Temporal KGs
KG: Knowledge Graph
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7 papers in the last four weeks, against 2 the four weeks before. 0.1% of all new papers.
Latest papers 48
Long-term memory is the missing layer for LLM agents: across sessions they forget, and the common workaround -- replaying the whole history into the prompt -- is expensive, slow, and, as distractors accumulate, less accurate. Most memory systems win on cost or latency but still lose to the full-context baseline on accuracy, and benchmark numbers are reported on inconsistent, non-reproducible harnesses, so one system appears at wildly different scores across sources. We present Engram, an open-source, dual-process memory engine on a bi-temporal data model. A fast write path appends lossless episodes with no LLM on the critical path; an asynchronous path extracts atomic (subject, predicate, object) facts, builds a bi-temporal knowledge graph, and resolves contradictions without an LLM call per fact -- invalidating, never deleting, so every fact keeps provenance and a supersession chain. A hybrid read path fuses dense, lexical, graph, and recency/salience signals, applies a point-in-time ("as-of") filter, and assembles a compact, provenance-tagged context. On the full 500-question LongMemEval_S, graded by the official category-specific judge, Engram's lean configuration -- answering from a ~9.6k-token retrieved slice, never the full history -- scores 83.6% vs. 73.2% for full-context (+10.4 points, McNemar p < 10^-6) at ~8x fewer tokens (9.6k vs. 79k), with 0/500 errored. The gain needs a hybrid read path: facts alone lose recall, while facts plus retrieved chunks recover detail. We also contribute a neutral, in-repo evaluation harness with the official judge baked in and the full-context baseline in every table, publish the raw per-question logs, and document the measurement-integrity pitfalls (truncation, home-grown judges, full-history leaks) that silently distort memory benchmarks. Every number ships with a command to reproduce it.
TokenMizer: Graph-Structured Session Memory for Long-Horizon LLM Context Management
Long-horizon LLM sessions outlive their context windows, and the standard mitigations - truncation, summarization, retrieval - share a structural flaw: they treat history as flat text, discarding precisely the content that makes a session resumable: decisions and their rationales, task status, and file modification history. We present TokenMizer, an open-source transparent proxy that maintains session history as a typed knowledge graph and, at context boundaries, replaces the raw transcript with a token-budgeted serialization of session state. The schema comprises 14 node types and 7 edge types under an 8-state lifecycle in which decisions can be superseded or explicitly invalidated; bitemporal validity intervals support time-travel queries; and first-class decision-transition records preserve why each decision replaced its predecessor (trigger, reason, evidence). Version 0.3.1 embeds this memory core in a production-shaped serving layer - SSE streaming, security middleware, nine provider adapters, a monitoring dashboard, graph exports (D3 JSON, self-contained interactive HTML, Obsidian Canvas) - and exposes checkpoint/resume to agents as Model Context Protocol tools. The evaluation is deliberately minimal and fully provenanced: three synthetic sessions, heuristic-only extraction, one plain-summary baseline, every value traceable to a single versioned results file. Graph extraction ties the baseline on task recall (75.6%) and exceeds it on decision recall (85.0% vs. 70.0%) and file recall (100% vs. 91.7%), with 201-302-token resume blocks extracted in 8.1-529.9 ms per session. At n=3 these results are directional; ceiling effects and baseline weaknesses are analyzed explicitly. Code, benchmark runner, and the exact results file are released under the MIT licence.
IA-RAG: Interval-Algebra-Driven Temporal Reasoning for Dynamic Knowledge Retrieval
Retrieval-Augmented Generation (RAG) has shown strong effectiveness in grounding Large Language Models (LLMs) with external knowledge. However, existing RAG and Graph RAG frameworks largely treat knowledge as static or associate time with coarse-grained timestamps or metadata, failing to capture rich temporal structures such as duration, overlap, and containment. We propose IA-RAG, a hierarchical temporal RAG framework that models knowledge as time intervals and performs retrieval under formal temporal constraints. IA-RAG represents facts as Interval Event Units (IEUs) and organizes them into a hierarchical Thematic Forest, where temporal dependencies are governed by Allen's Interval Algebra. To handle incomplete or uncertain temporal boundaries, IA-RAG further introduces a Sub-graph Time Tightening mechanism that refines fuzzy intervals through logical constraints within connected event subgraphs. In addition, IA-RAG supports implicit temporal semantic retrieval through interval-algebra-guided traversal. Experiments on multiple temporal question answering benchmarks, including TimeQA, TempReason, and ComplexTR, demonstrate that IA-RAG achieves strong temporal retrieval and reasoning performance, particularly on complex compositional temporal reasoning tasks. Our code is released at https://github.com/xiaoAugenstern/LogicalRAG_TemporalQA.
HoT-SSM:Higher-order Temporal Knowledge Graph Reasoning with State Space Models for Health Care
Medical knowledge graphs (MKGs) infused with clinical knowledge have been increasingly used to model electronic health records (EHRs) to support interpretable predictions in healthcare domain. However, existing MKG-based approaches are limited in capturing pairwise relations between clinical concepts (e.g., conditions, procedures, and medications), and restricts their ability to model higher-order interactions among co-occurring or semantically related concepts. In addition, most representation learning methods that leverage MKGs either collapse temporal information across visits or lack an explicit mechanism for modeling long-range temporal dependencies, which is critical for clinical tasks such as mortality prediction. To mitigate these limitations, we propose HoT-SSM, a parameter efficient and higher-order temporal graph reasoning with state space models. For each visit, HoT-SSM constructs hypergraphs by grouping semantically related clinical concepts into hyperedges using domain knowledge, thereby preserving visit-level clinical context. Further, to model the temporal dynamics while learning the representations, we introduce a novel dynamic hypergraph-based state space model that explicitly captures patients latent state evolution over time while preserving long-range information. The learned representations are used for downstream clinical prediction and reasoning. Experiments on MIMIC-III and MIMIC-IV datasets shows significant performance improvement over the current state-of-the-art models, demonstrating the effectiveness of jointly modeling higher-order clinical interactions and long-range temporal dependencies.
CHRONOS: Temporally-Aware Multi-Agent Coordination for Evolving Data Marketplaces
Temporal knowledge-graph data marketplaces face three coupled failures in static designs: stale hybrid index shortcuts reduce recall as edges evolve, stationary Shapley pricing misattributes value after distribution shifts, and uncoordinated agents over-consume a shared differential-privacy budget. We present CHRONOS, a three-layer architecture providing a unified treatment of these challenges with explicit public and private separation. Layer one applies neural-ODE temporal decay to shortcut edges, providing a per-query expected recall-loss bound of Big-O of Pq lambda delta t, with a monotone-envelope guarantee reducing bound looseness to 1.8 to 3.2 times observed loss. Layer two conditions Shapley valuation on detected changepoints and provides finite-sample error guarantees under noise. Layer three uses EXP3-IX to achieve Big-O of the square root of T log T regret while enforcing epsilon and delta differential privacy via moments accounting. CHRONOS releases a privatized affinity matrix per epoch using the Gaussian mechanism; all retrieval and ranking are post-processing, incurring no extra privacy cost. We provide multi-epoch settlement, scalability analysis for 500 sellers, and comparisons against accelerated baselines. Across four benchmarks, CHRONOS shows 0.937 recall at ten, 2.74 queries per second, 161 ms latency, and total epsilon of 4.25 at delta of 10 to the power of negative 6 under zCDP composition. These results indicate a competitive operating point. A limitation is that at this privacy level, released valuations remain noise-dominated; utility derives primarily from public index routing and adaptive scheduling driven by low-sensitivity statistics.
ChronoMedKG: A Temporally-Grounded Biomedical Knowledge Graph and Benchmark for Clinical Reasoning
Biomedical knowledge graphs (KGs) treat disease associations as static facts, but temporal information is crucial for clinical reasoning, e.g., a symptom diagnostic of one disease at age 3 may imply a different disease at age 13. Existing KGs such as PrimeKG, Hetionet, and iKraph do not encode when a finding becomes clinically relevant over the course of a disease. This limits their usefulness for longitudinal clinical reasoning and retrieval augmentation. We introduce ChronoMedKG, a temporal biomedical knowledge graph that contains 460,497 evidence-linked triples (filtered from 13M raw extractions) covering 13,431 diseases. Each association is tied to temporal components like onset window or progression stage, which are backed by PMID-traceable evidence and a multi-signal credibility score. The graph is constructed through a disease-autonomous multi-agent pipeline in which multiple frontier LLMs independently extract knowledge from PubMed and PMC literature. Only those relations are kept that are supported by multi-model consensus, survive credibility filtering, as well as ontology alignment. ChronoMedKG scored 92.7% agreement against Orphadata and adds temporal grounding for 6,250 diseases absent from HPOA, Orphadata, and Phenopackets, including 1,657 Orphanet-coded rare diseases. We further introduce ChronoTQA, a benchmark of 3,341 questions across eight task types (six temporal plus two static controls), with a 12-question supplementary probe. Frontier LLMs lose roughly 30 points moving from static to temporal questions; ChronoMedKG retrieval rescues 47-65% of their long-tail failures, against 17-29% for HPOA-RAG. As such, ChronoMedKG provides a crucial temporal axis for retrieval-augmented clinical systems that was previously absent.
Short-Term-to-Long-Term Memory Transfer for Knowledge Graphs under Partial Observability
Reinforcement learning under partial observability requires deciding what information to retain, yet most memory-based approaches do not explicitly model short-term-to-long-term transfer of symbolic observations. We study this transfer process in a temporal knowledge-graph memory setting and cast it as a neuro-symbolic value-based decision problem: for each observed triple, the agent chooses whether to keep or drop it before long-term insertion. To handle variable-sized short-term buffers, we use a per-item Q-learning design with shared parameters and a practical temporal-difference update over matched items across consecutive steps. On the RoomKG benchmark at long-term memory capacity 128, learned transfer decisions outperform symbolic and neural baselines, including symbolic baselines with temporal annotations and history-based LSTM/Transformer baselines. Across transfer-policy ablations, a lightweight local short-term-only variant performs best, and step-level behavior shows that the policy keeps navigation- and query-relevant facts while discarding lower-value candidate facts, supporting explicit and interpretable memory decisions under memory constraints.
Historical Knowledge Graphs for Global Maritime Estimated Time of Arrival
Accurate vessel estimated-time-of-arrival forecasts are critical for port operations and decarbonization, yet global-scale travel-time prediction remains difficult without costly contextual data. Herein, I present a methodology for constructing a historical maritime knowledge graph using only Automatic Identification System (AIS) data. First, segmented trajectories are extracted from noisy AIS data using a Gaussian-mixture-model-based preprocessing pipeline. The graph is then constructed by iteratively processing the trajectories and storing speed distributions stratified by vessel type, time of travel, and direction of travel; the resulting global graph comprises 5,433 geohash-3 nodes and 12,334 edges. The graph can be queried to retrieve travel-time predictions between any two location via a hierarchical, priority-based system that uses historical statistics with principled fallback. On a temporally held-out test set, median RMSE is 22.75 min (segment-level) and 30.90 min (trajectory-level), with 69.1% of trajectories within 20% of actual arrival time. On a second external test set, median RMSE is 27.36 min (segment-level) and 37.46 min (trajectory-level), with 62.1% of trajectories within 20%. These results corroborate the promise of our method, enabling global travel-time prediction and providing a strong foundation for just-in-time arrival planning and emissions reduction.
Ontology for Policing: Conceptual Knowledge Learning for Semantic Understanding and Reasoning in Law Enforcement Reports
Law enforcement reports contain structured fields and written narratives. However, many incident facts that are needed for review, police training, and investigations are in natural language and require manual reading. We propose a framework using symbolic methods for converting narratives into evidence-linked facts. Our objective is to measure the value of narratives to recover incident details only from the unstructured text and build temporal graphs with time cues and domain axioms. We achieve this by redacting personal identifiers, semantic parsing, predicate mapping to ontology, and reasoning. We evaluate the symbolic approach on 450 property crime reports and a short human review. Of the extracted events from the system, 54.1% had a confidence score of at least 0.80 and 93.7% were mapped through the PropBank--VerbNet--WordNet semantic path. 100% agreement was reached on incident initiation, stolen items, and temporal cues and lower agreement for forced entry interpretation.
Deterministic Event-Graph Substrates as World Models for Counterfactual Reasoning
We study event-graph substrates: a class of world models that represent agent state as an append-only log of typed RDF triples and answer counterfactual queries by forking the log under a structured intervention vocabulary. Substrates are inspectable at the triple level, support exact counterfactuals, and transfer across domains without learned components. We formalize the class, prove a duality between explanatory and counterfactual queries that reduces both to the same causal-ancestor traversal, and evaluate a 1,400-line CLEVRER-DSL interpreter atop a domain-agnostic substrate runtime at full CLEVRER validation scale (n=75,618). The substrate exceeds the NS-DR symbolic oracle on all four per-question categories (by 9.89, 20.26, 17.65, and 0.80 percentage points), and exceeds the parametric ALOE baseline on descriptive and explanatory while lagging on predictive and counterfactual. We also introduce twin-EventLog, a 500-specification Park-canonical Smallville counterfactual benchmark on which the substrate exceeds Llama-3.1-8B with full context by 18.80 points joint accuracy.
Strikingness-Aware Evaluation for Temporal Knowledge Graph Reasoning
Temporal Knowledge Graph Reasoning (TKGR) aims at inferring missing (especially future) events from historical data. Current evaluation in TKGR uniformly weights all events, ignoring that most are trivial repetitions, which overestimate the true reasoning ability. Therefore, the rare outstanding events, whose prediction demands deeper reasoning, should be distinguished and emphasized. To this end, we propose a strikingness-aware evaluation framework, which introduces a rule-based strikingness measuring framework (RSMF) to quantify event strikingness by comparing its expected occurrence with peer events derived from temporal rules. Strikingness is then integrated as a weighting factor into metrics like weighted MRR and Hits@k. Experiments on four TKG benchmarks reveal: 1) All representative models perform worse as event strikingness increases, 2) Path-based methods excel on low-strikingness events and representation-based ones on high-strikingness events, 3) We design an ensemble method whose gains stem from fitting trivial events rather than reasoning improvement. Our framework provides a more rigorous evaluation, refocusing the field on predicting outstanding events.
PrimeKG-CL: A Continual Graph Learning Benchmark on Evolving Biomedical Knowledge Graphs
Biomedical knowledge graphs underwrite drug repurposing and clinical decision support, yet the upstream ontologies they depend on update on independent cycles that add millions of edges and deprecate hundreds of thousands more between releases. Yet existing continual graph learning has been studied almost exclusively on synthetic random splits of static, generic KGs, a regime that cannot reproduce the asynchronous, structured evolution real biomedical KGs undergo. To this end, we introduce PrimeKG-CL, a CGL benchmark built from nine authoritative biomedical databases (129K+ nodes, 8.1M+ edges, 10 node types, 30 relation types) with two genuine temporal snapshots (June 2021, July 2023; 5.83M edges added, 889K removed, 7.21M persistent), 10 entity-type-grouped tasks, multimodal node features, and a per-task persistent/added/removed test stratification. On three tasks (biomedical relationship prediction, entity classification, KGQA), we evaluate six CL strategies across four KGE decoders, plus LKGE, an LLM-RAG agent, and CMKL. We find that decoder choice and continual learning strategy interact strongly: no single strategy performs best across all decoders, and mismatched combinations can significantly degrade performance. Moreover, only DistMult exhibits a clear separation between persistent and deprecated knowledge, indicating that standard metrics conflate retention of still-valid facts with failure to forget outdated ones; this effect is absent under RotatE. In addition, multimodal features improve entity-level tasks by up to 60%, and a recent CKGE framework (IncDE) failed to scale to our 5.67M-triple base task across five attempts up to 350GB RAM. Data, pipeline, baselines, and the stratified split are released openly. Dataset:huggingface.co/datasets/yradwan147/PrimeKGCL|Code:github.com/yradwan147/primekg-cl-neurips2026
AdaTKG: Adaptive Memory for Temporal Knowledge Graph Reasoning
Temporal knowledge graphs (TKGs) represent time-stamped relational facts and support a wide range of reasoning tasks over evolving events. However, existing methods produce entity representations that are static at the entity level, in that each representation is a function of learned parameters only and retains no trace of the interactions in which the entity has participated. In this paper, we depart from this static view and propose that each entity be modeled as an adaptive process whose representation is refined every time the entity participates in a fact. To this end, we propose AdaTKG, which maintains a per-entity memory that is updated with every observed interaction, with the memory accumulating online and predictions improving as more interactions arrive. Specifically, we instantiate the memory update as a learnable exponential moving average governed by a single shared scalar instead of using learnable parameters for each entity, enabling AdaTKG to handle entities unseen during training. Extensive experiments confirm consistent gains over TKG baselines, demonstrating the effectiveness of adaptive memory. Code is available at: https://github.com/seunghan96/AdaTKG
CHE-TKG: Collaborative Historical Evidence and Evolutionary Dynamics Learning for Temporal Knowledge Graph Reasoning
Temporal knowledge graph (TKG) reasoning aims to predict future events from historical facts. A key challenge lies in jointly capturing two sources of predictive information in TKGs: historical evidence and evolutionary dynamics. However, existing methods typically focus on only one of these sources, which limits the ability to fully exploit the complementary predictive signals in TKGs. To address this, we propose CHE-TKG, a novel collaborative dual-view learning framework for TKG reasoning. CHE-TKG explicitly separates and jointly models historical evidence and evolutionary dynamics, aiming to learn and exploit their complementary predictive signals. Specifically, CHE-TKG constructs a historical evidence graph to capture long-term structural regularities and stable relational constraints, alongside an evolutionary dynamics graph to model temporal transitions and recent changes, with dedicated encoders for each view. We further employ relation decomposition and a contrastive alignment objective to better capture the predictive signals across the two views. Extensive experiments demonstrate that CHE-TKG achieves state-of-the-art performance on multiple benchmarks.
Not All Memories Age the Same: Autodiscovery of Adaptive Decay in Knowledge Graphs
Knowledge graphs used for retrieval treat all facts as equally current. Existing temporal approaches apply uniform decay, using a single forgetting curve regardless of knowledge type. We show this is fundamentally misspecified: different knowledge types exhibit different temporal dynamics, and the core retrieval problem is not latency or throughput but identifying what is important at query time. We propose a hierarchical framework that replaces uniform decay with a continuous decay surface parameterized by two orthogonal signals: velocity (how frequently a concept is observed) and volatility (how much the value changes between observations, measured via embedding distance). The decay surface is decomposed into three learnable levels: domain-level parameters capture universal patterns (some predicates are inherently permanent, others inherently transient), context-level parameters capture setting-dependent variation, and entity-level adaptation personalizes decay to specific subjects. All parameters emerge from data through survival analysis on observed value lifetimes, requiring no predefined taxonomies or domain expertise. We formulate edge lifetime as a survival problem where the event is value supersession (a meaningfully different value replacing the current one), distinct from mere re-observation. Experiments on synthetic temporal knowledge graphs demonstrate recovery of planted hierarchical parameters (HDBSCAN ARI = 1.0). Validation on 107 Wikipedia articles and 1,163 patient records from the Synthea clinical EHR simulator shows that velocity-volatility clusters emerge naturally, align with observable persistence patterns, and near-universally exhibit the Lindy effect (Weibull shape k < 1). Uniform decay performs 18x worse than no temporal weighting. Heterogeneous decay recovers from this, with each hierarchy level contributing measurable improvement.
WorldDB: A Vector Graph-of-Worlds Memory Engine with Ontology-Aware Write-Time Reconciliation
Persistent memory is the bottleneck separating stateless chatbots from long-running agentic systems. Retrieval-augmented generation (RAG) over flat vector stores fragments facts into chunks, loses cross-session identity, and has no first-class notion of supersession or contradiction. Recent bitemporal knowledge-graph systems (Graphiti, Memento, Hydra DB) add typed edges and valid-time metadata, but the graph itself remains flat: no recursive composition, no content-addressed invariants on nodes, and edge types carry no behavior beyond a label. We present WorldDB, a memory engine built on three commitments: (i) every node is a world -- a container with its own interior subgraph, ontology scope, and composed embedding, recursive to arbitrary depth; (ii) nodes are content-addressed and immutable, so any edit produces a new hash at the node and every ancestor, giving a Merkle-style audit trail for free; (iii) edges are write-time programs -- each edge type ships on_insert/on_delete/on_query_rewrite handlers (supersession closes validity, contradicts preserves both sides, same_as stages a merge proposal), so no raw append path exists. On LongMemEval-s (500 questions, ~115k-token conversational stacks), WorldDB with Claude Opus 4.7 as answerer achieves 96.40% overall / 97.11% task-averaged accuracy, a +5.61pp improvement over the previously reported Hydra DB state-of-the-art (90.79%) and +11.20pp over Supermemory (85.20%), with perfect single-session-assistant recall and robust performance on temporal reasoning (96.24%), knowledge update (98.72%), and preference synthesis (96.67%). Ablations show that the engine's graph layer -- resolver-unified entities and typed refers_to edges -- contributes +7.0pp task-averaged independently of the underlying answerer.
The Provenance Gap in Clinical AI: Evidence-Traceable Temporal Knowledge Graphs for Rare Disease Reasoning
Frontier large language models generate clinically accurate outputs, but their citations are often fabricated. We term this the Provenance Gap. We tested five frontier LLMs across 36 clinician-validated scenarios for three rare neuromuscular disease pairs. No model produced a clinically relevant PubMed identifier without prompting. When explicitly asked to cite, the best model achieved 15.3% relevant PMIDs; the majority resolved to real publications in unrelated fields. We present HEG-TKG (Hierarchical Evidence-Grounded Temporal Knowledge Graphs), a system that grounds clinical claims in temporal knowledge graphs built from 4,512 PubMed records and curated sources with quality-tier stratification and 1,280 disease-trajectory milestones. In a controlled three-arm comparison using the same synthesis model, HEG-TKG matches baseline clinical feature coverage while achieving 100% evidence verifiability with 203 inline citations. Guideline-RAG, given overlapping source documents as raw text, produces zero verifiable citations. LLM judges cannot distinguish fabricated from verified citations without PubMed audit data. Independent clinician evaluation confirms the verifiability advantage (Cohen's d = 1.81, p < 0.001) with no degradation on safety or completeness. A counterfactual experiment shows 80% resistance to injected clinical errors with 100% detectability via citation trace. The system deploys on-premise via open-source models so patient data never leaves institutional infrastructure.
OntoTKGE: Ontology-Enhanced Temporal Knowledge Graph Extrapolation
Temporal knowledge graph (TKG) extrapolation is an important task that aims to predict future facts through historical interaction information within KG snapshots. A key challenge for most existing TKG extrapolation models is handling entities with sparse historical interaction. The ontological knowledge is beneficial for alleviating this sparsity issue by enabling these entities to inherit behavioral patterns from other entities with the same concept, which is ignored by previous studies. In this paper, we propose a novel encoder-decoder framework OntoTKGE that leverages the ontological knowledge from the ontology-view KG (i.e., a KG modeling hierarchical relations among abstract concepts as well as the connections between concepts and entities) to guide the TKG extrapolation model's learning process through the effective integration of the ontological and temporal knowledge, thereby enhancing entity embeddings. OntoTKGE is flexible enough to adapt to many TKG extrapolation models. Extensive experiments on five data sets demonstrate that OntoTKGE not only significantly improves the performance of many TKG extrapolation models but also surpasses many state-of-the-art(SOTA) baseline methods.