific adapters added for downstream sensing tasks. We evaluate CSI-JEPA on seven real-world Wi-Fi sensing tasks spanning diverse objectives and deployment settings. The results show that CSI-JEPA improves downstream sensing performance over competitive baselines, achieving up to 10.64 percentage points mean accuracy gain over state-of-the-art supervised Transformer and matched-budget label savings of up to 98.0%.

Electrocardiogram (ECG) arrhythmia classification remains challenging due to signal variability, noise, limited labeled data, and the difficulty in achieving both accuracy and efficiency in models. While self-supervised learning reduces label dependency, most methods target either global contextual features or local morphological patterns, but rarely implement hierarchical multi-scale feature extraction. ECG signals require architectures that simultaneously capture fine-grained beat-level morphology and broader rhythm-level dependencies with computational efficiency. To overcome this limitation, this paper proposes the Electrocardiogram Neighborhood Attention Transformer (ECG-NAT), a novel self-supervised learning approach tailored for multi-lead ECG classification. Our two-stage approach begins with generative pretraining, using a masked autoencoder to reconstruct partially masked ECG signals across multiple diverse datasets, enabling the model to learn robust, domain-invariant representations from unlabeled data. This is followed by discriminative fine-tuning with a dual-loss function that combines supervised contrastive and cross-entropy losses, aligning representation learning with label prediction. The hierarchical attention mechanism efficiently captures multi-scale temporal features from localized beat morphology to broader rhythm patterns at low computational cost. ECG-NAT achieves robust performance on benchmark datasets, with 88.1% accuracy using only 1% labeled data, demonstrating strong efficacy in low-resource settings. The framework combines superior classification performance with computational efficiency, making it practical for real-time ECG diagnosis. The code will be made available upon acceptance at: https://github.com/Mahsagazeran/ECG-NAT.

Wearable devices enable continuous health monitoring from multimodal signals, but real-world deployment is hindered by limited labeled data and pervasive sensor incompleteness. While large-scale self-supervised pretraining reduces label dependence, most existing methods assume full modality availability. Current approaches for handling modality missingness often reconstruct entire absent signals, which can encourage hallucinating modality-specific details that are not inferable from the observed sensor signals and degrade robustness. We propose VCR, a self-supervised framework that learns to extract valid representations robust to modality missingness. VCR employs an orthogonal tokenizer to enforce strict orthogonal disentanglement by rectifying latent manifolds and applying a geometric projection, separating each modality into shared semantics and modality-specific residuals. This design preserves complete information integrity while serving as a structural foundation for robust learning under modality missingness. The resulting tokens are processed by a missing-aware mixture-of-experts backbone that adapts to varying patterns of modality availability. By constraining the objective to reconstruct only the shared components of missing modalities, VCR effectively mitigates hallucinations of non-inferable modality-specific details. Across multiple health monitoring tasks, VCR consistently improves performance and robustness under full, single-missing, and multiple-missing modality settings compared with strong supervised and self-supervised baselines.

Specialized foundation models are beginning to emerge in various medical subdomains, but pretraining methodologies and parametric scaling with the size of the pretraining dataset are rarely assessed systematically and in a like-for-like manner. This work focuses on foundation models for electrocardiography (ECG) data, one of the most widely captured physiological time series world-wide. We present a comprehensive assessment of pretraining methodologies, covering five different contrastive and non-contrastive self-supervised learning objectives for ECG foundation models, and investigate their scaling behavior with pretraining dataset sizes up to 11M input samples, exclusively from publicly available sources. Pretraining strategy has a meaningful and consistent impact on downstream performance, with contrastive predictive coding (slightly ahead of JEPA) yielding the most transferable representations across diverse clinical tasks. Scaling pretraining data continues to yield meaningful improvements up to 11M samples for most objectives. We also compare model architectures across all pretraining methodologies and find evidence for a clear superiority of structured state space models compared to transformers and CNN models. We hypothesize that the strong inductive biases of structured state space models, rather than pretraining scale alone, are the primary driver of effective ECG representation learning, with important implications for future foundation model development in this and potentially other physiological signal domains.

Self-supervised learning (SSL) is often deployed under changing information, such as shorter histories, missing features, or partially observed images. In these settings, predictions from coarse and refined views should be coherent: before refinement, the coarse-view prediction should match the average prediction expected after refinement. Martingales formalize this coherence principle, but standard SSL objectives do not enforce it. Unlike invariance objectives that pull views together, martingale consistency constrains only the expected refined prediction, allowing predictions to update as information is revealed while preventing systematic drift. We introduce a martingale-consistent SSL framework that closes this gap, with practical prediction- and latent-space variants and an unbiased two-sample Monte Carlo estimator based on stochastic refinement. We evaluate the approach on synthetic and real time-series, tabular, and image benchmarks under partial-observation regimes, in both semi-self-supervised and fully label-free settings. Across these experiments, our framework improves robustness and calibration under partial observation, yielding more stable representations as information is revealed.

Critical events in multivariate time series, from turbine failures to cardiac arrhythmias, demand accurate prediction, yet labeled data is scarce because such events are rare and costly to annotate. We introduce HEPA (Horizon-conditioned Event Predictive Architecture), built on two key principles. First, a causal Transformer encoder is pretrained via a Joint-Embedding Predictive Architecture (JEPA): a horizon-conditioned predictor learns to forecast future representations rather than future values, forcing the encoder to capture predictable temporal dynamics from unlabeled data alone. Second, we freeze the encoder and finetune only the predictor toward the target event, producing a monotonic survival cumulative distribution function (CDF) over horizons. With fixed architecture and optimiser hyperparameters across all benchmarks, HEPA handles water contamination, cyberattack detection, volatility regimes, and eight further event types across 11 domains, exceeding leading time-series architectures including PatchTST, iTransformer, MAE, and Chronos-2 on at least 10 of 14 benchmarks, with an order of magnitude fewer tuned parameters and, on lifecycle datasets, an order of magnitude less labeled data.

Wearable sensors enable the continuous acquisition of high-resolution physiological waveforms, such as photoplethysmography and accelerometry, under free-living conditions. However, inferring health-related phenotypes from these signals presents significant challenges due to high sampling frequencies, multimodal dependencies, and extreme sequence lengths (e.g., weeks of recordings), compounded by a scarcity of ground-truth labels. To address these challenges, existing self-supervised learning (SSL) methodologies typically follow two paradigms: (1) learning rich morphological representations from short waveform segments while collapsing longitudinal dynamics through simple aggregation, or (2) modeling behavioral patterns from coarse, hand-crafted features (e.g. heart rate, step counts) spanning longer horizons but foregoing subtle, predictive signatures in raw waveforms. To bridge this gap, we propose WavesFM, a foundation model utilizing a two-stage SSL framework for longitudinal physiological data. Specifically, we decompose the learning problem into two stages: first, a segment-level encoder is pretrained to extract local embeddings from short waveforms; subsequently, a temporal encoder is trained to model the sequence of these embeddings across a multi-day horizon. This hierarchical approach overcomes the computational complexity of high-resolution, long-sequence data, allowing the overall model to capture both local signal semantics and the complex circadian and inter-day variations governing physiological dynamics. Pretrained on over 6.8M hours (N=324k individuals) of recordings for the first stage and 5.3M hours (N=10k) for the second stage, WavesFM demonstrates superior performance across 58 diverse tasks spanning demographics, lifestyle, health conditions, and medications.

We propose a new class of waveform foundation models that departs from conventional sequence based representations by modeling physiological time series as realizations of latent event processes. Rather than treating signals as collections of local tokens or patches, our approach assumes that clinically meaningful structure arises from temporally extended, interacting events whose boundaries and dynamics are not directly observed. To capture this structure, we introduce a self supervised learning framework that enforces consistency across stochastic segmentations and time frequency projections of the same waveform, encouraging representations that are invariant to signal level perturbations while preserving event level organization. The resulting model combines a segmentation aware encoder with a latent interaction operator that captures dependencies among inferred events, and naturally extends to multimodal settings by aligning modalities through shared event representations. Across a range of physiological benchmarks, including arrhythmia classification, hemodynamic prediction, and waveform retrieval, the proposed method improves performance, robustness, and label efficiency relative to strong sequence based baselines. These results suggest that shifting from signal centric to event centric representations provides a more appropriate inductive bias for modeling physiological dynamics and offers a complementary path to scaling foundation models in healthcare.

Human Activity Recognition (HAR) from wearable sensors supports broad healthcare and behavior science applications. However, data heterogeneity and the scarcity of labeled data limit its real-world generalization. Recent advances in self-supervised learning (SSL) in vision and language domains have shown strong capability for learning generalizable representations from unlabeled data. Yet, few studies have systematically compared the generalization performance of SSL methods or explored how to adapt them for generalizable HAR. To address these gaps, we present BenchHAR, a unified framework for evaluating the generalization capability of SSL methods for sensor-based HAR on unseen target distributions. BenchHAR curates a large-scale dataset (~258K samples) and evaluates eight representative SSL methods across 12 encoder-classifier architectures. Our results reveal that existing SSL methods struggle to achieve satisfactory generalization performance. We find that: (1) For HAR models, the hybrid paradigm (combining reconstruction and contrastive pretraining) achieves the best overall performance. The CNN encoder exhibits the strongest ability to learn generalizable representations, while more expressive classifier architectures further improve generalization. (2) For data scale, increasing the amount of pretraining data from downstream activity classes consistently improves generalization, while adding more labeled data yields limited gains. Interestingly, incorporating unlabeled data from non-downstream activity classes does not improve generalization. (3) Sensor data collected from custom-grade devices generalizes better than that from research-grade devices, and data from limb transfers more effectively to trunk positions. BenchHAR provides a unified benchmark and actionable insights for generalizable sensor-based HAR systems. Our code is available at https://github.com/saiketa/HAR-Bench.

Surface electromyography provides a practical way to infer human movement intention from wearable muscle recordings, but models trained under a single acquisition setting often lose reliability when the user, session, electrode layout, or gesture protocol changes. This paper proposes AEMG, a self-supervised learning approach designed to extract reusable neuromuscular representations from diverse EMG sources. Eight public gesture datasets are first transformed into a shared signal format to reduce discrepancies in channel configuration, sensor topology, and recording protocol. Instead of relying on fixed-length sliding windows, AEMG identifies contraction events from energy variations and represents them as compact neuromuscular tokens, while ordered token groups describe the coordinated activity of multiple muscles during motion. A spatially and temporally conditioned Transformer is then used to encode these token sequences, preserving information about electrode position, activation timing, and sequential structure. For pre-training, the model constructs a discrete library of contraction prototypes through vector-quantized reconstruction and further learns contextual dependencies by recovering masked neuromuscular tokens from surrounding observations. Experiments under leave-one-subject-out and low-label adaptation settings show that the learned representation improves robustness to unseen users and reduces the amount of calibration data required for gesture recognition. These findings suggest that event-level token modeling offers a scalable route toward adaptable and data-efficient EMG-based motor-intent understanding.

Sleep foundation models have recently demonstrated strong performance on in-domain polysomnography tasks, including sleep staging, apnea detection, and disease risk prediction. In this work, we investigate whether sleep biosignals can serve as an effective pretraining distribution for learning representations that transfer beyond sleep to adjacent domains. Following sleep foundation models, we perform sleep-only multimodal contrastive pretraining (with a leave-one-out objective) and evaluate transfer to non-sleep EEG and ECG, two well-benchmarked biosignal modalities with heterogeneous datasets and clinically meaningful downstream tasks. Across eight downstream tasks spanning multiple EEG and ECG datasets, sleep pretraining consistently improves performance relative to training from scratch. Moreover, on several tasks, we achieve performance competitive with or surpassing prior specialized state-of-the-art and foundation models.

Self-supervised pretraining is promising for large-scale neuroimaging, yet the impact of region-aware masking and hybrid sequence modeling remains underexplored. In this work, we introduce Rhamba, a region-aware pretraining framework that integrates anatomically guided masking with hybrid Attention-Mamba architectures for resting state functional magnetic resonance imaging (fMRI) analysis. Models were pretrained on the ABIDE dataset using region-aligned patch embeddings and three masking strategies (Any, Majority, and Pure) with increasing spatial specificity. We evaluated four architectural variants: a Mamba only model, an Alternate architecture with interleaved Mamba and Attention blocks, and two hybrid encoder-decoder configurations (Attention-Mamba (AM) and Mamba-Attention (MA)). The pretrained models were fine-tuned on downstream classification tasks using the COBRE and ADHD-200 datasets for schizophrenia and attention-deficit/hyperactivity disorder discrimination. We employed Integrated Gradients, an explainable AI method, to identify the brain regions contributing to model predictions. Masking strategy strongly influenced reconstruction behavior, with reconstruction loss following a consistent ordering (Any > Majority > Pure). However, this trend did not directly translate into downstream performance, where differences were modest and dataset-dependent. The hybrid architecture with the MA configuration achieved the highest average AUROC across both datasets, and Rhamba outperformed state-of-the-art methods in comparative evaluation. Region-wise analysis showed that peak performance depends on the interaction between masking strategy and architecture rather than a single dominant configuration. Overall, Rhamba offers a flexible framework for balancing interpretability, scalability, and performance in large-scale fMRI representation learning.

Continuous Glucose Monitoring (CGM) can detect early metabolic subphenotypes (insulin resistance, IR; $β$-cell dysfunction), but population-scale deployment faces two coupled problems. First, the same physiological state appears through multiple views (CGM time series, venous OGTT, Glucodensity summaries), so single-view representations fail to transfer when deployment shifts the modality or setting. Second, baselines perform inconsistently across these shifts. Both problems point to one remedy: representations that abstract away from any single view to capture higher-level temporal and distributional structure. We propose CGM-JEPA, a self-supervised pretraining framework which predicts masked latent representations rather than raw values, yielding abstraction that transfers across modalities. X-CGM-JEPA adds a masked Glucodensity cross-view objective for complementary distributional information. We pretrain on $\sim$389k unlabeled CGM readings from 228 subjects and evaluate on two clinical cohorts ($N=27$ and $N=17$ public-release subsets) across three regimes (cohort generalization, venous-to-CGM transfer, home CGM) under 20-iteration $\times$ 2-fold cross-validation. X-CGM-JEPA ranks first or second on AUROC for both endpoints across all three regimes while no baseline does, exceeding the strongest baseline by up to $+6.5$ pp in cohort generalization and $+3.6$ pp in venous-to-CGM transfer (paired Wilcoxon, $p<0.001$). Under modality shift, it matches mean AUROC while redistributing toward weaker subgroups (ethnicity AUROC gap shrinks 25-54%); on sparse in-domain venous data, the distributional view lifts label-aware clustering (ARI $+39\%$, NMI $+40\%$). Code and weights: https://github.com/cruiseresearchgroup/CGM-JEPA

Learning meaningful representations from medical time series (MedTS) such as ECG or EEG signals is a critical challenge. These signals are often high-dimensional, variable-length and rife with noise. Existing self-supervised approaches, such as Masked Autoencoders (MAEs) are highly effective for pre-training general-purpose encoders. However, they do not explicitly learn compact and semantically interpretable latent representations, typically relying on heuristic aggregation strategies such as global average pooling or a designated [CLS] token. We propose a novel framework that compresses a variable-length MedTS into a fixed-size set of $k$ latent Fingerprint Tokens. Our architecture employs a cross-attention bottleneck to generate these tokens and is trained with a dual-objective function. The first objective is a reconstruction loss, which ensures the tokens are \textit{sufficient statistics} for the original data. The second, a diversity penalty based on the Total Coding Rate (TCR), explicitly minimizes the redundancy between tokens, encouraging them to become statistically \textit{disentangled} representations. We present the theoretical justification for our method, framing it as a novel \textbf{Disentangled Rate-Distortion} problem. This approach produces a low-dimensional, interpretable, and sample-efficient representation, where each token is encouraged to capture an independent factor of variation, paving the way for more robust digital biomarkers.

Modeling invasive neural spike data is fundamental to advancing high-performance brain-computer interfaces (BCIs). However, existing approaches face critical challenges, including limited-scale heterogeneous data, cross-domain distribution shift, and the intrinsic spatiotemporal complexity of invasive neural signals. In this work, we propose UniBCI, a unified pretrained model for invasive Brain-Computer Interfaces. The model integrates three key components: (1) a context-conditioned spatio-temporal tokenization (CST) scheme that embeds neural signals together with metadata into a shared representation space; (2) a hierarchical Interval-Area Attention (IAA) mechanism that captures patterns of spike dynamics in slots via linear attention and locality dependencies via sliding-window attention; and (3) a scalable self-supervised masked signals reconstruction objective for learning generalizable neural representations from large-scale unlabeled data. We construct a pretraining corpus spanning multiple species, subjects, brain regions, and behavioral experiment paradigms. These heterogeneous recordings are standardize via our proposed unified normalization and tokenization. Comprehensive experiments demonstrate that UniBCI achieves SOTA performance across diverse downstream tasks while improving generalization. Moreover, the model achieves a strong balance between accuracy and efficiency, with fewer trainable parameters and lower inference latency. These results suggest that UniBCI provides a practical step toward general-purpose neural foundation models, enabling robust, scalable, and transferable representation learning for invasive neural data. The code for this paper is available at: https://anonymous.4open.science/r/UniBCI-C805.

Understanding and representing complex climate variability is essential for both scientific analysis and predictive modeling. However, identifying meaningful climate regimes from raw variables is challenging, as they exhibit high noise and nonlinear dependencies. In this work, we explore the use of Masked Siamese Networks to discretize climate time series into semantically rich clusters. Focusing on daily minimum and maximum temperature, we show that the resulting representations: (i) yield clusters that reflect meaningful climate states under our modeling assumptions, offering a simplified representation for downstream use; (ii) enable sampling and analysis of specific climate scenarios; and (iii) exhibit statistical associations with El Niño events, underscoring their scientific relevance. Our findings highlight the potential of self-supervised discretization as a tool for climate data analysis and open avenues for incorporating richer climate indicators in future work.

Self-supervised learning in healthcare has largely relied on invariance-based objectives, which maximize similarity between different views of the same patient. While effective for static anatomy, this paradigm is fundamentally misaligned with clinical diagnosis, as it mathematically compels the model to suppress the transient pathological changes it is intended to detect. We propose a shift towards Action-Conditioned World Models that learn to simulate the dynamics of disease progression, or Event-Conditioned. Adapting the LeJEPA framework to physiological time-series, we define pathology not as a static label, but as a transition vector acting on a patient's latent state. By predicting the future electrophysiological state of the heart given a disease onset, our model explicitly disentangles stable anatomical features from dynamic pathological forces. Evaluated on the MIMIC-IV-ECG dataset, our approach outperforms fully supervised baselines on the critical triage task. Crucially, we demonstrate superior sample efficiency: in low-resource regimes, our world model outperforms supervised learning by over 0.05 AUROC. These results suggest that modeling biological dynamics provides a dense supervision signal that is far more robust than static classification. Source code is available at https://github.com/cljosegfer/lesaude-dynamics

Downhole drilling telemetry presents a fundamental labeling asymmetry: surface sensor data are generated continuously at 1Hz, while labeled downhole measurements are costly, intermittent, and scarce. Current machine learning approaches for downhole metric prediction universally adopt fully supervised training from scratch, which is poorly suited to this data regime. We present the first empirical evaluation of masked autoencoder (MAE) pretraining for downhole drilling metric prediction. Using two publicly available Utah FORGE geothermal wells comprising approximately 3.5 million timesteps of multivariate drilling telemetry, we conduct a systematic full-factorial design space search across 72 MAE configurations and compare them against supervised LSTM and GRU baselines on the task of predicting Total Mud Volume. Results show that the best MAE configuration reduces test mean absolute error by 19.8% relative to the supervised GRU baseline, while trailing the supervised LSTM baseline by 6.4%. Analysis of design dimensions reveals that latent space width is the dominant architectural choice (Pearson $r = -0.59$ with test MAE), while masking ratio has negligible effect, an unexpected finding attributed to high temporal redundancy in 1Hz drilling data. These results establish MAE pretraining as a viable paradigm for drilling analytics and identify the conditions under which it is most beneficial.

Damage identification is a core task in structural health monitoring. In practice, however, its reliability is often compromised by confounding non-damage effects, such as variations in excitation and environmental conditions, which can induce changes comparable to or larger than those caused by structural damage. To address this challenge, this study proposes a self-supervised label-free disentangled representation learning framework for robust vibration-based structural damage identification. The proposed framework employs an autoencoder with two latent representations to learn directly from raw vibration acceleration signals. A self-supervised invariance regularization, implemented via Variance-Invariance-Covariance Regularization (VICReg), is imposed on one latent representation using baseline data where structural damage is assumed constant but operational and environmental conditions vary. In addition, a frequency-domain constraint is introduced to enforce agreement between the power spectral density reconstructed from the latent representation and that computed from the corresponding input time series. Together, these mechanisms promote disentanglement, enabling the learned representation to be sensitive to damage-related characteristics while remaining invariant to nuisance variability. The framework is trained in a fully end-to-end and label-free manner, requiring no prior information on damage, excitation, or environmental conditions, making it well-suited for real-world applications. Its effectiveness is validated on two distinct real-world vibration datasets, including a bridge and a gearbox. The results demonstrate robustness to operational variability, strong generalization capability, and good performance in both damage detection and quantification.

Parkinson's disease (PD) is a chronic neurodegenerative disease. It shows multiple motor symptoms such as tremor, bradykinesia, postural instability, freezing of gait (FoG). PD is currently diagnosed clinically through physical exam by health-care professionals, which can be time consuming and highly subjective. Wearable IMU sensors has become a promising gateway for passive monitoring of PD patients. We propose a self-supervised cross-attention encoder that processes bilateral wrist-worn IMU signals from a public dataset called PADS, consisting of three groups, PD (Parkinson Disease), HC (Healthy Control) and DD (Differential Diagnosis) of a total of 469 subjects. We have achieved a mean accuracy of 93.12% for HC vs. PD classification and 87.04% for PD vs. DD classification. The results emphasize the clinical challenge of distinguishing Parkinson's from other neurodegenerative diseases. Self-supervised representation learning using contrastive infoNCE loss gained an accuracy of 93.56% for HC vs. PD and 92.50% for PD vs. DD using only 20% of labelled data. This demonstrates the effectiveness of our method in transfer learning for clinical use with minimal labels. The real-time applicability was tested by deploying the optimized model with a mean inference time of 48.32 ms per window on a Raspberry Pi CPU.

Although recent studies on time-series anomaly detection have increasingly adopted ever-larger neural network architectures such as transformers and foundation models, they incur high computational costs and memory usage, making them impractical for real-time and resource-constrained scenarios. Moreover, they often fail to demonstrate significant performance gains over simpler methods under rigorous evaluation protocols. In this study, we propose Patch-based representation learning for time-series Anomaly detection (PaAno), a lightweight yet effective method for fast and efficient time-series anomaly detection. PaAno extracts short temporal patches from time-series training data and uses a 1D convolutional neural network to embed each patch into a vector representation. The model is trained using a combination of triplet loss and pretext loss to ensure the embeddings capture informative temporal patterns from input patches. During inference, the anomaly score at each time step is computed by comparing the embeddings of its surrounding patches to those of normal patches extracted from the training time-series. Evaluated on the TSB-AD benchmark, PaAno achieved state-of-the-art performance, significantly outperforming existing methods, including those based on heavy architectures, on both univariate and multivariate time-series anomaly detection across various range-wise and point-wise performance measures.

Current deep learning models for electroencephalography (EEG) are often task-specific and depend on large labeled datasets, limiting their adaptability. Although EEG foundation models seek broader applicability, many still rely on predefined multi-channel inputs, electrode-layout assumptions, or model-specific channel handling. To address these limitations, we introduce the Single-Channel Large EEG Model (SingLEM), a self-supervised foundation model whose hybrid convolutional--Transformer encoder maps each channel independently to a reusable representation capturing local and long-range temporal structure. These representations can be used individually or combined through channel-wise feature concatenation. We assembled 71 public EEG datasets comprising approximately 9,200 subjects and 357,000 single-channel hours. For leakage-controlled evaluation, downstream results were obtained with a model pretrained on 68 datasets after excluding the three source datasets underlying the six tasks. A model pretrained on all 71 datasets is provided for general reuse. Across six motor imagery and cognitive tasks under strict leave-one-subject-out (LOSO) evaluation, the leakage-controlled model with concatenated representations and a support vector machine (SVM) classifier achieved the best overall performance among the compared pretrained and classical feature-based methods. Additional classifier and subject-adapted analyses supported the robustness of its representations. These findings support single-channel self-supervised learning as a montage-flexible foundation for reusable EEG feature extraction and electrode-level spatial analysis. The source code and pretrained models are available at https://github.com/ttlabtuat/SingLEM.

Recent advances in self-supervised learning for EEG representation have largely relied on masked reconstruction, where models are trained to recover randomly masked signal segments. While effective at modeling local dependencies, the training objective of masked reconstruction does not compel the model to capture global generative constraints essential for characterizing neural activity. To address this limitation, we propose EEGDM, a novel self-supervised framework that leverages latent diffusion models to generate EEG signals as an objective. Unlike masked reconstruction, diffusion-based generation progressively denoises signals from noise to realism, compelling the model to capture holistic temporal patterns and cross-channel relationships. Specifically, EEGDM incorporates an EEG encoder that distills raw signals and their channel augmentations into a compact representation, which serves as conditional information to guide the diffusion denoising process, thereby enabling the encoder and diffusion model to be jointly optimized through the generative objective. This design endows EEGDM with a compact latent space, which not only offers ample control over the generative process but also can be leveraged for downstream tasks. Experimental results show that EEGDM (1) reconstructs high-quality EEG signals, (2) learns robust representations, and (3) achieves competitive performance across diverse downstream tasks, thus exploring a new direction for self-supervised EEG representation learning.

Electroencephalography (EEG) is a critical tool for monitoring brain activity and diagnosing neurological disorders such as epilepsy. However, learning meaningful representations from raw EEG signals remains challenging due to limited annotations, substantial inter-subject variability, and complex temporal dynamics. Recent EEG foundation models (FMs) have demonstrated promising performance through transformer-based architectures and large-scale self-supervised pretraining, yet they often incur substantial computational costs and exhibit diminishing returns with increasing model and dataset scale, limiting their practicality in clinical settings. To address these challenges, we propose EEGDM, a diffusion-based EEG representation learning framework. Specifically, EEGDM introduces a Structured State-Space Model for Diffusion Pretraining (SSMDP) that effectively captures long-range temporal dependencies through generative diffusion training on unlabeled EEG data. The representations are subsequently leveraged for downstream tasks via our Latent Fusion Module (LFM), which integrates multi-layer latent features of SSMDP. We evaluate EEGDM on three EEG benchmarks spanning EEG event classification (TUEV), seizure detection (CHB-MIT), and seizure classification (IIIC). Compared with existing state-of-the-art methods, including EEG FMs, EEGDM achieves competitive performance across diverse tasks and datasets, exceeding existing methods in most cases while requiring substantially fewer samples for both pretraining and downstream adaptation. These results demonstrate that diffusion-based learning can unlock more discriminative EEG representations, with direct implications for epilepsy diagnosis and management. Our source code and pretrained checkpoints are publicly available at: https://github.com/jhpuah/EEGDM.

Industrial signal analysis is hindered by severe data heterogeneity, which we characterize as the M5 problem. Existing solutions rely on specialized models that lack robustness and scalability, while large-scale pre-training has rarely been investigated in this area. In this work, we derive a prioritized roadmap for the M5 problem and propose FISHER, a Foundation model for multi-modal Industrial Signal compreHEnsive Representation. To address the foremost multi-sampling-rate problem, FISHER utilizes a novel sub-band modeling approach that treats sampling rate increments as concatenated sub-band information, enabling the adaptive usage of full signal bandwidth without resampling. FISHER is pre-trained by teacher-student self-distillation over external audio and music data. We also establish the RMIS benchmark, comprising 19 datasets across four modalities. In the experiment, FISHER outperforms 24 state-of-the-art series encoders (up to 2B) with much smaller sizes (up to 16x), showcasing groundbreaking diagnostic accuracy and remarkable versatility. We further demonstrate that 1) seamless adaptation to variable sampling rates is the key to generalization 2) audio and music data provide better temporal variability, which is essential for pre-training. Both FISHER and RMIS are open-sourced.

While foundation models have revolutionized various domains, their application to time series classification remains rather under-explored, with existing literature predominantly focused on forecasting. To bridge this gap, we introduce \textbf{Mantis}, a transformer-based foundation model pre-trained exclusively on synthetic data via self-supervised contrastive learning. We demonstrate that effective tokenization is critical to unlocking the full potential of transformers, proposing a novel token generator unit. Furthermore, we introduce an enhanced test-time methodology that bridges the performance gap between Mantis and strong specialized approaches by leveraging intermediate-layer representations, self-ensembling, and cross-model embedding fusion. Extensive experiments demonstrate that Mantis establishes a new state-of-the-art, outperforming existing foundation models across four diverse dataset collections covering various application domains.