Overview

AI for Science studies how computational methods can help researchers analyze data, build and test models, design experiments, and discover new explanations or materials. Approaches include scientific foundation models, retrieval and multi-agent systems, causal and symbolic methods, Bayesian optimization, and tools that connect AI to simulators, code, instruments, and high-performance computing. Benchmarks increasingly test scientific coding, image interpretation, simulator use, experimental design, and multi-step research workflows. AI often helps with well-specified tasks, but reliable open-ended discovery remains difficult: systems can make plausible errors, struggle with mechanistic reasoning, and need stronger verification, provenance, and evaluation against expert work.

Latest papers

161 papers10 papers in the last four weeks, down 23% on the four weeks before. 0.1% of all new papers.

Apr 30, 2026

Decoding Scientific Experimental Images: The SPUR Benchmark for Perception, Understanding, and Reasoning

We introduce SPUR, a comprehensive benchmark for scientific experimental image perception, understanding, and reasoning, comprising 4,264 question-answering (QA) pairs derived from 1,084 expert-curated images. SPUR features three key innovations: (1) Panel-Level Fine-Grained Perception: evaluating the visual perception of multimodal large language models (MLLMs) across three dimensions (numerical, morphological, and information localization) on six fine-grained panel types; (2) Cross-Panel Relation Understanding: utilizing complex images with an average of 14.3 panels per sample to evaluate MLLMs' ability to decipher intricate cross-panel relations; (3) Expert-Level Reasoning: assessment of qualitative and quantitative reasoning across five experimental paradigms to determine if models can infer conclusions from evidence as human experts do. Comprehensive evaluation of 20 MLLMs and four multimodal Chain-of-Thought (MCoT) methods reveals that current models fall significantly short of the expert-level requirements for scientific image interpretation, underscoring a critical bottleneck in AI for Science (AI4S) research.
Apr 30, 2026

Heterogeneous Scientific Foundation Model Collaboration

Agentic large language model systems have demonstrated strong capabilities. However, their reliance on language as the universal interface fundamentally limits their applicability to many real-world problems, especially in scientific domains where domain-specific foundation models have been developed to address specialized tasks beyond natural language. In this work, we introduce Eywa, a heterogeneous agentic framework designed to extend language-centric systems to a broader class of scientific foundation models. The key idea of Eywa is to augment domain-specific foundation models with a language-model-based reasoning interface, enabling language models to guide inference over non-linguistic data modalities. This design allows predictive foundation models, which are typically optimized for specialized data and tasks, to participate in higher-level reasoning and decision-making processes within agentic systems. Eywa can serve as a drop-in replacement for a single-agent pipeline (EywaAgent) or be integrated into existing multi-agent systems by replacing traditional agents with specialized agents (EywaMAS). We further investigate a planning-based orchestration framework in which a planner dynamically coordinates traditional agents and Eywa agents to solve complex tasks across heterogeneous data modalities (EywaOrchestra). We evaluate Eywa across a diverse set of scientific domains spanning physical, life, and social sciences. Experimental results demonstrate that Eywa improves performance on tasks involving structured and domain-specific data, while reducing reliance on language-based reasoning through effective collaboration with specialized foundation models.
Apr 29, 2026

SciHorizon-DataEVA: An Agentic System for AI-Readiness Evaluation of Heterogeneous Scientific Data

AI-for-Science (AI4Science) is increasingly transforming scientific discovery by embedding machine learning models into prediction, simulation, and hypothesis generation workflows across domains. However, the effectiveness of these models is fundamentally constrained by the AI-readiness of scientific data, for which no scalable and systematic evaluation mechanism currently exists. In this work, we propose SciHorizon-DataEVA, a novel agentic system to scalable AI-readiness evaluation of heterogeneous scientific data. At the evaluation-criteria level, we introduce the Sci-TQA2 principles, which organize AI-readiness into four complementary dimensions: Governance Trustworthiness, Data Quality, AI Compatibility, and Scientific Adaptability. Each dimension is decomposed into measurable atomic elements that enable fine-grained and executable assessment. To operationalize these principles at scale, we develop Sci-TQA2-Eval, a hierarchical multi-agent evaluation approach orchestrated through a directed, cyclic workflow. Our Sci-TQA2-Eval dynamically constructs dataset-aware evaluation specifications by combining lightweight dataset profiling, applicability-aware metric activation, and knowledge-augmented planning grounded in domain constraints and dataset-paper signals. These specifications are executed through an adaptive, tool-centric evaluation mechanism with built-in verification and self-correction, enabling scalable and reliable assessment across heterogeneous scientific data. Extensive experiments on scientific datasets spanning multiple domains demonstrate the effectiveness and generality of SciHorizon-DataEVA for principled AI-readiness evaluation.
Apr 28, 2026

Plausible but Wrong: A case study on Agentic Failures in Astrophysical Workflows

Agentic AI systems are increasingly being integrated into scientific workflows, yet their behavior under realistic conditions remains insufficiently understood. We evaluate CMBAgent across two workflow paradigms and eighteen astrophysical tasks. In the One-Shot setting, access to domain-specific context yields an approximately ~6x performance improvement (0.85 vs. ~0 without context), with the primary failure mode being silent incorrect computation - syntactically valid code that produces plausible but inaccurate results. In the Deep Research setting, the system frequently exhibits silent failures across stress tests, producing physically inconsistent posteriors without self-diagnosis. Overall, performance is strong on well-specified tasks but degrades on problems designed to probe reasoning limits, often without visible error signals. These findings highlight that the most concerning failure mode in agentic scientific workflows is not overt failure, but confident generation of incorrect results. We release our evaluation framework to facilitate systematic reliability analysis of scientific AI agents.
Apr 25, 2026

OceanPile: A Large-Scale Multimodal Ocean Corpus for Foundation Models

The vast and underexplored ocean plays a critical role in regulating global climate and supporting marine biodiversity, yet artificial intelligence has so far delivered limited impact in this domain due to a fundamental data bottleneck. Specifically, ocean data are highly fragmented across disparate sources and inherently exhibit multi-modal, high-noise, and weakly labeled characteristics, lacking unified schemas and semantic alignment. Although Multimodal Large Language Models (MLLMs) have achieved remarkable success in general domains, their application to ocean science remains severely constrained by the absence of large-scale, well-aligned multimodal datasets tailored to marine environments. To bridge this gap, we introduce OceanPile, a large-scale multimodal corpus designed for ocean foundation models. It comprises three key components: OceanCorpus, a unified collection integrating sonar data, underwater imagery, marine science visuals, and scientific text from diverse authoritative sources; OceanInstruction, a high-quality instruction dataset synthesized via a novel pipeline guided by a hierarchical Ocean Concept Knowledge Graph; and OceanBenchmark, a manually curated evaluation benchmark for rigorous assessment. We establish a multi-stage quality control process to ensure scientific validity and alignment across modalities. Experimental validation demonstrates significant performance improvements for models trained on our data. All datasets are publicly released to advance the field of marine artificial intelligence and empower domain-specific MLLMs.
Apr 22, 2026

Cooperative Profiles Predict Multi-Agent LLM Team Performance in AI for Science Workflows

Multi-agent systems built from teams of large language models (LLMs) are increasingly deployed for collaborative scientific reasoning and problem-solving. These systems require agents to coordinate under shared constraints, such as GPUs or credit balances, where cooperative behavior matters. Behavioral economics provides a rich toolkit of games that isolate distinct cooperation mechanisms, yet it remains unknown whether a model's behavior in these stylized settings predicts its performance in realistic collaborative tasks. Here, we benchmark 41 open-weight LLMs across six behavioral economics games and show that game-derived cooperative profiles robustly predict downstream performance in AI-for-Science tasks, where teams of LLM agents collaboratively analyze data, build models, and produce scientific reports under shared budget constraints. Models that effectively coordinate in games and invest in multiplicative team production (rather than greedy strategies) produce better scientific reports across three outcomes, accuracy, quality, and completeness. These associations hold after controlling for multiple factors, indicating that cooperative disposition is a distinct, measurable property of LLMs not reducible to general ability. Our behavioral games framework thus offers a fast diagnostic for screening cooperative fitness before costly multi-agent deployment.
Apr 16, 2026

An Axiomatic Benchmark for Evaluation of Scientific Novelty Metrics

The rigorous evaluation of the novelty of a scientific paper is, even for human scientists, a challenging task. With the increasing interest in AI scientists and AI involvement in scientific idea generation and paper writing, it also becomes increasingly important that this task be automatable and reliable, lest both human attention and compute tokens be wasted on ideas that have already been explored. Due to the challenge of quantifying ground-truth novelty, however, existing novelty metrics for scientific papers generally validate their results against noisy, confounded signals such as citation counts or peer review scores. These proxies can conflate novelty with impact, quality, or reviewer preference, which in turn makes it harder to assess how well a given metric actually evaluates novelty. We therefore propose an axiomatic benchmark for scientific novelty metrics. We first define a set of axioms that a well-behaved novelty metric should satisfy, grounded in human scientific norms and practice, then evaluate existing metrics across ten tasks spanning three domains of AI research. Our results reveal that no existing metric satisfies all axioms consistently, and that metrics fail on systematically different axioms, reflecting their underlying architectures. Additionally, we show that combining metrics of complementary architectures leads to consistent improvements on the benchmark, with per-axiom weighting achieving 90.1% versus 71.5% for the best individual metric, suggesting that developing architecturally diverse metrics is a promising direction for future work. We release the benchmark code as supplementary material to encourage the development of more robust scientific literature novelty metrics.
Apr 16, 2026

The Agentification of Scientific Research: A Physicist's Perspective

This article argues that the most important significance of the AI revolution, especially the rise of large language models, lies not simply in automation, but in a fundamental change in how complex information and human know-how are carried, replicated, and shared. From this perspective, AI for Science is especially important because it may transform not only the efficiency of research, but also the structure of scientific collaboration, discovery, publishing, and evaluation. The article outlines a gradual path from AI as a research tool to AI as a scientific collaborator, and discusses how AI is likely to fundamentally reshape scientific publication. It also argues that continuous learning and diversity of ideas are essential if AI is to play a meaningful role in original scientific discovery.
Apr 16, 2026

El Agente Forjador: Task-Driven Agent Generation for Quantum Simulation

AI for science promises to accelerate the discovery process. The advent of large language models (LLMs) and agentic workflows enables the expediting of a growing range of scientific tasks. However, most of the current generation of agentic systems depend on static, hand-curated toolsets that hinder adaptation to new domains and evolving libraries. We present El Agente Forjador, a multi-agent framework in which universal coding agents autonomously forge, validate, and reuse computational tools through a four-stage workflow of tool analysis, tool generation, task execution, and iterative solution evaluation. Evaluated across 24 tasks spanning quantum chemistry and quantum dynamics on five coding agent setups, we compare three operating modes: zero-shot generation of tools per task, reuse of a curriculum-built toolset, and direct problem-solving with the coding agents as the baseline. We find that our tool generation and reuse framework consistently improves accuracy over the baseline. We also show that reusing a toolset built by a stronger coding agent can reduce API cost and substantially raises the solution quality for weaker coding agents. Case studies further demonstrate that tools forged for different domains can be combined to solve hybrid tasks. Taken together, these results show that LLM-based agents can use their scientific knowledge and coding capabilities to autonomously build reusable scientific tools, pointing toward a paradigm in which agent capabilities are defined by the tasks they are designed to solve rather than by explicitly engineered implementations.
Apr 14, 2026

Artificial Intelligence Index Report 2026

Welcome to the ninth edition of the AI Index report. As AI continues to advance rapidly, the question becomes whether the systems built around it can keep up. Governance frameworks, evaluation methods, education systems, and the data infrastructure needed to track AI's impact are struggling to match the pace of the technology itself. That gap between what AI can do and how prepared we are to manage it runs through every chapter of this year's report. New in this edition, the report tracks how AI is being tested more ambitiously across reasoning, safety, and real-world task execution, and why those measurements are increasingly difficult to rely on. It also features new estimates of generative AI's economic value alongside emerging evidence of its labor market effects, an analytical framework on AI sovereignty, and a science chapter developed in collaboration with Schmidt Sciences. For the first time, the report features standalone chapters on AI in science and AI in medicine, reflecting AI's growing impact across these two domains.
Apr 13, 2026

Can AI Detect Life? Lessons from Artificial Life

Modern machine learning methods have been proposed to detect life in extraterrestrial samples, drawing on their ability to distinguish biotic from abiotic samples based on training models using natural and synthetic organic molecular mixtures. Here we show using Artificial Life that such methods are easily fooled into detecting life with near 100% confidence even if the analyzed sample is not capable of life. This is due to modern machine learning methods' propensity to be easily fooled by out-of-distribution samples. Because extra-terrestrial samples are very likely out of the distribution provided by terrestrial biotic and abiotic samples, using AI methods for life detection is likely to yield significant false positives.
Apr 10, 2026

COMPOSITE-Stem

AI agents hold growing promise for accelerating scientific discovery; yet, a lack of frontier evaluations hinders adoption into real workflows. Expert-written benchmarks have proven effective at measuring AI reasoning, but most at this stage have become saturated and only measure performance on constrained outputs. To help address this gap, we introduce COMPOSITE-STEM, a benchmark of 70 expert-written tasks in physics, biology, chemistry, and mathematics, curated by doctoral-level researchers. Our benchmark combines exact-match grading and criterion-based rubrics with an LLM-as-a-jury grading protocol, allowing more flexible assessment of scientifically meaningful outputs. Using an adapted multimodal Terminus-2 agent harness within the Harbor agentic evaluation framework, we evaluate four frontier models. The top-performing model achieves 21%, demonstrating that COMPOSITE-STEM captures capabilities beyond current agent reach. All tasks are open-sourced with contributor permission to support reproducibility and to promote additional research towards AI's acceleration of scientific progress in these domains.
Apr 8, 2026

An Analysis of Artificial Intelligence Adoption in NIH-Funded Research

Understanding the landscape of artificial intelligence (AI) and machine learning (ML) adoption across the National Institutes of Health (NIH) portfolio is critical for research funding strategy, institutional planning, and health policy. The advent of large language models (LLMs) has fundamentally transformed research landscape analysis, enabling researchers to perform large-scale semantic extraction from thousands of unstructured research documents. In this paper, we illustrate a human-in-the-loop research methodology for LLMs to automatically classify and summarize research descriptions at scale. Using our methodology, we present a comprehensive analysis of 58,746 NIH-funded biomedical research projects from 2025. We show that: (1) AI constitutes 15.9% of the NIH portfolio with a 13.4% funding premium, concentrated in discovery, prediction, and data integration across disease domains; (2) a critical research-to-deployment gap exists, with 79% of AI projects remaining in research/development stages while only 14.7% engage in clinical deployment or implementation; and (3) health disparities research is severely underrepresented at just 5.7% of AI-funded work despite its importance to NIH's equity mission. These findings establish a framework for evidence-based policy interventions to align the NIH AI portfolio with health equity goals and strategic research priorities.
Apr 8, 2026

Infrastructure First: Enabling Embodied AI for Science in the Global South

Embodied AI for Science (EAI4S) brings intelligence into the laboratory by uniting perception, reasoning, and robotic action to autonomously run experiments in the physical world. For the Global South, this shift is not about adopting advanced automation for its own sake, but about overcoming a fundamental capacity constraint: too few hands to run too many experiments. By enabling continuous, reliable experimentation under limits of manpower, power, and connectivity, EAI4S turns automation from a luxury into essential scientific infrastructure. The main obstacle, however, is not algorithmic capability. It is infrastructure. Open-source AI and foundation models have narrowed the knowledge gap, but EAI4S depends on dependable edge compute, energy-efficient hardware, modular robotic systems, localized data pipelines, and open standards. Without these foundations, even the most capable models remain trapped in well-resourced laboratories. This article argues for an infrastructure-first approach to EAI4S and outlines the practical requirements for deploying embodied intelligence at scale, offering a concrete pathway for Global South institutions to translate AI advances into sustained scientific capacity and competitive research output.
Apr 1, 2026

BloClaw: An Omniscient, Multi-Modal Agentic Workspace for Next-Generation Scientific Discovery

The integration of Large Language Models (LLMs) into life sciences has catalyzed the development of "AI Scientists." However, translating these theoretical capabilities into deployment-ready research environments exposes profound infrastructural vulnerabilities. Current frameworks are bottlenecked by fragile JSON-based tool-calling protocols, easily disrupted execution sandboxes that lose graphical outputs, and rigid conversational interfaces inherently ill-suited for high-dimensional scientific data.We introduce BloClaw, a unified, multi-modal operating system designed for Artificial Intelligence for Science (AI4S). BloClaw reconstructs the Agent-Computer Interaction (ACI) paradigm through three architectural innovations: (1) An XML-Regex Dual-Track Routing Protocol that statistically eliminates serialization failures (0.2% error rate vs. 17.6% in JSON); (2) A Runtime State Interception Sandbox that utilizes Python monkey-patching to autonomously capture and compile dynamic data visualizations (Plotly/Matplotlib), circumventing browser CORS policies; and (3) A State-Driven Dynamic Viewport UI that morphs seamlessly between a minimalist command deck and an interactive spatial rendering engine. We comprehensively benchmark BloClaw across cheminformatics (RDKit), de novo 3D protein folding via ESMFold, molecular docking, and autonomous Retrieval-Augmented Generation (RAG), establishing a highly robust, self-evolving paradigm for computational research assistants. The open-source repository is available at https://github.com/qinheming/BloClaw.
Mar 31, 2026

Scalable AI-assisted Workflow Management for Detector Design Optimization Using Distributed Computing

The Production and Distributed Analysis (PanDA) system, originally developed for the ATLAS experiment at the CERN Large Hadron Collider (LHC), has evolved into a robust platform for orchestrating large-scale workflows across distributed computing resources. Coupled with its intelligent Distributed Dispatch and Scheduling (iDDS) component, PanDA supports AI/ML-driven workflows through a scalable and flexible workflow engine. We present an AI-assisted framework for detector design optimization that integrates multi-objective Bayesian optimization with the PanDA--iDDS workflow engine to coordinate iterative simulations across heterogeneous resources. The framework addresses the challenge of exploring high-dimensional parameter spaces inherent in modern detector design. We demonstrate the framework using benchmark problems and realistic studies of the ePIC and dRICH detectors for the Electron-Ion Collider (EIC). Results show improved automation, scalability, and efficiency in multi-objective optimization. This work establishes a flexible and extensible paradigm for AI-driven detector design and other computationally intensive scientific applications.
Mar 30, 2026

Deep Research of Deep Research: From Transformer to Agent, From AI to AI for Science

With the advancement of large language models (LLMs) in their knowledge base and reasoning capabilities, their interactive modalities have evolved from pure text to multimodality and further to agentic tool use. Consequently, their applications have broadened from question answering to AI assistants and now to general-purpose agents. Deep research (DR) represents a prototypical vertical application for general-purpose agents, which represents an ideal approach for intelligent information processing and assisting humans in discovering and solving problems, with the goal of reaching or even surpassing the level of top human scientists. This paper provides a deep research of deep research. We articulate a clear and precise definition of deep research and unify perspectives from industry's deep research and academia's AI for Science (AI4S) within a developmental framework. We position LLMs and Stable Diffusion as the twin pillars of generative AI, and lay out a roadmap evolving from the Transformer to agents. We examine the progress of AI4S across various disciplines. We identify the predominant paradigms of human-AI interaction and prevailing system architectures, and discuss the major challenges and fundamental research issues that remain. AI supports scientific innovation, and science also can contribute to AI growth (Science for AI, S4AI). We hope this paper can help bridge the gap between the AI and AI4S communities.
Mar 26, 2026

Challenges and opportunities for AI to help deliver fusion energy

There is great potential for the application of AI tools in fusion research, and substantial worldwide benefit if fusion power is realised. However, using AI comes with its own challenges, many of which can be mitigated if responsible and robust methodologies are built into existing approaches. To do that requires close, long-term collaborations between fusion domain experts and AI developers and awareness of the fact that not all problems in fusion research are best tackled with AI tools. In April 2025, experts from academia, industry, UKAEA and STFC discussed how AI can be used to advance R&D in fusion energy at the first edition of The Economist FusionFest event. This Perspective is an expanded and updated summary of the round table discussion, providing more context and examples.
Mar 26, 2026

Toward Artificial Intelligence Enabled Earth System Coupling

Coupling constitutes a foundational mechanism in the Earth system, regulating the interconnected physical, chemical, and biological processes that link its spheres. This review examines how emerging artificial intelligence (AI) methods create new opportunities to enhance Earth system coupling and address long-standing limitations in multi-component models. Rather than surveying next-generation modelling efforts broadly, we focus specifically on how state-of-the-art AI techniques can strengthen cross-domain interactions, support more coherent multi-component representations, and enable progress toward unified Earth system frameworks. The scope extends beyond climate models to include any modelling system in which Earth spheres interact. We outline emerging opportunities, persistent limitations, and conceptual pathways through which AI may enhance physical consistency, interpretability, and integration across domains. In doing so, this review provides a structured foundation for understanding the role of AI in advancing coupled Earth system modelling.
Mar 26, 2026

Intern-S1-Pro: Scientific Multimodal Foundation Model at Trillion Scale

We introduce Intern-S1-Pro, the first one-trillion-parameter scientific multimodal foundation model. Scaling to this unprecedented size, the model delivers a comprehensive enhancement across both general and scientific domains. Beyond stronger reasoning and image-text understanding capabilities, its intelligence is augmented with advanced agent capabilities. Simultaneously, its scientific expertise has been vastly expanded to master over 100 specialized tasks across critical science fields, including chemistry, materials, life sciences, and earth sciences. Achieving this massive scale is made possible by the robust infrastructure support of XTuner and LMDeploy, which facilitates highly efficient Reinforcement Learning (RL) training at the 1-trillion parameter level while ensuring strict precision consistency between training and inference. By seamlessly integrating these advancements, Intern-S1-Pro further fortifies the fusion of general and specialized intelligence, working as a Specializable Generalist, demonstrating its position in the top tier of open-source models for general capabilities, while outperforming proprietary models in the depth of specialized scientific tasks.
Mar 22, 2026

The AI Scientific Community: Agentic Virtual Lab Swarms

In this short note we propose using agentic swarms of virtual labs as a model of an AI Science Community. In this paradigm, each particle in the swarm represents a complete virtual laboratory instance, enabling collective scientific exploration that mirrors real-world research communities. The framework leverages the inherent properties of swarm intelligence - decentralized coordination, balanced exploration-exploitation trade-offs, and emergent collective behavior - to simulate the behavior of a scientific community and potentially accelerate scientific discovery. We discuss architectural considerations, inter-laboratory communication and influence mechanisms including citation-analogous voting systems, fitness function design for quantifying scientific success, anticipated emergent behaviors, mechanisms for preventing lab dominance and preserving diversity, and computational efficiency strategies to enable large swarms exhibiting complex emergent behavior analogous to real-world scientific communities. A working instance of the AI Science Community is currently under development.
Mar 16, 2026

Bridging the Experimental Last Mile: Digitizing Laboratory Know-How for Safe AI-Assisted Support

While advances in materials informatics have accelerated the development of Self-Driving Laboratories (SDLs), human-led experiments remain standard in many educational and exploratory research laboratories. In specific lab settings, formal documentation alone is often insufficient for safe and reliable operation. We refer to the gap between formal documentation and reliable execution in such settings as the experimental last mile; this gap mainly involves site-specific operational know-how, including local rules, routine checks, procedural details, and safety-conscious actions that are can be verbalizable but are often under-documented in standard manuals. In this proof-of-concept study, we developed a human-in-the-loop AI assistant that combines first-person experimental video, multimodal AI, and retrieval-augmented generation (RAG). Using powder X-ray diffraction experiments and student-recorded video data as inputs, the system extracts site-specific laboratory knowledge from recorded procedures, including physical techniques and audible confirmation that conventional manuals could omit. It then provides grounded responses based on the resulting manual. To reduce the risk of unsupported outputs, the system employs a two-layer safety design: source restriction through RAG and strict system-prompt constraints. Instructor-based evaluation showed alignment with expected guidance for questions covered by the manual. For out-of-scope queries, the system appropriately refused to answer, indicating a reduced risk of hallucination. Expert evaluation further indicated that the generated advisory reports were useful and safe (utility: 3.25/4.00; safety: 4.00/4.00). These results suggest the feasibility of a framework for bridging the experimental last mile in which AI supports laboratory practice under explicit human supervision rather than replacing human judgment.
Mar 15, 2026

AI Can Learn Scientific Taste

Scientific discovery depends on expert judgement and foresight, which we call scientific taste: the ability to judge and propose research ideas with the potential for long-term scientific impact. Scientific taste is largely concentrated among highly experienced researchers, whose expertise is usually limited to a few specialised fields. If AI could learn scientific taste, it could reduce reliance on human experts and accelerate scientific discovery. Whether AI can learn this ability remains an open question. We introduce Reinforcement Learning from Community Feedback (RLCF) to learn judgement and ideation. Scientific Judge learns from community feedback, such as citations. Scientific Thinker learns to propose research ideas with high potential impact. Experiments show that Scientific Judge outperforms strong LLM baselines and that learned judgement generalises to future-year papers, other community metrics, and unseen fields. Furthermore, Scientific Thinker proposes research ideas with higher potential impact than those proposed by baselines. These results suggest that AI can learn scientific taste, marking an important step towards AI systems that could help accelerate scientific discovery.
Mar 15, 2026

STAG-CN: Spatio-Temporal Apiary Graph Convolutional Network for Disease Onset Prediction in Beehive Sensor Networks

Honey bee colony losses threaten global pollination services, yet current monitoring systems treat each hive as an isolated unit, ignoring the spatial pathways through which diseases spread across apiaries. This paper introduces the Spatio-Temporal Apiary Graph Convolutional Network (STAG-CN), a graph neural network that models inter-hive relationships for disease onset prediction. STAG-CN operates on a dual adjacency graph combining physical co-location and climatic sensor correlation among hive sessions, and processes multivariate IoT sensor streams through a temporal--spatial--temporal sandwich architecture built on causal dilated convolutions and Chebyshev spectral graph convolutions. Evaluated on the Korean AI Hub apiculture dataset (dataset #71488) with expanding-window temporal cross-validation, STAG-CN achieves an F1 score of 0.607 at a three-day forecast horizon. An ablation study reveals that the climatic adjacency matrix alone matches full-model performance (F1,=,0.607), while the physical adjacency alone yields F1,=,0.274, indicating that shared environmental response patterns carry stronger predictive signal than spatial proximity for disease onset. These results establish a proof-of-concept for graph-based biosecurity monitoring in precision apiculture, demonstrating that inter-hive sensor correlations encode disease-relevant information invisible to single-hive approaches.
Mar 14, 2026

Research Paradigm of Materials Science Tetrahedra with Artificial Intelligence

The classical material tetrahedron that represents the Structure-Property-Processing-Performance-Characterization relationship is the most important research paradigm in materials science so far. It has served as a protocol to guide experiments, modeling, and theory to uncover hidden relationships between various aspects of a certain material. This substantially facilitates knowledge accumulation and material discovery with desired functionalities to realize versatile applications. In recent years, with the advent of artificial intelligence (AI) techniques, the attention of AI towards scientific research is soaring. The trials of implementing AI in various disciplines are endless, with great potential to revolutionize the research diagram. Despite the success in natural language processing and computer vision, how to effectively integrate AI with natural science is still a grand challenge, bearing in mind their fundamental differences. Inspired by these observations and limitations, we delve into the current research paradigm dictated by the classical material tetrahedron and propose two new paradigms to stimulate data-driven and AI-augmented research. One tetrahedron focuses on AI for materials science by considering the Matter-Data-Model-Potential-Agent diagram. The other demonstrates AI research by discussing Data-Architecture-Encoding-Optimization-Inference relationships. The crucial ingredients of these frameworks and their connections are discussed, which will likely motivate both scientific thinking refinement and technology advancement. Despite the widespread enthusiasm for chasing AI for science, we must analyze issues rationally to come up with well-defined, resolvable scientific problems in order to better master the power of AI.
Mar 11, 2026

SciNav: A General Agent Framework for Scientific Coding Tasks

Autonomous science agents built on large language models (LLMs) are increasingly used to generate hypotheses, design experiments, and produce reports. However, prior work mainly targets open-ended scientific problems with subjective outputs that are difficult to evaluate. Scientific coding benchmarks, by contrast, provide executable outputs for objective assessment. Existing approaches remain engineering-driven pipelines, revealing the need for structured, end-to-end science agent frameworks for scientific coding tasks. We address this gap by focusing on scientific coding tasks, where evaluation can be made rigorously, and introducing an agent framework SciNav (Scientific Navigator) that enables more effective solution exploration. Our framework is designed to operate under constrained search budgets, moving beyond reliance on pre-defined success metrics and prolonged search cycles. Inspired by findings that comparative judgments often reveal finer-grained quality differences and therefore provide greater discriminative power than absolute scoring, our framework leverages pairwise relative judgments within a tree search process to select top-K promising solution branches, prune low-potential ones, and progressively narrow down the solution candidates on the selected branches guided by relative comparisons. We demonstrate our agent's effectiveness across different types of tasks on two benchmarks. Experiments show that SciNav significantly outperforms direct prompting and prior agents like OpenHands and Self-Debug across different base models, task types, and difficulty levels, and exceeds different frontier comparators such as random selection and LLM absolute scoring. These results confirm the strength of our agent design and highlight the effectiveness of relative judgment-guided top-K search for high-quality scientific coding, marking a step toward more practical science agents.
Mar 10, 2026

MITRA: An AI Assistant for Knowledge Retrieval in Physics Collaborations

Large-scale scientific collaborations, such as the Compact Muon Solenoid (CMS) at CERN, produce a vast and ever-growing corpus of internal documentation. Navigating this complex information landscape presents a significant challenge for both new and experienced researchers, hindering knowledge sharing and slowing down the pace of scientific discovery. To address this, we present a prototype of MITRA, a Retrieval-Augmented Generation (RAG) based system, designed to answer specific, context-aware questions about physics analyses. MITRA employs a novel, automated pipeline using Selenium for document retrieval from internal databases and Optical Character Recognition (OCR) with layout parsing for high-fidelity text extraction. Crucially, MITRA's entire framework, from the embedding model to the Large Language Model (LLM), is hosted on-premise, ensuring that sensitive collaboration data remains private. We introduce a two-tiered vector database architecture that first identifies the relevant analysis from abstracts before focusing on the full documentation, resolving potential ambiguities between different analyses. We demonstrate the prototype's superior retrieval performance against a standard keyword-based baseline on realistic queries and discuss future work towards developing a comprehensive research agent for large experimental collaborations.
Mar 10, 2026

ToolRosella: Translating Code Repositories into Standardized Tools for Scientific Agents

Large Language Model (LLM)-based agent systems are increasingly used for scientific tasks, yet their practical capability remains constrained by the narrow scope of manually curated tools they can invoke. Much scientific computational functionality already exists in open-source code repositories, but these resources remain difficult to standardize, operationalize, and invoke reliably for agent use. Here we present ToolRosella, a framework that automatically transforms heterogeneous scientific code repositories into standardized, agent-invocable tools. ToolRosella combines repository analysis, tool interface construction, execution testing, and iterative repair to address the problem of repository-to-tool standardization. Across 122 GitHub repositories spanning 35 subdisciplines in six domains, ToolRosella reaches a 61.5% repository conversion success rate after iterative repair, with a 4.4 speedup over human engineers. The resulting 1,580 callable tools support a downstream task success rate of 84.0% and improve performance when integrated into other agent frameworks, particularly on tasks whose required tools are absent from fixed, curated inventories.
Mar 10, 2026

Logos: An evolvable reasoning engine for rational molecular design

The discovery and design of functional molecules remain central challenges across chemistry,biology, and materials science. While recent advances in machine learning have accelerated molecular property prediction and candidate generation, existing models tend to excel either in physical fidelity without transparent reasoning, or in flexible reasoning without guarantees of chemical validity. This imbalance limits the reliability of artificial intelligence systems in real scientific design workflows.Here we present Logos, a compact molecular reasoning model that integrates multi-step logical reasoning with strict chemical consistency. Logos is trained using a staged strategy that first exposes the model to explicit reasoning examples linking molecular descriptions to structural decisions, and then progressively aligns these reasoning patterns with molecular representations. In a final training phase, chemical rules and invariants are incorporated directly into the optimization objective, guiding the model toward chemically valid outputs. Across multiple benchmark datasets, Logos achieves strong performance in both structural accuracy and chemical validity, matching or surpassing substantially larger general-purpose language models while operating with a fraction of their parameters. Beyond benchmark evaluation, the model exhibits stable behaviour in molecular optimization tasks involving multiple, potentially conflicting constraints. By explicitly exposing intermediate reasoning steps, Logos enables human inspection and assessment of the design logic underlying each generated structure. These results indicate that jointly optimizing for reasoning structure and physical consistency offers a practical pathway toward reliable and interpretable AI systems for molecular science, supporting closer integration of artificial intelligence into scientific discovery processes.
Mar 5, 2026

SIQA: Toward Reliable Scientific Image Quality Assessment

Scientific images fundamentally differ from natural and AI-generated images in that they encode structured domain knowledge rather than merely depict visual scenes. Assessing their quality therefore requires evaluating not only perceptual fidelity but also scientific correctness and logical completeness. However, existing image quality assessment (IQA) paradigms primarily focus on perceptual distortions or image-text alignment, implicitly assuming that depicted content is factually valid. This assumption breaks down in scientific contexts, where visually plausible figures may still contain conceptual errors or incomplete reasoning. To address this gap, we introduce Scientific Image Quality Assessment (SIQA), a framework that models scientific image quality along two complementary dimensions: Knowledge (Scientific Validity and Scientific Completeness) and Perception (Cognitive Clarity and Disciplinary Conformity). To operationalize this formulation, we design two evaluation protocols: SIQA-U (Understanding), which measures semantic comprehension of scientific content through multiple-choice tasks, and SIQA-S (Scoring), which evaluates alignment with expert quality judgments. We further construct the SIQA Challenge, consisting of an expert-annotated benchmark and a large-scale training set. Experiments across representative multimodal large language models (MLLMs) reveal a consistent discrepancy between scoring alignment and scientific understanding. While models can achieve strong agreement with expert ratings under SIQA-S, their performance on SIQA-U remains substantially lower. Fine-tuning improves both metrics, yet gains in scoring consistently outpace improvements in understanding. These results suggest that rating consistency alone may not reliably reflect scientific comprehension, underscoring the necessity of multidimensional evaluation for scientific image quality assessment.