Reproduction

This empirical study is an independent reproduction of the dissociation Zhao reported in 2026. The shape of a large language model's chain-of-thought entropy trajectory predicts whether the final answer is correct, while the magnitude of its total entropy drop does not. The dissociation merits reproduction because the magnitude half rests on a single 300-problem run with one model at one seed, while the shape half was reported at full scale on both benchmarks and on a second model family. Registered at OSF before any confirmatory run, the reproduction crosses the complete GSM8K and MATH-500 benchmark test sets with four open-weight models including one reasoning-distilled model of a kind the original did not test. The shape signal replicates. The magnitude signal divides by setting. On the anchor model the accuracy gap between monotone and non-monotone chains is +9.6 percentage points on GSM8K and +27.5 on MATH-500, while the rank correlation of the total entropy drop with correctness is -0.018 on GSM8K and +0.414 on MATH-500. On the reasoning-distilled model the binary form of the shape signal fires on about one chain in a hundred, too few to estimate the registered contrast, while the graded violation count remains predictive there. In an exploratory comparison the final-step entropy alone outperforms the binary shape flag in all eight model-by-benchmark cells by ROC area, and in six or seven by the risk-coverage area the original reports, depending on an integration range the original does not state. The study contributes a reproduction of the shape signal at full test-set scale under seven documented protocol differences, a map of the settings where the magnitude signal holds and fails, and measurements of four protocol dependencies the original does not report.

Some aspects of AI development resemble a population process in which models are specialised, retrained on the output of peers, or combined by averaging weights. These practices lead to generations of models, in the biological sense studied by population genetics. Here, I develop this parallelism and interpret multigenerational model populations in terms of sexual and asexual reproduction, formally recombining the two fields. I test these analogies in an exact inheritance model, in trained networks (recurrent, feedforward and variational autoencoder generators) and in large language models, and show that they hold generally, with some measurable architecture-specific biases. Training recursively on model output is known to lead to model collapse, a process previously described as akin to genetic drift; I develop all that follows. A minimal model of a learner retrained on its parent's output reproduces the Wright-Fisher process exactly; verified real data added to each generation play the role of immigration, with the surprising finding that the absolute number of real data samples matters, not their share, exactly as in population genetics. Training a child on the average of its parents' outputs cancels the benefit of having several parents, matching blending inheritance (and reviving Jenkin's objection to Darwin), whereas combining parents so that each keeps its strongest contribution preserves it; merged language-model specialists exceeded every parent across seeds (the Fisher-Muller effect); and lineages become reproductively isolated, losing the ability to merge at all, when they have learned conflicting conventions and not when they have merely drifted apart. As AI societies become societies in time as well as in space, a mathematical framework for their inheritance acquires predictive power. Remarkably, that framework can be adapted almost wholesale from biology.

Artificial ontogeny, developmental encodings, robot reproduction, and inherited controllers are established research directions, yet a narrower question remains: can a newborn artificial agent exhibit measurable biparental heredity before learning, and can that dependence be isolated causally rather than inferred only from parent-offspring resemblance? We introduce Machine Zygote, a computational germline-soma architecture designed to test this question. Two parental germlines are independently mutated and recombined into a zygote that parameterizes development of an initially generic eight-module soma, which is then frozen and evaluated without learning. A preregistered 4 x 4 diallel of 640 offspring shows significant dam and sire dependence for five of six behavioral traits after Holm correction, with parental and interaction components accounting for 36-53 percent of modeled variance across five principal traits. In matched-background interventions (n=60), substituting one parental germline while holding recombination and stochastic background fixed causes phenotype shifts exceeding a same-parent re-mutation control for five of six traits for both parental channels. Recombination also yields excess transgressive offspring for speed and gait frequency. A preregistered developmental-dependence hypothesis is not supported: a quasistatic no-dynamics ablation preserves the mean phenotype distribution while altering parental variance structure. Thus the study supports causal biparental pre-learning heredity in this simulation, but not the stronger claim that recurrent developmental dynamics are necessary. It does not establish physical heredity, biological genetics, or autonomous evolution. The contribution is an intervention-centered framework and reproducible benchmark for separating heredity, development, stochastic variation, and post-birth learning.

Major life events have proven difficult to predict. Does this reflect limits of theory, data, and algorithms, or the large role of chance? We examine one outcome - having a child within three years - through a near-ideal setting for prediction: a data challenge where 147 researchers predicted births for Dutch residents aged 18-45, using survey data and full-population registers. Methods ranged from logistic regression to a large language model and transformers. Predictions were moderately accurate (best F1: register 0.59, survey 0.76); advanced models did not outperform classical ones; and the larger registers did not beat the survey. Simulating the stochastic biology of conception and pregnancy, we estimated a predictive ceiling (survey F1 ~ 0.86-0.94, register 0.88-0.96). Observed performance falls short of this ceiling, implicating imperfect data, methods, and unmodelled chance, while the ceiling itself shows that chance in reproduction alone sets a non-trivial limit on predicting individual lives.

Intracytoplasmic sperm injection (ICSI) operators frequently adjust the field-of-view (FOV) during procedures, which interrupts workflow and increases procedure time. Conventional microscopes require manual objective lens switching and illumination adjustments to achieve different FOV sizes. We propose an AI-based automatic FOV adjustment method integrated with a view-expansive microscope. This microscope enables the simultaneous acquisition of a large FOV and high-resolution images using a single objective lens through multiview imaging with galvanometer mirrors and high-speed vision, thereby eliminating the need for physical lens exchanges. Our method utilizes a long short-term memory (LSTM) model to predict the appropriate FOV size based on real-time analysis of the pipette's position and velocity, combined with the operator's gaze position. The AI model is trained using ICSI procedure data from an expert with over five years of micromanipulation experience. Experimental evaluation with novice operators reveals that the proposed automatic FOV adjustment system significantly improves the ICSI procedure speed, reducing the average task completion time from 60.5 to 48.0 s (p < 0.001). The experiments also demonstrate that this improvement enables novice operators to achieve ICSI working speeds equivalent to those of expert operators.

LeWorldModel trains a latent world model with a prediction loss and a single anti-collapse regulariser, and reports approximately 87% of goals reached on TwoRoom, its simplest diagnostic environment. We reproduce that result by independent reimplementation on roughly $25 of rented compute, with all evaluation on one laptop CPU. We reach 94.0% at the repository's evaluation goal offset, against 84.0% for the authors' own released checkpoint measured under our protocol on identical episodes, and we reproduce the reported representation result directly (position probe Pearson r = 0.9988 against a reported 0.996). Reaching that point required four conventions that determine the outcome and appear in no released configuration file: dense action gathering across a frameskip block, a programmatically-set action-encoder width, ImageNet pixel normalisation, and action z-scoring. A reproducer following the released configurations alone obtains a model whose predictor cannot converge. The evaluation protocol is itself contested by the released material. The paper's appendix and the repository's configuration specify different goal offsets and step budgets; on the authors' own weights these yield 14.0% and 84.0%, and only the configuration's values reproduce the reported figure. On fifty identical episodes, changing nothing but how the goal is constructed moves that checkpoint from 84.0% to 8.0%. Two findings generalise. One-step prediction accuracy does not predict long-horizon planning success: across three checkpoints spanning a sevenfold range in prediction error, including the authors' own, it orders short-horizon success monotonically and fails to order long-horizon success at all. And a batch normalisation layer inflated our reported validation loss by up to a factor of 300, concealing a training loss that was flat throughout.

Intracytoplasmic sperm injection (ICSI) requires advanced micromanipulation techniques but relies solely on visual feedback and involves frequent interface switching between pipette movement and injector operations. Existing haptic feedback systems primarily focus on pipette puncture forces and do not provide feedback on injector states. We developed an immersive micromanipulation system that unifies operational interfaces and provides McKibben-based haptic sensations to represent aspiration, discharge, and contact between the oocyte and pipette. Users operated both the pipette and injector with a single hand while receiving haptic sensations. A human-participant experiment revealed that the immersive operation interface improved micromanipulation speed and reduced cognitive workload of the micromanipulation compared with conventional methods. Additionally, McKibben-based haptic sensations improved overall system usability. The immersive micromanipulation system with McKibben-based haptic sensations successfully unified operational interfaces and reduced operator workload.

The rapid growth of large language models (LLMs) has resurrected age-old questions in sociolinguistics and world Englishes, such as who decides what counts as legitimate English, whose English is suspect etc. This paper examines how AI systems, their uses and discourse on them reflect, reinforce, and occasionally challenge (standard) language ideologies, which privilege Inner Circle norms and marginalize non-dominant Englishes. Drawing on evidence from empirical studies, media commentary, social media debates, and examples from AI outputs, the paper shows that AI technologies reproduce dominant language ideologies at different levels: training data, design protocols, evaluation benchmarks, user feedback and public commentary. The analysis uses the public controversy over AI-sounding language, especially the fixation on the word delve, to illustrate how speakers of English from the Global North police the English language norms of Global South English users. The paper also identifies what Christian Mair has called a "standardisation paradox": AI may homogenize English by privileging standard forms and at the same time pluralize Englishes through exposure to wide-ranging corpora and annotation work carried out by Global South users. In doing so, the paper argues that generative AI is reigniting long-standing debates in World Englishes about standardization, legitimacy, and the ownership of English, now playing out in algorithmic systems, model training, evaluation practices, and public discourse, where non-dominant Englishes are increasingly conflated with AI-generated speech. Discussing AI systems as a site where language ideologies are (re)produced, the paper argues for more inclusive design approaches that recognize the plurality of Englishes in order to address the real-world negative consequences of treating some as more legitimate than others.

Egocentric video offers rich manipulation experience for embodied AI, yet collecting diverse egocentric data across scenes, objects, motions, and embodiments remains costly. We present \method, an egocentric world-action simulator that synthesizes controllable, high-quality manipulation videos to expand scarce real-world training data. \method{} builds on a pretrained video generation prior and introduces two geometry-aware conditioning mechanisms. Online Anchored Projective Memory (OAPM) preserves a first-frame 3D scene anchor while periodically refreshing a recent state during autoregressive generation. Action-3D Rotary Position Embedding (A3D-RoPE) encodes end-effector motion with camera-aware 3D rotary coordinates, injecting action geometry into skeleton-to-video cross-attention for precise control. Together, these components improve visual fidelity, geometric stability, and action alignment in long egocentric rollouts. Moreover, augmenting 400 real trajectories with 400 \method-generated trajectories improves out-of-distribution real-robot success from 77% to 84% on single-arm tasks and from 53% to 70% on dual-arm tasks, demonstrating that the synthesized data substantially improve downstream WAM generalization.

Chat models sometimes commit to an answer and then produce reasoning that justifies it rather than deriving it -- even when the answer contradicts a task premise. We study a minimal probe: "I want to wash my car. The car wash is 100 meters away. Should I walk or drive?" Only drive works (the car must be at the car wash), yet models overwhelmingly recommend walking. (1) Behavioral reproduction: on Qwen3-8B across five system-prompt conditions (210 rollouts), the wrong commitment occurs in 85-100% of sampled rollouts per condition and 100% of greedy rollouts, in both thinking and non-thinking modes; a 4,096-token thinking budget does not repair it. (2) Preliminary activation-level evidence: probing hidden states with a pretrained, training-free activation oracle (no task-specific probe training) at positions before the answer text is emitted, "walk" read-outs exceed a neutral-context baseline (68% vs. 17%; walk-committing rollouts p=.005, drive-committing rollouts p=.005, Fisher exact) -- notably, rollouts that eventually answer drive also read as walk-leaning before commitment (5/6). The oracle's default on unrelated content is "drive" (83%), so the read-outs are not lexical bias; stratifying by literal walk/drive occurrence shows they are not text recovery either (spans containing "drive" still read out walk; in balanced lexical fields, per-rollout walk-majorities beat a per-prompt neutral baseline 15/22 vs. 1/8, p=.01; drive-committing rollouts 6/6, p=.002). Samples are small and the within-rollout positional gradient is not significant (p=.34); we frame these results as preliminary. (3) Methodological: with fixed oracle, activations, and positions, question wording alone moves a positive control from 2/16 (open question) to 11/16 (closed); negative oracle results are uninterpretable without per-wording positive controls.

Cleavage-stage embryo assessment in in vitro fertilization requires the integrated interpretation of cytoplasmic fragmentation, developmental stage, and blastomere symmetry. However, conventional visual assessment is affected by observer variability, particularly when fragmented regions are small, irregular, or low contrast. This study presents EMBRACE, a multi-task deep learning framework for jointly performing cytoplasmic-fragmentation segmentation, t2/t4 developmental-stage classification, and blastomere-symmetry grading from static cleavage-stage embryo microscopy images. EMBRACE combines a shared ResNet-50 backbone, a concatenation-based multi-scale feature-fusion (C-MSFF) module, a U-Net-style segmentation decoder, and two task-specific classification heads. After predefined inclusion and exclusion criteria, 9,137 annotated embryo images were divided into 7,309 training, 914 validation, and 914 held-out test images. On the held-out test set, EMBRACE achieved a Dice coefficient of 0.781 and an intersection over union of 0.677 for fragmentation segmentation. Developmental-stage classification achieved an accuracy of 0.995, macro-F1 of 0.994, and AUC of 1.000. Blastomere-symmetry grading achieved a balanced accuracy of 0.901, macro-F1 of 0.907, and quadratic weighted kappa of 0.859. These findings support the feasibility of combining spatially inspectable fragmentation localization with embryo-level morphology assessment in a single framework. External and prospective validation is required before clinical deployment.

Male infertility is a significant yet often underdiagnosed aspect of reproductive health, with semen analysis serving as the cornerstone of clinical evaluation. To address this problem, this study investigates the use of machine learning algorithms to classify male fertility status based on key semen parameters, i.e., sperm concentration, motility, and morphology, using the VISEM dataset. This dataset includes semen samples from 85 participants, classified into three categories, i.e., Fertile, Sub-Fertile, and Infertile, according to the World Health Organization's criteria. After pre-processing and feature engineering, the dataset was used to train and assess multiple classification models using the LazyPredict framework. Among the more than 40 algorithms tested, the Nearest Centroid classifier achieved an accuracy of 94.2%, outperforming other models such as Support Vector Machines and Quadratic Discriminant Analysis. The model's robustness was validated using 5-fold cross-validation and multiclass ROC-AUC analysis. This study illustrates that machine learning models can provide fast, accurate, and objective assessments of semen quality, potentially supporting clinical decision-making in andrology and assisted reproductive technologies. These findings emphasize the growing potential of machine learning to enhance fertility diagnostics and inform patient-specific treatment strategies.

Male infertility contributes substantially to the global infertility burden, and sperm analysis remains central to diagnosis, treatment planning, and assisted reproductive technology. Conventional semen evaluation, however, is labor-intensive, operator-dependent, and limited by inter- and intra-observer variability, motivating the development of objective and reproducible computational approaches. This review provides a comprehensive and perspective-oriented synthesis of artificial intelligence-driven sperm analysis, with a focus on computer vision, deep learning, multimodal fusion, robustness, and clinical translation. We first review task-specific methods for sperm detection and counting, tracking-based motility assessment, semantic and instance segmentation, morphology and defect classification, functional assessment, and genetic integrity evaluation. We then summarize public datasets, benchmarks, evaluation metrics, and emerging multimodal strategies that integrate microscopic images, time-lapse videos, CASA-derived parameters, DNA integrity assays, and clinical metadata. Beyond algorithmic performance, we discuss key barriers to real-world deployment, including data scarcity, cross-center domain shift, annotation inconsistency, interpretability, uncertainty calibration, privacy-preserving learning, and workflow integration. Finally, we outline a staged clinical translation roadmap spanning technical standardization, multicenter retrospective validation, silent prospective evaluation, human-in-the-loop clinical testing, ART outcome validation, regulatory approval, and post-market monitoring. By organizing the field from task-specific visual recognition to trustworthy multimodal reproductive intelligence, this review highlights both the progress and the unresolved challenges required to translate AI-driven sperm analysis into clinically meaningful decision support.

Large language model (LLM)-based software engineering agents are increasingly developed to resolve software issues by generating patches from issue reports and code repositories. Bug reproduction tests (BRTs) are an important building block for such agents and have been shown useful for patch validation. However, it remains unclear whether BRTs can also help the more central stage of patch generation. We first conduct a preliminary study and find that directly using advanced BRT generators to guide patch generation is not beneficial: fail-to-fail BRTs can mislead agents, while even fail-to-pass BRTs bring limited or negative gains. Our analysis reveals two reasons: fail-to-pass BRTs may cover only one manifestation of the reported issue, leading to partial patches, whereas fail-to-fail BRTs are unreliable as direct patch-generation targets. Motivated by these insights, we propose SWE-Doctor, a software issue resolution agent that guides patch generation with runtime diagnoses derived from multi-faceted BRT executions. SWE-Doctor first generates multi-faceted BRTs for different behavioral requirements stated in the issue, then executes and debugs these BRTs to construct runtime-grounded diagnosis records, and finally uses the diagnoses together with localization information inferred during BRT generation to guide patch generation and reduce partial patches. We evaluate SWE-Doctor on Python bug-fixing issues from the widely adopted SWE-bench Verified and SWE-bench Pro across five LLM backends. SWE-Doctor consistently outperforms existing agents across all 10 LLM-benchmark combinations, achieving average resolution rates of 75.7% on SWE-bench Verified and 59.4% on SWE-bench Pro. In particular, on the more challenging SWE-bench Pro, SWE-Doctor improves the average resolution rate by 8.0-8.9 percentage points over the baseline agents.

As Text-to-Image (T2I) jailbreak techniques evolve rapidly, existing benchmarks and reproduction workflows often struggle to keep pace. More importantly, T2I jailbreak evaluation is not a single prompt-level test, but a pipeline-level problem shaped by multiple stages, including prompt transformation, image generation, safety filtering, and multimodal judging. This makes results across papers difficult to reliably reproduce and fairly compare. To bridge this gap, we propose PixJail, a self-evolving paper-to-pipeline agent framework for reproducible T2I jailbreak evaluation. Given a T2I jailbreak paper and optional reference code, PixJail rapidly constructs a paper-specific attack module and a runnable evaluation pipeline under a unified contract, while faithfully reproducing the original experimental results. PixJail further maintains a memory bank that stores paper digests, attack evolution patterns, reusable templates, failure cases, and versioned artifacts, enabling future reproduction efforts to reuse prior experience. We reproduce eleven representative T2I jailbreak methods, including both code-available and code-unavailable papers. Under their original settings, our framework accurately recovers prior results with minimal error (2.1% average, 0% median). We hope that PixJail can serve as a unified foundation for future T2I jailbreak reproduction and evaluation, significantly reducing manual effort.

Tokenization is a foundational step in NLP pipelines, yet standard evaluation metrics such as fertility rate fail to capture morphological correctness for agglutinative languages. We present QuechuaTok, a systematic benchmark comparing four tokenization strategies - BPE, Unigram LM, WordPiece, and a morphology-aware PRPE tokenizer - for Southern Quechua (quz), a low-resource agglutinative language spoken by 8-10 million people in South America. Using a 200k-sentence corpus and the SQUOIA finite-state morphological analyzer (Rios, 2016) as silver standard, we evaluate three metrics: fertility rate, OOV rate, and morphological boundary accuracy (MorphAcc). Our results show that BPE achieves the lowest fertility rate (1.636 at 16k vocab) by memorizing surface word forms, while achieving only 6.67% MorphAcc. PRPE achieves 83.33% MorphAcc - the highest of all systems - demonstrating that fertility rate alone is insufficient to evaluate tokenizers for agglutinative languages. All code and models are publicly available at kaggle.com/code/macmaky/quechuatok

Hallucinations and opaque reasoning remain unacceptable failure modes for clinical LLMs. We present a production-grade GraphRAG stack that constrains answers to verifiable graph chain-of-thought paths in a heterogeneous, ~700K-node medical knowledge graph powering a fertility assistant. The core idea is targeted navigation: a directed Pruned Landmark Labeling (PLL) oracle provides exact distances for sub-millisecond feasibility checks and simple-path enumeration, while a lightweight AStarNet heuristic operates strictly within the PLL corridor to prioritize clinically plausible expansions. We score and pack a small, diverse set of paths (CUI/semantic-type overlap, length prior, provenance priors) to condition generation, yielding compact prompts and improved Time to First Token (TTFT). On fertility-focused queries, the hybrid (PLL+AStarNet) establishes a better latency/recall Pareto frontier than text-only RAG and single-component baselines, lowers TTFT, and reduces clinician-audited hallucinations while preserving explanation clarity. The result is a practical recipe for explainable, low-hallucination multi-hop medical reasoning ready for real-world deployment.

IVF pregnancy rates are routinely modeled using patient-level variables, while high-resolution laboratory environmental data remain underutilized. We show that this is a missed opportunity. Rather than relying on raw sensor averages, we engineer 55 context-aware temporal features, including rolling thermal stability, simultaneous temperature-humidity adherence, peak stress duration, and post-stress recovery speed, that capture the dynamics of incubator microenvironments. On 61 weeks of data from an Asian IVF clinic, these features reduce cross-validated prediction error to 1.27%, compared to 3-5% for raw averages. We then train a hierarchical Bayesian Beta regression model that shares environmental effects across an Asian and a Northern European clinic via partial pooling, while preserving site-specific baselines. On held-out data from the Northern European clinic, the model achieves R2 = 0.86 and a 64% error reduction for the 35-39 age group over a naive baseline, demonstrating that structured environmental monitoring contains clinically meaningful, transferable signal.

Male infertility is a major cause of couple infertility, often linked to abnormal sperm morphology. While deep learning models offer automated analysis, most lack interpretability, limiting their clinical adoption. This study proposes an attention-guided deep learning framework for sperm morphology classification. We combine a pretrained EfficientNet-B0 with a Convolutional Block Attention Module (CBAM) to focus on key areas of the sperm head, improving both accuracy and interpretability. Evaluated on the SMIDS and HuSHem public datasets, our model achieves accuracies of 90.2% and 93.9% (macro F1 scores of 0.913 and 0.948), outperforming SimpleCNN and standard EfficientNet-B0. Furthermore, we use Grad-CAM++ visualizations to highlight features influencing the model's decisions. The results demonstrate that this accurate and transparent framework is a practical tool for automated sperm analysis in fertility clinics.

One-step image editing is important for making text-guided editing fast, practical, and easy to deploy, but its underlying mechanism is still not fully understood. We revisit ChordEdit through reproduction, ablation, and simplification. Our analysis shows that a) the chord window $δ$ largely acts as an effective timestep shift from $t$ to $t - δ$; b) chord transport acts on high-noise images and mainly performs low-frequency semantic editing; and c) proximal alignment acts on low-noise images and complements it by adding high-frequency target details. In this view, ChordEdit naturally decomposes editing into a coarse low-frequency transport stage and a fine high-frequency alignment stage. These findings suggest a path toward prompt-conditioned dynamic timestep selection for adaptive image editing. All code and results can be found at \href{https://github.com/Harvard-AI-and-Robotics-Lab/ChordEdit-Reproduction}{link}.

The fertility trend in developing countries has experienced a significant decline in the last few decades; at the same time, the role of women in the workplace has improved. To have a better insight of the causality of the rate of women participation in the labor market on the total fertility rate in developing world, this paper divides the dataset of 115 developing countries in the period of 1991-2018 into four continents group (Africa, North/South America, Asia/Pacific, Europe) and then applies a data-driven panel data econometric procedure to mitigate omitted bias. The results suggest that the fertility behaviors of women in the North/South America continents are influenced by their career choice; meanwhile in society of other regions, other factors might be more important to women when thinking of having children. In conclusion, policymakers can reference to the paper and formulate policies to have more incentives in making reproductive decisions and further research in the field needs to consider family policies and patrilocality of developing countries as important data.

Conventional treatment policies map patient covariates to a single recommended intervention in order to maximize expected clinical outcomes. Although a rich body of causal inference methods has been developed to estimate such policies, point-valued recommendations can be highly sensitive to estimation uncertainty, model specification, and finite-sample variability, while typically providing little guidance about how confident one should be in the recommended action. In this work, we propose a set-valued policy learning paradigm for the multiple-treatment setting, in which policies output a set of plausible treatments rather than a single recommendation. This formulation enables intrinsic uncertainty quantification, with the size of the predicted set reflecting the degree of decision ambiguity. We extend the learning-to-defer framework to multiple treatments via a novel \textit{greatest Lower Bound} method, and introduce \textit{conformal policy learning}, which bridges the gap between unobserved ground-truth optimal treatments and estimated optimal treatment rules. Drawing on insights from the noisy-label literature, we develop a randomness-injection approach that guarantees marginal coverage without requiring assumptions on underlying black-box optimal treatment rules. Through experiments on synthetic data and a real-world application to In-Vitro Fertilization (IVF), we demonstrate that our methods produce robust and actionable policies that naturally incorporate clinical considerations while effectively balancing performance and reliability.

Accurate selection of bovine embryos is a challenging task, as current practice relies on a single expert assessment on the seventh day after insemination, resulting in high rates of pregnancy loss. Time-lapse videomicroscopy provides detailed information on early development, but is difficult to exploit because of complex motion patterns and time-consuming analysis. We propose TransFACT, a transformer-based framework for modeling early developmental stages and embryo transferability using 2D time-lapse videos from the first four days of development. TransFACT combines frame-level temporal features with stage-level representations, using developmental stages as auxiliary supervision to predict transferability on day four. Our experiments demonstrate that TransFACT, by leveraging an existing method designed for action recognition, achieves superior performance than its competitor in predicting embryo transferability.

The application of artificial intelligence (AI) in IVF has shown promise in improving consistency and standardization of decisions, but often relies on annotated data and does not make use of the multimodal nature of IVF data. We investigated whether foundational vision-language models can be fine-tuned to predict natural language descriptions of embryo morphology and development. Using a publicly available embryo time-lapse dataset, we fine-tuned PaliGemma-2, a multi-modal vision-language model, with only 1,000 images and corresponding captions, describing embryo morphology, embryonic cell cycle and developmental stage. Our results show that the fine-tuned model, InVitroVision, outperformed a commercial model, ChatGPT 5.2, and base models in overall metrics, with performance improving with larger training datasets. This study demonstrates the potential of foundational vision-language models to generalize to IVF tasks with limited data, enabling the prediction of natural language descriptions of embryo morphology and development. This approach may facilitate the use of large language models to retrieve information and scientific evidence from relevant publications and guidelines, and has implications for few-shot adaptation to multiple downstream tasks in IVF.

Embryo selection is one of multiple crucial steps in in-vitro fertilization, commonly based on morphological assessment by clinical embryologists. Although artificial intelligence methods have demonstrated their potential to support embryo selection by automated embryo ranking or grading methods, the overall impact of AI-based solutions is still limited. This is mainly due to the required adaptation of automated solutions to custom clinical data, reliance on time lapse incubators and a lack of interpretability to understand AI reasoning. The modern, informed patient is questioning expert decisions, particularly if the treatment is not successful. Thus, evidence-based decision justification in tasks like embryo selection would support transparent decision making and respectful patient communication. To support this aim, we hereby present an expert-annotated dataset consisting of embryo images and corresponding morphological description using natural language. The description contains relevant information on embryonic cell cycle, developmental stage and morphological features. This dataset enables the finetuning of modern foundational vision-language models to learn and improve over time with high accuracy. Predicted embryo descriptions can then be leveraged to automatically extract scientific evidence from literature, facilitating well-informed, evidence-based decision-making and transparent communication with patients. Our proposed dataset supports research in language-based, interpretable, and transparent automated embryo assessment and has the potential to enhance the decision-making process and improve patient outcomes significantly over time.

In young animals like poultry chicks (Gallus gallus), vocalisations convey information about affective and behavioural states. Traditional approaches to vocalisation analysis, relying on manual annotation and predefined categories, introduce biases, limit scalability, and fail to capture the full complexity of vocal repertoires. We introduce a computational framework for the automated detection, acoustic feature extraction, and unsupervised learning of chick vocalisations. Applying this framework to a dataset of newly hatched chicks, we identified two primary vocal clusters. We then tested our computational framework on an independent dataset of chicks exposed during embryonic development to vehicle or Valproic Acid (VPA), a compound that disrupts neural development and is linked to autistic-like symptoms. Clustering analysis on the experimental dataset confirmed two primary vocal clusters and revealed systematic differences between groups. VPA-exposed chicks showed an altered repertoire, with a relative increase in softer calls. VPA differentially affected call clusters, modulating temporal, frequency, and energy domain features. Overall, VPA-exposed chicks produced vocalisations with shorter duration, reduced pitch variability, and modified energy profiles, with the strongest alterations observed in louder calls. This study provides a computational framework for analysing chick vocalisations, advancing knowledge of early-life communication in typical and atypical vocal development.

Generative AI models reproduce the human biases in their training data and further amplify them through mechanisms such as mode collapse. The loss of diversity produces homogenization, which not only harms the minoritized but impoverishes everyone. We argue homogenization should be a central concern in AI safety. To meaningfully characterize homogenization in Large Language Models (LLMs), we introduce a framework that allows stakeholders to encode their context and value system. We illustrate our approach with an experiment that surfaces gender bias in an LLM (Claude 3.5 Haiku) on an open-ended story prompt. Building from queer theory, we formalize homogenization in terms of normativity. Borrowing language from feminist theory, we introduce the concept of xeno-reproduction as a class of tasks for mitigating homogenization by promoting diversity. Our work opens a collaborative line of research that seeks to understand and advance diversity in AI.

People use LLMs for reproductive-health questions, including abortion-related support. A response can sound supportive while answers reinforce harmful assumptions: judgment is likely, secrecy is safer, and support is limited. We introduce behavioral coherence evaluation, a design-time method that uses validation evidence from an established instrument to test relations among outputs. Using the Individual Level Abortion Stigma Scale, we prompted five LLMs to complete questionnaires for 627 personas and reviewed flagged patterns with five reproductive-health experts. Models scored personas lower on self-judgment but higher on worries about judgment; most made worries the highest-scoring dimension, although it was lowest in the ILAS reference sample. Four of five models reversed the reference direction by generating significantly higher worries about judgment scores for Black personas. Models defaulted to extreme secrecy after abortion despite varying stigma patterns across personas. Expert review showed that disclosure guidance requires context about relationship safety, legal risk, and trusted support.