Gnn-Based Detectors

Logic resynthesis preserves circuit functionality while changing gate vocabulary, topology, and structural statistics, creating domain shift for circuit graph neural networks (GNNs) without changing task labels. To study this setting, we introduce ReDIL-GNN, a resynthesis domain-incremental learning framework that adapts a fixed prediction or representation head as new synthesis styles arrive and evaluates retention on all previously observed domains. Because not every shift should be adapted blindly, ReDIL-GNN further introduces the Resynthesis Adaptability Index (RAI), a pre-adaptation score that combines adaptation need, source-equivalence recoverability, structural coverage, and update compatibility. We evaluate supervised hardware-security tasks and representation-learning models using task-native metrics for classifiers and source-equivalence retrieval metrics for embedding models, comparing naive fine-tuning with LwF, Online EWC, MAS, ER, A-GEM, DER++, ER+LwF, and equivalence-guided replay. Across the studied pipelines, RAI separates unsupported shifts from promising updates, ranging from 0.001 for a structurally uncovered GNN-RE ABC-rewrite shift to 0.824 for the best original-only GNN-RE adaptation case. In practice, ReDIL-GNN turns resynthesis-aware circuit learning into a deployment control loop: RAI screens each new synthesis flow before update, guiding whether to reuse the current model, apply retention-aware adaptation, or defer adaptation until the shift is better supported.

The banking system now depends on a small set of shared artificial intelligence vendors for fraud screening, credit decisioning, anti-money-laundering triage, customer analytics, and internal decision support. This paper studies how a compromise inside one of those vendors can propagate along a chain of operational, informational, and financial linkages until it triggers losses that look, from the outside, like a classical banking crisis. We build a four-layer heterogeneous network that couples AI vendors, financial institutions, interbank exposures, and customer accounts, and we propose CFC-Prop, a stochastic epidemic-and-clearing model that runs on that network. On a synthetic dataset with 60 vendors, 220 banks, roughly 2,500 vendor-bank service edges, and 1,400 interbank exposures, CFC-Prop reproduces the heavy-tailed loss distributions and the sharp dependence on patch latency that are consistent with prior cyber-financial evidence. We also train an early-warning model, CFC-GNN, that uses vendor-side incident telemetry and graph structure to flag high-cascade-risk vendors before impact. Across four baselines the proposed model reaches AUROC 0.82 and AUPRC 0.60 while keeping calibration errors bounded. We release the full code, synthetic data, and reproducible scripts. The results argue that cyber concentration among AI vendors is a first-order financial-stability problem and give supervisors a concrete quantitative tool for reasoning about it.

Urban air quality can vary significantly along transit corridors, necessitating high-resolution monitoring. This work introduces a novel mobile-sensing dataset from Surat, Gujarat, India, comprising PM$*{2.5}$ concentrations, meteorological variables (temperature, humidity, wind speed, wind direction), and land-use features. To represent the spatiotemporal data as a graph, two node-definition strategies were used: (i) uniform segmentation (200--400~m intervals) and (ii) DBSCAN clustering to adaptively group dense observations. For each node, rolling mean and standard deviation of meteorological variables were computed. To model this high-dimensional data, we propose a SA-GNN for fine-grained, short-term PM$*{2.5}$ forecasting and hotspot identification. We compared SA-GNN with LSTM, RNN, GRU, and ANN models. These models performed well on low-resolution data but had difficulty capturing rapidly changing patterns in urban air quality. SA-GNN employs cluster-specific GRUs to capture localized temporal dependencies and a Graph Attention Network to learn spatial heterogeneity. This hybrid architecture effectively models rapid fluctuations and complex spatial interactions. On our dataset, SA-GNN achieved $R^2 = 0.95$, RMSE $= 6.8$, and MAE $= 4.2~\si{\micro\gram\per\meter\cubed}$, outperforming all baseline models. Combining spatial clustering with adaptive attention significantly improves forecasting, enabling real-time, fine-grained monitoring and supporting personalized exposure tracking and timely alerts for healthier cities.

GNN-based Knowledge Graph Question Answering (KGQA) pipelines process queries through four discrete stages: entity linking, subgraph retrieval, GNN reasoning, and answer generation. Standard robustness evaluations conflate stage-level failures into a single end-to-end metric, obscuring both the source of brittleness and the appropriate mitigation target. We ask which stage fails, and why, when the pipeline is subjected to adversarial perturbations on the input question. We introduce a stage-isolation protocol with two answer-preserving adversarial perturbations verified against the knowledge graph: Compositional Restructuring (CR) and Relation Synonym Swap (RS) target distinct stages while leaving entity seeds intact. Evaluated across ComplexWebQuestions and WebQSP, the results run counter to prevailing assumptions: the GNN reasoning stage retains near-baseline accuracy when the subgraph is intact, while subgraph construction accounts for over 99% of the end-to-end collapse under CR, occurring even when the gold answer is present in 74% of retrieved subgraphs. This exposes a fundamental distinction between answer presence and answer reachability that end-to-end metrics cannot detect, and places the mitigation target firmly at the subgraph construction stage rather than the reasoning model. Perturbed datasets and evaluation infrastructure are released at https://anonymous.4open.science/r/atkgrag-E85C .

Full-graph GNN training delivers high accuracy but scales poorly on multi-server clusters due to heavy, irregular inter-node embedding exchanges. We present SNI-GNN, a SmartNIC-assisted full-graph training system that reduces communication while preserving accuracy by predicting remote embeddings in-network. SNI-GNN deploys a lightweight linear-trend predictor on SmartNICs to refine cached historical embeddings, coupled with an importance-based boundary-node sampling policy and an asynchronous DPU--GPU data pipeline with intermediate-result reuse. We provide error and convergence bounds showing that predictor bias remains controlled under bounded second-order dynamics and yields standard non-convex convergence with inexact gradients. Implemented on NVIDIA BlueField-3, SNI-GNN integrates with state-of-the-art full-graph systems, cuts communication by 21--45%, achieves 1.3--3.6$\times$ end-to-end speedups over BNS-GCN and up to 1.29$\times$ over baseline SANCUS, with accuracy loss $\leq 0.01$, and scales efficiently to 16 GPUs on graphs with up to tens of millions of edges. These results indicate SmartNIC-based in-network prediction is a practical complement to partitioning and compression techniques for communication-efficient full-graph GNN training at scale.

Predicting how a subcortical structure's shape will evolve from a few prior scans could support prognosis and clinical-trial enrichment. Existing longitudinal mesh predictors either extrapolate shape trajectories via high-dimensional embeddings or regress vertex deformations directly. We instead predict the surface's intrinsic geometry in continuous time: a single per-structure graph network predicts the future per-vertex first fundamental form (metric tensor) for an arbitrary causal multiple-visit history and an arbitrary prediction horizon, conditioned on a Fourier encoding of the lead time. The predicted metric is decoded into a surface by a differentiable As-Rigid-As-Possible solver, and the model is trained end-to-end on the rigid-aligned vertex error. Training through the reconstruction keeps the decoded prediction a valid surface and consistently improves it. On 14 subcortical structures from the ADNI dataset, the proposed mesh evolution model (MT-GNN) predicts best among the evaluated methods at every horizon ($-2.29\%$ mean vertex error vs. the temporal mean, $p{=}6.1{\times}10^{-5}$, beating it on 14/14 structures), ahead of geodesic shape regression (DCM, $-0.19\%$) and a mesh transformer (TransforMesh, $-0.45\%$; $p{=}1.2{\times}10^{-4}$), with the lead widening as the horizon grows.

Graph inference over relational data can expose sensitive edge information, and this risk becomes more severe in dynamic graphs, where repeated model updates cause privacy loss to accumulate. We formulate Edge-level Differentially Private Dynamic Graph Inference (EDG) and propose PriDyG, a private inference framework that combines GNN-based structural learning with LLM-based semantic reasoning. PriDyG introduces incremental private multi-hop aggregation, which buffers newly arrived edges and processes each edge exactly once. By parallel composition, the total privacy cost equals that of a single static release, independent of the number or schedule of model updates. Compared with geometrically decaying budget allocation, incremental aggregation avoids exponentially increasing noise while preserving exact one-hop signals and at least half of two-hop information transfers. PriDyG further complements privatized GNN outputs with LLM predictions derived solely from node text, incurring no additional edge-level privacy cost. Experiments on four benchmarks for node classification and link prediction show that PriDyG consistently outperforms geometrically decaying baselines under the same privacy budget and matches the utility of naive per-update retraining while reducing cumulative privacy cost by up to three orders of magnitude.

Training Graph Neural Networks on large graphs is challenged by the memory cost of storing all node representations across layers. We show that several existing scalable approaches can be written as structured modifications of the GNN propagation matrix, providing a unified perspective that exposes their respective limitations. In particular, graph coarsening replaces it by a low-rank approximation that enables spectral guarantees but assigns uniform representations to clustered nodes, while Cluster-GCN restricts the propagation matrix to intra-cluster connections that allow efficient batching but sever long-range information. These are complementary failures of the \emph{same} decomposition of the graph into groups of nodes. To obtain the best of both worlds, we propose \textbf{CoRe-GNN}, which performs both propagations in parallel at each layer: a coarsened inter-cluster term capturing long-range structure, and a local intra-cluster term preserving per-node discriminability. We prove that CoRe-GNN inherits analogous approximation guarantees to those of graph coarsening, and introduce a natural cluster-based \emph{batching scheme} that scales to graphs with millions of nodes. On node classification benchmarks spanning homophilic, heterophilic, large-scale, and long-range graphs, CoRe-GNN outperforms both graph coarsening and Cluster-GCN baselines. Notably, CoRe-GNN reaches competitive accuracy on \emph{long-range} tasks, while remaining memory-efficient through batching.

While signed-directed graphs have been studied using linear Laplacians in the design of graph neural networks, relatively little research has focused on developing non-linear Laplacian operators for such networks. We introduce a non-linear Laplacian operator specific to signed and directed networks (NLSD). This non-linear operator extends the concepts of the signed Laplacian for signed graphs and the Laplacian for directed graphs. The NLSD calculates node-specific potentials based on features More precisely, if the potential discrepancy is not aligned with the edge direction, we ignore it (and vice versa) leveraging message-passing techniques only across edges where potential discrepancies align with the edge's direction. Utilizing this novel operator, we propose an efficient spectral GNN framework (NLSD-GNN). We conducted comprehensive evaluations focusing on node classification and link prediction, examining scenarios involving signed, directional, or both types of information. Our findings reveal that this spectral GNN framework not only integrates signed and directional data effectively but also achieves superior performance across diverse datasets.

The Traffic Assignment Problem is a fundamental but computationally expensive component of transportation planning. While Graph Neural Networks have emerged as fast, data-driven surrogates, their practical deployment is severely constrained by a spatial generalization gap. Standard models rely on transductive feature initializations that tie travel demand to fixed network topologies, preventing seamless transfer to new urban environments. To overcome this structural limitation, this research proposes a network-agnostic initialization layer, termed Geometrically Unconstrained Inductive Demand EmbeDding (GUIDED). By injecting travel demand as a scalar attribute on auxiliary virtual links rather than as specific node features, this modular framework standardizes the input space regardless of network scale. Extensive experimental evaluation across multiple urban topologies demonstrates that a Heterogeneous Graph Attention Network (HetGAT) model integrated with the proposed GUIDED layer maintains state-of-the-art predictive accuracy on single-network tasks, while demonstrating superior robustness to out-of-distribution demand patterns and maintaining a distinct performance advantage over the baseline even under severe data scarcity. Notably, the proposed feature initialization enables highly parameter-efficient domain adaptation for inter-network transfer learning without artificial input homogenization, establishing a robust foundation for truly inductive models. At the same time, the optimized scatter operations of the initialization layer yield an approximate 50% reduction in training time per epoch compared to the baseline approach. Furthermore, while demonstrated on vehicular traffic, this fundamental abstraction of spatial topology provides a versatile blueprint for generalized origin-destination spatial problems, such as freight logistics and multimodal network optimization.

Graph fraud detection plays a pivotal role in safeguarding the security and integrity of modern digital ecosystems. Graph Neural Networks (GNNs) are commonly adopted for graph fraud detection. However, the practical performance of existing GNN-based detectors is severely hindered by incomplete node attributes and extreme class imbalance within graphs. To mitigate these limitations, this paper proposes a novel framework for Graph Fraud Detection with Grouped attribute completion and Confidence-aware Contrastive learning, named GFD-GC. Specifically, it first imitates heterogeneous neighborhood structures to implement group-wise aggregation, which obtains informative complete node features by capturing fine-grained graph contextual patterns. Further, it introduces a confidence-aware supervised contrastive learning strategy to augment scarce labeled fraud nodes with high confidence pseudo-fraud nodes, which enhances the compactness of fraud representations and their separability from non-fraud nodes. Extensive experiments demonstrate the superiority of the proposed GFD-GC over state-of-the-art baselines on the graph fraud detection task, thereby providing an effective solution for real-world fraud scenarios.

Money laundering threatens financial stability and exposes institutions to penalties, motivating automated detection. Because laundering schemes often emerge through relational patterns, graph neural networks (GNNs) are increasingly used for anti-money laundering (AML). Yet AML GNNs are typically evaluated with aggregate metrics such as overall F1 score, which hide an operational issue: high-activity recipient accounts concentrate many incoming transactions, making suspicious signals harder to isolate and costlier to investigate. We introduce a recipient-degree stratified evaluation that reports standard AML metrics across recipient-context density. Across three datasets (HI-Small, HI-Medium, and AMLSim-32k-5%), it reveals consistent degradation in dense recipient contexts, which we trace to three GNN characteristics: two known limitations that AML amplifies, i.e., (1) multiset non-discriminability and (2) cardinality blindness, and (3) an attention-specific effect: in dense neighborhoods, normalized attention attenuates weak but pattern-relevant multi-hop signals. Guided by this diagnosis, we propose SALT-GNN, a lightweight statistics-aware architecture that fuses degree-aware statistical aggregation with attention at each message-passing layer, so distributional and cardinality information shapes the node states used by subsequent attention steps. Ablations support fusion placement as a key factor in dense-context performance. On HI-Small and HI-Medium, SALT-GNN uses up to 77% fewer parameters than task-specific graph-transformer baselines while improving dense-context F1 score by 3-6 points; on AMLSim-32k-5%, it improves highest-degree F1 score by 16-20 points. The gains hold for both Transformer- and GAT-style attention, indicating that the benefit comes from where statistical and attentional evidence is fused rather than from a specific attention operator.

Graph eXplainable AI (G-XAI) is increasingly important for making Graph Neural Networks interpretable and accountable. While a growing number of explainers are available, choosing the right method and assessing the trustworthiness of its outputs remains unclear. Consistent evaluation practices and actionable guidance are still missing, hindering practical adoption. In this paper, we introduce a unified, quantitative benchmarking framework for G-XAI that requires no ground-truth assumptions. We formalize tabular explainability metrics for graph data, evaluating topological structure and node features as independent components. Our large-scale benchmarking study identifies explainers that consistently lie on the Pareto front across metric pairs and tasks, establishing robustly non-dominated solutions - while confirming that no single explainer achieves universal superiority. We distill our findings into actionable G-XAI usability guidelines to support Machine Learning practitioners in evaluating and deploying trustworthy GNN-based pipelines.

Radio frequency (RF) maps provide a compact representation of multipath propagation characteristics and are fundamental to channel modeling, coverage analysis, and environment-aware wireless optimization. This paper proposes a unified RF map construction framework based on a physics-informed neural network (PINN) and a graph neural network (GNN), supporting both cross-scene generation and in-scene completion with 2D and 2.5D environmental representations. The PINN embeds electromagnetic propagation constraints to establish a physically consistent mapping from receiver locations to multipath parameters, including path gain, time of arrival, and angles, while the GNN enforces spatial consistency by modeling correlations among neighboring receivers. To comprehensively evaluate multipath reconstruction quality, we propose a peak-weighted dynamic time warping metric that jointly accounts for amplitude errors and peak delay misalignment in channel impulse responses. Extensive experiments demonstrate that the proposed method consistently outperforms image-based, diffusion-based, and interpolation baselines across both map-level and multipath-level metrics, achieving robust generalization and high-fidelity RF map construction under sparse observations.

Text-Attributed Graphs (TAGs) combine textual semantics with graph structure and are central to many graph learning tasks. However, existing fusion methods often treat text and structure as separate inputs in a shallow, one-way pipeline, which limits deep interaction between modalities and weakens performance under sparse connectivity or cross-graph generalisation. To address this issue, we propose PromptGNN-sim, a bi-directional structure-semantic fusion framework for collaborative GNN-LLM learning. PromptGNN-sim uses a Graph Attention Network (GAT) for semantically aware neighborhood selection by combining structural attention with textual similarity. The selected structural context is then used to generate structure-aware prompts for an LLM, including the target node summary, label categories, and representative keywords from similar neighbors. During training, bi-directional cross-modal contrastive learning and cross-attention are introduced to jointly optimize the GNN and LLM components. Experiments on six public datasets, including Cora, Pubmed, and WikiCS, evaluate accuracy, generalisation, and robustness under cross-task transfer, cross-dataset generalisation, and sparse perturbations. Results show that PromptGNN-sim outperforms classical GNNs, LLMs, and recent GNN-LLM fusion methods, demonstrating the effectiveness of interactive structure-semantic collaboration for text-attributed graph learning.

Graph-based fraud detection is essential for safeguarding large-scale transaction systems, where undetected anomalies may lead to substantial financial losses and security risks. Real-world fraud graphs pose two coupled challenges: sparse and imbalanced supervision, where verified fraudulent labels are scarce and heavily skewed toward benign accounts, and representation dilution, where spatial message passing may oversmooth camouflaged anomalies while spectral filters may suppress fraud-relevant mid- and high-frequency irregularities. To address these challenges, we propose ADC-GNN, short for Attention-guided Diffusion-Contrastive Graph Neural Network, a unified framework that combines diffusion-guided feature augmentation, contrastive representation learning, and multi-hop spectral attention for few-shot graph fraud detection. The diffusion component is formulated as a feature-space denoising augmentation mechanism rather than a full topology-generative graph diffusion model: it constructs noise-perturbed node-feature views under a cosine schedule and uses contrastive learning to stabilize node representations across perturbations. The spectral attention module further adaptively emphasizes fraud-relevant hop-level and relation-level cues. We evaluate ADC-GNN primarily on three public benchmarks and additionally report a proprietary real-world telecom transaction dataset with approximately 60,000 records as a private case study. Under the 1% training setting, ADC-GNN achieves consistent improvements over original graph fraud baselines and four protocol-consistent recent graph anomaly/fraud baselines on the public benchmarks. Additional analyses on split stability, training ratios, oversampling alternatives, module-level ablations, diffusion schedules, and runtime and memory-consumption comparisons further characterize the effective operating regime of ADC-GNN.

Spectral graph neural networks (GNNs) interpret message passing as frequency-selective filtering. While low-order spectral filters are efficient, their limited selectivity often leads to weak attenuation outside the passband, whereas high-order alternatives introduce optimization challenges. We propose DCQ-GNN, a spectral GNN based on a compact bank of adaptive convex--concave quadratic filters. By restricting the filter order to two while explicitly exploiting complementary curvature, DCQ-GNN improves spectral selectivity as quantified by Dirichlet energy and entropy measures without resorting to high-order polynomial expansions. The model fuses filter outputs through a node-adaptive gating mechanism to enable node-wise structure-aware spectral selection. We provide a formal spectral analysis grounded in Dirichlet energy attenuation, von Neumann entropy, and curvature polarity, and derive explicit characterizations of filter behavior across varying levels of homophily and structural perturbations. Extensive benchmarks on 10 datasets show that DCQ-GNN ties for the top average rank (3.0) on heterophilic graphs and obtains the second-best rank (4.2) on homophilic graphs, remaining competitive with representative high-order polynomial spectral filters. Furthermore, under strong structural perturbations, DCQ-GNN exhibits substantially smaller performance degradation compared to both first-order and high-order baselines. These results demonstrate that curvature-aware quadratic banks provide a robust and efficient alternative to high-order spectral models while preserving optimization stability and computational efficiency.

This paper presents SuperCond-GNN, a graph neural network-based surrogate model for predicting the voltage distribution in high-temperature superconducting (HTS) magnets. HTS magnets are modeled as lumped-element equivalent circuits and mapped onto graph representations, enabling message passing GNNs to learn the electrical response as a function of circuit topology, material properties, and operating current. As a proof of concept, tape stacks of up to 10 tapes are considered across a range of circuit topologies and operating conditions. The surrogate is trained on data generated from circuit simulations and achieves a mean MAPE of 4.3 % within the prescribed design space. The predicted nodal voltages enable fast and scalable inference of current redistribution and local operating conditions across a wide range of circuit configurations. The effect of incorporating physics-informed regularization via Kirchhoff's current law is also evaluated, and generalizability to unseen topologies is assessed through zero-shot inference and few-shot fine-tuning. While demonstrated on tape stack circuits, the graph-based framework is topology-agnostic and naturally extensible to more complex HTS cable and magnet configurations, offering a scalable alternative to conventional circuit solvers for downstream applications such as design space exploration, current sharing analysis, and real-time magnet monitoring.

In recent years, credit card fraud detection has faced significant challenges due to highly imbalanced data, evolving fraud patterns, and complex relational structures among transaction entities. To address these issues, this research proposes a novel framework called Timeaware Multi Relational Guided Graph Neural Network (TMR GGNN). Particularly, the proposed TMR GGNN extends the encoder decoder Graph Neural Network GNN architecture by modeling heterogeneous interactions across customers, merchants, devices, and IPs over temporal windows. Subsequently, the proposed TMR GGNN approach constructs a dynamic, multi relational graph and incorporates a time aware relational attention mechanism within the encoder to adaptively weigh the transaction relevance based on temporal proximity and semantic context. Consequently, the decoder employs a contrastive learning module to distinguish between real and synthesized transaction patterns, while improving the models generalization of rare fraud cases. Additionally, to effectively manage severe class imbalances and emphasize discriminative learning, a composite loss function combining Information Noise Contrastive Estimation (InfoNCE) based contrastive loss with Focal Loss is introduced. This integration assists in improving fraud identification while mitigating false negatives.

Text-attributed graphs (TAGs) underlie real-world applications such as citation networks, social media, and e-commerce. Few-shot graph learning on TAGs is hard: with only a handful of labels per class and the rest of the graph unannotated, neither GNNs nor LLMs can learn well on their own. GNNs read topology and fail on cold nodes; LLMs read text and fail on text-ambiguous nodes. Existing LLM-GNN methods all follow the same recipe: designate one model as the golden teacher and use its outputs (e.g., features or pseudo-labels) to supervise the other. We argue this golden-teacher assumption breaks under sparse supervision: neither model is golden, and treating either as such transfers its blind spots into the student. We therefore ask: can we avoid designating either model as the golden teacher, and still perform effective graph learning? We answer with LLM-GNN Co-Teaching, a bidirectional co-teaching framework in which neither model is fixed as teacher. The GNN and LLM exchange their most confident pseudo-labels under an architecture-specific small-loss criterion, and both update every round. Supervision is then mined from the trajectory: whenever a node moves from cross-model contradiction at round t to cross-model agreement at round t+1, the LLM's two answers on the same input form a preference pair (old contradicting self < new peer-endorsed self) for DPO training. We call this Round-based Pseudo-Label Preference Optimization (RPL-PO). On six benchmarks, LLM-GNN Co-Teaching consistently outperforms GNN-as-Judge and all prior methods, with absolute 3-shot gains of 7.86% on Cora and 7.73% on ogbn-arxiv; improvements carry over to 5-shot and to zero-shot cross-dataset transfer. Error-structure analysis further shows that abandoning the golden-teacher assumption substantially improves the LLM's graph learning capability on challenging samples.

Knowledge Graph Completion (KGC) aims at predicting missing triplets from incomplete knowledge graphs, which is crucial for downstream applications. Recently, Graph Neural Network (GNN)-based methods have achieved remarkable success by performing message passing over query-centered local subgraphs. However, in practice, a query is jointly defined by both the entity and the relation, with both carrying information indispensable for reasoning, yet these methods rely solely on the query relation as the guiding signal, while the information inherent in the query entity is not leveraged to guide inference - the entity serves merely as a structural anchor for subgraph extraction. To this end, we incorporate query entity information into the reasoning process from two perspectives: the first is structural context, i.e., the neighboring structure and relation patterns around the entity, which is encoded by a dedicated context encoder and used to modulate messages; the second is semantic type of the entity, inferred by a large language model, which is incorporated into attention computation and final scoring to provide type-level prior constraints. Together, these two sources of information enable the reasoning process to be guided by both the query relation and the query entity. Experimental results on standard benchmarks demonstrate the effectiveness of the proposed Q-GNN.

Multi-object tracking (MOT) from UAV imagery presents unique challenges: altitude varies across sequences, objects are small and densely packed, and frequent occlusion causes identity switches. Existing graph-based trackers assume fixed spatial context and treat all objects uniformly, ignoring the heterogeneous lifecycle states of detections, active tracklets, and lost targets. We propose HDST-GNN, a Heterogeneous Dynamic Spatiotemporal Graph Neural Network with three novel contributions. First, Altitude-Adaptive Edge Construction estimates a camera-altitude proxy from mean object area and adjusts the graph connectivity radius accordingly. Second, Heterogeneous Node Representation models detections (Type-D), confirmed tracklets (Type-T), and lost tracklets (Type-L) as distinct node types with dedicated projections and typed edge relations. Third, Occlusion-Gated Temporal Aggregation gates each node's attention contribution by its occlusion confidence, preventing occluded nodes from corrupting neighbour embeddings. HDST-GNN is trained end-to-end with a differentiable Sinkhorn head using joint cross-entropy and triplet loss. On VisDrone2019-MOT with oracle detections, HDST-GNN achieves 94.51% MOTA and 97.24% IDF1, outperforming SORT by +5.0 MOTA points and reducing identity switches by 81%. With real YOLOv8n detections, HDST-GNN reduces identity switches by 49% vs. SORT. Ablation studies confirm the independent contribution of each component.

Through digital humanities research and scale-up historical data analysis, a significant amount of traditional historical text is converted into structured knowledge graphs. This paper provides a high-level architecture that combines bidirectional encoder representations of transformers (BERT) and graph neural networks (GNN) to extract the entities and relationships from various types of historical texts. The texts of traditional history resolve linguistic ambiguities, references limited by context, and a lack of established grammatical norms in a systematic way. This study develops a new image retrieval system based on FastRQNet and pre-trained vision-language model Vilt-qaformer+RoBInet in accordance with the aforementioned recommendations. The experiments make full use of a comprehensive collection of municipal records, parliamentary documents, and historical correspondence. When compared to conventional rule-based techniques and other popular deep-learning baselines, the joint BERT-GNN system obtains greater Precision, Recall, and F1-score (Table 2). Complex nested structures and implicit reference issues can be handled by this structure with sufficient accuracy and thoroughness when creating knowledge graphs. The aforementioned experiments show that combining relational graph learning algorithms with context-sensitive semantic representation techniques can automatically extract historical data to add accumulated wisdom to the knowledge repository.

Graph fraud detection has long depended on Graph Neural Networks (GNNs) to propagate and aggregate information across relational data. A critical obstacle in practice, however, is that fraudsters frequently disguise themselves by forging numerous connections with benign users, causing fraud signals to be progressively diluted during neighborhood aggregation and undermining detection reliability. While recent efforts have used Large Language Models (LLMs) to provide rich semantic cues for fraud detection, the underlying intent behind suspicious connections remains insufficiently explored. Compounding this issue, the scarcity of annotated fraud samples makes it difficult to train detectors that remain robust under heavy camouflage. To address these gaps, we propose L2IR, an LLM-driven Latent Intent Revealing framework for graph fraud detection. By uncovering latent intent from both user behaviors and suspicious connections, L2IR extracts intent-aware representations from raw behavioral traces and reasons about the true purpose behind individual connections, effectively distinguishing supportive links from misleading ones. It further incorporates adaptive self-training to enhance robustness under limited supervision. Evaluations on two real-world datasets characterized by pervasive camouflage demonstrate that L2IR surpasses strong baselines and can function as a plug-in enhancement for a range of GNN-based detectors, improving AUPRC by up to 8.27%.

Dynamic graph neural networks (DGNNs) that operate on snapshot sequences typically fall into one of two categories. \emph{Temporal-first} approaches build per-node temporal embeddings and only afterward perform spatial aggregation, whereas \emph{Spatial-first} approaches invert this order, feeding the output of a graph convolution into a downstream temporal module. In either case, the rigid sequencing forces the second stage to consume an already-compressed summary produced by the first, ruling out joint reasoning over topology and evolution; effectively, the message-passing operator never gets to weight a neighbor's contribution by that neighbor's \emph{past} trajectory. This paper introduces \textbf{SiST-GNN} (\textbf{Si}multaneous \textbf{S}patial-\textbf{T}emporal \textbf{GNN}), which fuses the two signals inside a single message-passing operation rather than chaining them. At each snapshot, we maintain a recurrent hidden state per node that summarises its history, pairs it with the node's current feature vector, and treats the pair as two nodes joined by a cross-time edge; running a standard graph convolution on this temporally augmented graph yields the updated representation. We compare against fourteen link-prediction baselines under both the fixed-split and live-update evaluation regimes, and eleven baselines on node classification. Across the public benchmarks, SiST-GNN improves on the strongest prior method in link prediction by 1-18% in the fixed-split setting, and is the leading learned method on five of six datasets in the live-update setting, improving on the strongest prior method by 1-158% there. We additionally derive three dynamic node-classification tasks by discretizing the underlying continuous-time event streams; here SiST-GNN beats the leading discrete-time (DTDG) baseline by 7-23% and matches continuous-time (CTDG) methods that consume the raw events directly.

EEG-based emotion recognition holds significant promise for objective diagnosis of mood disorders. Graph neural networks (GNNs) have emerged as the dominant paradigm for modeling inter-channel dependencies in EEG, yet existing approaches rely on symmetric adjacency matrices derived from spatial proximity or functional correlations that fundamentally capture statistical associations rather than directed causal influences, which conflicts with the inherently asymmetric, causally-driven nature of neural information flow. To bridge this gap, we propose GL-LFGNN, a Global-Local Dual-branch Causal Graph Neural Network grounded in Liang-Kleeman information flow theory. Unlike Granger causality that merely assesses temporal precedence, our approach rigorously quantifies causal strength from a dynamical systems perspective, yielding neurophysiologically interpretable directed graphs. A dual-branch architecture further integrates whole-brain connectivity with region-specific processing aligned to established functional neuroanatomy. On the MEEG dataset, GL-LFGNN achieves 86.17% (Arousal) and 86.71% (Valence) accuracy with only 37K parameters -- approximately 10% of the current state-of-the-art -- demonstrating that principled causal modeling can simultaneously enhance interpretability, generalization, and computational efficiency. Code will be released.

Explaining graph neural networks (GNNs) has become more and more important recently. Higher-order interpretation schemes, such as GNN-LRP (layer-wise relevance propagation for GNN), emerged as powerful tools for unraveling how different features interact thereby contributing to explaining GNNs. GNN-LRP gives a relevance attribution of walks between nodes at each layer, and the subgraph attribution is expressed as a sum over exponentially many such walks. In this work, we demonstrate that such exponential complexity can be avoided. In particular, we propose novel algorithms that enable to attribute subgraphs with GNN-LRP in linear-time (w.r.t. the network depth). Our algorithms are derived via message passing techniques that make use of the distributive property, thereby directly computing quantities for higher-order explanations. We further adapt our efficient algorithms to compute a generalization of subgraph attributions that also takes into account the neighboring graph features. Experimental results show the significant acceleration of the proposed algorithms and demonstrate the high usefulness and scalability of our novel generalized subgraph attribution method.

The reliability of Healthcare Information Systems (HIS) is frequently compromised by human-induced data entry errors, which existing statistical anomaly detection methods fail to distinguish from legitimate clinical extremes. This paper proposes Logic-GNN, a novel neuro-symbolic framework that treats clinical records as a structured private language'' governed by latent logical games. By integrating Temporal Graph Neural Networks (TGNN) with Graph Kolmogorov Complexity, we induce a symbolic grammar that represents the underlying logic of medical interactions. We define anomalies as grammatical violations'' that cause a significant expansion in the Minimum Description Length (MDL) of the clinical graph. Evaluated on the Sina System dataset (2M+ records), Logic-GNN achieves an F1-score of 0.94, outperforming state-of-the-art baselines by 12% in distinguishing between life-threatening medical outliers and data corruption. Our approach introduces a self-healing mechanism that suggests logical corrections to maintain data integrity in real-time HIS environments.

Leveraging Graph Neural Networks (GNNs) as graph encoders and aligning the resulting representations with Large Language Models (LLMs) through alignment instruction tuning has become a mainstream paradigm for constructing Graph Language Models (GLMs), combining the generalization ability of LLMs with the structural modeling capacity of GNNs. However, existing GLMs that adopt GNNs as graph encoders largely overlook the problem of aligning GNN-encoded representations across domains and tasks with the LLM token space to obtain unified graph tokens, thereby limiting their ability to generalize across diverse graph data. To bridge this gap, we aim to incorporate a multi-domain, multi-task GNN encoder into GLMs and align its representations with LLMs to enable multi-domain, multi-task graph alignment instruction tuning. This alignment problem remains underexplored and poses two key challenges: 1) learning GNN-encoded representations that are simultaneously generalizable across domains and tasks and well aligned with textual semantics is difficult, due to substantial variations in graph structures, feature distributions, and supervision signals, together with the lack of textual-semantic alignment guidance in task-specific GNN training; 2) diverse graph data and task-specific instructions can exhibit different degrees of compatibility with the LLM token space during instruction tuning, leading to varying alignment difficulty and rendering a fixed alignment strategy suboptimal. To tackle these challenges, we propose UniGraphLM, a Unified Graph Language Model that incorporates a multi-domain, multi-task GNN encoder to learn generalizable graph representations aligned with textual semantics, and then adaptively aligns these representations with the LLM.

Collaborative filtering (CF) models based on graph neural networks (GNNs) achieve strong performance in recommender systems by propagating user-item signals over interaction graphs. However, they are highly susceptible to popularity bias, since skewed interaction distributions and repeated message passing across high-order neighborhoods amplify the influence of popular items while suppressing long-tail ones. Existing debiasing approaches, including re-weighting objectives, regularization, causal methods, and post-processing, are less effective in GNN-based settings because they do not directly counteract bias propagated through the aggregation process, and recent in-aggregation weighting methods often rely on static heuristics or unstable embedding estimates. We propose Debiasing Popularity Amplification in Aggregation (DPAA), a popularity debiasing framework for GNN-based CF that integrates adaptive, embedding-aware interaction weighting and layer-wise weighting directly into message passing. DPAA assigns interaction-level weights from a representation-aware popularity signal, stabilized by a smooth transition from pre-trained to evolving model embeddings during training. It further introduces a layer-wise weighting that amplifies higher-order neighborhoods, surfacing long-range interactions with diverse and underexposed items. Experiments on real-world and semi-synthetic datasets show that DPAA outperforms state-of-the-art popularity-bias correction methods for GNN-based CF.

EDA problems are graph-structured, but not all graph-structured problems call for the same GNN computation. We argue that successful GNN-for-EDA methods are those whose propagation, aggregation, and supervision align with the native algebra of the target task. Concretely: static timing analysis is a max-plus/min-plus recurrence on a topologically ordered DAG, structurally aligned with asynchronous DAG-GNNs; placement is governed by hypergraph wirelength and density penalties and is exploited by differentiable placers rather than by message-passing GNNs alone; routing congestion is a sparse demand-supply field over a layout grid; switching-activity propagation is a probabilistic recurrence on a directed netlist; IR drop is a linear system on the power-delivery network; and analog symmetry extraction is a discrete constraint-prediction problem on schematic graphs. Through these task-by-task alignments we (i) review the GNN architectural toolkit relevant to circuits, (ii) formalize how circuit graphs differ from generic graphs (directed, heterogeneous, multi-scale, with sequential and clock structure), (iii) characterize where current methods succeed and where the algebra-architecture mismatch limits them, and (iv) identify failure modes--stage leakage, proxy-to-signoff gap, calibration, and design-distribution shift--that we believe are likely to dominate the next phase of work. We position the paper as a GNN-for-EDA, task-aligned analysis rather than a comprehensive AI-for-chip-design survey. Continuous SE(3)-equivariant geometric GNNs are usually mismatched to Manhattan digital layout, and LLM-for-RTL, HLS, and RL/diffusion-based topology generation are outside our scope.

GNNs have become a standard tool for learning on relational data, yet they remain highly vulnerable to backdoor attacks. Prior defenses often depend on inspecting specific subgraph patterns or node features, and thus can be circumvented by adaptive attackers. We propose PRAETORIAN, a new defense that targets intrinsic requirements of effective GNN backdoors rather than surface-level cues. Our key observation is that flipping a victim node's prediction requires substantial influence on the victim: attackers tend to either inject many trigger nodes or rely on a small set of highly influential ones. Building on this observation, PRAETORIAN (i) analyzes internal correlations within potential trigger subgraphs to detect abnormally large injected structures, and (ii) quantifies external node influence to identify triggers with disproportionate impact. Across our evaluations, PRAETORIAN reduces the average attack success rate (ASR) to 0.55% with only a 0.62% drop in clean accuracy (CA), whereas state-of-the-art defenses still yield an average ASR of >20% and a CA drop of >3% under the same conditions. Moreover, PRAETORIAN remains effective against a range of adaptive attacks, forcing adversaries to either inject many trigger nodes to achieve high ASR (>80%), which incurs a >10% CA drop, or preserve CA at the cost of limiting ASR to 18.1%. Overall, PRAETORIAN constrains attackers to an unfavorable trade-off between efficacy and detectability.

Aging clocks aim to estimate biological age, a measure of physiological state distinct from chronological age, from observable biomarkers, and are widely used for health assessment and disease analysis. DNA methylation is a particularly informative biomarker due to its stability and strong association with aging, and recent learning-based approaches have improved predictive performance. However, most existing methods treat CpG sites as independent features, overlooking the complex and heterogeneous biological relationships among them. We propose RelAge-GNN, a multi-relational graph neural network framework for DNA methylation-based age prediction. Our method constructs three complementary graphs capturing co-methylation patterns, genomic co-localization, and gene-level associations among CpG sites. Each graph is modeled by an independent GNN branch, and a learnable gating mechanism adaptively fuses the resulting representations. Experiments on large-scale datasets show that RelAge-GNN achieves competitive accuracy and stronger correlation with chronological age compared to state-of-the-art methods. Moreover, the model exhibits improved sensitivity in detecting age acceleration across diverse disease cohorts, highlighting its potential utility for disease characterization. Finally, through post hoc interpretability analyses, we quantify the contributions of different relational structures and CpG sites, providing biologically meaningful insights and suggesting potential directions for aging-related research. Our code is available at: https://anonymous.4open.science/r/RelAge-GNN-F1E3/.

Gestational Diabetes Mellitus (GDM) is a high-prevalence pregnancy complication that requires accurate early risk stratification to reduce maternal and fetal morbidity. However, real-world clinical deployment of machine learning is hindered by two coupled constraints: (i) label scarcity, where a large fraction of electronic health records (EHR) lack confirmed diagnostic labels, and (ii) data privacy, which prevents sharing patient-level data across hospitals. This paper proposes FedTGNN-SS, a privacy-preserving federated semi-supervised framework for clinical tabular EHR. Each hospital builds a local k-nearest-neighbor patient similarity graph and trains a topology-adaptive GNN encoder. To robustly exploit unlabeled records, FedTGNN-SS combines (1) prototype-guided pseudo-labeling with neighborhood agreement, (2) adaptive graph refinement that periodically updates the k-NN graph using learned embeddings, (3) clinical-aware consistency augmentation applied only to continuous variables, and (4) privacy-safe prototype sharing that exchanges only class-level centroids. Across three diabetes-related datasets (GDM: N = 3,525; Pima: N = 768; Early Stage: N = 520) under 10%-80% missing labels per silo, FedTGNN-SS achieves 56 significant wins ($p < 0.05$) against 11 federated baselines and attains strong AUROC under extreme scarcity (Pima: 0.8037 at 80% missing, Early Stage: 0.9634 at 80% missing).

This paper investigates coordinated downlink transmission in a multi-base station (multi-BS) multi-reconfigurable intelligent surface (multi-RIS)-assisted pinching-antenna (PA) system, where each user equipment (UE) is associated with a single BS and each BS is equipped with movable PAs deployed on parallel waveguides. We formulate sum rate (SR) and energy efficiency (EE) maximization problems by jointly optimizing PA placement, RIS phase shifts, transmit beamforming, and BS-UE association under constraints of inter-PA spacing, power budget, and unit-modulus phase shift. To address the resulting highly coupled mixed-variable problem, we propose a three-stage graph neural network (GNN) that integrates heterogeneous and homogeneous graph representations and is trained end-to-end in an unsupervised manner. Extensive numerical results demonstrate that the proposed three-stage GNN consistently outperforms representative system and learning baselines, generalizes well to unseen numbers of UEs, RISs, and BSs, and maintains millisecond-level inference time. Besides, the results validate the effectiveness of the proposed design from both system and architectural perspectives. Moreover, PAs are shown to enhance SR and EE, and the performance gain is enlarged with increasing number of PAs.

Code understanding models increasingly rely on pretrained language models (PLMs) and graph neural networks (GNNs), which capture complementary semantic and structural information. We conduct a controlled empirical study of PLM-GNN hybrids for code classification and vulnerability detection tasks by systematically pairing three code-specialized PLMs with three foundational GNN architectures. We compare these hybrids against PLM-only and GNN-only baselines on Java250 and Devign, including an identifier-obfuscation setting. Across both tasks, hybrids consistently outperform GNN-only baselines and often improve ranking quality over frozen PLMs. On Devign, performance and robustness are more sensitive to the PLM feature source than to the GNN backbone. We also find that larger PLMs are not necessarily better feature extractors in this pipeline, and that the PLM choice has more impact than the GNN choice. Finally, we distill these findings into practical guidelines for PLM-GNN design choices in code classification and vulnerability detection.

In multi-agent reinforcement learning (MARL), the integration of a communication mechanism, allowing agents to better learn to coordinate their actions and converge on their objectives by sharing information. Based on an interaction graph, a subclass of methods employs graph neural networks (GNNs) to learn the communication, enabling agents to improve their internal representations by enriching them with information exchanged. With growing research, we note a lack of explicit structure and framework to distinguish and classify MARL approaches with communication based on GNNs. Thus, this paper surveys recent works in this field. We propose a generalized GNN-based communication process with the goal of making the underlying concepts behind the methods more obvious and accessible.

Graph anomaly detection aims to identify irregular patterns in graph-structured data. Most unsupervised GNN-based methods rely on the homophily assumption that connected nodes share similar attributes. However, real-world graphs often exhibit attribute-level heterophily, where connected nodes have dissimilar attributes. Our analysis of attribute-level heterophily graphs reveals two phenomena indicating that current approaches are not practical for unsupervised graph anomaly detection: 1) attribute similarities between connected nodes show nearly identical distributions across different connected node pair types, and 2) anomalies cause consistent variation trends between the graph with and without anomalous edges in the low- and high-frequency components of the spectral energy distributions, while the mid-part exhibits more erratic variations. Based on these observations, we propose NK-GAD, a neighbor knowledge-enhanced unsupervised graph anomaly detection framework. NK-GAD integrates a joint encoder capturing both similar and dissimilar neighbor features, a neighbor reconstruction module modeling normal distributions, a center aggregation module refining node features, and dual decoders for reconstructing attributes and structures. Experiments on seven datasets show NK-GAD achieves an average 3.29% AUC improvement.

Longitudinal neuroimaging is essential for modeling disease progression in Alzheimer's disease (AD), yet irregular sampling and missing visits pose substantial challenges for learning reliable temporal representations. To address this challenge, we propose SDE-HGNN, a stochastic differential equation (SDE)-driven spatio-temporal hypergraph neural network for irregular longitudinal fMRI connectome modeling. The framework first employs an SDE-based reconstruction module to recover continuous latent trajectories from irregular observations. Based on these reconstructed representations, dynamic hypergraphs are constructed to capture higher-order interactions among brain regions over time. To further model temporal evolution, hypergraph convolution parameters evolve through SDE-controlled recurrent dynamics conditioned on inter-visit intervals, enabling disease-stage-adaptive connectivity modeling. We also incorporate a sparsity-based importance learning mechanism to identify salient brain regions and discriminative connectivity patterns. Extensive experiments on the OASIS-3 and ADNI cohorts demonstrate consistent improvements over state-of-the-art graph and hypergraph baselines in AD progression prediction. The source code is available at https://anonymous.4open.science/r/SDE-HGNN-017F.

Motion planning through narrow passages remains a core challenge: sampling-based planners rarely place samples inside these narrow but critical regions, and even when samples land inside a passage, the straight-line connections between them run close to obstacle boundaries and are frequently rejected by collision checking. Decomposition-based planners resolve both issues by partitioning free space into convex cells -- every passage is captured exactly as a cell boundary, and any path within a cell is collision-free by construction. However, the number of candidate corridors through the cell graph grows combinatorially with environment complexity, creating a bottleneck in corridor selection. We present GNN-DIP, a framework that addresses this by integrating a Graph Neural Network (GNN) with a two-phase Decomposition-Informed Planner (DIP). The GNN predicts portal scores on the cell adjacency graph to bias corridor search toward near-optimal regions while preserving completeness. In 2D, Constrained Delaunay Triangulation (CDT) with the Funnel algorithm yields exact shortest paths within corridors; in 3D, Slab convex decomposition with portal-face sampling provides near-optimal path evaluation. Benchmarks on 2D narrow-passage scenarios, 3D bottleneck environments with up to 246 obstacles, and dynamic 2D settings show that GNN-DIP achieves 99--100% success rates with 2--280 times speedup over sampling-based baselines.

Edge-attributed multigraphs, in which multiple edges with distinct attributes connect the same pair of nodes, arise naturally in many real-world systems. In these graphs, effective learning requires preserving information from repeated interactions while distinguishing contributions from different neighbors. Existing neural network solutions for edge-attributed multigraphs remain limited: some lose information from repeated interactions, while others break permutation equivariance. To address this, we introduce \emph{neighbor-aware aggregation}, an operator that first combines multi-edge features for each neighbor and then aggregates across neighbors. This operator captures per-neighbor statistics that standard single-stage aggregation cannot represent. Building on this operator, we present MEGA-GNN, a model-agnostic message-passing framework for edge-attributed multigraphs. We show that MEGA-GNN is permutation equivariant and has the same asymptotic complexity as standard GNNs with edge updates. We evaluate our approach on datasets from social networks and financial transaction networks. Neighbor-aware aggregation consistently improves GNN performance and matches or surpasses state-of-the-art methods.