Multi-Label Classification

Multi-label topic assignment for user-generated content (UGC) -- including product reviews and buyer-seller conversations -- poses unique scalability challenges in large-scale e-commerce due to informal language, extreme label sparsity, and rapidly evolving taxonomies. While utilizing Large Language Models (LLMs) as labeling oracles to distill ground-truth data has emerged as an industry standard to bypass prohibitive manual annotation costs, determining the optimal, low-latency architecture for the resulting student models remains an open challenge. To address this, we conduct a comprehensive evaluation across Small Language Model (SLM) parameter scales (1B, 4B, and 8B) and architectural paradigms (causal generative versus bidirectional discriminative). Comparing generative text-to-label classifiers against discriminative baselines (DeBERTa-V3 and ModernBERT), our analysis reveals a crucial data-dependent trade-off: while discriminative models outperform ultra-lightweight generative models on structured product reviews, even the smallest 1B generative model surpasses discriminative baselines on complex, multi-turn conversational data. Furthermore, generative models maintain robust performance under massive label-set expansion (up to 112 topics) and severe long-tail distributions, whereas discriminative baselines suffer a 35% drop in Macro-F1 at scale. Finally, we detail the successful production deployment of these optimized models across both product review and conversational domains, demonstrating strict latency compliance and tangible business impact at a global marketplace scale.

Traditional approaches for automated bug detection in video games, such as manual testing, can be beneficial for the improvement of quality assurance, but they can be expensive and time-consuming. The scarce number of tools available to detect multiple perceptual bugs in the same video frame introduces detection challenges for automated bug detection tools in real-world scenarios. We propose a deep learning model for multi-label perceptual bug detection and compare it against video classification models such as Inflated 3D ConvNet and 3D ResNet. Our proposed model, ResNet-BiLSTM, achieved an F1 score of 85.78% on the benchmark dataset. Our results demonstrated that temporal dependency modelling is beneficial for accurate video-based bug detection. We believe this work with multi-label perceptual bug detection on gameplay videos will help save resources spent on manual testing workloads in video games. Furthermore, we introduce a new dataset with multi-label perceptual bugs in this work. The dataset contains 77,969 video clips across different genres of games with approximately 1.2 million frames, containing combinations from 5 classes of bugs in the same video frame.

Code-switched (CS) speech leaks through the monolingual language identification (LID) filters used to curate massive speech corpora, calling for CS-aware LID (CS-LID). We formulate utterance-level CS-LID as multi-label language-set prediction and propose a set generator that directly outputs the languages in an utterance, comparing it against atomic-pair and score-based classification baselines. Oracle Top-k is the strongest baseline, but thresholding fails because no single threshold separates CS from monolingual speech. Our set generator predicts the correct language count on unseen pairs without assuming the number of languages, but underperforms oracle Top-k in exact set accuracy. Our analysis identifies the key obstacles to robust CS-LID: oracle cardinality, threshold instability, language bias in CS training data, and the synthetic-to-real gap.

Reliable positioning, navigation, and timing support intelligent transportation, autonomous systems, and space-air-ground integrated networks. However, global navigation satellite system (GNSS) jamming recognizers that treat each mixture as a separate class are difficult to extend to new combinations. Therefore, this paper proposes SPOC-Net, which decomposes the recognition problem into identifying a set of basic jamming components. Multi-resolution time-frequency features and learned component queries provide evidence for each component type. A high-resolution branch estimates the number of active types, and a structured decoder combines this estimate with component evidence to select a valid set. For training, measured single-component records are the only physical samples used in gradient optimization. Their associated clean in-phase and quadrature (IQ) sequences are combined on demand during training to produce labeled mixtures with different relative powers and jamming-to-noise ratios. Separate measured mixtures from ten training-listed compositions support model selection and decoder calibration; six other compositions are reserved for final testing. Evaluation on 14,220 independently generated, conductively combined, and recorded radio frequency mixtures yields 80.69% exact-set accuracy and a 92.84% micro-averaged F1 score. On combinations excluded from model development, SPOC-Net achieves 80.89% exact-set accuracy, exceeding the strongest comparison method by 18.77 percentage points under the reported protocols.

Molecular property prediction is central to drug development and materials discovery, but experiments are costly and labeled data are scarce. Context-aware methods use auxiliary assay labels to support few-shot prediction, and recent work supervises property relations with label agreement. However, label agreement is sensitive to class marginals and does not directly capture dependence between properties. We propose CalibHyper, a chance-corrected relational hypergraph method based on the joint label distribution. CalibHyper subtracts an independence baseline from the ordered four-state label distribution and shrinks the residual according to the number of joint observations. A swap-equivariant relation head estimates these residuals, which choose the auxiliary properties for each molecule and set the sign and weight of their hyperedge messages. On thirteen datasets from five benchmarks, in both 1-shot and 10-shot settings, CalibHyper and its ablation settings achieve ROC-AUC competitive with the strongest reported results.

Identifying the set of monitored websites in mixed encrypted traffic is challenging because an individual flow often provides only partial evidence of website identity. To address this challenge, we propose FlowAtom, which constructs shared prototypes, called Atoms, from flow representations without website labels. Specifically, FlowAtom pretrains a flow encoder on external unlabeled traffic and aggregates Atom responses across flows within each observation window into a fixed-dimensional, permutation-invariant representation for monitored website-set prediction. Across Direct HTTPS, Trojan, and VMess, FlowAtom achieves micro-F1 scores of 97.82%, 94.43%, and 93.92% in closed-world evaluation, respectively, and consistently outperforms the evaluated baselines in open-world evaluation on windows containing monitored visits. The code is available at https://github.com/aimafan123/FlowAtom.

We develop a multi-label Polish content-safety classifier by fine-tuning allegro/herbert-base-cased (124M) across five categories (hate, vulgarity, sexual content, crime, self-harm) using a Focal + R-Drop objective, and evaluate the resulting model against Bielik Guard (Sójka) on the shared out-of-distribution Gadzi Język benchmark. Both systems are given per-category threshold tuning on the same calibration split. Under that matched protocol our model holds a small but statistically significant lead in micro F1, while an apparent macro-F1 lead does not survive: it was an artifact of comparing a tuned model against an untuned one. We also report what that micro figure is worth. Because Gadzi Język is 97% crime-positive, a classifier that flags crime on every input and nothing else already scores 0.910 micro F1 on the same test split, so micro separates neither system from a degenerate strategy and macro is the column that does. Per-category and per-protocol figures are reported in Section 4. The residual out-of-distribution gap is one of calibration rather than discrimination. Ranking quality stays high while positive probabilities collapse, and per-category temperature scaling recovers the loss where Platt scaling and isotonic regression do not. That recovery turns out to be conditional on the calibration set containing safe text. Gadzi Język contains almost none, so thresholds fitted on it flag crime on every safe input, and a balanced refit buys a deployable operating point at the cost of adversarial recall. We report both operating points rather than only the flattering one. Two changes that are standard practice, per-class cost-sensitive weighting and mean pooling, each raise in-distribution macro F1 while lowering the out-of-distribution figure, which indicates that robustness has to be selected for directly rather than inherited from in-distribution accuracy.

A key factor in deciding whether to trust an automatic prediction is its confidence score, which should be calibrated to match the actual probability of the prediction being correct. Most confidence calibration metrics target binary or multi-class tasks, while multi-label calibration remains largely underexplored. Multi-label classification tasks, such as assigning medical codes to clinical notes or determining news topics, are usually dominated by a large number of negatives, i.e., labels that do not apply. We show that existing binning schemes to compute label-wise expected calibration error either underestimate the error, simply reflect label frequency, or suffer from many bins with very few instances. To achieve trustworthy label-wise calibration errors, we propose a new binning scheme that gives equal weight to positive and negative label assignments. Our empirical study demonstrates that in contrast to existing binning schemes, our new scheme results in meaningful estimates of calibration error in hierarchical and in extreme multi-label classification. We also show that calibrating confidence scores of large language models for multi-label predictions is an open challenge. Our detailed analysis lays the foundation for further research by providing a solid evaluation metric for measuring calibration in multi-label classification.

How should natural language processing models be selected and adapted for global health literature in environments where annotated data and computational resources are limited? This thesis investigates these challenges through experiments on semantic tag discovery, named entity recognition (NER), and multi-label topic classification. First, skip-gram word2vec models trained on progressively larger specialized corpora are compared with BioWordVec to assess how corpus size and domain context influence tag discovery. Vocabulary coverage and qualitative evaluation indicate that broader coverage does not necessarily yield more useful domain-specific associations. The analysis then turns to entity extraction, comparing convolutional spaCy models with a RoBERTa-based transformer on 1,000 annotated sentences. Under a lenient scoring protocol, the transformer achieves 0.80 micro-F1 versus 0.65-0.69 for convolutional models, but takes 82 seconds rather than 5-6 seconds. This trade-off motivates fine-tuning convolutional models and integrating a disease recognizer that achieves 81.33% test F1 on the NCBI Disease Corpus. Combined with PDF preprocessing, entity filtering, and MeSH enrichment, the resulting pipeline supports document-level indexing. To complement entity extraction with thematic annotation, MiniLM-based few-shot classification is compared with BART-MNLI zero-shot inference across 50 topics and 1,000 handcrafted test sentences. BART-MNLI achieves 95.2% single-label accuracy versus 59%; reported multi-label accuracies are 88% and 32% under partly manual assessment. However, its higher inference cost limits practical integration. The results show where domain specialization and lightweight adaptation offer practical value, and where transformer accuracy justifies higher inference costs, providing an empirical basis for building knowledge systems under resource constraints.

Large-scale multi-label text classification assigns a small subset of relevant labels to each document from a vocabulary containing thousands or tens of thousands of candidate labels. Although pretrained language models have improved semantic text representations, most representation-based approaches center their prediction pipelines on a primary encoder or combine auxiliary features within a single ranker. The complementarity between heterogeneous language models therefore remains insufficiently explored. We propose DualMLC, a dual-branch framework that processes the same document through an autoregressive decoder-only language model and a bidirectional encoder. Each branch maintains its own representation pathway and independently estimates relevance scores over the shared label space. DualMLC combines the two score vectors through late logit fusion, allowing shared evidence to reinforce relevant labels and branch-specific evidence to compensate for limitations in the other branch's representation. DualMLC achieves state-of-the-art results on three widely used large-scale multi-label text classification benchmarks. Ablation results further confirm that integrating the heterogeneous predictors produces stronger rankings than either branch alone. The source code is publicly available at https://github.com/huiyegit/DualMLC.

Automated prediction of Enzyme Commission (EC) numbers plays a central role in functional annotation and computational drug discovery. However, standard multi-label machine learning pipelines frequently rely on default decision thresholds (t=0.50), assuming balanced prior distributions across target heads. In this study, we present a systematic empirical diagnostic of uncalibrated fixed decision boundaries operating under severe class imbalance across N = 14,096 annotated compounds categorized into six primary EC classes (EC1-EC6). Our results highlight a pronounced Accuracy Paradox: while the multi-label system achieves a deceivingly high mean accuracy of 77.16%, the macro F1-score (0.3976) and macro recall (0.3872) reveal severe predictive breakdown. Majority target classes suffer from hyper-sensitivity and over-prediction, whereas minority classes exhibit sharp recall decay, culminating in a total decision boundary collapse for EC6 (Recall = 0.00%) despite underlying discriminative power (ROC-AUC = 0.5857). Feature correlation analysis further reveals high linear redundancy among topological indices relative to fingerprint density metrics. Ultimately, this diagnostic study demonstrates that standard point predictions mask critical errors in bioinformatics workflows. We establish target-specific threshold optimization and post-hoc conformal calibration as essential, open-source post-processing safeguards for reliable applied machine learning and deep learning architectures.

Incomplete multi-view multi-label learning requires not only robust semantic aggregation from partially observed views, but also label-aware exploitation of view-specific evidence. Existing approaches usually emphasize either shared representation learning or decision-level fusion. The former improves robustness against missing views, yet tends to compress label-discriminative view-specific cues into a single latent representation. The latter preserves individual view predictions, but often relies on fixed or globally learned fusion weights, ignoring that different labels of different instances may require different views. To address these limitations, this paper presents V2L, a unified representation-decision framework for incomplete multi-view multi-label classification. On the representation side, V2L constructs semantically consistent variational posteriors from incomplete views through a perturbation-aware encoding mechanism, which provides a stable shared semantic basis. On the decision side, V2L introduces an active view-label relevance modeling strategy that estimates instance-wise and label-wise view contributions, allowing each label prediction to adaptively select useful view-specific evidence. From the perspective of model architecture, these two important strategies are integrated into a unified framework through a hybrid fusion architecture, simultaneously meeting the requirements of cross-view semantic consistency and representational complementarity. Extensive experiments under both incomplete and complete settings show that V2L achieves leading performance on five benchmarks. Code is available at: https://github.com/justsmart/V2L.

Deformability cytometry (DC) is a type of imaging flow cytometry, which uses a camera-equipped device to measure cellular stiffness in addition to other cellular properties at high throughput. Cellular properties such as area and elongation can identify cell types, but this requires prior knowledge of distinguishing properties and cannot be applied to clinically important cell aggregates. Using DC data, we evaluated conventional multi-class (MC) classification and introduced a multi-label (ML) approach for identifying blood cells and their aggregates. In particular, an ML classifier can simultaneously assign multiple cell-type labels to a single imaged event. We show that, unlike MC classification, ML classification can identify cell aggregates not represented in the training data. It also avoids the need for exhaustive, strictly defined aggregate labels, thereby simplifying and speeding up annotation. Since automated blood analyzers do not reliably analyze cell aggregates, our approach may help address this clinical gap.

Antimicrobial peptides (AMPs) often act against multiple pathogen classes, making multi-label activity prediction a more realistic screening target than binary antimicrobial classification. The ESCAPE benchmark formalizes this setting, but leading approaches typically rely on multimodal, structure-conditioned deep models that are costly to train and tune. We show that a simple, sequence-only pipeline can match and surpass these methods by combining 330 interpretable sequence descriptors with TabPFN, a tabular foundation model that performs in-context prediction in a single forward pass without gradient-based training or hyperparameter search. On ESCAPE (82,359 peptides; five labels), a label-powerset TabPFN model achieves mAP-5 = 77.8%, improving on the previously best reported 72.1%. A probabilistic classifier chain is the first method to match or exceed the best published average precision on each of the five labels simultaneously. The gains persist under the prior state-of-the-art single-fold training protocol, indicating they are not a training-set-size artefact, and are largest for remote homologues (+11.2 points below 30% sequence identity). Ablations further show that predicted structure is unnecessary at inference and that performance is not driven by any single descriptor family: ten global physicochemical scalars recover 91% of full-feature performance. Finally, explicitly modelling label dependence yields targeted benefits for scarce activities and supports ranking which activity to assay next from partial positive evidence.

Existing class-incremental learning methods struggle in multi-label scenarios (MLCIL) due to the inherent contradiction of learning objectives arising from co-occurring and incomplete labels. We argue that the core obstacle is the model's ambiguous boundary between known and unknown knowledge, which undermines historical knowledge retention, complicates current task learning, and limits adaptability to future concepts. To address this, we propose KBK (Knowing Beyond the Known), a reinforced knowledge specification framework that explicitly models what is known or not to unify historical, current, and prospective learning. Specifically, to clarify known knowledge, we develop a hierarchical feature purification module that disentangles fine-grained class-specific features from global features, where high-level semantic abstraction is reinforced with low-level visual features. Additionally, an uncertainty-aware recall enhancement strategy suppresses unreliable predictions based on distribution priors, improving the quality of historical recall. For probing the unknown, KBK leverages semantic correlations to synthesize informative unknown features under co-occurring, preserving embedding space for future learning. Furthermore, to mitigate heterogeneous forgetting, we design a category-balanced gradient compensation loss that dynamically reweights gradient backpropagation according to forgetting speeds. Experiments on multiple benchmarks validate the effectiveness and robustness of KBK, which surpasses prior best methods by 2.7% in Avg. Acc on MS-COCO B0-C10 setting even without any replay buffers.

Automatic medical coding assigns ICD codes to clinical notes, but it remains challenging due to long documents, imbalanced label distributions, and diverse terms. These challenges are especially severe for rare codes, which have limited training instances and are easily confused with semantically similar labels. We introduce CoLa-ICD, a knowledge-enhanced framework for long-tail prediction. CoLa-ICD enriches ICD labels with external terms, models dependencies among related codes, and learns stronger alignment between label semantics and clinical evidence for long-tail prediction. Experiments show that CoLa-ICD improves long-tail prediction with larger gains in larger and sparser label spaces and achieves state-of-the-art performance in AUC, F1, and P@k. Our code is available at https://github.com/youwillbethebest/Cola-ICD.

The per-instance Jaccard score, or intersection over union (IoU), is standard in multi-label classification and binary segmentation. With $s$ labels, its loss matrix has $2^s$ outcomes and reports. Under the convention $\mathrm{Jac}(\varnothing,\varnothing)=1$, we prove that the Jaccard score, shifted-loss, and ordinary loss matrices are nonsingular and that the loss columns have affine dimension $2^s-1$. The proof combines a finite MinHash Gram representation with Boolean Möbius inversion. For exact calibration, we prove $2^{s-1} \leq \mathrm{CCdim}(L^{\mathrm{Jac}}) \leq 2^s-1$. The lower bound uses a factorially weighted distribution with $2^{s-1}+1$ supported outcomes and Bayes-optimal reports. Consequently, every exactly calibrated convex surrogate requires exponentially many prediction coordinates. We also give two polynomial-dimensional approximation guarantees with explicit regret transfers. A new $F_1$-to-Jaccard transfer turns an existing $(s^2+1)$-dimensional $F_1$ surrogate into a polynomial-time rule with asymptotic Jaccard regret at most $3-2\sqrt{2}$. For any $α>0$ and $0<ρ<1$, a MinHash square-loss surrogate attains Jaccard-regret floor $α$ uniformly over arbitrary conditional label distributions. With probability at least $1-ρ$, the direct construction has dimension $O((s^2+s\log(1/ρ))/α^2)$, while a signed variant has dimension $O((s+\log(1/ρ))/α^2)$. Thus zero-regret calibration requires exponential dimension, whereas every fixed additive regret tolerance admits polynomial prediction dimension.

This paper addresses the challenge of multi-label defect classification in electroluminescence (EL) images of photovoltaic (PV) cells. Training models on images where multiple defects co-occur creates learning ambiguity, making it difficult to disentangle visual features for specific defect types, a problem compounded by the scarcity of examples for individual classes. To tackle this, we introduce Generative Defect Isolation (GDI), utilizing the LaMa inpainting model with Fast Fourier Convolutions to remove selected defects and generate realistic, single-defect training samples. Extensive experiments on Vision Transformer (ViT-S, ViT-L) and EfficientNetV2-L architectures demonstrate that GDI significantly outperforms baselines. The performance gains are most pronounced in low-data scenarios; class-wise analysis shows substantial improvements, boosting the F1-Score for rare defect classes by up to 63.6%. Furthermore, GDI effectively resolves learning ambiguity from co-occurring defects, yielding a 26% reduction in such co-occurring classification errors. Our work establishes GDI as an effective method for maximizing the value of existing segmentation datasets and sets a new performance benchmark for multi-label classification in this domain.

Thoracic pathologies rarely occur in isolation, yet standard multi-label classifiers rely on shared global descriptors, discarding \emph{where} findings lie and \emph{how} they co-occur. We propose \textbf{C$\mathbf{^2}$A} (Co-occurrence Aware Class Attention), a classification head that explicitly couples spatial evidence with clinical priors. First, C$^2$A casts pooling as an expectation over learned per-class spatial attention maps, yielding localized descriptors for each disease. Second, it couples these descriptors via a learnable graph warm-started from empirical label co-occurrence. A single residual message-passing step shares evidence among related findings, proving to be a bounded perturbation of the identity where co-occurrence enters each logit through an explicit bilinear interaction. On CheXpert, C$^2$A achieves a superior $0.895$ macro-mean AUROC, outperforming advanced context-gating baselines. Crucially, gains concentrate on highly co-occurrent classes with ambiguous spatial evidence (rescuing Atelectasis by $+1.5$ over GCG), demonstrating the prior's regularizing effect with a negligible overhead of one linear projection and a $C\!\times\!C$ edge matrix.

Lung cancer remains one of the leading causes of cancer- related mortality worldwide. Although targeted therapies have improved outcomes for patients with non-small cell lung cancer (NSCLC), they rely on mutation profiling through tissue biopsy, an invasive procedure with several limitations. This study investigates PET/CT-based radio- genomic prediction of epidermal growth factor receptor (EGFR), tumour protein 53 (TP53), and Kirsten rat sarcoma viral oncogene (KRAS) mutations using deep learning. We further evaluate whether pairwise multi-label learning improves mutation prediction compared with conventional single-gene classification. To the best of our knowledge, this is among the first studies to systematically investigate multi-label learning for PET/CT radiogenomic mutation prediction in NSCLC. Experiments were conducted on a novel UK-based radiogenomics cohort. Joint pre- diction of KRAS and TP53 improved AUC from 0.58 to 0.64 for KRAS and from 0.69 to 0.71 for TP53. For the EGFR/KRAS pair, only EGFR benefited from joint learning, while no improvement was observed for the EGFR/TP53 pair. These findings demonstrate that the effectiveness of multi-label learning depends on the specific combination of gene mutations being modelled, suggesting that mutation-specific modelling strategies may be preferable for PET/CT radiogenomic prediction.

The instance-wise $F_1$ measure is a central performance measure for multi-label classification. For a problem with $s$ labels, it defines a $2^s\times 2^s$ loss matrix. Previous work exhibited $s^2+1$-coordinate affine and shifted low-rank representations and used them to construct quadratic-dimensional convex calibrated surrogates. We determine the exact rank. Under the convention $F_1(\varnothing,\varnothing)=1$, the $F_1$ score matrix, the shifted loss matrix, and the unshifted loss matrix all have rank $s^2-s+2$, while the column-affine dimension of the loss is $s^2-s+1$. The proof factors the nonempty score matrix through subset-incidence matrices and a positive-definite Cauchy matrix. Exact rank does not, by itself, lower-bound the dimension of an arbitrary convex calibrated surrogate. We therefore analyze the Bayes geometry of $F_1$ directly. We construct a distribution for which precisely all supersets of a fixed core label set are Bayes optimal, and show that the corresponding active loss columns, restricted to the witness support, have affine dimension $hn$, where $n=s-\lfloor s/3\rfloor$ and $h=\lceil(s\lfloor s/3\rfloor)^{1/2}\rceil-1$. Applying the feasible-subspace lower bound for convex calibration dimension gives $$\operatorname{CCdim}(L^{F_1}) \ge \left(\frac{2}{3\sqrt{3}}-o(1)\right)s^2.$$ Together with the quadratic upper bound, this establishes $\operatorname{CCdim}(L^{F_1})=Θ(s^2)$.

Benchmarking deep learning (DL) models for multi-label classification (MLC) of remote sensing images (RSI) typically yields rankings that do not generalize beyond the evaluated datasets. In this work, we move beyond rankings by employing functional analysis of variance (fANOVA) to systematically quantify the contributions of individual design choices and their interactions to performance variability. We conduct two empirical analyses covering 48 and 20 DL models, respectively, spanning design choices such as network architecture, fine-tuning strategy, learning strategy, and initialization. By applying fANOVA across seven MLC RSI datasets, we construct dataset meta-representations that capture design-choice sensitivity profiles. Hierarchical clustering of these meta-representations reveals that datasets naturally group according to how they respond to design decisions, with patterns strongly linked to intrinsic dataset properties such as scale, spatial resolution, and label space complexity. Our findings show that for large-scale datasets, fine-tuning strategy and architecture are dominant factors, while in data-limited regimes, initialization becomes decisive. For intermediate regimes, the interaction between architecture and learning strategy governs performance.

The Mpox outbreak remains a serious public health issue, with the WHO (World Health Organization) reporting increasing cases in some regions. Research on Mpox is vital for several reasons, including vaccine development, diagnostic improvement, viral evolution studies, and preventing future outbreaks. However, the large amount of research being published makes it difficult to organize and analyze information efficiently. This study focuses on using multilabel classification to categorize 14590 Mpox research articles into key topics such as outbreaks, vaccination, and epidemiology. Among the different AI models tested, BERT performed the best, achieving 97.05% accuracy, 97.67% micro F1 score, and 96.46% macro F1 score. To better understand how the model makes decisions, SHAP was used to analyze significant word features and patterns. The results show that BERT can help automate the classification of Mpox research, making it easier for researchers, policymakers, and healthcare workers to quickly find relevant information, saving time and improving public health efforts.

Medical coding is the task of assigning a set of diagnosis and procedure codes for a hospitalization using recorded notes. It requires aggregating information from different parts of the text and focus to different sections for each individual code, making it a very difficult problem even for professional human coders. We model the task as a multi-label text classification problem. To overcome the mentioned difficulties, we propose a deep neural model consisting of a multi-layer temporal convolution network (TCN) followed by label-wise attention. While multi-layer TCN helps extract a global document representation with the ability to learn relations over very long sequences, label-specific attention mechanism allows the model to focus on different aspects of the same document for each individual label. Our method achieves significantly better F-1 scores (9% increase) compared to the previous state-of-the-art model, with a remarkable increase in recall score (28% increase), which we believe is the more important metric for a clinical decision support setting.

Training deep learning models with freely available web images can reduce their dependence on costly manual annotations. Although webly supervised learning has been widely studied for single-label recognition, its multi-label counterpart remains underexplored, partly due to the lack of unified benchmarks and fair comparison protocols. To address this gap, we construct a benchmark for webly supervised multi-label recognition (WS-MLR), including Web-COCO and Web-Pascal, and re-implement representative baselines under a unified setting. The two datasets cover the same 80 and 20 categories as MS-COCO and Pascal VOC, respectively, and contain about 300 thousand images retrieved from the Internet using category-word combinations as search keywords. We further propose a Dual-Branch Multi-Label Contrastive Learning (DBMLCL) framework, which learns category-specific instance-level and category-level representations together with their similarities to identify and correct noisy labels. Extensive experiments on the benchmark demonstrate that DBMLCL achieves superior performance compared to representative baselines.

We propose and evaluate three hierarchical ensemble setups for zebrafish phenotype classification from embryo images. In all setups, stage 1 uses a single four-class classifier to assign images to one of the exclusive phenotypes: Normal, Chorion, Dead, or Other. Images classified as Other are then processed in stage 2, where the ensemble design differs across setups: a single multi-label classifier, two specialized multi-label classifiers, or an ensemble of binary classifiers. We compare these setups using three backbone architectures: ResNet18, ViT, and ConvNeXt. Overall, ConvNeXt achieves the best performance across setups, while the specialized hierarchical ensemble in setup 2 provides the best balance in terms of F1-score. The results show that the proposed specialised hierarchical ensembles are effective for zebrafish phenotype recognition, and suggest that ConvNeXt is particularly useful backbone model.

3D CT vision-language models (VLMs) classify abnormalities from text prompts in a zero-shot manner, enabling cross-institution deployment where labels are scarce and clinical tasks shift faster than supervised models can be retrained. A real CT scan, however, typically contains several co-occurring abnormalities, and the reliability of zero-shot multi-label prediction under distribution shift remains poorly understood. Test-time adaptation (TTA) updates a model on unlabeled target scans without source data or target annotations, yet existing TTA methods target multi-class softmax prediction on natural images or 2D medical segmentation, and none addresses unsupervised multi-label adaptation for zero-shot 3D CT VLMs. We study when TTA helps zero-shot 3D CT VLMs. A controlled diagnostic analysis shows that TTA is conditional: the volumetric input must preserve the encoder's depth structure, and the base representation must transfer to the target cohort, with depth reduction alone lowering internal AUROC by more than 0.12. We then focus on the regime where the base model already separates present from absent abnormalities. We introduce CARVE (Cardinality-Aware Retained-View Entropy), the first TTA method for this setting. CARVE estimates a sample-specific positive-label cardinality $\hat{k}$, optimizes a top-$\hat{k}$ objective to preserve co-occurring abnormalities, and performs memory-efficient multi-view adaptation by scoring weak 3D views without gradients before updating on a retained subset. Across contrastive CT-CLIP and anatomy-aware fVLM, CARVE provides the most consistent improvements across multi-label, three-class, and binary CT tasks when the base model is already discriminative. These results establish multi-label TTA for zero-shot 3D CT VLMs as a distinct problem and CARVE as a cardinality-aware solution.

With a large controlled vocabulary as the label set, the task of automated subject indexing in a library can be understood as a multi-label classification task. If the set of subject terms is large, the problem fits the Extreme Multi-Label Classification (XMLC) objective. In this study, we apply a selection of specialised supervised XMLC methods to the test case of subject indexing contemporary German scientific literature, collected at the German National Library (DNB). We contrast these results by including a classical lexical matching baseline and three of our own recently developed LLM-based methods into the benchmark. Algorithms are evaluated and compared in several metrics. This includes binary relevance comparisons with previously indexed material, as well as graded relevance ratings by professional subject librarians. A challenge for all methods is to reliably make suggestions from the long tail of the subject vocabulary. We find that supervised XMLC algorithms relying on transformer-based dense features give best results in terms of overall binary relevance metrics. However, focusing on graded relevance and performance in the long tail of our subject vocabulary, the LLM-based generative methods give better results, making them a promising alternative for future productive use.

Long-tailed label distributions reduce the reliability of deep learning for electrocardiogram (ECG) arrhythmia diagnosis, particularly for clinically important but rare abnormalities. Existing rebalancing and logit adjustment methods mainly address class frequency while overlooking direction-dependent morphological variability across ECG classes. This study proposes Angular Gaussian Supervised Contrastive Learning (AG-SCL) for long-tailed multi-label ECG diagnosis. AG-SCL integrates three components into a unified framework: an Angular Gaussian contrastive branch that models full-covariance class uncertainty on unit-normalized embeddings, Adaptive Logit Adjustment that learns bounded label-state-specific prior corrections instead of fixed frequency-based margins, and tail-aware augmentation that generates morphology-preserving views while protecting the 7-25 Hz QRS-dominant band. The method was evaluated on the public PTB-XL benchmark and a nocturnal ECG dataset comprising 1317 hours of recordings from 141 subjects. AG-SCL achieved the best macro-level performance on both datasets. On PTB-XL, it obtained a balanced accuracy of 0.838, sensitivity of 0.709, specificity of 0.968, mean average precision of 0.495, and TPR at 5% FPR of 0.778. On Noc-ECG, the corresponding values were 0.918, 0.889, 0.947, 0.488, and 0.900. The largest gains occurred in rare or morphologically unstable rhythm classes, while ablation studies confirmed the contributions of full-covariance modelling, Adaptive Logit Adjustment, and tail-aware augmentation. AG-SCL improves long-tailed ECG diagnosis by combining prior calibration with anisotropic representation learning, enhancing sensitivity to rare arrhythmias while maintaining clinically relevant specificity. Our code is available at: https://github.com/Open-EXG/AG-SCL-for-Long-Tailed-ECG.

This paper describes DS@GT ARC's third-place solution to the PlantCLEF 2026 challenge on multi-species plant identification in vegetation quadrat images, where systems must predict every species present in high-resolution (~3000 x 3000 pixel) plot photographs while training only on single-label images of individual plants. The pipeline is built around a fine-tuned DINOv2 ViT-L/14 classifier applied over a multi-scale tile decomposition of each quadrat, with per-tile predictions blended with a FAISS kNN retriever and post-processed by source-aware temporal fusion across repeated plot visits, a habitat-fit demotion that injects geographic and altitude priors from the training data, and a South-Western Europe geographic mask. Habitat-fit demotion and multi-scale aggregation are the largest individual contributors in the ablations. Two complementary training-centric directions, a cross-region transformer with noisy-student distillation on the LUCAS dataset and a label-as-query transformer decoder over synthetic CLS-domain pseudo-quadrats, yielded null results. An inference-time augmentation with instance-aware segmentation crops also did not improve performance. The selected submission reaches a private-leaderboard macro-F1 of 0.43902 (third place; public 0.51096); an unselected configuration of the same pipeline scored above 0.45 on the private set. Code: https://github.com/dsgt-arc/plantclef-2026.