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Jul 5, 2026cs.AI

Agentic SABRE: An Uncertainty-Aware Neuro-Symbolic Multi-Agent Framework for Adaptive Ransomware Detection

Ransomware has evolved into a complex, adaptive, and fast-moving adversary category in which static signatures and monolithic classifiers fail to generalise under concept drift, evasion, and behavioural polymorphism. In this paper, we present Agentic SABRE (Semantic-Behavioural Arbitration for Ransomware Evaluation), an uncertainty-aware, neuro-symbolic, multi-agent framework for adaptive ransomware detection. SABRE fuses semantic, representation-based evidence with behavioural, time-window forensic telemetry and employs Monte Carlo Dropout inference to quantify epistemic uncertainty for each agent. We introduce a decision-layer orchestrator that performs risk- and uncertainty-aware triage using two interpretable thresholds: a risk score and an uncertainty budget. High-confidence, high-risk samples are automatically contained, while uncertain or borderline cases are escalated to human analysts, establishing a flexible computational contract between autonomous response and analyst oversight. To support auditability and trust, SABRE integrates post-hoc explainability mechanisms, including gradient saliency, permutation importance, and counterfactual analysis, enabling both local and global interpretation of agent decisions. Extensive evaluation on RDset and RanSMAP demonstrates that Agentic SABRE preserves perfect discrimination on saturated semantic datasets, with AUC equal to 1.0, while improving robustness under weak behavioural signals. It achieves up to a 4.9 percent relative reduction in false escalations at equal recall while maintaining calibrated predictive uncertainty. Counterfactual analysis further shows that semantic and behavioural decisions can be reversed with bounded perturbation cost, indicating stable and interpretable decision boundaries.
Henry Kabuye, Biju Issac, Jeyamohan Neera
Jul 3, 2026cs.LG

Differentiate the Evaluator, Not the Program: An Efficient Runtime Representation for Neuro-Symbolic Learning

AI systems increasingly propose executable scientific models whose value depends on both their symbolic structure and their fitted continuous parameters. This makes parameter calibration the bottleneck of program-and-parameter co-search: an outer loop can generate thousands of candidate programs, but each needs an inner gradient-based optimization before it can be assessed. Staging each candidate into its own differentiable graph makes individual models fast but sacrifices the program-as-data property that keeps search fluid; interpreter-based approaches preserve programs as runtime data but pay interpreter overhead that dominates the numerical work. We present the Native Differentiable Virtual Machine (NDVM), a runtime representation that differentiates executable programs without compiling each candidate into a separate graph. NDVM separates symbolic structure from differentiable numeric state: tags, symbols, environments, and control remain native runtime data, while numeric payloads live in dense batched buffers with exact reverse-mode gradients recorded along the realized execution trace, so one evaluator walk is amortized across large populations of parameter vectors. A locked cost model of a real differentiable self-hosted Scheme interpreter motivates the design. We realize NDVM as a native runtime with forward and gradient equivalence to the reference backend, about 60x per-lane batch amortization, near-linear multicore scaling, and two independent front ends. In fixed-budget co-search over LLM-proposed programs, NDVM reaches high-quality solutions about 24x sooner in wall-clock time, suggesting runtime differentiation as a practical systems foundation for scientific discovery workflows.
Lucas Sheneman
Jul 3, 2026cs.LG

CoFEND: A Cross-Modal Fusion End-to-End Network for Cold-Start Drug-Drug Interaction Prediction

Cold-start drug-drug interaction (DDI) prediction for new drugs is critical for minimizing unexpected adverse drug reactions. The key challenge is to capture similarity between new and known drugs. However, such similarity is closely associated with complex relationships and mechanisms among drugs, enzymes, transporters, molecular structures, and other biomedical entities. Existing methods have three limitations in capturing such similarity: (1) only partial relationships and mechanisms are considered, which overlooks cross-modal information and yields incomplete or biased similarity modeling; (2) similarity computation between new and known drugs is conducted separately across modalities and performed offline for cold-start DDI prediction, leading to misalignment between similarity computation and DDI prediction; and (3) existing interpretability analyses are typically single-modality and focus primarily on key determinants of the perpetrator drug, while the underlying causes of susceptibility for the victim drug are seldom investigated. To address these issues, this paper proposes a novel Cross-Modal-Fused End-to-End Learning Network (CMF-ELN) with three components. First, diverse multimodal information is leveraged to construct four types of drug-centered knowledge graphs, enabling comprehensive similarity modeling under reconstruction-based supervision. Second, a four-channel graph autoencoder is designed to fuse cross-modal similarity within an end-to-end learning framework. Finally, a two-stage interpretability scheme is devised to precisely localize key factors for both perpetrator and victim drugs. Extensive experiments on two real datasets demonstrate that CMF-ELN achieves significantly higher prediction accuracy and more comprehensive interpretability of mechanisms than its peers.
Di Wu, Hongyi Sun, Haichao Xu +3
Jul 2, 2026cs.CV

Towards Robustness against Typographic Attack with Training-free Concept Localization

Models trained via Contrastive Language-Image Pretraining (CLIP) serve as the foundational vision encoders for most modern Large Vision Language Models (LVLMs). Despite their widespread adoption, CLIP models exhibit a critical yet underexplored failure mode: irrelevant text appearing within images confounds visual representations, biasing them toward lexical meaning rather than true visual semantics. This robustness issue, commonly described as a Typographic Attack (TA), exposes a vulnerability that poses a significant risk to safety-critical applications such as autonomous driving. To achieve interpretable and effective robustness against TA, we propose a novel, training-free mechanistic interpretability method. Our method provides sampling-based interpretations of hidden state representations and quantitatively attributes semantic versus lexical focus to individual attention heads. Through probabilistic analysis and circuit mining, we isolate specific Vision Transformer (ViT) components that disproportionately encode lexical information, thereby identifying the mechanistic source of TA. We further show that simple interventions applied directly to the identified circuits, without any additional training, can substantially improve robustness against Typographic Attacks in object classification. These interventions, such as selective adjustment of attention weights, also outperform both supervised and training-free defense methods. Our experiments demonstrate that applying the proposed intervention to the vision encoders of several state-of-the-art LVLMs yields substantial gains in Visual Question Answering accuracy under Typographic Attack interference on RIO-Bench. These results confirm both the efficacy and the generalizability of our mechanistic approach. Code is released at https://github.com/Liu-524/SamplingTAR.
Bohan Liu, Wenqian Ye, Guangzhi Xiong +3
Jul 2, 2026cs.LG

Adaptive Group-Based Counterfactual Explanations for Time-Series Rehabilitation Data

Counterfactual explanations (CEs) for multivariate time-series classifiers are often difficult to interpret in domains where experts reason in terms of semantic feature groups rather than individual channels. In rehabilitation movement analysis with multi-sensor inertial measurement units (IMUs), clinicians interpret motion through muscle-group and joint-segment abstractions; yet, most existing counterfactual methods operate at the channel level, producing scattered and biomechanically incoherent explanations. We propose a two-stage framework for group-based counterfactual generation in high-dimensional IMU data. We first show that Shapley-Adaptive (SA) group ranking preserves counterfactual validity but fails to enforce group-level sparsity, motivating the need for explicit group selection. We then introduce Learnable Gate (LG) methods, which incorporate trainable per-group relevance gates jointly optimized with perturbation masks. Experiments on the KneE-PAD rehabilitation dataset demonstrate that LG substantially improves modality-group sparsity compared to the channel-level M-CELS baseline while maintaining or improving validity, temporal smoothness, and generation efficiency. Exercise-specific analyses further show that group-structured counterfactuals yield concise, muscle-level corrective guidance aligned with clinical reasoning. Overall, the proposed framework enhances interpretability without sacrificing counterfactual quality, enabling more actionable explanations for rehabilitation movement analysis.
Emmanuel C. Chukwu, Rianne M. Schouten, Monique Tabak +1
Jul 2, 2026cs.AI

Profit-Based Counterfactual Explanations for Product Improvement: A Case Study of Manga Sales in Japan

Counterfactual explanation (CE) is widely used to enhance the interpretability of machine learning models and support data-driven decision-making based on model predictions. However, existing CE methods typically require two exogenously specified inputs: a desired output value (target) and a distance function that quantifies changes in explanatory variables. In regression settings, neither the validity of target specification nor the practical interpretation of the distance metric has been sufficiently addressed. Furthermore, most existing CE methods focus on altering predictions rather than optimizing a decision objective, even though real-world decision-making often requires explicit objective maximization. To address these limitations, we formulate CE as a profit maximization problem in management and marketing contexts and propose a framework termed profit-based counterfactual explanation (PBCE). PBCE eliminates the need for exogenous target specification by directly maximizing profit as the primary optimization objective. Concurrently, the distance term is reinterpreted as the cost of modifying product attributes, providing a clear and economically grounded interpretation.
Keita Kinjo, Takeshi Ebina
Jul 2, 2026cs.LG

X-LogSMask: Expand Transformer for Graph-Structured Data

Transformers have become general-purpose architectures, but their all-to-all self-attention is poorly matched to graph data, whose interactions are sparse, structured and multi-scale. Existing Graph Transformers address this mismatch through structural encodings, hybrid message-passing modules or learned attention constraints, often introducing additional complexity and limited interpretability. Here we introduce X-LogSMask, an explainable multi-head logarithmic structural mask that injects symmetrically normalized graph topology directly into attention logits. The logarithmic transform converts structural connectivity into a topology-aware gating signal, suppressing unsupported node interactions while preserving feature-dependent attention. By assigning different powers of the normalized adjacency matrix to different attention heads, X-LogSMask gives each head a defined structural radius and supports multi-hop information propagation within a single layer. We further show that a standard Transformer encoder can be interpreted as one-step message passing on a complete graph, motivating X-LogSMask as a topology-constrained alternative to unrestricted self-attention. Across 20 node-, edge- and graph-level benchmarks, Transformers equipped with X-LogSMask achieve state-of-the-art performance on 13 datasets and remain competitive in a lightweight one-layer configuration. These results show that simple, interpretable structural masks can make self-attention an effective graph-learning operator without changing the Transformer architecture. The code is available at https://github.com/LiLeyan-0120/X-LogSMask.
Leyan Li, Rennong Yang, Zhenxing Zhang +1
Jul 2, 2026cs.LG

Evolutionary Feature Engineering for Structured Data

Large language models are increasingly used as open-ended search operators in evolutionary optimization. We introduce Evolutionary Feature Engineering (EFE), a framework for using LLM-based evolution to discover preprocessing transformations for structured data. EFE represents transformations as Python programs with a standardized fit/transform interface, allowing them to be inserted directly into existing machine learning pipelines. During evolution, candidate programs are refined using dataset context, summary statistics, and downstream performance feedback on validation set. We instantiate EFE in two settings. For time-series forecasting, EFE-Time learns invertible, dataset-specific normalizations that improve off-the-shelf time-series foundation models. It reduces forecasting errors (MASE, WQL, MAE) 3% or more when averaged across datasets and improvements are as much as 19% on the COVID-Deaths dataset. Notably, these improvements occur with recent TSFMs such as Chronos-2. For tabular prediction, EFE-Tab evolves compact feature programs that add useful interpretable features and remove redundant ones, improving or matching existing LLM-based feature-engineering methods. We found EFE-Tab to be particularly effective on classical decision trees, where small sets of evolved features yield competitive accuracy while preserving interpretability. Overall, EFE demonstrates that LLM-based evolution can improve both accuracy and interpretability when automatically tackling structured data.
Ege Onur Taga, Yilin Zhuang, M. Emrullah Ildiz +4
Jun 30, 2026math.CT

A Category Theory Account of AI Identity

Artificial intelligence (AI) systems are routinely modified after deployment through retraining and changes in their environments. These transformations raise a metaphysical question: under what conditions does an AI system remain the same system over time or across deployments? Earlier work formulates synchronic and diachronic identity propositionally, by relating identity within a fixed AI system type to equality of trustworthiness levels. Such criteria specify when identity statements are true, but leave implicit the structure of the states compared, the transformations connecting them, and the temporal organization of persistence. We develop a category-theoretic formalization of AI identity. An AI system type is specified by a datum consisting of a techno-function, a trustworthiness profile, and a trustworthiness-level function. Profile-relative states are connected by admissible lifecycle paths, which are restricted to trustworthiness-level-preserving transformations and quotiented to obtain a reachability category. Temporally admissible functors represent AI system histories, while time-synchronous natural transformations compare realized histories. The formalization yields two categorical interpretations of the earlier AI identity criteria. A weak interpretation recovers identity as equality of trustworthiness level. A strong interpretation requires mutual trustworthiness-preserving reachability, expressed through state isomorphism or natural isomorphism of realized histories. Category theory therefore replaces a single AI identity relation with a structured hierarchy of diachronic and synchronic criteria. The resulting framework identifies identity-related preconditions for transferring responsible-AI claims, evidence, and governance procedures across versions or deployments, without treating categorical identity as sufficient by itself for such transfer.
Andrea Ferrario
Jun 30, 2026cs.LG

When to Truncate a Feature Ranking: A Residual-Overlap Stopping Rule for Subset Selection

Feature rankings are widely used in supervised feature selection because they are simple, scalable and easy to interpret. Variables are first ranked by a relevance score, and a subset is then obtained by retaining the top-ranked variables. Although the first stage has been extensively studied, the second is often governed by an arbitrary cardinality, an empirical threshold or cross-validation, without a direct interpretation. This raises a basic question: given a feature ranking, when is there enough accumulated class-separation evidence to stop selecting features? This paper develops a distributional framework for transforming supervised feature rankings into class-independent subsets through an explicit risk-calibrated stopping rule. For each variable and each pair of classes, marginal separation is measured by the Bhattacharyya coefficient between the corresponding class-conditional distributions. The proposed method selects a single global subset shared by all classes by retaining the shortest prefix of a ranking whose residual product overlap falls below a prescribed threshold for every relevant class contrast. We derive binary and multiclass Bayes-risk bounds for the labelled product marginal problem, and obtain prior-dependent and prior-free calibrations of the residual-overlap threshold from a target all-pairs risk level. An empirical comparison on high-dimensional genomic datasets illustrates that the rule can reduce tens of thousands of variables to a few dozen while maintaining predictive performance statistically comparable to the all-features baseline. As the stopping rule only requires one-dimensional marginal overlap estimates and scans a precomputed ranking, it is well suited to very high-dimensional settings where exhaustive subset search is infeasible and interpretable truncation of feature rankings is essential.
Jesus S. Aguilar-Ruiz
Jun 30, 2026cs.RO

A Large-Language-Model Supported Personalized Driving Framework for Lane Change in Highway Scenarios

Personalized driving can improve the user acceptance of automated driving systems. However, existing methods still provide limited support for translating natural-language driving preferences, especially when such preferences are expressed implicitly, into executable and distinguishable driving behaviors. This paper proposes a large language model (LLM)-supported personalized driving framework for highway lane-change scenarios. The framework maps natural-language driving commands to executable planning parameters in the open-source Apollo automated driving stack according to three driving styles: aggressive, normal, and conservative. To establish this mapping, candidate planning parameters are evaluated based on the resulting lane-change behaviors, and style-specific parameter sets are constructed through clustering and style-intensity ranking. For command interpretation, a retrieval dataset is constructed to support retrieval-augmented generation (RAG), enabling LLM-based interpretation of implicit user commands. Experimental results show that the derived parameter sets generate distinguishable personalized lane-change behaviors, while RAG consistently improves preference interpretation, particularly for implicit commands. These results indicate the potential of integrating LLM-based natural-language interaction with Apollo to support personalized lane-change behavior generation. The source code and the relevant datasets are available at: https://github.com/ftgTUGraz/LLM-Personalized-Driving.
Dong Bi, Yongqi Zhao, Paul Kovacevic +4
Jun 29, 2026cs.AI

Neuro-Bayesian-Symbolic Residual Attention Shallow Network: Explainable Deep Learning for Cybersecurity Risk Assessment

We introduce the Neuro-Bayesian-Symbolic Residual Attention Shallow Network (NBS-RASN), a hybrid neural architecture for explainable cybersecurity risk assessment in open-source ecosystems. Unlike deep models that trade interpretability for accuracy, our shallow network encodes domain knowledge, causal reasoning, and expert judgment as differentiable components. It uses 80 interpretable neurons across 12 layers, including a gatekeeper that enforces five epistemological axioms - precision, causality, falsifiability, transparency, and completeness - as hard constraints before propagation. Despite limited depth, the network exhibits deep-learning traits via residual attention and feedback loops, learning complex risk patterns without becoming a black box. It produces fully decomposable scores: a deterministic weighted component plus an expert adjustment, with each adjustment traceable to named amplifiers (blast radius, propagation speed, structural nature, default exposure, exploitation pattern, institutional criticality). We validate on 20 open-source projects covering all OWASP Top 10:2025 categories and language risk classes, achieving confidence scores of 0.79-0.97, and show that explainability is guaranteed by design, not by a training algorithm. This challenges the assumption that deep learning requires deep networks, proving that shallow networks with deep reasoning can outperform opaque models in high-stakes cybersecurity, where interpretability is essential.
Nicolaie Popescu-Bodorin, Madeleine Togher
Jun 29, 2026cs.LG

Towards Generalizable and Evidential Nuclear Magnetic Resonance-Based Molecular Structure Elucidation via Large Language Model Agent

Nuclear Magnetic Resonance (NMR) spectroscopy is the gold standard for molecular structure elucidation, yet interpreting complex spectra for unknown molecules remains a bottleneck reliant on human expertise. While artificial intelligence has advanced this field, current methods face a critical trade-off: database retrieval cannot identify novel scaffolds, while de novo molecular structure elucidation models operate as black boxes, lacking the atom-level interpretability required for rigorous scientific validation. Here, we present NMRAgent, an evidential reasoning agent powered by large language models (LLMs) that bridges this gap by integrating specialized spectral analysis tools with chemical knowledge graphs. Unlike previous approaches, NMRAgent mimics the deductive reasoning of human experts: it takes experimental NMR spectra and molecular formula as input, plans the elucidation process, proposes candidate structures, verifies peak-atom consistency, and refines misaligned substructure through formula-aware fragment optimization. Enabled by its evidential reasoning, NMRAgent outperforms state-of-the-art methods, improving top-1 accuracy by 46.5% and Tanimoto similarity by 0.502 on a scaffold-split benchmark with novel scaffolds in the test set. Besides, we demonstrate the agent's practical utility by elucidating the structures of two previously unknown natural products isolated from Hydrangea davidii and Vitex trifolia, and by correcting structural misassignments in established literature. By combining high-accuracy prediction with transparent and evidence-based reasoning, NMRAgent establishes a new paradigm for interpretable AI in analytical chemistry.
Zheng Fang, Chen Yang, Yusen Tan +9
Jun 28, 2026cs.RO

Position: Vision-Language-Action Models Cannot Be Verified to Perform Physical Reasoning

Vision-Language-Action (VLA) systems, built on pretrained vision-language models (VLMs), have shown rapidly improving performance on robot manipulation benchmarks. These gains are commonly interpreted as evidence that semantic representations learned from internet-scale data transfer to physical execution generalization. This position paper argues that the assumption underlying this interpretation -- that semantic generalization is sufficient to support physical action decisions -- has not been independently verified and cannot be tested under current evaluation protocols. We support this claim by decomposing VLA policies into semantic mapping and physical action decision, and showing that task success rate -- the dominant evaluation metric -- cannot distinguish between these two sources of capability. As a result, improvements in benchmark performance are consistent with multiple competing explanations, including semantic matching, distributional overlap, and genuine physical generalization. We further argue that this identifiability gap has been reinforced through narrative drift, whereby successive systems inherit and strengthen prior interpretations of performance gains without isolating the underlying causal mechanism. To address this limitation, we propose a research direction based on evaluation designs that introduce controlled variation to separately measure semantic and physical generalization. Such designs make it possible to causally attribute performance without requiring access to model internals, and to empirically assess the role of VLM backbones as semantic interfaces rather than implicit sources of physical competence. Our goal is not to refute the role of VLMs in robotics, but to clarify the conditions under which claims of physical generalization can be meaningfully evaluated.
Taozhao Chen, Ian Manchester, Huaming Chen
Jun 26, 2026cs.CV

EchoSonar-R: A Multi-View Reasoning-Enabled Model for Disease Classification and Report Generation in Echocardiography

Echocardiography is the most widely used non-invasive cardiac imaging modality, providing essential information for cardiovascular diagnosis. Interpreting an echocardiogram requires synthesizing complementary evidence across multiple heart views to identify abnormalities and produce structured clinical reports. While recent efforts focus on improving classification performance, most models lack explicit diagnostic reasoning and spatially grounded anatomical evidence, limiting clinician trust. We present EchoSonar-R, a multi-view reasoning-enabled vision-language model that jointly performs multi-label disease classification and report generation from echocardiography studies. EchoSonar-R combines a spatiotemporal video encoder with a structure-aware cardiac detector that provides spatially grounded anatomical cues to improve interpretability and clinician trust during cross-view reasoning. EchoSonar-R is trained in two stages: supervised fine-tuning (SFT) on reasoning-annotated targets, followed by Group Relative Policy Optimization (GRPO) with task-specific rewards that jointly align classification and report generation within a unified reinforcement-learning framework. Across a private multi-view dataset and two public benchmarks, EchoSonar-R improves macro balanced accuracy by 17.1% on the private set and 6.1% on MIMICEchoQA over the strongest baseline, achieves a GREEN clinical faithfulness score of 0.800, and produces interpretable reasoning traces grounded in multi-view visual evidence.
Darya Taratynova, Ahmed Aly, Numan Saeed +1
Jun 25, 2026cs.CV

Bridging Vision and Language Concepts through Optimal Transport Semantic Flow

Concept Bottleneck Models (CBMs) promise transparent reasoning by predicting through human-interpretable concepts, yet their effectiveness fundamentally depends on how well visual and textual representations are aligned or matched. Existing vision-language CBMs often rely on pre-aligned encoders or global cosine similarity, which obscures fine-grained concept localization and fails to reflect true semantic geometry. In this work, we rethink concept alignment as a dynamic cross-modal transport process instead of static projection and propose the Optimal Transport Flow Concept Bottleneck Model (OTF-CBM). It first learns a data-driven semantic cost via Inverse Optimal Transport to measure cross-modal distances, and then performs unbalanced optimal-transport-based flow matching to model semantic transitions between visual patches and textual concepts. With velocity-based concept activation, OTF-CBM captures interpretable geometric relations without ODE integration. Experiments further show that OTF-CBM achieves superior classification accuracy and concept faithfulness, offering a new geometric and dynamical perspective for interpretable cross-modal reasoning.
Chenyang Zhang, Anqi Dong, Guangming Zhu +4
Jun 25, 2026cs.LG

AIGP: An LLM-Based Framework for Long-Term Value Alignment in E-Commerce Pricing

Traditional dynamic pricing models in large-scale e-commerce suffer from limited interpretability, poor utilization of unstructured information, and misalignment with long-term business objectives such as cumulative Gross Merchandise Value (GMV), Return on Investment (ROI) and milestone achievement. We propose AIGP, a novel framework that leverages a Large Language Model (LLM) prompted with domain knowledge, structured data and textual context to make interpretable, knowledge-aware pricing decisions. For efficient deployment while maintaining high-quality outputs, we employ supervised fine-tuning for knowledge distillation. Central to AIGP is the Long-Term Value Estimator (LTVE), trained via offline reinforcement learning on historical data, which serves as a reward model to score candidate pricing actions and select preference pairs for Direct Preference Optimization (DPO), thereby aligning the pricing policy with long-term business objectives. Extensive offline evaluations and large-scale online A/B tests on Tao Factory demonstrate that AIGP achieves significant improvements: +13.21% in GMV, +7.59% in ROI, and +8.20% in milestone achievement rate over 14 days compared to the production baseline, while simultaneously providing interpretable and transparent pricing rationales.
Chennan Ma, Yanning Zhang, Siqi Hong +3
Jun 24, 2026cs.LG

Topology-Informed Neural Networks for Flood Detection in Optical and Synthetic Aperture Radar Imagery

Floods frequently impact regions around the world. Rapid and accurate flood detection is crucial for emergency response and timely mitigation of human and economic loss. The expanding availability of satellite data and advances in artificial intelligence have enhanced monitoring of environmental hazards, but many flood events remain challenging to detect because cloud cover obscures optical satellite imagery. Rambour et al. introduced the SEN12-FLOOD dataset and extracted per-image features using a ResNet-50 convolutional neural network backbone, then fed these features into a gated recurrent unit network to show that temporal information can substantially improve accuracy compared to single-image baselines. More recently, Chamatidis et al. showed that a vision transformer can achieve strong performance with popular convolutional architectures. However, these models typically function as opaque black boxes, making it difficult to interpret their decision boundaries, learned features, and internal reasoning, especially in safety-critical domains like remote sensing. In contrast, topological data analysis (TDA) provides a mathematically grounded framework for capturing global structural features of data. TDA has emerged as a powerful tool for analyzing complex imagery, especially imagery with geometrically interpretable structures, of which floods are a prime candidate. In this work, we systematically evaluate topological descriptors for flood detection using the open-source SEN12-FLOOD dataset. By extracting topological features from each image and incorporating them into neural networks, we demonstrate that topological descriptors carry meaningful flood signals independently and complement existing networks to yield more robust and interpretable flood detection systems.
Sophia Li, Max Zhao, Raghu G. Raj +1
Jun 23, 2026cs.AI

Detecting and Controlling Sycophancy with Cascading Linear Features

Interpreting and controlling model behaviors through activation steering methods requires many pairs of contrastive samples that clearly exhibit desired or undesired behavior. These data pairs determine the degree to which interpretability frameworks can reliably detect model features responsible for a behavior, and therefore the ability to steer models toward or away from such behavior. In this work, we present an iterative data generation pipeline that isolates cascading linear features responsible for a behavior. Specifically, we show how moving beyond simple binary pairs of samples, and instead isolating samples that show degrees of features that scale linearly with behavior, allows for better disentanglement of features. We focus on detecting and steering away from sycophancy -- the tendency of language models to prioritize user validation. We demonstrate that sycophancy features discovered through cascading samples form linearly separable subspaces, and allow for selection of model activations that more clearly correspond to the desired behavior than baseline approaches. We also evaluate their ability to enable detection, deterministic scoring, and robust steering, and see that they either match or outperform LLM-as-a-judge and system prompting baselines while providing lower computational demand and more interpretability guarantees. Code & Data: https://cascading-feats.github.io/
Maty Bohacek, Rishub Jain, Nicholas Dufour +3
Jun 23, 2026cs.LG

Don't Go Breaking My LLM: The Impact of Pruning Attention Layers on Explanation Faithfulness and Confidence Calibration

Pruning Large Language Models (LLMs) reduces memory and inference costs by removing parts of the network, producing smaller models that retain most of their accuracy. As attention layers are the most resource-intensive parts of LLMs, pruning them is a promising compression strategy. Prior work shows that up to 33% of attention layers can be pruned with minimal accuracy loss. Nevertheless, the impact of attention pruning on model interpretability, specifically faithfulness and confidence calibration, remains unstudied. To address this gap, we study how pruning attention layers affects explanation faithfulness and confidence calibration across five LLMs and eight datasets. While the pruned models often maintain high accuracy, we find that their faithfulness and calibration often degrade. Notably, faithfulness and calibration can fluctuate significantly, even when accuracy remains stable, highlighting a misalignment between model confidence, interpretability, and accuracy. Our findings suggest that layer pruning can affect LLMs' interpretability and reliability in ways not captured by accuracy and efficiency measures alone. We recommend including explainability and calibration metrics when evaluating pruned models.
Pietro Tropeano, Maria Maistro, Tuukka Ruotsalo +1
Jun 23, 2026cs.RO

RE4: Transformation-aware Imitation of Object Interactions Using Manipulation Modes

Object interaction tasks have been a focus of advances in imitation learning. End-to-end methods, dominated by diffusion and flow-based variants have shown leaps in performance while sacrificing interpretability. Object-centric and pose-informed variants have had a role in learning from demonstration in manipulation tasks. In this paper, we revisit a few modern imitation learning benchmarks for object interactions, with the aim of composing a framework that repurposes principled theories of manipulation, preserving both performance and interpretability. For image observations, lightweight training is proposed for model-free pose estimation of the target object, using self-supervision over the demonstration data available for imitation learning. This information is then used to inform a manipulation mode-aware retrieval of a demonstration, a mode-aware transformation, a replan step that connects to the retrieval point while preserving mode constraints, and finally rolling out the transformed demonstration. These compose four key steps of the proposed RE4 framework, evaluated over state-based and image-based benchmarks in Push-T and Robomimic. An adversarial benchmark that evaluates sparse data regions of image-based Push-T showcases the robustness, further bolstered by indications from low-data regime experiments. The current work shows promise in using simple interpretable building blocks to learn manipulation skills.
Arsh Chawla, Rahul Shome
Jun 23, 2026cs.SD

What Does a Pathological Speech Assessment Model Know about Acoustic Features? A Case Study on Oral and Oropharyngeal Cancer Patients

This work investigates the interpretability of a Wav2Vec 2.0based speech intelligibility assessment model for oral and oropharyngeal cancer patients through canonical correlation analysis. By measuring the correlation between the model embeddings and eGeMAPS low-level descriptors (LLDs) as an interpretable reference, we analyze how acoustic information is encoded across the model layers. The analysis is conducted at two levels: individual LLDs layer-wise, and group-level: prosodic, spectral, and voice quality. Results show that the learned representations are most strongly correlated with spectral and prosodic features, with the first MFCC coefficient yielding the highest correlations across all layers. At the group level, spectral and prosodic groups achieve correlations of 0.77 and 0.71 respectively, while voice quality reaches 0.65. Beyond model interpretability, this work also offers practical guidance on acoustic feature selection for pathological speech assessment.
Tuan Nguyen, Corinne Fredouille, Alain Ghio +2
Jun 23, 2026cs.SE

AutoSpec: Safety Rule Evolution for LLM Agents via Inductive Logic Programming

Large language model (LLM) agents increasingly automate complex tasks by integrating language models with external tools and environments. However, their autonomy poses significant safety risks: agents may execute destructive commands, leak sensitive data, or violate domain constraints. Existing safety approaches face a fundamental tradeoff: hand-crafted rules are interpretable but brittle, with overly conservative rules blocking safe operations (high false positives) while permissive rules miss unsafe behaviors (high false negatives). Neural classifiers lack the interpretability required for safety-critical deployments. We present AutoSpec, a framework that automatically evolves deployed expert-designed safety rules from user safe/unsafe annotations through counterexample-guided inductive synthesis (CEGIS) guided by inductive logic programming (ILP). Starting from the expert rules and a stream of annotated traces, AutoSpec iteratively evaluates rules, mines false-positive and false-negative counterexamples, uses ILP to learn which predicates discriminate them, generates candidate rule edits, and verifies candidates to select the best revision. The key insight is that ILP efficiently identifies predicates that appear frequently in false negatives but rarely in false positives (or vice versa), dramatically pruning the exponential search space of rule edits. This continues until convergence, producing interpretable rules that balance precision and recall. We evaluate AutoSpec on 291 execution traces spanning code execution and embodied agent domains. AutoSpec raises rule F1 to 0.98 and 0.93 across the two domains, achieving up to 94% false positive reduction while maintaining high recall, and converges within 4-5 iterations. The ILP-guided approach achieves up to 4.8x higher F1 than heuristic CEGIS. The learned rules are human-readable, auditable, and generalize to unseen scenarios.
Pingchuan Ma, Zhaoyu Wang, Zimo Ji +5
Jun 22, 2026cs.AI

PsyBridge: A Hybrid Intelligent Framework for Multi-Dimensional Mental Health Assessment and Decision Support

Mental health assessment commonly relies on isolated screening instruments or data-driven models that often lack interpretability and multi-dimensional integration. Existing approaches frequently focus on individual indicators such as depression or anxiety while providing limited support for comprehensive and explainable decision-making. To address this limitation, this study proposes PsyBridge, a hybrid intelligent decision-support framework designed for multi-dimensional mental health assessment through the integration of clinically validated screening tools, cognitive evaluation, and personality profiling within a unified architecture. The proposed framework incorporates PHQ-9 and GAD-7 assessments alongside cognitive and behavioural indicators using a modular design and a weighted aggregation mechanism to generate interpretable mental health risk classifications and recommendations. To evaluate the framework, a semi-synthetic dataset consisting of 500 patient profiles representing varying severity levels was constructed based on clinically grounded score distributions. Experimental results demonstrate that PsyBridge achieves an overall accuracy of 0.84, outperforming standalone PHQ-9 and GAD-7 assessments while improving precision, recall, and F1-score. Sensitivity analysis and ablation studies further indicate that integrating cognitive and personality components contributes to more stable classification performance and reduces inconsistencies in moderate-risk prediction. The findings suggest that PsyBridge provides a scalable and interpretable approach for AI-assisted mental health decision support, particularly within digital healthcare and telehealth environments.
Sunil Wanjari, Manish Thakre, Aayushi Asole +4
Jun 22, 2026cs.LG

Physiology-Aware CNN and Zero-Shot Multimodal LLMs for ECG Image Classification: A Comparative Study

Multimodal large language models (LLMs) are increasingly adopted to interpret 12-lead ECG images, though the interpretations often lack validation. However, ECG image understanding significantly differs from general images as it depends on precise waveform morphology, lead relationships and accurate interval measurements. This study investigated whether zero-shot multimodal LLMs can reliably distinguish normal and abnormal ECG images and, in parallel, evaluated CNN-based models for clinically grounded references. Standard 12-lead ECG recordings were rendered as single-page images for a binary normal-abnormal classification task. Three prominent LLMs (GPT-5.2, GPT-4.1, and Gemini-2.5 Pro) were tested using a fixed zero-shot prompt across multiple runs. In parallel, a physiology-aware CNN-based model was developed with the capability to aggregate features from the predefined anatomical lead groups. The model was compared with ResNet18, DenseNet121, VGG16 baselines, and all the models were evaluated on an internal test set and external PTB-XL dataset. Across seeds, CNN-based models demonstrated stable discrimination, with average internal ROC-AUC of 0.92-0.94, and external ROC-AUC of 0.85-0.86. The proposed LeadGroupECG model significantly improved over its backbone internally without compromising external generalization. It remained competitive with other baselines, while consistently highlighting anatomical lead-group contributions. In contrast, zero-shot LLM discrimination remained near-chance (ROC-AUC around 0.5). The PR-AUC improved slightly when ECGs used a grid-based calibration background compared with the grid-free ECGs. Although multimodal LLMs can generate reasonable ECG narratives, their zero-shot diagnostic discrimination remains limited. Therefore, clinically framed, domain-specific architectures remain essential for AI-based ECG interpretation.
Khalil Ahammad, Derek Abbott, Mohsen Dorraki
Jun 20, 2026cs.LG

From Handcrafted Features to Functional Edge Learning: Evolution of EEG Seizure Detection Frameworks

Electroencephalogram (EEG) analysis remains the clinical gold standard for epilepsy diagnosis and seizure detection. While Deep Learning (DL) has significantly advanced automated EEG interpretation, its transition from controlled experimental settings to routine clinical deployment is severely bottlenecked by fundamental architectural flaws. Standard DL models operate as opaque black-boxes lacking clinical interpretability, demand massive amounts of balanced annotated data, and incur steep computational costs incompatible with resource-constrained wearable or implantable neuromodulation devices. This paper presents a comprehensive review of these prevailing limitations and explores Kolmogorov-Arnold Networks (KANs) as a emerging paradigm for EEG-based seizure detection. By replacing the fixed activation functions of traditional neurons with flexible, learnable functions along the network's connections, KANs bridge the critical gap between predictive accuracy and mathematical transparency. We systematically analyze how KAN architectures resolve the shortcomings of traditional DL-based models by offering exceptional parameter efficiency, inherent interpretability for physician trust, and robust performance under data scarcity. Ultimately, this review establishes KANs not merely as an incremental algorithmic update, but as a fundamental paradigm shift necessary to actualize next-generation, patient-specific, and thoroughly transparent clinical EEG monitoring systems.
Sepideh Kheirollahi, Mohammad Rasoul Roshanshah
Jun 18, 2026cs.CL

HydraHead: From Head-Level Functional Heterogeneity to Specialized Attention Hybridization

The quadratic complexity of attention poses a critical bottleneck for long-context processing, spurring interest in hybrid attention designs. Most open-source hybrid models adopt a layer-wise strategy. Yet, prior work has noted the inherent difficulty of integrating Linear Attention (LA) with Full Attention (FA), suggesting that the design space of attention hybridization remains underexplored. To probe this space, we conduct interpretability analysis and observe that layers exhibit block-wise functional similarity, while individual heads within the same layer display distinct functional specialization despite sharing input features. This head-level heterogeneity suggests that the head dimension provides a natural and principled granularity for fusing heterogeneous attention signals. Building on this insight, we introduce HydraHead, a novel architecture that hybridizes FA and LA along the head axis. HydraHead features two key innovations: (1) an interpretability-driven selection strategy that identifies retrieval-critical heads and preserves FA only for them, and (2) a scale-normalized fusion module that reconciles the distributional gap between FA and LA head outputs. By leveraging a three-stage transfer pipeline with parameter reuse and distillation, we achieve high-performance hybrid models with minimal training overhead. Under a unified training setup, HydraHead outperforms other hybrid designs in long-context tasks while maintaining strong general reasoning. With interpretability-driven head selection, it matches a 3:1 layer-wise hybrid's long-context performance at a 7:1 LA-to-FA ratio. Crucially, trained on only 15B tokens, HydraHead achieves over 69% improvement over the baseline at 512K context length, approaching Qwen3.5, a leading model of comparable size with a native context length of 256K. This highlights the significant scaling potential of head-level hybridization.
Zhentao Tan, Wei Chen, Jingyi Shen +4
Jun 18, 2026cs.CY

Measuring Biological Capabilities and Risks of AI Agents

This paper addresses a rapidly emerging policy challenge: how to generate and interpret credible evidence about the biological capabilities and risks of AI scientists, or agentic AI systems capable of autonomously or collaboratively performing multi-step scientific tasks. As these systems enter real research workflows, decision-makers increasingly face evaluation results whose meaning depends on underlying design choices that are often implicit or under-documented. We synthesize current evidence on AI-enabled biological risks and introduce biological agentic evaluations as a promising, but interpretation-sensitive, tool for assessing these systems. Our central contribution is a set of practical, experience-grounded considerations -- drawing from our own evaluations -- that show how choices around defining, designing, running, scoring, and documenting evaluations materially shape what results do and do not imply about risk. The analysis is intended to help policymakers interpret biological evaluation outputs with appropriate caution; guide public and private funders toward high-leverage investments in AI-biology evaluation research; and support biosecurity practitioners assessing emerging AI systems. A secondary audience includes researchers designing or conducting agentic evaluations within frontier AI labs, AI providers, scientific institutions, and third-party evaluation organizations.
Patricia Paskov, Jeffrey Lee, Kyle Brady +1
Jun 18, 2026cs.CV

HypOProto: Hyperbolic Ordinal Prototypes for Left Ventricular Filling Pressure Classification

Echocardiography (echo) is a widely used imaging modality for assessing cardiac function, with Left Ventricular Filling Pressure (LVFP) serving as a critical physiological marker for conditions such as heart failure. Standard LVFP classification into normal \emph{vs} elevated categories relies on the Doppler-derived E/e′E/e' ratio, which is operator-dependent and often unavailable in resource-limited settings, motivating methods that infer LVFP directly from B-mode echo. Existing deep learning approaches achieve high performance but remain largely black-box, limiting clinical interpretability. We propose HypOProto, a hyperbolic, ordinal prototype-based framework for interpretable LVFP classification using a frozen, explainable foundation model backbone. HypOProto arranges prototypes along the physiological E/e′E/e' scale, placing borderline cases near the hyperboloid root where small angular differences separate similar cases, while normal and elevated cases occupy outward positions reflecting increasing diagnostic certainty. This hyperbolic geometry encodes clinically meaningful ordinal relationships and improves interpretability. We also introduce a novel Hyperbolic Prototype Angular Separation (HyperPAS) loss, enforcing inter-class prototype separation in hyperbolic space. HypOProto achieves SOTA performance while maintaining transparency, and highlights clinically relevant regions in visualizations. This work represents the first prototype-based framework for LVFP classification in echo. Our code can be found at https://github.com/DeepRCL/HypOProto.
Victoria Wu, Nima Hashemi, Hooman Vaseli +3
Jun 16, 2026cs.HC

SketchXplain: Intuitive Visual Explanations of Image Classifiers with Sketches

Saliency map visualizations explain image-based AI predictions by pointing to regions, but these are often unintuitive and semantically unclear, leaving an interpretability gap. We argue that AI explanations should be intuitive -- coherent to user knowledge, yet simple and selective to accelerate interpretation. Inspired by artistic drawings, we propose SketchXplain to generate sketch-based visual explanations for intuitive image-based explainable AI (XAI). Combining techniques in saliency maps, concept-bottleneck models, and sketch optimization, SketchXplain integrates saliency to select coherent observation artifacts, concepts for knowledge coherence, cues to represent them, and abstraction for simplicity. Evaluating on face expression recognition, modeling and user studies showed that SketchXplain supported quicker interpretation with more aligned visualizations than saliency maps or simple drawings. Further evaluation on skin lesion diagnosis found that SketchXplain more coherently visualized disease symptoms, better supporting lay diagnosis. Thus, this work illustrates the value of sketches for intuitive, simple, coherent, and quick image-based XAI visualizations.
Wencan Zhang, Mario Michelessa, Xuejun Zhao +1