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Latest in Tabular Data

May 13, 2026cs.LG

VIP-COP: Context Optimization for Tabular Foundation Models

Tabular foundation models (TFMs) have emerged as a powerful paradigm for in-context learning on structured data, enabling direct prediction on new tabular tasks without task-specific training. However, their effectiveness is constrained by context length limits, restricting application to medium-scale data and degrading performance when inference-time data exceed pretraining size distributions. Our work introduces VIP-COP, estimating the Value of Importance for Prediction of training examples and features for hard Context OPtimization for TFMs. Its explicit selection mechanism suppresses noise and isolates influential data, enabling the model to also benefit from data augmentation by prioritizing high-value augmented samples and features. VIP-COP is (i) fast, boosting performance often within minutes of optimization, based on an online KernelSHAP-based regression with iterative refinement, value-guided context sampling, and multi-fidelity pruning; (ii) budget-aware and any-time, improving with additional test-time compute unlike heuristics that produce fixed contexts; (iii) model-aware yet fully black-box, requiring no access to model internals, making it compatible with both proprietary and open-source TFMs; (iv) interpretable, identifying discrete ``Very Important Predictors'' (samples and features) that maximize signal-to-noise, which makes it (v) robust, isolating high-value data from noise. In contrast, soft-prompt optimization requires model gradients, produces abstract latent tokens, and lacks explicit signal discrimination. Extensive experiments show that VIP-COP consistently outperforms heuristic and optimized baselines across large-scale high-dimensional testbeds, including data augmentation and data-noise settings, establishing a new state of the art in test-time context refinement for TFMs.
Yilong Chen, Xueying Ding, Leman Akoglu
May 13, 2026cs.LG

Multitask Multimodal Fusion with Tabular Foundation Models for Peak and Durability Prediction of Pertussis Booster Response

Pertussis booster vaccination produces immune responses that vary widely across individuals in both peak magnitude and long-term durability. These two phases are governed by partly distinct biological compartments:peak reflects acute B-cell activation and antibody secretion, while durability reflects the establishment of long-term humoral memory. Yet most computational models target only one, missing the full boost-and-wane trajectory. Jointly predicting both is non-trivial because the two endpoints are biologically dissociated rather than redundant; samples are small, modalities are heterogeneous with structured missingness, and the two tasks rely on different measurement windows. We propose a multi-task contrastive multimodal fusion architecture combining frozen TabPFN-v2 per-modality encoders, a dual-label supervised contrastive loss that treats two subjects as a positive pair if they agree on the Task 1 label or the Task 2 label, modality dropout calibrated to empirical missingness, and missingness-masked attention fusion. Applied to a curated subset of the CMI-PB pertussis booster dataset (n = 158 subjects, four modalities, 44.9% with at least one modality missing; Spearman r = -0.58 between peak and durability, n = 96), the model achieves test AUROC 0.797 (95% CI [0.621, 0.948]) for peak response and 0.755 (95% CI [0.519, 0.945]) for durability, with both significant under joint label permutation (N = 1000; p = 0.002 and p = 0.045). Across logistic regression, XGBoost, and MLP baselines on raw features and on TabPFN embeddings, the proposed model is the only one whose 95% CIs lie above chance on both tasks simultaneously. Per-modality contribution analyses recover task-specific modality contributions consistent with the underlying immunology: peak prediction is carried by cytokine signatures, while durability is carried by baseline antibody features.
Divya Sitani
May 12, 2026cs.CV

Just Ask for a Table: A Thirty-Token User Prompt Defeats Sponsored Recommendations in Twelve LLMs

Wu et al. (2026) showed that most frontier large language models (LLMs) recommend a sponsored, roughly twice-as-expensive flight when their system prompt contains a soft sponsorship cue. We reproduce their evaluation on ten open-weight chat models plus the two of their twenty-three models that are still reachable today (gpt-3.5-turbo, gpt-4o). All reported rates in this paper are produced under the same judge the original paper used (gpt-4o); we additionally store every label under an open-weight (gpt-oss-120b) and a smaller proprietary (gpt-4o-mini) judge for an ablation. Three findings emerge. First, a prose description of an LLM evaluation pipeline is not, on its own, sufficient for accurate reproduction: we surfaced three silent implementation failures that each shifted a reported rate by tens of percentage points. Second, the central claims do generalise - the gpt-3.5-turbo logistic-regression intercept of alpha = 0.81 is within four points of the original alpha = 0.86, and 200 of 200 trials on gpt-3.5-turbo and gpt-4o promote a payday lender to a financially distressed user. Third, a thirty-token user prompt that asks the assistant for a neutral comparison table first cuts sponsored recommendation from 46.9% to 1.0% averaged across our ten open-source models, and from 53.0% to 0% averaged across the two OpenAI models. AI literacy and price-comparison portals are likely market-level mitigations; the harmful-product cell is bounded by neither. Raw data, labels and analysis scripts are at https://github.com/akmaier/Paper-LLM-Ads .
Andreas Maier, Jeta Sopa, Gozde Gul Sahin +2
May 12, 2026cs.LG

STRABLE: Benchmarking Tabular Machine Learning with Strings

Benchmarking tabular learning has revealed the benefit of dedicated architectures, pushing the state of the art. But real-world tables often contain string entries, beyond numbers, and these settings have been understudied due to a lack of a solid benchmarking suite. They lead to new research questions: Are dedicated learners needed, with end-to-end modeling of strings and numbers? Or does it suffice to encode strings as numbers, as with a categorical encoding? And if so, do the resulting tables resemble numerical tabular data, calling for the same learners? To enable these studies, we contribute STRABLE, a benchmarking corpus of 108 tables, all real-world learning problems with strings and numbers across diverse application fields. We run the first large-scale empirical study of tabular learning with strings, evaluating 445 pipelines. These pipelines span end-to-end architectures and modular pipelines, where strings are first encoded, then post-processed, and finally passed to a tabular learner. We find that, because most tables in the wild are categorical-dominant, advanced tabular learners paired with simple string embeddings achieve good predictions at low computational cost. On free-text-dominant tables, large LLM encoders become competitive. Their performance also appears sensitive to post-processing, with differences across LLM families. Finally, we show that STRABLE is a good set of tables to study "string tabular" learning as it leads to generalizable pipeline rankings that are close to the oracle rankings. We thus establish STRABLE as a foundation for research on tabular learning with strings, an important yet understudied area.
Gioia Blayer, Myung Jun Kim, Félix Lefebvre +8
May 12, 2026cs.LG

Investigating simple target-covariate relationships for Chronos-2 and TabPFN-TS

Time Series Foundation Models (TSFMs) have recently achieved state-of-the-art performance, often outperforming supervised models in zero-shot settings. Recent TSFM architectures, such as Chronos-2 and TabPFN-TS, aim to integrate covariates. In this paper, we design controlled experiments based on simple target-covariate relationships to assess this integration capability. Our results show that TabPFN-TS captures these relationships more effectively than Chronos-2, especially for short horizons, suggesting that the strong benchmark performance of Chronos-2 does not automatically translate into optimal modeling of simple covariate-target dependencies.
Gaspard Berthelier, Mariia Baranova, Andrei-Tiberiu Pantea +4
May 12, 2026cs.LG

Resilient Vision-Tabular Multimodal Learning under Modality Missingness

Multimodal deep learning has shown strong potential in medical applications by integrating heterogeneous data sources such as medical images and structured clinical variables. However, most existing approaches implicitly assume complete modality availability, an assumption that rarely holds in real-world clinical settings where entire modalities and individual features are frequently missing. In this work, we propose a multimodal transformer framework for joint vision-tabular learning explicitly designed to operate under pervasive modality missingness, without relying on imputation or heuristic model switching. The architecture integrates three components: a vision, a tabular, and a multimodal fusion encoder. Unimodal representations are weighted through learnable modality tokens and fused via intermediate fusion with masked self-attention, which excludes missing tokens and modalities from information aggregation and gradient propagation. To further enhance resilience, we introduce a modality-dropout regularization strategy that stochastically removes available modalities during training, encouraging the model to exploit complementary information under partial data availability. We evaluate our approach on the MIMIC-CXR dataset paired with structured clinical data from MIMIC-IV for multilabel classification of 14 diagnostic findings with incomplete annotations. Two parallel systematic stress-test protocols progressively increase training and inference missingness in each modality separately, spanning fully multimodal to fully unimodal scenarios. Across all missingness regimes, the proposed method consistently outperforms representative baselines, showing smoother performance degradation and improved robustness. Ablation studies further demonstrate that attention-level masking and intermediate fusion with joint fine-tuning are key to resilient multimodal inference.
Camillo Maria Caruso, Valerio Guarrasi, Paolo Soda
May 12, 2026cs.LG

MaskTab: Scalable Masked Tabular Pretraining with Scaling Laws and Distillation for Industrial Classification

Tabular data forms the backbone of high-stakes decision systems in finance, healthcare, and beyond. Yet industrial tabular datasets are inherently difficult: high-dimensional, riddled with missing entries, and rarely labeled at scale. While foundation models have revolutionized vision and language, tabular learning still leans on handcrafted features and lacks a general self-supervised framework. We present MaskTab, a unified pre-training framework designed specifically for industrial-scale tabular data. MaskTab encodes missing values via dedicated learnable tokens, enabling the model to distinguish structural absence from random dropout. It jointly optimizes a hybrid supervised pre-training scheme--utilizing a twin-path architecture to reconcile masked reconstruction with task-specific supervision--and an MoE-augmented loss that adaptively routes features through specialized subnetworks. On industrial-scale benchmarks, it achieves +5.04% AUC and +8.28% KS over prior art under rigorous scaling. Moreover, its representations distill effectively into lightweight models, yielding +2.55% AUC and +4.85% KS under strict latency and interpretability constraints, while improving robustness to distribution shifts. Our work demonstrates that tabular data admits a foundation-model treatment--when its structural idiosyncrasies are respected.
Bo Zheng, Yudong Chen, Zihua Xiong +4
May 11, 2026cs.LG

V4FinBench: Benchmarking Tabular Foundation Models, LLMs, and Standard Methods on Corporate Bankruptcy Prediction

Corporate bankruptcy prediction is a high-stakes financial task characterized by severe class imbalance and multi-horizon forecasting demands. Public datasets supporting it remain scarce and small: widely used free benchmarks contain between 6,000 and 80,000 company-year observations, while larger resources are behind subscription paywalls. To address this gap, we introduce V4FinBench, a benchmark of over one million company-year records from the Visegràd Group (V4) economies (2006-2021), with 131 financial and non-financial features, six prediction horizons, and a composite distress criterion jointly capturing solvency, profitability, and liquidity deterioration. V4FinBench is designed to support the evaluation of tabular and foundation-model methods under realistic class imbalance, with positive rates between 0.19% and 0.36%. We provide reference evaluations of standard tabular baselines, finetuned TabPFN, and QLoRA-finetuned Llama-3-8B. With imbalance-aware finetuning, TabPFN matches or exceeds gradient boosting at longer time horizons on both F1F_1-score and ROC-AUC. In contrast, Llama-3-8B trails gradient boosting on ROC-AUC at every horizon and is generally weaker on F1F_1-score, with the gap widening sharply beyond the immediate horizon. In an external evaluation on the American Bankruptcy Dataset, the V4FinBench-finetuned TabPFN checkpoint improves over vanilla TabPFN, suggesting that adaptation captures transferable financial-distress structure rather than only V4-specific patterns. V4FinBench is publicly released to support further evaluation and development of prediction methods on realistic financial data.
Marcin Kostrzewa, Sebastian Tomczak, Roman Furman +5
May 11, 2026cs.LG

MulTaBench: Benchmarking Multimodal Tabular Learning with Text and Image

Tabular Foundation Models have recently established the state of the art in supervised tabular learning, by leveraging pretraining to learn generalizable representations of numerical and categorical structured data. However, they lack native support for unstructured modalities such as text and image, and rely on frozen, pretrained embeddings to process them. On established Multimodal Tabular Learning benchmarks, we show that tuning the embeddings to the task improves performance. Existing benchmarks, however, often focus on the mere co-occurrence of modalities; this leads to high variance across datasets and masks the benefits of task-specific tuning. To address this gap, we introduce MulTaBench, a benchmark of 40 datasets, split equally between image-tabular and text-tabular tasks. We focus on predictive tasks where the modalities provide complementary predictive signal, and where generic embeddings lose critical information, necessitating Target-Aware Representations that are aligned with the task. Our experimental results demonstrate that the gains from target-aware representation tuning generalize across both text and image modalities, several tabular learners, encoder scales, and embedding dimensions. MulTaBench constitutes the largest image-tabular benchmarking effort to date, spanning high-impact domains such as healthcare and e-commerce. It is designed to enable the research of novel architectures which incorporate joint modeling and target-aware representations, paving the way for the development of novel Multimodal Tabular Foundation Models.
Alan Arazi, Eilam Shapira, Shoham Grunblat +8
May 11, 2026stat.ML

Amortizing Causal Sensitivity Analysis via Prior Data-Fitted Networks

Causal sensitivity analysis aims to provide bounds for causal effect estimates in the presence of unobserved confounding. However, existing methods for causal sensitivity analysis are per-instance procedures, meaning that changes to the dataset, causal query, sensitivity level, or treatment require new computation. Here, we instead present an in-context learning approach. Specifically, we propose an amortized approach to causal sensitivity analysis based on prior-data fitted networks. A key challenge is that the sensitivity bounds are not directly available when sampling training data. To address this, we develop a general prior-data construction that is applicable across the class of generalized treatment sensitivity models. Our construction involves a Lagrangian scalarization of the objective to generate training labels for the bounds through a tradeoff between causal effect min/max-imization and sensitivity model violation, which avoids model-specific analytical derivations. We further show that, under standard convexity and linearity conditions, our objective recovers the full Pareto frontier of solutions. Empirically, we demonstrate our amortized approach across various datasets, causal queries, and sensitivity levels, where our approach achieves a test-time computation that is orders of magnitude faster than per-instance methods. To the best of our knowledge, ours is the first foundation model for in-context learning for causal sensitivity analysis.
Emil Javurek, Dennis Frauen, Marie Brockschmidt +2
May 11, 2026stat.ML

PFN-TS: Thompson Sampling for Contextual Bandits via Prior-Data Fitted Networks

Thompson sampling is a widely used strategy for contextual bandits: at each round, it samples a reward function from a Bayesian posterior and acts greedily under that sample. Prior-data fitted networks (PFNs), such as TabPFN v2+ and TabICL v2, are attractive candidates for this purpose because they approximate Bayesian posterior predictive distributions in a single forward pass. However, PFNs predict noisy future rewards, while Thompson sampling requires uncertainty over the latent mean reward function. We propose PFN-TS, a Thompson sampling algorithm that converts PFN posterior predictives into mean-reward samples using a subsampled predictive central limit theorem. The method estimates posterior variance from a geometric grid of O(log⁡n)O(\log n) dataset prefixes rather than the full O(n)O(n) predictive sequence used in previous predictive-sequence approaches, and reuses TabICL's cached representations across rounds. We prove consistency of the subsampled variance estimator and give a Bayesian regret bound that decomposes PFN-TS regret into exact posterior-sampling regret under the PFN prior plus approximation terms. Empirically, PFN-TS achieves the best average rank across nonlinear synthetic and OpenML classification-to-bandit benchmarks, remains competitive on linear and BART-generated rewards, and attains the highest estimated policy value in an offline mobile-health evaluation. Code is available at https://anonymous.4open.science/r/PFN_TS-36ED/.
Yan Shuo Tan, Kenyon Ng, Ruizhe Deng +3
May 10, 2026cs.LG

Tabular Foundation Model for Generative Modelling

Generative modelling is a demanding test of foundation models, because it requires robust, holistic representation learning for a given data modality, rather than optimisation for a supervised prediction target alone. While recent work on tabular foundation models has achieved remarkable progress in predictive modelling, generative tabular foundation models remain underexplored. Existing tabular foundation generators, in particular, have not yet consistently matched strong dataset-specific generators in synthetic data quality. A key reason is their misalignment with the distinctive causal structural prior of heterogeneous tabular data. In this paper, we address this gap by introducing a novel tabular foundation model, \textbf{TabFORGE}, built on pretrained \textbf{Tab}ular \textbf{FO}undational \textbf{R}epresentations for \textbf{GE}neration. TabFORGE is designed to utilise the implicitly learned causal information underlying diverse tabular datasets in a unified latent space induced by a pretrained causality-aware feature encoder. It further decouples latent modelling from decoding through a two-stage design: we first pretrain a score-based diffusion transformer, and then pretrain a denoising-aligned decoder using the denoised latent embeddings. This design elegantly mitigates the distribution shifts in latent embeddings that typically arise between training and inference. We evaluate TabFORGE comprehensively against 22 benchmark methods on 45 real-world datasets. Our results show that TabFORGE effectively learns and leverages generalisable tabular representations, enabling efficient generation of high-quality synthetic tabular data, particularly with strong structural fidelity.
Xiangjian Jiang, Mingxuan Liu, Nikola Simidjievski +2
May 9, 2026cs.LG

PRIM: Meta-Learned Bayesian Root Cause Analysis

Root cause analysis (RCA) in complex systems is challenging due to error propagation across multiple variables, the need for structural causal knowledge, and the computational cost of inference at test time. We introduce PRIM (Prior-fitted Root cause Identification with Meta-learning), a causal meta-learning approach that frames RCA as a Bayesian inference task over a synthetic prior of causal models. By marginalising out structural uncertainty, PRIM implicitly identifies changes in the data-generating mechanism between baseline and anomalous periods. In doing so, PRIM infers distributional differences without explicit statistical testing, and implicitly learns causal structure without model fitting at test time. Following the simulation-based meta-learning paradigm of prior-fitted networks, PRIM uses a Model-Averaged Causal Estimation (MACE) transformer neural process that jointly attends over observational and anomalous samples and the causal structure of nodes, enabling zero-shot inference in 17,ms for systems with up to 100 variables. Across synthetic benchmarks and two realistic benchmark datasets, PetShop and CausRCA, PRIM is competitive with methods that are aware of the system's causal graphical structure a priori while outperforming graph-unaware methods on several tasks. Lightweight fine-tuning to specific domains and data dynamics improves performance further.
Christopher Lohse, Anish Dhir, Amadou Ba +3
May 8, 2026cs.LG

SeBA: Semi-supervised few-shot learning via Separated-at-Birth Alignment for tabular data

Learning from scarce labeled data with a larger pool of unlabeled samples, known as semi-supervised few-shot learning (SS-FSL), remains critical for applications involving tabular data in domains like medicine, finance, and science. The existing SS-FSL methods often rely on self-supervised learning (SSL) frameworks developed for vision or language, which assume the availability of a natural form of data augmentations. For tabular data, defining meaningful augmentations is non-trivial and can easily distort semantics, limiting the effectiveness of conventional SSL. In this work, we rethink SSL for tabular data and propose Separated-at-Birth Alignment (SeBA), a joint-embedding framework for SS-FSL that eliminates the dependence on augmentations. Our core idea is to separate the data into two independent, but complementary views and align the representations of one view to mirror the nearest-neighbor correspondence of the data in the second view. Our experimental evaluation supported by a theoretical analysis justifies that SeBA generates an output space, which improves the feature-label relationship. An experimental study conducted in various benchmark datasets demonstrates that SeBA achieves the state-of-the-art performance in the majority of cases, opening a new avenue for SS-FSL paradigm in the domain of tabular data.
Kacper Jurek, Wojciech Batko, Marek Śmieja +1
May 8, 2026cs.LG

Toward Privileged Foundation Models:LUPI for Accelerated and Improved Learning

Training foundation models is computationally intensive and often slow to converge. We introduce PIQL,Privileged Information for Quick and Quality Learning, the first framework to systematically integrate privileged information (PI) to simultaneously accelerate learning and improve generalization in tabular foundation models (TFMs). We construct two complementary forms of PI: (i) aggregate dataset-level statistics that reduce the burden on in-context learning, and (ii) encodings of the underlying data-generating program, providing knowledge beyond observable data. We further design an architecture that effectively transfers the train-time-only PI by learning to reconstruct it from observed context at inference. We provide a theoretical analysis characterizing conditions under which PI reduces the population-level approximation gap and accelerates convergence in finite-data regimes. Empirical evidence shows that PIQL enables TFMs to achieve faster convergence, lower final loss, and better generalization, in effect, reducing data and compute requirements. Our work establishes PI-guided pretraining as a principled and practical paradigm for improving the efficiency and performance of foundation models.
Xueying Ding, Leman Akoglu
May 8, 2026cs.LG

Pre-trained Tabular Foundation Models as Versatile Summary Networks for Neural Posterior Estimation

In this work, we study TabPFN as a training-free, modular summary network for simulation-based Bayesian inference (SBI). Tabular foundation models such as TabPFN are pretrained on broad families of synthetic tabular data-generating processes and adapt at test time through in-context learning, making them natural candidates for SBI, where posterior estimation often depends on learning informative summaries of simulated observations. We propose PFN-NPE: a general recipe that uses a pretrained TabPFN encoder as a fixed summary network for simulator outputs, then pairs the resulting summaries with a downstream inference head chosen for the problem. With normalizing flows as the default inference head, PFN-NPE matches established posterior approximation methods and sometimes outperforms them. More importantly, diagnostic probes show that the TabPFN-derived summaries often preserve useful posterior location and marginal information. These analyses also reveal a limitation in that TabPFN-derived summaries may struggle to represent the joint posterior structure even when the marginals are well recovered. Still, our experiments show that TabPFN can serve as an effective summary network across a diverse set of SBI settings, with the inference network left modular and task-dependent.
Elliot Pickens, Chiraag Gohel, Sidharth Satya
May 8, 2026cs.CV

Breaking Spatial Uniformity: Prior-Guided Mamba with Radial Serialization for Lens Flare Removal

Lens flares, caused by complex optical aberrations, severely degrade image quality especially in nighttime photography. Although recent restoration methods have made remarkable progress, most still rely on spatially uniform processing. They are failing to handle the region-dependent restoration demands of flare scenes, where saturated light sources should be preserved, flare artifacts removed, and background details recovered. To address this challenge, we propose DeflareMambav2, a prior-guided Mamba framework for lens flare removal. Specifically, we introduce a Flare Prior Network (FPN) to estimate flare priors and guide adaptive restoration. Besides, a novel radial serialization strategy breaks spatially homogeneous processing by performing flare-aware targeted sampling, and better supports long-range modeling in State Space Models (SSMs). Based on these priors, the backbone adopts a dual-level adaptive scheme. It explicitly preserves light-source regions to avoid over-processing, and applies curriculum-based restoration to the remaining contaminated areas while calibrating restoration intensity at the pixel level. Extensive experiments demonstrate that DeflareMambav2 achieves state-of-the-art performance with reduced parameter burden. Code is available at https://github.com/BNU-ERC-ITEA/DeflareMambav2.
Zijia Fu, Yuanfei Huang, Lizhi Wang +1
May 7, 2026cs.AI

SpatialEpiBench: Benchmarking Spatial Information and Epidemic Priors in Forecasting

Accurate epidemic forecasting is crucial for public health response, resource allocation, and outbreak intervention, but remains difficult with sparse, noisy, and highly non-stationary data. Because epidemics unfold across interacting regions, spatiotemporal methods are natural candidates for improving forecasts. Despite growing interest in spatial information, no standardized benchmark exists, and current evaluations often use simple chronological train-test splits that do not reflect real-time forecasting practice. We address this gap with SpatialEpiBench, a challenging benchmark for spatiotemporal epidemic forecasting in realistic public-health settings. SpatialEpiBench includes 11 epidemic datasets with standardized rolling evaluations and outbreak-specific metrics. We evaluate adjacency-informed forecasting models with widely used epidemic priors that adapt general models to epidemiology, but find that most methods underperform a simple last-value baseline from 1 day to 1 month ahead, even during outbreaks and with these priors. We identify three major failure modes: (1) poor outbreak anticipation, (2) difficulty handling sparsity and noise, and (3) limited utility of common geographic adjacency for epidemiological spatial information. We release benchmark data, code, and instructions at https://github.com/Rachel-Lyu/SpatialEpiBench to support development of operationally useful epidemic forecasting models.
Ruiqi Lyu, Alistair Turcan, Bryan Wilder
May 7, 2026cs.LG

Is One Layer Enough? Understanding Inference Dynamics in Tabular Foundation Models

Transformer-based tabular foundation models (TFMs) dominate small to medium tabular predictive benchmark tasks, yet their inference mechanisms remain largely unexplored. We present the first large-scale mechanistic study of layerwise dynamics in 6 state-of-the-art tabular in-context learning models. We explore how predictions emerge across depth, identify distinct stages of inference and reveal latent-space dynamics that differ from those of language models. Our findings indicate substantial depthwise redundancy across multiple models, suggesting iterative refinement with overlapping computations during inference stages. Guided by these insights, we design a proof-of-concept, looped single-layer model that uses only 20% of the original model's parameters while achieving comparable performance. The code is available at https://github.com/amirbalef/is_one_layer_enough.
Amir Rezaei Balef, Mykhailo Koshil, Katharina Eggensperger
May 7, 2026stat.ML

Decoupled PFNs: Identifiable Epistemic-Aleatoric Decomposition via Structured Synthetic Priors

Prior-Fitted Networks (PFNs) amortize Bayesian prediction by meta-learning over a synthetic task prior, but their standard output is a posterior predictive distribution over noisy observations. For sequential decision-making, such as active learning and Bayesian optimization, acquisition should prioritize epistemic uncertainty about the latent signal rather than irreducible aleatoric observation noise. We show that this epistemic--aleatoric split is not identifiable in general from the posterior predictive distribution alone, even when that distribution is known exactly. We then exploit a distinctive advantage of PFNs: because the synthetic data-generating process is under our control, each task can contain an explicit latent signal and noise function, and the generator can provide query-level labels for both the noiseless target and the observation-noise variance. We use these labels to train a decoupled PFN with separate latent-signal and aleatoric heads. The observation-level predictive is induced by convolving the latent signal distribution with the learned noise model. Empirically, epistemic-only acquisition mitigates the failure mode of total-variance exploration in noisy and heteroscedastic settings. In matched comparisons, decoupled models usually improve over tuned observation-level baselines, with the clearest gains in HPO; in broader sweeps, a decoupled model obtains the best average rank in both HPO and synthetic BO.
Richard Bergna, Stefan Depeweg, José Miguel Hernández-Lobato
May 7, 2026cs.AI

Mind the Gap? A Distributional Comparison of Real and Synthetic Priors for Tabular Foundation Models

Tabular foundation models are pre-trained on one of three classes of corpus: curated datasets drawn from benchmark repositories, tables harvested at scale from the web, or synthetic tables sampled from a parametric generative prior. Despite the centrality of pre-training data to model performance, little is known about how these corpora relate to one another in distribution, and the impact this has on downstream performance. In this work we take three canonical, archetypal datasets used to train tabular foundation models; the T4 dataset represents web-scraped corpora, the TabFM dataset curated tables from Kaggle, and the TabICL dataset as the only well-used synthetic prior with publicly available parameters. We characterise each corpus using aggregate features over whole tables, columns and correlations, and compare them using discriminator AUCs and k-NN coverage metrics. We find that the TabICL synthetic prior occupies a narrow region of the space of real tables, that this mismatch cannot be closed by optimising prior hyper-parameters across more than 86 thousand configurations, and that curated and web-scraped corpora are broadly interchangeable on a distributional level in feature space. Surprisingly, the distributional gap between synthetic pre-training data and real tables has a clearly detectable effect on performance under neither feature-based proximity measures or TabICL's own internal representations, suggesting that coverage of the real-data distribution is not the primary driver of TabICL's generalisation.
Alex O. Davies, Telmo de Menezes e Silva Filho, Nirav Ajmeri
May 7, 2026cs.AI

Data Language Models: A New Foundation Model Class for Tabular Data

Every major data modality now has a foundation model that understands it natively: text has language models, images have vision models, audio has audio models. Tabular data, the modality on which many consequential real-world AI decisions are made, does not. Every approach to tabular AI today, from gradient-boosted trees to the latest tabular foundation models, requires a preprocessing pipeline before any model can consume the data. None of them understand tabular data as a modality. We introduce the Data Language Model (DLM), the missing foundation model for tabular data. A DLM understands tables the way a language model understands sentences: natively, without serialization or preprocessing, directly from raw cell values. It is the tabular data layer on which AI models, agents, and vertical AI applications can be built, eliminating the preprocessing pipelines that currently stand between raw data and every AI system that consumes it. We present Schema-1, the first DLM: a 140M parameter model trained on more than 2.3M synthetic and real-world tabular datasets. Schema-1 outperforms gradient-boosted ensembles, AutoML stacks, and the tabular foundation models we evaluate on established row-level prediction benchmarks. On missing value reconstruction it achieves lower reconstruction error than all classical statistical methods and frontier large language models on mean performance across conditions, establishing that structural understanding of a dataset's own distributional geometry is more useful for imputation than world knowledge encoded in language. It identifies the industry sector of any unseen dataset from raw cell values alone, reliably across any domain, a task no prior tabular model can perform. It is the native tabular understanding layer that has been missing from the AI stack.
Eda Erol, Giuliano Pezzoli, Ozer Cem Kelahmet
May 7, 2026cs.LG

BoostLLM: Boosting-inspired LLM Fine-tuning for Few-shot Tabular Classification

Large language models (LLMs) have recently been adapted to tabular prediction by serializing structured features into natural language, but their performance in low-data regimes remains limited compared to gradient-boosted decision trees (GBDTs). In this work, we revisit the boosting paradigm, traditionally associated with tree ensembles, and ask whether it can be applied as a general training principle for LLM fine-tuning. We propose BoostLLM, a framework that transforms parameter-efficient fine-tuning into a multi-round residual optimization process by training sequential PEFT adapters as weak learners. To incorporate tabular inductive bias, BoostLLM integrates decision-tree paths as a second input view alongside raw features; analysis reveals that the path view acts as a structured teacher in early training steps before the model shifts toward feature-driven representations. Empirically, BoostLLM achieves consistent improvements over standard fine-tuning across multiple LLM backbones and datasets, matching or surpassing XGBoost across a wide range of shot counts and outperforming GPT-4o-based methods with a 4B model. We further show that the framework scales: pairing with stronger tree models and extended boosting horizons yields additional gains under appropriate stabilization. These results suggest that boosting can serve as a general training principle for LLM fine-tuning, particularly in low-data regimes for structured data.
Yi-Siang Wang, Kuan-Yu Chen, Yu-Chen Den +1
May 7, 2026cs.LG

TFM-Retouche: A Lightweight Input-Space Adapter for Tabular Foundation Models

Tabular foundation models (TFMs), such as TabPFN-2.6, TabICLv2, ConTextTab, Mitra, LimiX, and TabDPT, achieve strong zero-shot performance through in-context learning, but their inductive biases remain fixed at inference time. Adapting a pretrained TFM to a specific dataset or task typically requires either full fine-tuning, which is computationally expensive, or parameter-efficient tuning methods (PEFT) such as LoRA, which must be tailored to the internal architecture of each TFM. Furthermore, the evidence on whether weight-space fine-tuning improves accuracy or calibration is mixed \citep{tanna_exploring_2026,rubachev_finetuning_2025}. We introduce TFM-Retouche, a lightweight input-space residual adapter that is architecture-agnostic by design with respect to the frozen TFM backbone. TFM-Retouche learns a small residual correction in the input space to align the input data with the inductive biases of the pretrained model. The adapter is trained end-to-end through the frozen TFM, with a post-training identity guard that falls back to the unmodified TFM whenever adaptation does not help on held-out validation. On TabArena-Lite (51 datasets spanning binary classification, multiclass classification, and regression), TabICLv2-Retouche -- the framework instantiated on TabICLv2 -- is the top-ranked method on the leaderboard with light per-task tuning and ensembling, lifting aggregate Elo by +56 over the frozen TabICLv2 base and sitting on the Pareto front of predictive quality versus both training and inference time.
Duong Nguyen, Mohammed Jawhar, Nicolas Chesneau
May 7, 2026cs.CV

PlotPick: AI-powered batch extraction of numerical data from scientific figures

Systematic reviews and meta-analyses frequently require numerical data that authors report only as figures, yet manual digitisation is slow and does not scale. We present PlotPick, an open-source tool that uses vision-language models (VLMs) to batch-extract structured tabular data from scientific figures. We evaluate six VLMs from three providers on two established chart-to-table benchmarks (ChartX and PlotQA) and compare against the dedicated chart-to-table model DePlot. All six VLMs outperform DePlot on both benchmarks. On ChartX (restricted to bar charts, line charts, box plots, and histograms; n=300), VLMs achieve 88-96% recall versus 71% for DePlot. On PlotQA (n=529), VLMs achieve 86-99% RMSF1 versus 94% for DePlot. The gap is largest on chart types absent from the dedicated models' training data: on box plots, DePlot achieves 24% RMSF1 while VLMs achieve 83-97%. PlotPick is available at https://plotpick.streamlit.app.
Tommy Carstensen
May 7, 2026stat.ML

TabCF: Distributional Control Function Estimation with Tabular Foundation Models

Instrumental variable (IV) and control function (CF) methods are powerful tools for causal effect estimation in the presence of unmeasured confounding, yet most existing approaches target only mean effects and/or demand substantial fitting and tuning effort. In this paper, we introduce a simple method, TabCF, for control function regression using tabular foundation models, which enables accurate, fast, identification-transparent, and tuning-light causal estimation of distributional quantities, such as interventional means and quantiles; we also propose a copula-based approximation for multivariate outcomes. TabCF performs favorably against representative methods across a broad range of small- to medium-sized synthetic and real data scenarios. The central message is two-fold: for practitioners, it highlights that TabCF is an effective tool for distributional causal inference; for researchers, it suggests that the proposed approach could be considered a strong baseline for future method development. Code is available at https://github.com/GepingChen/TabCF.
Geping Chen, Chunlin Li, Tianzhong Yang +2
May 6, 2026cs.CL

TabEmbed: Benchmarking and Learning Generalist Embeddings for Tabular Understanding

Foundation models have established unified representations for natural language processing, yet this paradigm remains largely unexplored for tabular data. Existing methods face fundamental limitations: LLM-based approaches lack retrieval-compatible vector outputs, whereas text embedding models often fail to capture tabular structure and numerical semantics. To bridge this gap, we first introduce the Tabular Embedding Benchmark (TabBench), a comprehensive suite designed to evaluate the tabular understanding capability of embedding models. We then propose TabEmbed, the first generalist embedding model that unifies tabular classification and retrieval within a shared embedding space. By reformulating diverse tabular tasks as semantic matching problems, TabEmbed leverages large-scale contrastive learning with positive-aware hard negative mining to discern fine-grained structural and numerical nuances. Experimental results on TabBench demonstrate that TabEmbed significantly outperforms state-of-the-art text embedding models, establishing a new baseline for universal tabular representation learning. Code and datasets are publicly available at https://github.com/qiangminjie27/TabEmbed and https://huggingface.co/datasets/qiangminjie27/TabBench.
Minjie Qiang, Mingming Zhang, Xiaoyi Bao +5
May 6, 2026cs.LG

Breaking the Quality-Privacy Tradeoff in Tabular Data Generation via In-Context Learning

Tabular data synthesis aims to generate high-quality data while preserving privacy. However, we find that existing tabular generative models exhibit a clear tradeoff in the small-data regime: improving data quality typically comes at the cost of increased memorization of training samples, thereby weakening privacy protection. This tradeoff arises because small training sets make it difficult for dataset-specific generative models to distinguish generalizable structure from sample-specific patterns. To address this, we propose DiffICL, which formulates tabular data generation as an in-context learning problem. Instead of fitting each dataset from scratch,DiffICL leverages pretrained structural priors learned from a large collection of datasets, enabling it to infer data distributions from limited context rather than memorizing individual samples. We evaluate DiffICL on 14 real-world datasets. Results show that DiffICL improves both data quality and privacy, and generate synthetic data that provides effective data augmentation. Our findings suggest that the quality-privacy tradeoff can be improved through better training paradigms.
Xinyan Han, Yan Lu, Xiaoyu Lin +5
May 6, 2026cs.LG

ITBoost: Information-Theoretic Trust for Robust Boosting

Gradient boosting remains a strong and widely used method for tabular data learning, but its performance often degrades when training labels are noisy. This behavior is largely related to the way boosting algorithms emphasize samples with large gradients, without explicitly accounting for whether such errors originate from informative hard cases or from unreliable labels. We address this issue by reconsidering how sample reliability is evaluated during boosting. Instead of relying on instantaneous error, we examine the evolution of each sample's residuals across iterations. Based on this insight, we propose Information-Theoretic Trust Boosting (ITBoost), which uses the Minimum Description Length principle to measure the complexity of residual trajectories. Samples whose residual patterns fluctuate in an irregular manner are treated as less trustworthy and are down-weighted during learning. Theoretically, we derive a tighter generalization bound for ITBoost under label noise. Empirical results on various tabular benchmarks indicate that ITBoost provides improved robustness in noisy environments over leading boosting and deep tabular models, while retaining best average performance on clean data.
Ye Su, Longlong Zhao, Diego Garcia-Gil +4
May 6, 2026cs.LG

Mitigating Label Shift in Tabular In-Context Learning via Test-Time Posterior Adjustment

TabPFN has recently gained attention as a foundation model for tabular datasets, achieving strong performance by leveraging in-context learning on synthetic data. However, we find that TabPFN is vulnerable to label shift, often overfitting to the majority class in the training dataset. To address this limitation, we propose DistPFN, the first test-time posterior adjustment method designed for tabular foundation models. DistPFN rescales predicted class probabilities by downweighting the influence of the training prior (i.e., the class distribution of the context) and emphasizing the contribution of the model's predicted posterior, without architectural modification or additional training. We further introduce DistPFN-T, which incorporates temperature scaling to adaptively control the adjustment strength based on the discrepancy between prior and posterior. We evaluate our methods on over 250 OpenML datasets, demonstrating substantial improvements for various TabPFN-based models in classification tasks under label shift, while maintaining strong performance in standard settings without label shift. Code is available at this repository: https://github.com/seunghan96/DistPFN.
Seunghan Lee
May 5, 2026cs.LG

TabSurv: Adapting Modern Tabular Neural Networks to Survival Analysis

Survival analysis on tabular data is a well-studied problem. However, existing deep learning methods are often highly task-specific, which can limit the transfer of new approaches from other domains and introduce constraints that may affect performance. We propose TabSurv, an approach that adapts modern tabular architectures to survival analysis using either the Weibull distribution or non-parametric survival prediction. TabSurv optimizes SurvHL, a novel histogram loss function supporting censored data. In addition to a baseline feed-forward network, we implement deep ensembles of MLPs for survival analysis within TabSurv. In contrast to prior work, the ensemble components are trained in parallel, optimizing survival distribution parameters before averaging, which promotes diversity across ensemble component predictions. We perform a comprehensive empirical evaluation of different proposed architectures on 10 diverse real-world survival datasets. Our results show that TabSurv consistently outperforms on average established classical and deep learning baselines, such as RSF, DeepSurv, DeepHit, SurvTRACE. Notably, deep ensembles with Weibull parametrization instead of non-parametric models achieve the highest average rank by C-index. Overall, our study clarifies how modern tabular neural networks can be adapted and trained to tackle survival analysis problems, offering a strong and reliable approach. The TabSurv implementation is publicly available.
Stanislav Kirpichenko, Andrei Konstantinov, Lev Utkin
May 5, 2026cs.LG

DynaTab: Dynamic Feature Ordering as Neural Rewiring for High-Dimensional Tabular Data

High-dimensional tabular data lacks a natural feature order, limiting the applicability of permutation-sensitive deep learning models. We propose DynaTab, a dynamic feature ordering-enabled architecture inspired by neural rewiring. We introduce a lightweight criterion that predicts when feature permutation will benefit a dataset by quantifying its intrinsic complexity. DynaTab dynamically reorders features via a neural rewiring algorithm and processes them through a compact, dynamic order-aware combination of separate learned positional embedding, importance-based gating, and masked attention layers, compatible with any sequence-sensitive backbone. Trained end-to-end with bespoke dynamic feature ordering (DFO) and dispersion losses, DynaTab achieves statistically significant gains, particularly on high-dimensional datasets, where it is benchmarked against 45 state-of-the-art baselines across 36 different real-world tabular datasets. Our results position DynaTab as a compelling new paradigm for high-dimensional tabular deep learning.
Al Zadid Sultan Bin Habib, Gianfranco Doretto, Donald A. Adjeroh
May 4, 2026cs.LG

Evaluating Tabular Representation Learning for Network Intrusion Detection

Classic Network Intrusion Detection Systems (NIDS) often rely on manual feature engineering to extract meaningful patterns from network traffic data. However, this approach requires domain expertise and runs counter to the widely adopted principle of modern machine learning and neural networks: that models themselves should learn meaningful representations directly from data. We investigate whether tabular representation learning techniques can improve intrusion detection performance by automatically learning robust feature representations for NetFlow data. This paper presents a systematic evaluation of state-of-the-art representation learning methods on benchmark NetFlow datasets, comparing against traditional autoencoders and end-to-end transformer baselines. We evaluate learned representations using both supervised classifiers and unsupervised anomaly detectors, with comprehensive hyperparameter exploration for each combination. Our results reveal strong dataset-model dependency, with no single approach consistently dominating across all scenarios. For supervised classification, TabICL achieves the best performance on CIDDS, while autoencoders follow closely and tie with end-to-end transformer models for the best average rank across datasets. Supervised approaches substantially outperform unsupervised anomaly detection methods, where no single combination consistently dominates as optimal choices depend on the dataset. Cross-dataset transfer experiments demonstrate that learned representations can generalize across network environments with appropriate method and classifier selection. However, transfer performance varies substantially depending on the source-target dataset combination, indicating sensitivity to distributional differences between network environments.
Muhammad Usman Butt, Andreas Hotho, Daniel Schlör
May 4, 2026cs.CR

Privacy Preserving Machine Learning Workflow: from Anonymization to Personalized Differential Privacy Budgets in Federated Learning

The growing development of artificial intelligence based solutions, together with privacy legislation, has driven the rise of the so-called privacy preserving machine learning architectures, such as federated learning. While federated learning enables model training on decentralized data preventing their sharing and centralization, it still faces several challenges related to data integrity and privacy. This paper presents a comprehensive privacy preserving federated learning workflow for sensitive tabular data, including anonymization and differential privacy techniques. We also introduce a formal definition for the concept of client drift, together with ways of detecting it to mitigate poisoning attacks. Then, we detail a complete methodology for assigning personalized privacy budgets for global differential privacy to the different clients participating in the network, based on a re-identification risk metric. The proposed methodology is presented and tested on an openly available dataset of medical records. Within the experimental setup we show that the approach based on personalized budgets, compared to the architecture including global differential privacy with fixed privacy budget, achieves a better model performance in terms of two error metrics.
Judith Sáinz-Pardo Díaz, Álvaro López García
May 3, 2026cs.CV

VT-Bench: A Unified Benchmark for Visual-Tabular Multi-Modal Learning

Multi-model learning has attracted great attention in visual-text tasks. However, visual-tabular data, which plays a pivotal role in high-stakes domains like healthcare and industry, remains underexplored. In this paper, we introduce \textit{VT-Bench}, the first unified benchmark for standardizing vision-tabular discriminative prediction and generative reasoning tasks. VT-Bench aggregates 14 datasets across 9 domains (medical-centric, while covering pets, media, and transportation) with over 756K samples. We evaluate 23 representative models, including unimodal experts, specialized visual-tabular models, general-purpose vision-language models (VLMs), and tool-augmented methods, highlighting substantial challenges of visual-tabular learning. We believe VT-Bench will stimulate the community to build more powerful multi-modal vision-tabular foundation models. Benchmark: https://github.com/Ziyi-Jia990/VT-Bench
Zi-Yi Jia, Zi-Jian Cheng, Xin-Yue Zhang +4
May 2, 2026cs.CL

FT-RAG: A Fine-grained Retrieval-Augmented Generation Framework for Complex Table Reasoning

Retrieval-Augmented Generation (RAG) enhances Large Language Models (LLMs) by grounding responses in external knowledge during inference. However, conventiona RAG systems under-perform on structured tabular data, largely due to coarse retrieval granularity and insufficient table semantic comprehension. To address these limitations, we introduce FT-RAG, a fine-grained framework that employs knowledge association by decomposing tables into entry-level semantic units to construct a structured graph. FT-RAG employs a structural neighbor expansion mechanism to find semantically connected entities during graph retrieval, followed by multi-modal fusion to consolidate the context of table retrieval results. Further, to address the scarcity of specialized datasets in this domain, we introduce Multi-Table-RAG-Lib, a benchmark comprising 9870 QA pairs with high complexity and difficulty, curated to demand multi-table integration and text-table information fusion for reasoning. FT-RAG surpasses top-performing baselines across all metrics, achieving a 23.5% and 59.2% improvement in table-level and cell-level Hit Rates, respectively. Generation performance also sees a remarkable 62.2% increase in exact value accuracy recall. These metrics verify the framework's effectiveness in factual grounding across both pure tabular and heterogeneous table-text contexts. Therefore, our method establishes a new state-of-the-art performance for complex reasoning over mixed-modality documents.
Zebin Guo, Weidong Geng, Ruichen Mao
May 1, 2026cs.CV

WildTableBench: Benchmarking Multimodal Foundation Models on Table Understanding In the Wild

Using multimodal foundation models to analyze table images is a high-value yet challenging application in consumer and enterprise scenarios. Despite its importance, current evaluations rely largely on structured-text tables or clean rendered images, leaving the visual complexity of in-the-wild table images underexplored. Such images feature varied layouts and diverse domains that demand sophisticated structural perception and numerical reasoning. To bridge this gap, we introduce WildTableBench, the first question-answering benchmark for naturally occurring table images from real-world settings. WildTableBench comprises 402 high-information-density table images collected from online forums and websites across diverse domains, together with 928 manually annotated and verified questions spanning 17 subtypes across five categories. We evaluate 21 frontier proprietary and open-source multimodal foundation models on this benchmark. Only one model exceeds 50% accuracy, while all remaining models range from 4.1% to 49.9%. We further conduct diagnostic analyses to characterize model failures and reveal persistent weaknesses in structural perception and reasoning. These results and analyses provide useful insights into current model capabilities and establish WildTableBench as a valuable diagnostic benchmark for table image understanding. Dataset: https://huggingface.co/datasets/jzhuang/WildTableBench Code: https://github.com/hjzhe/WildTableBench Leaderboard: https://hjzhe.github.io/WildTableBench
Junzhe Huang, Xiaoxiao Sun, Yan Yang +6
May 1, 2026cs.LG

The Power of Order: Fooling LLMs with Adversarial Table Permutations

Large Language Models have achieved remarkable success and are increasingly deployed in critical applications involving tabular data, such as Table Question Answering. However, their robustness to the structure of this input remains a critical, unaddressed question. This paper demonstrates that modern LLMs exhibit a significant vulnerability to the layout of tabular data. Specifically, we show that semantically-invariant permutations of rows and columns - rearrangements that do not alter the table's underlying information - are sometimes sufficient to cause incorrect or inconsistent model outputs. To systematically probe this vulnerability, we introduce Adversarial Table Permutation, a novel, gradient-based attack that efficiently identifies worst-case permutations designed to maximally disrupt model performance. Our extensive experiments demonstrate that ATP significantly degrades the performance of a wide range of LLMs. This reveals a pervasive vulnerability across different model sizes and architectures, including the most recent and popular models. Our findings expose a fundamental weakness in how current LLMs process structured data, underscoring the urgent need to develop permutation-robust models for reliable, real-world applications.
Xinshuai Dong, Haifeng Chen, Xuyuan Liu +5
May 1, 2026cs.IR

FollowTable: A Benchmark for Instruction-Following Table Retrieval

Table Retrieval (TR) has traditionally been formulated as an ad-hoc retrieval problem, where relevance is primarily determined by topical semantic similarity. With the growing adoption of LLM-based agentic systems, access to structured data is increasingly instruction-driven, where relevance is conditional on explicit content and schema constraints rather than topical similarity alone. We therefore formalize Instruction-Following Table Retrieval (IFTR), a new task that requires models to jointly satisfy topical relevance and fine-grained instruction constraints. We identify two core challenges in IFTR: (i) sensitivity to content scope, such as inclusion and exclusion constraints, and (ii) awareness of schema-grounded requirements, including column semantics and representation granularity--capabilities largely absent in existing retrievers. To support systematic evaluation, we introduce FollowTable, the first large-scale benchmark for IFTR, constructed via a taxonomy-driven annotation pipeline. We further propose a new metric, termed the Instruction Responsiveness Score, to evaluate whether retrieval rankings consistently adapt to user instructions relative to a topic-only baseline. Our results indicate that existing retrieval models struggle to follow fine-grained instructions over tabular data. In particular, they exhibit systematic biases toward surface-level semantic cues and remain limited in handling schema-grounded constraints, highlighting substantial room for future improvements.
Rihui Jin, Yuchen Lu, Ting Zhang +7
May 1, 2026cs.CL

Structure-Aware Chunking for Tabular Data in Retrieval-Augmented Generation

Tabular documents such as CSV and Excel files are widely used in enterprise data pipelines, yet existing chunking strategies for retrieval-augmented generation (RAG) are primarily designed for unstructured text and do not account for tabular structure. We propose a structure-aware tabular chunking (STC) framework that operates on row-level units by constructing a hierarchical Row Tree representation, where each row is encoded as a key-value block. STC performs token-constrained splitting aligned with structural boundaries and applies overlap-free greedy merging to produce dense, non-overlapping chunks. This design preserves semantic relationships between fields within a row while improving token utilization and reducing fragmentation. Across evaluations on the MAUD dataset, STC reduces chunk count by up to 40% and 56% compared to standard recursive and key-value based baselines, respectively, while improving token utilization and processing efficiency. In retrieval benchmarks, STC improves MRR from 0.3576 to 0.5945 in a hybrid setting and increases Recall@1 from 0.366 to 0.754 in BM25-only retrieval. These results demonstrate that preserving structure during chunking improves retrieval performance, highlighting the importance of structure-aware chunking for RAG over tabular data.
Pooja Guttal, Varun Magotra, Vasudeva Mahavishnu +3
Apr 30, 2026cs.RO

Can Tabular Foundation Models Guide Exploration in Robot Policy Learning?

Policy optimization in high-dimensional continuous control for robotics remains a challenging problem. Predominant methods are inherently local and often require extensive tuning and carefully chosen initial guesses for good performance, whereas more global and less initialization-sensitive search methods typically incur high rollout costs. We propose TFM-S3, a tabular hybrid local-global method for improving global exploration in robot policy learning with limited rollout cost. We interleave high-frequency local updates with intermittent rounds of global search. In each search round, we construct a dynamically updated low-dimensional policy subspace via SVD and perform iterative surrogate-guided refinement within this space. A pretrained tabular foundation model predicts candidate returns from a small context set, enabling large-scale screening with limited rollout cost. Experiments on continuous control benchmarks show that TFM-S3 consistently accelerates early-stage convergence and improves final performance compared to TD3 and population-based baselines under an identical rollout budget. These results demonstrate that foundation models are a powerful new tool for creating sample-efficient policy learning methods for continuous control in robotics.
Buqing Ou, Frederike Dümbgen
Apr 30, 2026cs.LG

ZAYAN: Disentangled Contrastive Transformer for Tabular Remote Sensing Data

Learning informative representations from tabular data in remote sensing and environmental science is challenging due to heterogeneity, scarce labels, and redundancy among features. We present ZAYAN (Zero-Anchor dYnamic feAture eNcoding), a self-supervised, feature-centric contrastive framework for tabular data. ZAYAN performs contrastive learning at the feature rather than sample level, removing the need for explicit anchor selection and any reliance on class labels, while encouraging a redundancy-minimized, disentangled embedding space. The framework has two modules: ZAYAN-CL, which pretrains feature embeddings via a zero-anchor contrastive objective with dynamic perturbations and masking, and ZAYAN-T, a Transformer that conditions on these embeddings for downstream classification. Across eight datasets, including six remote-sensing tabular benchmarks and two remote-sensing-driven flood-prediction tables from satellite and GIS products, ZAYAN achieves superior accuracy, robustness, and generalization over tabular deep learning baselines, with consistent gains under label scarcity and distribution shift. These results indicate that feature-level contrastive learning and dynamic feature encoding provide an effective recipe for learning from tabular sensing data.
Al Zadid Sultan Bin Habib, Tanpia Tasnim, Md. Ekramul Islam +1
Apr 29, 2026cs.CV

VTBench: A Multimodal Framework for Time-Series Classification with Chart-Based Representations

Time-series classification (TSC) has advanced significantly with deep learning, yet most models rely solely on raw numerical inputs, overlooking alternative representations. While texture-based encodings such as Gramian Angular Fields (GAF) and Recurrence Plots (RP) convert time series into 2D images, they often require heavy preprocessing and yield less intuitive representations. In contrast, chart-based visualizations offer more interpretable alternatives and show promise in specific domains; however, their effectiveness remains underexplored, with limited systematic evaluation across chart types, visual encoding choices, and datasets. In this work, we introduce VTBench, a systematic and extensible framework that re-examines TSC through multimodal fusion of raw sequences and chart-based visualizations. VTBench generates lightweight, human-interpretable plots -- line, area, bar, and scatter, providing complementary views of the same signal. We develop a modular architecture supporting multiple fusion strategies, including single-chart visual-numerical fusion, multi-chart visual fusion, and full multimodal fusion with raw inputs. Through experiments across 31 UCR datasets, we show that: (1) chart-only models are competitive in selected settings, particularly on smaller datasets; (2) combining multiple chart types can improve accuracy by capturing complementary visual cues; and (3) multimodal models improve or maintain performance when visual features provide non-redundant information, but may degrade accuracy when they introduce redundancy. We further distill practical guidelines for selecting chart types, fusion strategies, and configurations. VTBench establishes a unified foundation for interpretable and effective multimodal time-series classification.
Madhumitha Venkatesan, Xuyang Chen, Dongyu Liu
Apr 29, 2026cs.AI

Evaluating TabPFN for Mild Cognitive Impairment to Alzheimer's Disease Conversion in Data Limited Settings

Accurate prediction of conversion from Mild Cognitive Impairment (MCI) to Alzheimers Diseases (AD) is essential for early intervention, however, developing reliable conversion predictive models is difficult to develop due to limited longitudinal data availability We evaluate TabPFN (Tabular Pre-Trained Foundation Network) against traditional machine learning methods for predicting 3 year MCI to AD conversion using the TADPOLE dataset derived from ADNI. Using multimodal biomarker features extracted from demographics, APOE4, MRI volumes, CSF markers, and PET imaging, we conducted an experimental comparison across varying training set sizes (N=50 to 1000) and models including XGBoost, Random Forest, LightGBM, and Logistic Regression. TabPFN achieved one the highest performance (AUC=0.892), outperforming LightGBM (AUC=0.860) and demonstrating advantages in low data settings. At N=50 training samples, TabPFN maintained strong AUC while the traditional machine learning models struggles at small training samples. These findings demonstrate that foundation models are promising for disease prediction in data limited scenarios, such as Alzheimers diseases.
Brad Ye, Bulent Soykan, Gulsah Hancerliogullari Koksalmis +2
Apr 29, 2026stat.ML

SCOPE-FE: Structured Control of Operator and Pairwise Exploration for Feature Engineering

Automatic feature engineering is an effective approach for improving predictive performance in tabular learning. However, expand-and-reduce methods, such as OpenFE, become increasingly computationally expensive as the input dimensionality grows. This limitation arises primarily from the combinatorial explosion of candidate features generated through operator-feature combinations. To address this issue, we propose SCOPE-FE, a structured search space control framework that improves efficiency by reducing the candidate space prior to feature generation. SCOPE-FE jointly regulates two major sources of combinatorial growth: the operator space and feature-pair space. First, OperatorProbing estimates the dataset-specific utility of candidate operators and eliminates low-contribution operators in advance. Second, FeatureClustering employs spectral embedding and fuzzy c-means clustering to group structurally related features, thereby restricting candidate generation to relevant within-cluster combinations. In addition, we introduce ReliabilityScoring, which incorporates variance across subsamples to stabilize pruning decisions. Experiments on ten benchmark datasets demonstrate that SCOPE-FE substantially reduces feature engineering time while maintaining competitive predictive performance relative to existing baselines. The efficiency gains are particularly pronounced for high-dimensional datasets. These results indicate that structured control of the search space is an effective strategy for scalable automatic feature engineering. The code will be made publicly available upon acceptance.
Minhee Park, Seongyeon Son, Yonghyun Lee +1
Apr 29, 2026cs.CL

Tree-of-Text: A Tree-based Prompting Framework for Table-to-Text Generation in the Sports Domain

Generating sports game reports from structured tables is a complex table-to-text task that demands both precise data interpretation and fluent narrative generation. Traditional model-based approaches require large, annotated datasets, while prompt-based methods using large language models (LLMs) often struggle with hallucination due to weak table comprehension. To overcome these challenges, we propose Tree-of-Text, a tree-structured prompting framework that guides LLMs through a three-stage generation process: (1) Content Planning, where relevant operations and arguments are selected from the input tables; (2) Operation Execution, which breaks down large tables into manageable sub-tables; and (3) Content Generation, where short textual outputs are merged and rewritten into a cohesive report. Experiments show that our method outperforms existing methods on ShuttleSet+, leads in RG and CO metrics on RotoWire-FG, and excels in CS and CO on MLB with roughly 40% of the time and cost of Chain-of-Table. These results demonstrate the effectiveness and efficiency of Tree-of-Text and suggest a promising direction for prompt-based table-to-text generation in the sports domain.
Shang-Hsuan Chiang, Tsan-Tsung Yang, An-Zi Yen +1
Apr 29, 2026cs.LO

Compressing ACAS-Xu Lookup Tables with Binary Decision Diagrams

The Airborne Collision Avoidance System Xu (ACAS-Xu) relies on large certified Look-Up Tables (LUTs) that encode the exact decision logic used in operation. Neural-network-based approximations have been proposed to reduce memory requirements, but they inherently introduce approximation errors and complicate formal verification. This paper presents a symbolic compression approach based on Binary Decision Diagrams (BDDs) that preserves the exact semantics of the ACAS-Xu LUTs. The resulting representation is canonical, deterministic, and fully equivalent to the original tables, enabling sound and exact reasoning over the complete decision logic. By expressing both the system behavior and domain-specific operational properties within a common Boolean framework, verification reduces to efficient BDD operations and emptiness checks, with precise counterexamples generated when properties are violated. We demonstrate that the proposed BDD-based representation significantly reduces memory usage, achieves predictable and low-latency execution, and can be deployed on embedded platforms. These results highlight BDDs as a compelling alternative for exact, verifiable, and embedded deployment of ACAS-Xu decision logic.
Martin Boniol, Julien Brunel, Jean-Baptiste Chaudron +2
Apr 28, 2026cs.LG

Knowledge-Data Dually Driven Paradigm for Accurate Landslide Susceptibility Prediction under Data-Scarce Conditions Using Geomorphic Priors and Tabular Foundation Model

Landslide susceptibility prediction is critical for geohazard risk assessment and mitigation. Conventional data-driven paradigm achieves high predictive accuracy but require sufficient conditioning factors and large-scale landslide inventories. However, in practical engineering applications across mountainous and plateau regions, data-scarce conditions are commonly observed, where such data requirements are rarely satisfied, rendering conventional data-driven paradigm inapplicable. To address this issue, we propose a knowledge-data dually driven paradigm for accurate landslide susceptibility prediction under data-scarce conditions. The essential idea behind the proposed novel paradigm is the integration of the geomorphic prior knowledge with scarce landslide data. To validate the proposed paradigm, we first applied it to a data-rich region in central Italy, where a conventional data-driven paradigm trained on the full dataset served as the baseline. By utilizing only 30% of the available landslide data, the proposed paradigm achieved comparable predictive accuracy to the baseline, demonstrating its effectiveness under data-scarce conditions. The paradigm was further evaluated in a genuinely data-scarce environment for application, the Qilian Permafrost Region of the Tibetan Plateau, where it also yielded reliable susceptibility predictions, confirming its applicability under data-scarce conditions.
Yuting Yang, Gang Mei, Feng Chen +2
Apr 28, 2026cs.LG

Accurate and Robust Generative Approach for Overcoming Data Sparsity and Imbalance in Landslide Modeling with A Tabular Foundation Model

Landslide investigation relies on sufficient and well-balanced observational data influenced by geological, hydrological, and anthropogenic factors. Available landslide inventories are often sparse and imbalanced, which limits understanding of triggering conditions and failure mechanisms. Data generation provides an effective approach to help capture feature dependencies from limited landslide observations. However, existing generation approaches for landslides often struggle to capture complex relationships among features and lack robustness across multiple scenarios and interacting factors. Here, we propose an accurate and robust approach for generating multi-feature landslide datasets by utilizing a tabular foundation model. By leveraging the capacity to learn from limited observations, the proposed approach effectively preserves the multivariate dependencies and statistical characteristics inherent in landslide occurrences. Comparative experiments on 20 landslide inventories demonstrate that the generated datasets closely align with observed distributions, maintain realistic feature dependencies, and exhibit robustness across different environmental contexts. This work provides an effective approach to overcome data sparsity and imbalance and strengthens landslide susceptibility modeling and risk assessment under limited observations.
Kaixuan Shao, Gang Mei, Yinghan Wu +2
Apr 28, 2026cs.LG

Model-Aware Data Cleaning for Tabular Foundation Models

Tabular Foundation Models (TFMs) achieve state-of-the-art zero-shot accuracy on small tabular datasets, but their in-context learning assumes approximately clean inputs: real- world missing values, outliers, and duplicates create a prior mismatch that degrades both accuracy and calibration. We study reinforcement learning for tabular data cleaning, a learned policy that sequences cleaning operators and introduce L2C-TFM with a model-aware reward (TFMAwareReward). We are explicit about what this reward optimizes: it regularizes the Wasserstein distance between the cleaned and the original (dirty) data, a distributional-stability term, which we measure as a diagnostic. Across six experiments on ten OpenML datasets: (i) three of seven reward designs collapse to degenerate strategies, so reward engineering is non-trivial; (ii) under an 8-seed repeated-holdout protocol the model-aware reward matches a random-forest-reward baseline on accuracy (p=0.38), with a benefit confined to minority-class macro-F1 under class imbalance that is partly a reward-agnostic calibrated-threshold effect; and (iii) a policy pre-trained on one dataset transfers to held-out datasets. A diagnostic analysis shows that the two distances are distinct objectives: cleaning tends to move data away from the prior, and prior-distance, not distance-to-dirty, is what tracks downstream quality. We therefore treat prior alignment as a motivating objective and a target for future work, not a property of the reward evaluated here. Code, datasets, and the nested evaluation harness are available at https://github.com/LaureBerti/Learn2Clean/tree/master/Learn2Clean_TFM.
Laure Berti-Equille
Apr 27, 2026cs.AI

Assessing Y-Axis Influence: Bias in Multimodal Language Models on Chart-to-Table Translation

Chart-to-table translation converts chart images into structured tabular data. Accurate translation is crucial for Multimodal Language Model (MLM) to answer complex queries. We observe imbalances in the number of images across different aspects of the y-axis information in public chart datasets. Such imbalances can introduce unintended biases, causing uneven MLM performance. Previous works have not systematically examined these biases. To address this gap, we propose a new framework, FairChart2Table, for analyzing y-axis-related bias on five state-of-the-art models. Key Findings: (1) There are significant y-axis biases related to the digit length of the major tick values, the number of major ticks, the range of values, and the tick value format (e.g., abbreviation or scientific format). (2) The number of legends/entities in chart images impacts MLM performance. (3) Prompting MLM with y-axis information can significantly enhance the performance for some MLMs.
Seok Hwan Song, Azher Ahmed Efat, Wallapak Tavanapong
Apr 27, 2026cs.CL

Improving Robustness of Tabular Retrieval via Representational Stability

Transformer-based table retrieval systems flatten structured tables into token sequences, making retrieval sensitive to the choice of serialization even when table semantics remain unchanged. We show that semantically equivalent serializations, such as csv\texttt{csv}, tsv\texttt{tsv}, html\texttt{html}, markdown\texttt{markdown}, and ddl\texttt{ddl}, can produce substantially different embeddings and retrieval results across multiple benchmarks and retriever families. To address this instability, we treat serialization embedding as noisy views of a shared semantic signal and use its centroid as a canonical target representation. We show that centroid averaging suppresses format-specific variation and can recover the semantic content common to different serializations when format-induced shifts differ across tables. Empirically, centroid representations outrank individual formats in aggregate pairwise comparisons across MPNet\texttt{MPNet}, BGE-M3\texttt{BGE-M3}, ReasonIR\texttt{ReasonIR}, and SPLADE\texttt{SPLADE}. We further introduce a lightweight residual bottleneck adapter on top of a frozen encoder that maps single-serialization embeddings towards centroid targets while preserving variance and enforcing covariance regularization. The adapter improves robustness for several dense retrievers, though gains are model-dependent and weaker for sparse lexical retrieval. These results identify serialization sensitivity as a major source of retrieval variance and show the promise of post hoc geometric correction for serialization-invariant table retrieval.
Kushal Raj Bhandari, Adarsh Singh, Jianxi Gao +2
Apr 26, 2026stat.ME

Generative Synthetic Data for Causal Inference: Pitfalls, Remedies, and Opportunities

Synthetic tabular data are often evaluated by distributional similarity, privacy distance, or train-on-synthetic-test-on-real predictive performance, but these criteria do not ensure validity for causal inference. We show that fully generative tabular synthesizers, including GAN- and LLM-based models, can preserve predictive utility while distorting average treatment effect (ATE) estimates. The failure is structural: ATE preservation requires both a realistic covariate law and an accurate treatment-effect contrast, whereas prediction loss penalizes treatment-effect error only through an overlap-weighted term. Thus, under imbalance or limited overlap, a generator may reproduce dominant observed outcomes while underlearning intervention-relevant contrasts. We formalize this mismatch through sensitivity and loss-decomposition results. Motivated by this causal analysis and intuition, we propose a hybrid synthetic-data framework for causal inference that generates covariates while modeling treatment and outcome mechanisms separately. We evaluate the framework in three settings: ATE preservation under fully generative versus hybrid synthesis, augmentation for practical positivity problems, and diagnostic simulation engines for comparing OR, IPW, AIPW, and TMLE before real-data analysis. We also stress-test the hybrid construction across settings that vary overlap, covariate dimension, seed sample size, and treatment-effect complexity, including a logistic outcome-model misspecification check. Across controlled simulation experiments, hybrid synthesis improves causal fidelity relative to fully generative baselines; the ACTG application shows improved predictive fidelity and potential for finite-sample estimator benchmarking. LLM-based hybrid synthesis is often more faithful than CTGAN in settings where causal fidelity can be assessed.
Yichen Xu
Apr 24, 2026cs.LG

FeatEHR-LLM: Leveraging Large Language Models for Feature Engineering in Electronic Health Records

Feature engineering for Electronic Health Records (EHR) is complicated by irregular observation intervals, variable measurement frequencies, and structural sparsity inherent to clinical time series. Existing automated methods either lack clinical domain awareness or assume clean, regularly sampled inputs, limiting their applicability to real-world EHR data. We present \textbf{FeatEHR-LLM}, a framework that leverages Large Language Models (LLMs) to generate clinically meaningful tabular features from irregularly sampled EHR time series. To limit patient privacy exposure, the LLM operates exclusively on dataset schemas and task descriptions rather than raw patient records. A tool-augmented generation mechanism equips the LLM with specialized routines for querying irregular temporal data, enabling it to produce executable feature-extraction code that explicitly handles uneven observation patterns and informative sparsity. FeatEHR-LLM supports both univariate and multivariate feature generation through an iterative, validation-in-the-loop pipeline. Evaluated on eight clinical prediction tasks across four ICU datasets, our framework achieves the highest mean AUROC on 7 out of 8 tasks, with improvements of up to 6 percentage points over strong baselines. Code is available at github.com/hojjatkarami/FeatEHR-LLM.
Hojjat Karami, David Atienza, Jean-Philippe Thiran +1
Apr 23, 2026cs.LG

Towards Universal Tabular Embeddings: A Benchmark Across Data Tasks

Tabular foundation models aim to learn universal representations of tabular data that transfer across tasks and domains, enabling applications such as table retrieval, semantic search and table-based prediction. Despite the growing number of such models, it remains unclear which approach works best in practice, as existing methods are often evaluated under task-specific settings that make direct comparison difficult. To address this, we introduce TEmBed, the Tabular Embedding Test Bed, a unified benchmark for systematically evaluating tabular embeddings across four representation levels: cell, row, column, and table. Evaluating a diverse set of tabular representation learning models, we show that which model to use depends on the task and representation level. Our results offer practical guidance for selecting tabular embeddings in real-world applications and lay the groundwork for developing more general-purpose tabular representation models.
Liane Vogel, Kavitha Srinivas, Niharika D'Souza +3
Apr 23, 2026cs.LG

Generalizing Numerical Reasoning in Table Data through Operation Sketches and Self-Supervised Learning

Numerical reasoning over expert-domain tables often exhibits high in-domain accuracy but limited robustness to domain shift. Models trained with supervised fine-tuning (SFT) on specific datasets tend to rely on header-operation shortcuts rather than structural reasoning. We introduce TaNOS, a continual pre-training framework comprising three components: (i) header anonymization to reduce lexical memorization, (ii) operation sketches that provide minimal structural cues, and (iii) self-supervised pretraining that constructs correctness-guaranteed program-question pairs from given tables in a program-first manner. By decoupling domain semantics and numerical operation structure, TaNOS improves the transferability of numerical reasoning. Applied to an 8B instruction-tuned model, TaNOS achieves 80.13% execution accuracy on FinQA with only 10% train data, outperforming SFT baseline (73.97%) with full train data and proprietary models such as GPT-5, Gemini-2.5-Pro. Furthermore, in the domain-shift experiments, TaNOS displays nearly-negligible cross-domain gap (<2pp) when standard SFT shows over 10pp gap. These results suggest that structural guidance with operation sketches, header-agnostic representations, and correctness-guaranteed self-supervision can improve the robustness of numerical reasoning across diverse expert-domain tables.
Hanjun Cho, Gahyun Yoo, Hanseong Kim +1
Apr 22, 2026cs.LG

TabSHAP

Large Language Models (LLMs) fine-tuned on serialized tabular data are emerging as powerful alternatives to traditional tree-based models, particularly for heterogeneous or context-rich datasets. However, their deployment in high-stakes domains is hindered by a lack of faithful interpretability; existing methods often rely on global linear proxies or scalar probability shifts that fail to capture the model's full probabilistic uncertainty. In this work, we introduce TabSHAP, a model-agnostic interpretability framework designed to directly attribute local query decision logic in LLM-based tabular classifiers. By adapting a Shapley-style sampled-coalition estimator with Jensen-Shannon divergence between full-input and masked-input class distributions, TabSHAP quantifies the distributional impact of each feature rather than simple prediction flips. To align with tabular semantics, we mask at the level of serialized key:value fields (atomic in the prompt string), not individual subword tokens. Experimental validation on the Adult Income and Heart Disease benchmarks demonstrates that TabSHAP isolates critical diagnostic features, achieving significantly higher faithfulness than random baselines and XGBoost proxies. We further run a distance-metric ablation on the same test instances and TabSHAP settings: attributions are recomputed with KL or L1 replacing JSD in the similarity step (results cached per metric), and we compare deletion faithfulness across all three.
Aryan Chaudhary, Prateek Agarwal, Tejasvi Alladi
Apr 22, 2026cs.AI

V-tableR1: Process-Supervised Multimodal Table Reasoning with Critic-Guided Policy Optimization

We introduce V-tableR1, a process-supervised reinforcement learning framework that elicits rigorous, verifiable reasoning from multimodal large language models (MLLMs). Current MLLMs trained solely on final outcomes often treat visual reasoning as a black box, relying on superficial pattern matching rather than performing rigorous multi-step inference. While Reinforcement Learning with Verifiable Rewards could enforce transparent reasoning trajectories, extending it to visual domains remains severely hindered by the ambiguity of grounding abstract logic into continuous pixel space. We solve this by leveraging the deterministic grid structure of tables as an ideal visual testbed. V-tableR1 employs a specialized critic VLM to provide dense, step-level feedback on the explicit visual chain-of-thought generated by a policy VLM. To optimize this system, we propose Process-Guided Direct Alignment Policy Optimization (PGPO), a novel RL algorithm integrating process rewards, decoupled policy constraints, and length-aware dynamic sampling. Extensive evaluations demonstrate that V-tableR1 explicitly penalizes visual hallucinations and shortcut guessing. By fundamentally shifting multimodal inference from black-box pattern matching to verifiable logical derivation, V-tableR1 4B establishes state-of-the-art accuracy among open-source models on complex tabular benchmarks, outperforming models up to 18x its size and improving over its SFT baseline
Yubo Jiang, Yitong An, Xin Yang +7
Apr 22, 2026cs.AI

Memory-Augmented LLM-based Multi-Agent System for Automated Feature Generation on Tabular Data

Automated feature generation extracts informative features from raw tabular data without manual intervention and is crucial for accurate, generalizable machine learning. Traditional methods rely on predefined operator libraries and cannot leverage task semantics, limiting their ability to produce diverse, high-value features for complex tasks. Recent Large Language Model (LLM)-based approaches introduce richer semantic signals, but still suffer from a restricted feature space due to fixed generation patterns and from the absence of feedback from the learning objective. To address these challenges, we propose a Memory-Augmented LLM-based Multi-Agent System (\textbf{MALMAS}) for automated feature generation. MALMAS decomposes the generation process into agents with distinct responsibilities, and a Router Agent activates an appropriate subset of agents per iteration, further broadening exploration of the feature space. We further integrate a memory module comprising procedural memory, feedback memory, and conceptual memory, enabling iterative refinement that adaptively guides subsequent feature generation and improves feature quality and diversity. Extensive experiments on multiple public datasets against state-of-the-art baselines demonstrate the effectiveness of our approach. The code is available at https://github.com/fxdong24/MALMAS
Fengxian Dong, Zhi Zheng, Xiao Han +5
Apr 22, 2026cs.LG

uLEAD-TabPFN: Uncertainty-aware Dependency-based Anomaly Detection with TabPFN

Anomaly detection in tabular data is challenging due to high dimensionality, complex feature dependencies, and heterogeneous noise. Many existing methods rely on proximity-based cues and may miss anomalies caused by violations of complex feature dependencies. Dependency-based anomaly detection provides a principled alternative by identifying anomalies as violations of dependencies among features. However, existing methods often struggle to model such dependencies robustly and to scale to high-dimensional data with complex dependency structures. To address these challenges, we propose uLEAD-TabPFN, a dependency-based anomaly detection framework built on Prior-Data Fitted Networks (PFNs). uLEAD-TabPFN identifies anomalies as violations of conditional dependencies in a learned latent space, leveraging frozen PFNs for dependency estimation. Combined with uncertainty-aware scoring, the proposed framework enables robust and scalable anomaly detection. Experiments on 57 tabular datasets from ADBench show that uLEAD-TabPFN achieves particularly strong performance in medium- and high-dimensional settings, where it attains the top average rank. On high-dimensional datasets, uLEAD-TabPFN improves the average ROC-AUC by nearly 20% over the average baseline and by approximately 2.8% over the best-performing baseline, while maintaining overall superior performance compared to state-of-the-art methods. Further analysis shows that uLEAD-TabPFN provides complementary anomaly detection capability, achieving strong performance on datasets where many existing methods struggle.
Sha Lu, Jixue Liu, Stefan Peters +4